BLASTX nr result
ID: Ephedra26_contig00016898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00016898
(1433 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK23650.1| unknown [Picea sitchensis] gi|224286688|gb|ACN410... 541 e-151
ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-li... 517 e-144
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is... 516 e-143
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera] 514 e-143
ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citr... 513 e-143
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li... 512 e-142
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li... 510 e-142
gb|EOY16376.1| ATPase family associated with various cellular ac... 510 e-142
ref|XP_002307456.1| replication factor C 37 kDa family protein [... 510 e-142
ref|XP_002520330.1| replication factor C / DNA polymerase III ga... 509 e-141
gb|AFK40832.1| unknown [Lotus japonicus] 507 e-141
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li... 507 e-141
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S... 504 e-140
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc... 504 e-140
ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-li... 503 e-140
ref|XP_006416276.1| hypothetical protein EUTSA_v10008129mg [Eutr... 502 e-139
ref|XP_003526646.1| PREDICTED: replication factor C subunit 2-li... 501 e-139
ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [S... 499 e-139
ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group] g... 499 e-138
ref|XP_001767691.1| predicted protein [Physcomitrella patens] gi... 499 e-138
>gb|ABK23650.1| unknown [Picea sitchensis] gi|224286688|gb|ACN41047.1| unknown [Picea
sitchensis]
Length = 339
Score = 541 bits (1393), Expect = e-151
Identities = 262/340 (77%), Positives = 307/340 (90%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + + QWVEKYRP+QV DV+HQEEVV+ALTN++ TGNLPHLLFYGPPGTGKTT+AL
Sbjct: 1 MAPIHSSSQQWVEKYRPKQVKDVAHQEEVVRALTNTLETGNLPHLLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+ Y+SRVLELNASDDRGINVVRTKIKDFAA++V + + SG+ CPPFKIII
Sbjct: 61 AIAHQLFGPE-YKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGNTNSGYLCPPFKIII 119
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPL E++M+
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLVEDIMT 179
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
RILHIC EEG+ LD DAL LSSIS+GDLRRAITYLQSAARLYG+SIS+ NLISVSG+V
Sbjct: 180 GRILHICKEEGVHLDSDALTMLSSISEGDLRRAITYLQSAARLYGSSISSNNLISVSGIV 239
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P EV+ SL++ CK+G FD A+K VSDIIAEG+PA+Q+ SQL+D++V+A D+SD+TKA+I
Sbjct: 240 PKEVVQSLYQACKTGQFDLAQKEVSDIIAEGHPASQIFSQLYDMVVQATDISDETKARIS 299
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
R AEADKCLIDGADEYLQLLDVASN+ R+ CN++QECCY
Sbjct: 300 QRLAEADKCLIDGADEYLQLLDVASNAMRSLCNMTQECCY 339
>ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-like isoform X1 [Citrus
sinensis]
Length = 342
Score = 517 bits (1331), Expect = e-144
Identities = 251/340 (73%), Positives = 295/340 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK FAA++V + + + G+PCPP+KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIII 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SR+LHICNEEGL LD +AL TLSSIS GDLRRAITYLQ AARL+G+SI++++LISVSGV+
Sbjct: 181 SRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGSSITSKDLISVSGVI 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P EV+ LF C+SG FD A K V++IIAEGYPA+ ++SQLFDV+VE D+SD+ KA+IC
Sbjct: 241 PPEVVEGLFAVCRSGDFDLANKEVNNIIAEGYPASLLLSQLFDVVVETEDISDEQKARIC 300
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
AE DKCL+DGADEYLQLLDVASN RA CN+ +E Y
Sbjct: 301 KCLAEVDKCLVDGADEYLQLLDVASNVIRAVCNMPEEFQY 340
>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
gi|302141781|emb|CBI18984.3| unnamed protein product
[Vitis vinifera]
Length = 341
Score = 516 bits (1328), Expect = e-143
Identities = 251/337 (74%), Positives = 295/337 (87%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + WVEKYRP+QV DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V + + G+PCPP+KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRILHIC EE L LD +AL TLSSIS GDLRRAITYLQ AARL+G+ IS+++LISVSGVV
Sbjct: 181 SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P V+ +LF CKSG FDSA K V+++IAEGYP +Q++ QLFDV+VE AD+SD+ KA+IC
Sbjct: 241 PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVE-ADISDEQKARIC 299
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQE 376
R AEADKCL+DGADEYLQLLDVASN+ RA CN+ +E
Sbjct: 300 KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEE 336
>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
Length = 341
Score = 514 bits (1323), Expect = e-143
Identities = 250/337 (74%), Positives = 294/337 (87%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + WVEKYRP+QV DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFA ++V + + G+PCPP+KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIII 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRILHIC EE L LD +AL TLSSIS GDLRRAITYLQ AARL+G+ IS+++LISVSGVV
Sbjct: 181 SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P V+ +LF CKSG FDSA K V+++IAEGYP +Q++ QLFDV+VE AD+SD+ KA+IC
Sbjct: 241 PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVE-ADISDEQKARIC 299
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQE 376
R AEADKCL+DGADEYLQLLDVASN+ RA CN+ +E
Sbjct: 300 KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEE 336
>ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
gi|557536378|gb|ESR47496.1| hypothetical protein
CICLE_v10001485mg [Citrus clementina]
Length = 382
Score = 513 bits (1322), Expect = e-143
Identities = 249/340 (73%), Positives = 295/340 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 41 MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 100
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK FAA++V + + + G+PCPP+KIII
Sbjct: 101 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIII 160
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 161 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 220
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SR+LHICNEEGL LD +AL TLSSIS GDLRRAITYLQ AARL+G+SI++++LISVSGV+
Sbjct: 221 SRVLHICNEEGLNLDAEALSTLSSISHGDLRRAITYLQGAARLFGSSITSKDLISVSGVI 280
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P EV+ LF C+SG FD A K V++IIAEGYPA+ ++SQLFDV+VE D+SD+ +A+IC
Sbjct: 281 PPEVVEGLFAVCRSGDFDLANKEVNNIIAEGYPASLLLSQLFDVVVETEDISDEQQARIC 340
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
A+ DKCL+DGADEYLQLLDVASN RA CN+ +E Y
Sbjct: 341 KCLAKVDKCLVDGADEYLQLLDVASNVIRAVCNMPEEFQY 380
>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum lycopersicum]
Length = 339
Score = 512 bits (1319), Expect = e-142
Identities = 245/340 (72%), Positives = 300/340 (88%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + + WVEKYRP+QV DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPVMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK+FAA++V + R +SG+PCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNR-QSGYPCPPFKIII 119
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMT+DAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+M
Sbjct: 120 LDEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMG 179
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRILHIC EEGL LD +AL TLSSIS GDLRRAITYLQSAARL+G+SIS + LISVSGV+
Sbjct: 180 SRILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVI 239
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
PNEV+ ++F C+SG FD A K V+++IAEGYP +Q++SQL+D++V+A D+SD+ KA+IC
Sbjct: 240 PNEVVQAIFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDILVDADDISDEQKARIC 299
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
+FAEADKCL+DGADEYLQLL+VAS++ +A N+ Q+ +
Sbjct: 300 KKFAEADKCLVDGADEYLQLLNVASSTMQALSNMPQDMTF 339
>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 339
Score = 510 bits (1314), Expect = e-142
Identities = 244/340 (71%), Positives = 299/340 (87%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + + WVEKYRP++V DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPVMQSSQPWVEKYRPKKVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK+FAA++V + R +SG+PCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNR-QSGYPCPPFKIII 119
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMT+DAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVM
Sbjct: 120 LDEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEVMG 179
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRILHIC EEGL LD +AL TLSSIS GDLRRAITYLQSAARL+G+SIS + LISVSGV+
Sbjct: 180 SRILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVI 239
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
PNEV+ ++F C+SG FD A K V+++IAEGYP +Q++SQL+D++V+A D+SD+ KA+IC
Sbjct: 240 PNEVVQAMFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDIVVDADDISDEQKARIC 299
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
+FAEADKCL+DGADEYLQLL+V S++ +A N+ Q+ +
Sbjct: 300 KKFAEADKCLVDGADEYLQLLNVVSSTMQALSNMPQDMAF 339
>gb|EOY16376.1| ATPase family associated with various cellular activities (AAA)
[Theobroma cacao]
Length = 345
Score = 510 bits (1314), Expect = e-142
Identities = 246/343 (71%), Positives = 298/343 (86%), Gaps = 3/343 (0%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + WVEKYRP+QV DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASD+RGINVVRTKIKDFAA++V + + + G+PCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSGQRQGGYPCPPFKIII 120
Query: 1026 LDEADSMTEDAQ---NALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEE 856
LDEADSMTEDAQ NALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFK L EE
Sbjct: 121 LDEADSMTEDAQACLNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKALSEE 180
Query: 855 VMSSRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVS 676
+MS+R+LHICNEEGL LD +AL TLSSIS GDLRRAITYLQ AARL+G++IS+++L+SVS
Sbjct: 181 IMSNRVLHICNEEGLHLDSEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLLSVS 240
Query: 675 GVVPNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKA 496
GV+P EV+ +L+ CKSG FD A K V+++IAEG+P +Q++SQLFDV+VEA D+ D+ KA
Sbjct: 241 GVIPQEVVEALYAACKSGNFDLANKEVNNVIAEGFPVSQMLSQLFDVVVEADDIPDEQKA 300
Query: 495 QICNRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
+IC AEADK L+DGADEYLQLLDVASN+ RA CN+ QE C+
Sbjct: 301 RICKSLAEADKRLVDGADEYLQLLDVASNTMRALCNMPQEFCF 343
>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
family protein [Populus trichocarpa]
Length = 342
Score = 510 bits (1314), Expect = e-142
Identities = 242/340 (71%), Positives = 295/340 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + QWVEKYRP+Q+ DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V + + + +PCPP+KIII
Sbjct: 61 AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
+RILHICNEEGL LD +AL TLSS+S GDLRRAITYLQ AARL+G+SIS+++LISVSG +
Sbjct: 181 NRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P EV +++ CK+G FD A K V+D+IAEGYP +Q+++QLF+V+VE D+SD+ KA+IC
Sbjct: 241 PREVTEAIYAACKNGDFDLANKEVNDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARIC 300
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
A ADKCL+DGADEYLQLLDV SN+ R+ CN+ QE Y
Sbjct: 301 KSLATADKCLVDGADEYLQLLDVVSNTMRSLCNMPQEFSY 340
>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223540549|gb|EEF42116.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 342
Score = 509 bits (1311), Expect = e-141
Identities = 244/340 (71%), Positives = 292/340 (85%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK+FAA++V + + G+PCPP+KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIII 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF F+CNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SR+LHIC EEGL LD +AL TLS +S GDLRRAITYLQ AARLYG++IS+++LISVSGV+
Sbjct: 181 SRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVI 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P E + +L+ C+SG FD A K V++IIAEGYP +Q++ QL +V+VEA D+SD+ KAQIC
Sbjct: 241 PQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQIC 300
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
ADKCL+DGADEYLQLLDVASN+ RA CN+ QE Y
Sbjct: 301 KSLGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFPY 340
>gb|AFK40832.1| unknown [Lotus japonicus]
Length = 342
Score = 507 bits (1305), Expect = e-141
Identities = 243/340 (71%), Positives = 294/340 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + + WVEKYRP+QV DV++Q+EVV+ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T K G+PCPP+KII+
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNPKKGGYPCPPYKIIV 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRIL+ICNEEGL LD + L TLSSIS GDLRRAITYLQS+ARL+G+ IS+++LISVSGVV
Sbjct: 181 SRILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLFGSHISSKDLISVSGVV 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P V+ ++ + CKSG FD A K V++ IAEGYPA+Q+++QLFD IVE SD+ KA+IC
Sbjct: 241 PENVVEAILKACKSGNFDLANKEVNNFIAEGYPASQLLTQLFDAIVEEKGTSDKQKARIC 300
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
+ EADKCL+DGADEYLQLLDV SN+T+AFC++ + Y
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVISNTTKAFCDMPEGLSY 340
>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoformX1 [Glycine
max] gi|571452162|ref|XP_006578961.1| PREDICTED:
replication factor C subunit 4-like isoform X2 [Glycine
max] gi|571452164|ref|XP_006578962.1| PREDICTED:
replication factor C subunit 4-like isoform X3 [Glycine
max]
Length = 342
Score = 507 bits (1305), Expect = e-141
Identities = 250/340 (73%), Positives = 294/340 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L T WVEKYRP+QV DV+HQ+EVV+ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T + KSG+PCPPFKII+
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIV 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNYVSRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRIL+I EEGL LD +AL TLSSIS GDLRRAITYLQSAARL+G+SIS+ NLISVSGVV
Sbjct: 181 SRILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVV 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P +V+ L + CKSG FD A K V++ IAEGYPA+Q+++QLF+ IVE D+SD+ KA+I
Sbjct: 241 PAKVVEELLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFESIVEDNDLSDEQKARIS 300
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
+ EADKCL+DGADEYLQLLDV SN+ +AF N+ + Y
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVVSNTMKAFSNMPETFAY 340
>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
gi|241922268|gb|EER95412.1| hypothetical protein
SORBIDRAFT_01g045530 [Sorghum bicolor]
Length = 339
Score = 504 bits (1297), Expect = e-140
Identities = 245/336 (72%), Positives = 291/336 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + ++ WVEKYRPRQV DV+HQEEV++ LTN++ T +LPH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+A++L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T R K+G+PCPP+KIII
Sbjct: 61 AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTAR-KAGYPCPPYKIII 119
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 179
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRI+HICNEEGL LD AL TLS+IS GDLRRAITYLQSAARL+G+S+S+ +LISVSGV+
Sbjct: 180 SRIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSLSSSDLISVSGVI 239
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P +V+ SL CKSG FD A K VS+IIA+GYP +Q+++Q DVIV A D+ D KA+IC
Sbjct: 240 PEDVVKSLLAACKSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVSADDIQDDQKARIC 299
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQ 379
+ E DKCL+DGADEYLQLLDVAS + RA N+ Q
Sbjct: 300 KKLGETDKCLVDGADEYLQLLDVASETIRALFNMPQ 335
>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
gi|357520353|ref|XP_003630465.1| Replication factor C
subunit [Medicago truncatula] gi|217073528|gb|ACJ85124.1|
unknown [Medicago truncatula] gi|355491095|gb|AES72298.1|
Replication factor C subunit [Medicago truncatula]
gi|355524487|gb|AET04941.1| Replication factor C subunit
[Medicago truncatula] gi|388492316|gb|AFK34224.1| unknown
[Medicago truncatula]
Length = 339
Score = 504 bits (1297), Expect = e-140
Identities = 240/336 (71%), Positives = 294/336 (87%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + T WVEKYRP+QV DV+HQEEVV+ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T + K+G+PCPP+KII+
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIV 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRI++IC EEG+ LD + L TLS+IS GDLRRAITYLQSAARL+G+SIS+++LISVSG+V
Sbjct: 181 SRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIV 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P EV+ +L + C+SG FD A K V++ IAEGYP +Q+++QLF+ IVE D+SD+ KA+I
Sbjct: 241 PAEVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 300
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQ 379
+ EADKCL+DGADEYLQLLDV SN+ +A CN+ +
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVVSNTIQALCNMPE 336
>ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-like [Cicer arietinum]
Length = 341
Score = 503 bits (1295), Expect = e-140
Identities = 243/340 (71%), Positives = 293/340 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + + WVEKYRP+QV DV+HQEEV++ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPIIPSSQPWVEKYRPKQVKDVAHQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T + K+G+PCPP+KII+
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKNGYPCPPYKIIV 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRIL+IC EEGL LD + L LSSIS GDLRRAITYLQSAARL+G+SIS+++LISVSGVV
Sbjct: 181 SRILYICKEEGLYLDAEGLSALSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVV 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P EV+ +L + CKSG FD A K V++ IAEGYP +Q+++QLF+ IVE D+SD+ KA+I
Sbjct: 241 PAEVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQILTQLFEAIVEENDISDEQKARIS 300
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
+ EADKCL+DGADEYLQLL V SN+ +A CNL + Y
Sbjct: 301 KKLGEADKCLVDGADEYLQLLAVVSNTIQALCNLPEGFAY 340
>ref|XP_006416276.1| hypothetical protein EUTSA_v10008129mg [Eutrema salsugineum]
gi|557094047|gb|ESQ34629.1| hypothetical protein
EUTSA_v10008129mg [Eutrema salsugineum]
Length = 339
Score = 502 bits (1293), Expect = e-139
Identities = 247/338 (73%), Positives = 291/338 (86%), Gaps = 1/338 (0%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V + + G+PCP FKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNNRQGGYPCPSFKIII 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMT 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
+RILHICNEEGL L +AL TLSSIS GDLRRAITYLQSAARL+G++I++ +L+ VSGVV
Sbjct: 181 NRILHICNEEGLNLGGEALSTLSSISQGDLRRAITYLQSAARLFGSTITSTDLLDVSGVV 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAA-DVSDQTKAQI 490
P EV+ LF CKSG FD A K V DI+AEGYPA+Q+I+QLFD++VEA D++D+ KAQI
Sbjct: 241 PLEVVKRLFTACKSGDFDIANKEVDDIVAEGYPASQIINQLFDIVVEAGDDITDKQKAQI 300
Query: 489 CNRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQE 376
C AE DK L+DGADEYLQLLDVASN+ RA ++Q+
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASNTIRALSEMAQD 338
>ref|XP_003526646.1| PREDICTED: replication factor C subunit 2-like isoform 1 [Glycine
max]
Length = 342
Score = 501 bits (1291), Expect = e-139
Identities = 247/340 (72%), Positives = 294/340 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P L + WVEKYRP+QV DV+HQ+EVV+ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T + K+G+PCPPFKII+
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIV 120
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNYVSRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
SRIL+I EEGL LD +AL TLS IS GDLRRAITYLQSAARL+G+SIS+ NLISVSGVV
Sbjct: 181 SRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVV 240
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P +V+ +L + CKSG FD A K V++ IAEGYPA+Q+++QLF+ IVE D+SD+ KA+I
Sbjct: 241 PAKVVEALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARIS 300
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
+ EADKCL+DGADEYLQLLDV SN+ +AF +L + Y
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVVSNTIKAFNSLPEAFAY 340
>ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor]
gi|241942605|gb|EES15750.1| hypothetical protein
SORBIDRAFT_08g004780 [Sorghum bicolor]
Length = 339
Score = 499 bits (1286), Expect = e-139
Identities = 243/336 (72%), Positives = 290/336 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + ++ WVEKYRPRQV DV+HQEEV++ LTN++ T +LPH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+A++L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T R K+G+PCPP+KIII
Sbjct: 61 AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTAR-KAGYPCPPYKIII 119
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL EEVMS
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLVSRCAKFRFKPLSEEVMS 179
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
+RI+HICNEEGL LD AL TLS+IS GDLRRAITYLQSAARL+G+SIS+ +LISVSGV+
Sbjct: 180 NRIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISSSDLISVSGVI 239
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P +V+ SL C+SG FD A K VS+IIA+GYP +Q+++Q DVIV A D+ D KA+IC
Sbjct: 240 PEDVVKSLLAACRSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVGADDIPDDQKARIC 299
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQ 379
+ E DKCL+DGADEYLQLLDVAS + RA N+ Q
Sbjct: 300 KKLGETDKCLVDGADEYLQLLDVASETIRALFNMPQ 335
>ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group]
gi|75173107|sp|Q9FXM3.1|RFC2_ORYSJ RecName:
Full=Replication factor C subunit 2; Short=OsRFC2;
AltName: Full=Activator 1 subunit 2
gi|10798806|dbj|BAB16441.1| replication factor C 37 kDa
subunit [Oryza sativa Japonica Group]
gi|77553810|gb|ABA96606.1| Activator 1 37 kDa subunit,
putative, expressed [Oryza sativa Japonica Group]
gi|125535960|gb|EAY82448.1| hypothetical protein
OsI_37665 [Oryza sativa Indica Group]
gi|125578677|gb|EAZ19823.1| hypothetical protein
OsJ_35406 [Oryza sativa Japonica Group]
gi|215737297|dbj|BAG96226.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255670097|dbj|BAF29315.2| Os12g0176500 [Oryza sativa
Japonica Group]
Length = 339
Score = 499 bits (1285), Expect = e-138
Identities = 245/336 (72%), Positives = 290/336 (86%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + + WVEKYRPRQV DV+HQEEVV+ LT ++ T +LPH+LFYGPPGTGKTT+AL
Sbjct: 1 MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+A++L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V + R K G+PCPP+KIII
Sbjct: 61 AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAR-KGGYPCPPYKIII 119
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 179
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
+RILHICNEEGL LD AL TLS+IS+GDLRRAITYLQSAARL+G+SIS+ +LISVSG +
Sbjct: 180 NRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAI 239
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P +V+ SL CKSG FD A K V++IIA+GYP +Q+ISQ DVIV A D+ D+ KA+IC
Sbjct: 240 PEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARIC 299
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQ 379
+ EADKCL+DGADEYLQLLDVAS + RA ++ Q
Sbjct: 300 KKLGEADKCLVDGADEYLQLLDVASETIRALFDMPQ 335
>ref|XP_001767691.1| predicted protein [Physcomitrella patens] gi|162681011|gb|EDQ67442.1|
predicted protein [Physcomitrella patens]
Length = 338
Score = 499 bits (1285), Expect = e-138
Identities = 241/340 (70%), Positives = 289/340 (85%)
Frame = -3
Query: 1386 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 1207
M+P + T QWVEKYRPR+V DV+HQEEVV+ LTN++ TGNLPHLLFYGPPGTGKTT+AL
Sbjct: 1 MAPVMQSTQQWVEKYRPRKVKDVAHQEEVVRTLTNTLETGNLPHLLFYGPPGTGKTTTAL 60
Query: 1206 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 1027
A+ H+LFGP+LY++RVLELNASDDRGINVVRTKIKDFA ++V SG+PCPPFK++I
Sbjct: 61 AICHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAGVAVGA--GVSGYPCPPFKVLI 118
Query: 1026 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 847
LDEADSMTEDAQNALRRTME YSKVTRFCFICNYVSRIIEPLASRCAKFRFKPL E VM
Sbjct: 119 LDEADSMTEDAQNALRRTMENYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLLENVMQ 178
Query: 846 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSISTRNLISVSGVV 667
+RI +IC EEGL+LD +AL TLS +S+GDLRRAIT LQ A RLYG++IS++ +ISVSG+V
Sbjct: 179 NRIQYICQEEGLKLDQEALSTLSRVSEGDLRRAITCLQCAVRLYGSNISSKEIISVSGIV 238
Query: 666 PNEVIMSLFEKCKSGVFDSAEKVVSDIIAEGYPAAQVISQLFDVIVEAADVSDQTKAQIC 487
P+ V+ L + C+SG FD A + V DIIAEG+P +Q++SQLFD +V++ ++SD KA+I
Sbjct: 239 PDSVLEGLLKACQSGQFDLAHQEVRDIIAEGHPVSQILSQLFDFVVQSPNISDIQKARIT 298
Query: 486 NRFAEADKCLIDGADEYLQLLDVASNSTRAFCNLSQECCY 367
R AE DKCLIDGADEYLQL+DVASN+ RA CN +QEC Y
Sbjct: 299 ERLAETDKCLIDGADEYLQLMDVASNTMRALCNQTQECTY 338