BLASTX nr result
ID: Ephedra26_contig00017380
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00017380
(520 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17073.1| unknown [Picea sitchensis] 86 4e-15
ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Rici... 86 7e-15
gb|ACN40904.1| unknown [Picea sitchensis] 84 1e-14
gb|AFK35896.1| unknown [Lotus japonicus] 84 2e-14
ref|XP_004296864.1| PREDICTED: RING-H2 finger protein ATL2-like ... 84 3e-14
ref|NP_001066681.1| Os12g0432600 [Oryza sativa Japonica Group] g... 84 3e-14
gb|ABK26617.1| unknown [Picea sitchensis] 84 3e-14
gb|AFW70296.1| putative RING zinc finger domain superfamily prot... 83 3e-14
ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 83 4e-14
ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citr... 83 4e-14
ref|XP_006298704.1| hypothetical protein CARUB_v10014799mg [Caps... 82 6e-14
emb|CBI17870.3| unnamed protein product [Vitis vinifera] 82 6e-14
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like... 82 6e-14
ref|XP_006844232.1| hypothetical protein AMTR_s00006p00267830 [A... 82 1e-13
tpg|DAA47756.1| TPA: putative RING zinc finger domain superfamil... 82 1e-13
ref|XP_003521836.1| PREDICTED: RING-H2 finger protein ATL3 [Glyc... 82 1e-13
dbj|BAK03766.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 1e-13
ref|NP_001131506.1| uncharacterized protein LOC100192844 precurs... 82 1e-13
ref|XP_006357148.1| PREDICTED: RING-H2 finger protein ATL3-like ... 81 1e-13
gb|ESW11053.1| hypothetical protein PHAVU_009G261400g [Phaseolus... 81 1e-13
>gb|ABR17073.1| unknown [Picea sitchensis]
Length = 187
Score = 86.3 bits (212), Expect = 4e-15
Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Frame = +1
Query: 181 MAAQISQFLSWVLLMGLAIVVALSLWYFWNHLPSSTKRVR--------------GLSHSD 318
+AA +S L L + ++V LW W + R R GLS +D
Sbjct: 7 LAAMMSLLL---LCAAIGVMVLAYLWLVWYVSLHQSLRQRPLEDNGNGKPPKQQGLSEAD 63
Query: 319 LKGLSTMVFQSHKDEEDPE-----ECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRR 483
L+ L T+ + K+EE E ECAVCL +F GD CR++P+CSH FHV CAD WL +
Sbjct: 64 LQRLPTI--ECCKEEEGDERTGNAECAVCLEAFQSGDRCRVIPVCSHAFHVQCADAWLSK 121
Query: 484 HSTCPLCRCS 513
S CPLCR S
Sbjct: 122 RSVCPLCRRS 131
>ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Ricinus communis]
gi|223526251|gb|EEF28567.1| RING-H2 finger protein
ATL1M, putative [Ricinus communis]
Length = 281
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 21/122 (17%)
Frame = +1
Query: 214 VLLMGLAIVVALSL---WYFWN------------------HLPSSTKRVRGLSHSDLKGL 330
+L M + V+ L L W++W P+ RGL S L+ L
Sbjct: 23 ILFMVVVFVLLLHLYAKWFWWRIEEPTSPPHSRRNRRRFVFTPAQDPVRRGLDMSVLRSL 82
Query: 331 STMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRC 510
++FQS +D +D ECAVCL + G+ RL+P C+H FHV C D W + HSTCPLCR
Sbjct: 83 PVVIFQS-EDFKDGLECAVCLSEIAQGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRN 141
Query: 511 SV 516
SV
Sbjct: 142 SV 143
>gb|ACN40904.1| unknown [Picea sitchensis]
Length = 218
Score = 84.3 bits (207), Expect = 1e-14
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
Frame = +1
Query: 214 VLLMGLAIVVALSLWYFW----NHLP--------SSTKRVRGLSHSDLKGLSTMVFQSHK 357
+L G+ + VA+ LW W N+ P + +GLS +DL+ L T+ Q +
Sbjct: 48 LLCAGMGMGVAVYLWLVWYVSLNNRPRQRASEDNGKPHKHQGLSEADLQRLPTIECQEEE 107
Query: 358 DEEDP-----EECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCS 513
ECAVCL F GD CR++P CSH FHV CAD WL + S CP+CR S
Sbjct: 108 SHAGDGGGGDAECAVCLEVFQSGDRCRVIPACSHAFHVHCADAWLSKRSVCPICRRS 164
>gb|AFK35896.1| unknown [Lotus japonicus]
Length = 286
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 280 SSTKRVR-GLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHV 456
S +R R GL S L+ L +VFQS +D +D ECAVCL G+ RL+P C+H FHV
Sbjct: 66 SEPRRPRTGLDPSVLRSLPVVVFQS-QDFKDGLECAVCLSELDEGEKARLLPKCNHGFHV 124
Query: 457 SCADQWLRRHSTCPLCRCSV 516
C D W + HSTCPLCR SV
Sbjct: 125 DCIDMWFQSHSTCPLCRTSV 144
>ref|XP_004296864.1| PREDICTED: RING-H2 finger protein ATL2-like [Fragaria vesca subsp.
vesca]
Length = 288
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/73 (49%), Positives = 42/73 (57%)
Frame = +1
Query: 298 RGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWL 477
RGL S LK L V+ S E ECAVCL F + R++P C H FH+ C D W
Sbjct: 92 RGLDESVLKSLPVFVYDSKTHPEAVLECAVCLSEFEENETGRVLPKCKHSFHIECIDMWF 151
Query: 478 RRHSTCPLCRCSV 516
HSTCPLCRC+V
Sbjct: 152 HSHSTCPLCRCAV 164
>ref|NP_001066681.1| Os12g0432600 [Oryza sativa Japonica Group]
gi|77554889|gb|ABA97685.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113649188|dbj|BAF29700.1| Os12g0432600 [Oryza sativa
Japonica Group] gi|215766317|dbj|BAG98545.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 185
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Frame = +1
Query: 232 AIVVALSLWYFW--------------NHLPSSTKRVRGLSHSDLKGLSTMVFQSHKDEED 369
A+++A + W+ W +H P++ RGLS D++ + ++
Sbjct: 60 AVLLAAAGWFTWYYFGAAPAPPVLPDHHQPAAPVEARGLSQEDIEAIPAFEYRRGSSGSG 119
Query: 370 PEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCSVV 519
+CAVC+ + GD R +P C H FH C D WLR H+TCP+CR VV
Sbjct: 120 VAQCAVCIAAVKDGDTVRRLPACGHAFHAPCVDGWLRDHATCPMCRADVV 169
>gb|ABK26617.1| unknown [Picea sitchensis]
Length = 186
Score = 83.6 bits (205), Expect = 3e-14
Identities = 52/129 (40%), Positives = 69/129 (53%), Gaps = 26/129 (20%)
Frame = +1
Query: 205 LSWVLLM-GLAIVVALSLWYFW----------NHLPSS----TKRVRGLSHSDLKGLSTM 339
LS++LL G+ VV + LW W PS ++ +GLS +DL+ L T+
Sbjct: 10 LSFLLLCAGIGGVVLVYLWLIWYVSLHEMSNRGRRPSEGNGKAQKQQGLSAADLQRLPTI 69
Query: 340 VFQSHKDEEDPE-----------ECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRH 486
+ K+EE E ECAVCL F GD CR++P+CSH FHV CAD WL +
Sbjct: 70 --ECGKEEEGEERSSGSRGGGNAECAVCLEIFQNGDRCRVIPVCSHAFHVQCADAWLSKC 127
Query: 487 STCPLCRCS 513
S CP+CR S
Sbjct: 128 SVCPICRRS 136
>gb|AFW70296.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 247
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Frame = +1
Query: 205 LSWVLLMGLAIVVALSLWYFWNHLPS---------STKRVRGLSHSDLKGLSTMVFQSHK 357
+S+ L+ + +V+ WY S KR +GL + L V+Q K
Sbjct: 82 ISFGSLLAILLVMCAIRWYLVRRSASRDATAAAELEKKRSKGLGADAIAALPEFVYQKEK 141
Query: 358 DEEDPEE-------CAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCSV 516
D D EE CAVCLG+ GD +P C H FH C D WLR HSTCP+CR V
Sbjct: 142 DANDGEEEEERELECAVCLGAMVHGDAALRLPPCMHVFHRGCVDVWLREHSTCPVCRAEV 201
Query: 517 V 519
V
Sbjct: 202 V 202
>ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Citrus sinensis]
Length = 428
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +1
Query: 283 STKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSC 462
ST R G+ + ++ L F S K + ECAVCL F ++ RL+P C H FH+SC
Sbjct: 84 STSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISC 143
Query: 463 ADQWLRRHSTCPLCRCSV 516
DQWL +HS+CPLCR V
Sbjct: 144 IDQWLEKHSSCPLCRLKV 161
>ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citrus clementina]
gi|557554472|gb|ESR64486.1| hypothetical protein
CICLE_v10010254mg [Citrus clementina]
Length = 415
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +1
Query: 283 STKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSC 462
ST R G+ + ++ L F S K + ECAVCL F ++ RL+P C H FH+SC
Sbjct: 71 STSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISC 130
Query: 463 ADQWLRRHSTCPLCRCSV 516
DQWL +HS+CPLCR V
Sbjct: 131 IDQWLEKHSSCPLCRLKV 148
>ref|XP_006298704.1| hypothetical protein CARUB_v10014799mg [Capsella rubella]
gi|482567413|gb|EOA31602.1| hypothetical protein
CARUB_v10014799mg [Capsella rubella]
Length = 163
Score = 82.4 bits (202), Expect = 6e-14
Identities = 30/72 (41%), Positives = 48/72 (66%)
Frame = +1
Query: 301 GLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLR 480
GL + ++ L ++F+ +E+ EEC +CLG F GD +++P CSH +H C D+WL+
Sbjct: 81 GLDPATIRSLPVVLFRREAADEEEEECCICLGGFEEGDKMKVLPPCSHCYHCECVDRWLK 140
Query: 481 RHSTCPLCRCSV 516
+ S+CPLCR S+
Sbjct: 141 KESSCPLCRVSI 152
>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 274 LPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFH 453
L S+ ++ G+ + ++ L F S + ++D ECAVCL F P ++ RL+P C H FH
Sbjct: 94 LSSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFH 153
Query: 454 VSCADQWLRRHSTCPLCRCSV 516
V C D WL HSTCPLCR V
Sbjct: 154 VECVDTWLDAHSTCPLCRYRV 174
>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
Length = 404
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 274 LPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFH 453
L S+ ++ G+ + ++ L F S + ++D ECAVCL F P ++ RL+P C H FH
Sbjct: 94 LSSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFH 153
Query: 454 VSCADQWLRRHSTCPLCRCSV 516
V C D WL HSTCPLCR V
Sbjct: 154 VECVDTWLDAHSTCPLCRYRV 174
>ref|XP_006844232.1| hypothetical protein AMTR_s00006p00267830 [Amborella trichopoda]
gi|548846631|gb|ERN05907.1| hypothetical protein
AMTR_s00006p00267830 [Amborella trichopoda]
Length = 169
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Frame = +1
Query: 172 ISSMAAQISQFLSWVLLMGLAIVVALSLWYFWNHLPSSTKRVR---------GLSHSDLK 324
I MA IS L L +G+ ++V + + L S R G+S DL+
Sbjct: 13 IMVMAIVISVIL---LFVGIGVLVLIHVCIVGRALRSGMIIARSNVNSGNSSGISREDLQ 69
Query: 325 GLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLC 504
L +++ E+ P +CAVCL F GD CRL+P+C H FH C D WL + CP+C
Sbjct: 70 RLPCFDYKTGDKEKGPIDCAVCLDGFQGGDKCRLLPICKHSFHAQCVDSWLLKAPICPIC 129
Query: 505 RCSV 516
R SV
Sbjct: 130 RTSV 133
>tpg|DAA47756.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 377
Score = 81.6 bits (200), Expect = 1e-13
Identities = 34/80 (42%), Positives = 46/80 (57%)
Frame = +1
Query: 268 NHLPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHY 447
++ P ++R+RGL + L TM + + + ECAVCL F GD RL+P C+H
Sbjct: 90 SYAPPPSRRMRGLDRAVLDSFPTMAYADVRAHKGALECAVCLSEFDDGDTLRLLPRCAHA 149
Query: 448 FHVSCADQWLRRHSTCPLCR 507
FH C D WL H TCP+CR
Sbjct: 150 FHTDCIDAWLASHVTCPVCR 169
>ref|XP_003521836.1| PREDICTED: RING-H2 finger protein ATL3 [Glycine max]
Length = 260
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/118 (38%), Positives = 59/118 (50%), Gaps = 20/118 (16%)
Frame = +1
Query: 214 VLLMGLAIVVALSLWYF----WNHLPSSTKRVR---------------GLSHSDLKGLST 336
+++M IV+AL L F W P+ R GL + L L
Sbjct: 28 IIIMFFVIVIALCLHLFARNFWWRSPAPQSRSHRRRRFVFSSGPDGGSGLDPAVLSSLPV 87
Query: 337 MVFQSHKDE-EDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCR 507
+VF+ H E +D ECAVCL G+ RL+P C+H FHV+C D W + HSTCPLCR
Sbjct: 88 LVFEGHAQEFKDGLECAVCLSEVVEGEKARLLPKCNHGFHVACIDMWFQSHSTCPLCR 145
>dbj|BAK03766.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +1
Query: 286 TKRVRGLSHSDLKGLSTMVF---QSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHV 456
++R+RGL + L+ L TM + ++HK + ECAVCL F D RL+P CSH FH
Sbjct: 105 SRRMRGLDPAALEALPTMAYADVKAHKVGKGELECAVCLSEFDDDDTLRLLPKCSHAFHA 164
Query: 457 SCADQWLRRHSTCPLCRCSVV 519
C D WL H TCP+CR ++V
Sbjct: 165 DCIDAWLASHVTCPVCRANLV 185
>ref|NP_001131506.1| uncharacterized protein LOC100192844 precursor [Zea mays]
gi|194691718|gb|ACF79943.1| unknown [Zea mays]
Length = 377
Score = 81.6 bits (200), Expect = 1e-13
Identities = 34/80 (42%), Positives = 46/80 (57%)
Frame = +1
Query: 268 NHLPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHY 447
++ P ++R+RGL + L TM + + + ECAVCL F GD RL+P C+H
Sbjct: 90 SYAPPPSRRMRGLDRAVLDSFPTMAYADVRAHKGALECAVCLSEFDDGDTLRLLPRCAHA 149
Query: 448 FHVSCADQWLRRHSTCPLCR 507
FH C D WL H TCP+CR
Sbjct: 150 FHTDCIDAWLASHVTCPVCR 169
>ref|XP_006357148.1| PREDICTED: RING-H2 finger protein ATL3-like [Solanum tuberosum]
Length = 236
Score = 81.3 bits (199), Expect = 1e-13
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +1
Query: 304 LSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRR 483
+SH D++ L + FQS P ECAVCL + G+ CRL+PLC+H FH C D WL +
Sbjct: 49 MSHEDIEKLPSYAFQSKDKGTSPIECAVCLDNLKVGEKCRLLPLCNHSFHAECIDLWLLK 108
Query: 484 HSTCPLCRCS 513
S CP+CR +
Sbjct: 109 TSICPMCRAT 118
>gb|ESW11053.1| hypothetical protein PHAVU_009G261400g [Phaseolus vulgaris]
gi|561012147|gb|ESW11054.1| hypothetical protein
PHAVU_009G261400g [Phaseolus vulgaris]
Length = 281
Score = 81.3 bits (199), Expect = 1e-13
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Frame = +1
Query: 202 FLSWVLLMGLAIVVALSLWYFWNHLPSSTKRVR--------------GLSHSDLKGLSTM 339
F +++++ L I + +++ N P S +R R GL S L + +
Sbjct: 27 FFFFLVVIALGIHLFTRNFWWRNPAPQSQRRRRRFVFSSGQEGGLRSGLDPSVLSSIPVL 86
Query: 340 VFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCSV 516
VFQ +D +D ECAVCL G+ RL+P C+H FHV C D W + HSTCPLCR SV
Sbjct: 87 VFQG-QDFKDGLECAVCLSEVVEGEKARLLPKCNHGFHVGCIDMWFQSHSTCPLCRNSV 144