BLASTX nr result

ID: Ephedra26_contig00017024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00017024
         (1210 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76882.1| unknown [Picea sitchensis]                             122   3e-25
gb|ABR18274.1| unknown [Picea sitchensis]                              95   5e-17
ref|XP_006853463.1| hypothetical protein AMTR_s00032p00196980 [A...    78   6e-12
ref|XP_002328052.1| predicted protein [Populus trichocarpa] gi|5...    59   3e-06

>gb|ADE76882.1| unknown [Picea sitchensis]
          Length = 475

 Score =  122 bits (306), Expect = 3e-25
 Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
 Frame = -3

Query: 1109 NVPSTEKDSKNDSSEKFNEINCDNAAK-----ENCPTGVSNEQNEACKGKTINPGGLVWG 945
            ++P T  D    + E+ ++IN + A +     E     VS E  +A  G   N  GL WG
Sbjct: 249  SLPETSADMDVGNGEEPDDINDEEAGENIQLVEYNQAEVSRESTDASPGNARNAEGLAWG 308

Query: 944  KACVRTSMRYXXXXXXXXXXXXXSRAARMVQYLLTKARKEDESMFEVHLTMFPFKNNPPL 765
            K   R+ M+Y             +  A+M  YLLTKA +E E+ +++H T+ PF+N   +
Sbjct: 309  KGGARSHMKYASVRGTHVKNNRCTYVAKMADYLLTKAHEEMETKYDIHFTLLPFENEEKI 368

Query: 764  PRLEKPHFCCGPTVTIMKXXXXXXXXXXLPINELEIVLERRD---------RLVESTPKI 612
            P L +PH CC PT+T+            +P  +LE+V+E+++         ++++ + K+
Sbjct: 369  PSLRRPHLCCRPTLTVEHICKFLSRFCTVPPEDLELVVEKQNNSANLGQNGKILQHSGKL 428

Query: 611  HSGKRKNTGAEDEGTVVILEQEMTVSTILEHFPELRGSLVLMYRYK 474
              GK     ++ E    +L QE T++ I     E RG+LVLMYR K
Sbjct: 429  GKGKAVLGASDSEKVAEVLNQEATLAEIFTACTECRGNLVLMYRCK 474


>gb|ABR18274.1| unknown [Picea sitchensis]
          Length = 169

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
 Frame = -3

Query: 923 MRYXXXXXXXXXXXXXSRAARMVQYLLTKARKEDESMFEVHLTMFPFKNNPPLPRLEKPH 744
           MRY              R A+MV YLL+KAR+EDE+ F++  T+ P +N+  LP LE P+
Sbjct: 1   MRYGSVSGSNSKNARGMRVAKMVNYLLSKAREEDENEFDIQFTLLPSENDENLPSLETPY 60

Query: 743 FCCGPTVTIMKXXXXXXXXXXLPINELEIVLERRDRLVESTPK---IHSGK----RKNTG 585
            CC PTV++            LP  +LEIV+E++  L+E   +    H GK    +   G
Sbjct: 61  LCCSPTVSVNHLCKLLALQLSLPAEDLEIVVEKQRNLIEPGSQSNFSHLGKPGKGKPTLG 120

Query: 584 AEDEGTVV-----------ILEQEMTVSTILEHFPELRGSLVLMYRYK 474
           A +   V+           +LEQE T++ I  ++   RG+L L YR K
Sbjct: 121 ASENQRVIEVLQQEATLAEVLEQEATLAEIFSYYTGCRGNLALTYRRK 168


>ref|XP_006853463.1| hypothetical protein AMTR_s00032p00196980 [Amborella trichopoda]
            gi|548857116|gb|ERN14930.1| hypothetical protein
            AMTR_s00032p00196980 [Amborella trichopoda]
          Length = 362

 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
 Frame = -3

Query: 1049 NCDNAAKENCPTGVSNEQNEACKGKTI--NPGGLVWGKACVRTSMRYXXXXXXXXXXXXX 876
            N D  + EN    V   +  +     I  NP  L WGK  VR+  RY             
Sbjct: 168  NIDGGSNENEDNNVEASRESSGASPCIGGNPEKLSWGKGGVRSHTRYGSVSGSYEKNQRN 227

Query: 875  SRAARMVQYLLTKARKEDESMFEVHLTMFPFKNNPPLPRLEKPHFCCGPTVTIMKXXXXX 696
             R AR++ Y   K+ +E+E  F++HLT+ P+ +   +P L++P+ CC PTVT+       
Sbjct: 228  RRIARIMDYFFNKSMEENEDEFDIHLTLVPW-DEESIPSLQRPYICCRPTVTVNYLCQYI 286

Query: 695  XXXXXLPINELEIVLER-RDRLVE---STPKIHSGKRKNTGAEDEGTVVILEQEMTVSTI 528
                 +   +LE+++ + RD ++    S P   +   +N    +   + IL  + T++ +
Sbjct: 287  AVETSVKAEDLELMVRKSRDGMLSDCLSQPDPSTSADQNPRPSENENLQILPTQETLAAL 346

Query: 527  LEHFPELRGSLV 492
               +P  RG LV
Sbjct: 347  HACYPCSRGDLV 358


>ref|XP_002328052.1| predicted protein [Populus trichocarpa]
            gi|566211348|ref|XP_006372726.1| zinc finger family
            protein [Populus trichocarpa] gi|550319374|gb|ERP50523.1|
            zinc finger family protein [Populus trichocarpa]
          Length = 497

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 5/247 (2%)
 Frame = -3

Query: 1196 STEVVSTNDSTINLSSTEVRDADSLNKKENVPSTEKDSKNDSSEKFNEINCDNAAKENCP 1017
            S ++   ND  I   S+   D  S   +   P     S+  SS     +N +    EN  
Sbjct: 270  SEDIEDENDDNIGKDSSSA-DERSTEVRHRRPKRRWPSQPSSSA----VNSEGGGAENDL 324

Query: 1016 TGVSNEQNEACK-GKTINPGGLVWGKACVRTSMRYXXXXXXXXXXXXXSRAARMVQYLLT 840
               SN +N     G   N   L WG+   R+  RY             +R +++V+YL +
Sbjct: 325  D--SNRENRGLSPGLAWNTEMLAWGRGGTRSHTRYGNPSGCNNKNSRNTRLSKLVEYLRS 382

Query: 839  KARKEDESMFEVHLTMFPFKNNPPLPRLEKPHFCCGPTVTIMKXXXXXXXXXXLPINELE 660
               K DE   ++HL +     N   P L++P+ CC P++++            L   E+E
Sbjct: 383  LDEKNDE--LDIHLKLISL-GNQSTPSLQQPYLCCRPSLSVKHLCEYVAHQTTLQAEEVE 439

Query: 659  IVLERRDRLVESTPKIHSGKRKNTGAEDE----GTVVILEQEMTVSTILEHFPELRGSLV 492
            ++L +             GK +N  A+        + IL+ + TV+ +       R  L+
Sbjct: 440  LLLIK-------------GKAENLSAKHSQIPMDELQILKGQETVAGLKASCSSSRDHLI 486

Query: 491  LMYRYKQ 471
            L YR K+
Sbjct: 487  LAYRQKE 493


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