BLASTX nr result

ID: Ephedra26_contig00016992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016992
         (451 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24494.1| unknown [Picea sitchensis]                              55   2e-12

>gb|ABK24494.1| unknown [Picea sitchensis]
          Length = 366

 Score = 55.5 bits (132), Expect(2) = 2e-12
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 44/148 (29%)
 Frame = +1

Query: 124 SEHKLACSKRNLEECIAAIKKKEDEVDK-------------------KNLTIAV------ 228
           ++  L  +K  L ECI A+KKK++E+D+                   + LT  V      
Sbjct: 148 NDKNLIRAKNILHECIEAMKKKDEELDRQGQQRSKLENCSSMLRRMGEKLTSPVSLDGSK 207

Query: 229 ----LCSERWVKSST---------------SAPRKSLQ*LDHQPLWAAKMMNLELKIRDE 351
               L +    K++T                 P  SL      P WA+ M+ L+ K+++E
Sbjct: 208 AGSLLTAMYGAKAATIFVCGVVAAALLVKPRRPLPSLHLTSSYPSWASSMLRLQSKVKEE 267

Query: 352 VNKRKADKGSSSMLQGLDNMHMEVKQLY 435
           ++K+KA   SS++L  LD +H EVK+LY
Sbjct: 268 IDKKKAGASSSALLHELDCVHSEVKKLY 295



 Score = 42.4 bits (98), Expect(2) = 2e-12
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +2

Query: 2   DGVKLLDSCNVL*ESFQDVQRYRILVML 85
           D VKLLD CNVL ESF DV+RY++LV L
Sbjct: 109 DSVKLLDVCNVLKESFADVERYQMLVQL 136