BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016698
         (844 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 76   2e-11
ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...    64   9e-08
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               63   1e-07
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               62   3e-07
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...    62   3e-07
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               61   4e-07
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               61   4e-07
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         61   6e-07
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    60   8e-07
gb|AFB73911.1| polyprotein [Citrus sinensis]                           60   8e-07
gb|AFB73912.1| polyprotein [Citrus sinensis]                           60   1e-06
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]    58   4e-06
ref|XP_005717340.1| Retrovirus-related Gag-Pol polyprotein [Chon...    58   5e-06
ref|XP_005714974.1| unnamed protein product [Chondrus crispus] g...    57   8e-06
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...    57   8e-06

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
 Frame = +1

Query: 73  IPKIKTDNWTTRDKIAKAYIKSAISKNILGLIQSEKHSFNIWTKLIFFLXXXXXXXXXGL 252
           +P    + W  RD+I   +I S +SK++L L    + S ++W  L              L
Sbjct: 322 VPNASFETWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSL 381

Query: 253 RRKLHNLNFPTNGTVAEFIQSICEIRDKLDSCGEPASSTDLFYCTLDALPAEWMNCKDNI 432
           R K+  ++   + ++ +F+ SI EI +KL + GEP S +DL    L  LP E+ +  D+I
Sbjct: 382 RSKIQTIH-KGDSSMTDFLNSIKEISNKLAAAGEPLSESDLVAYILSGLPDEYESFVDSI 440

Query: 433 LMNRIKIDFDDLCQMLLDKEHDINRKKTVEPESEVNVAENKKPFK--RSYNSKNIQNIRN 606
                 +  D+L  +LL KE  + ++KT    S      +  PF    + +S ++ +   
Sbjct: 441 ETRNESVTADELHGLLLSKEISLQKRKTRASSS------SNAPFHAYAAQSSTHVGHFNK 494

Query: 607 SNTYCHIYDTNRHDTSNCYFNAKGSNF 687
            N+    ++ NR+  +  +   K  N+
Sbjct: 495 GNSRGRFHNRNRYTQNRNFGGNKPHNW 521


>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi|355493153|gb|AES74356.1|
            Histone deacetylase [Medicago truncatula]
          Length = 1775

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 17/249 (6%)
 Frame = +1

Query: 1    YHIWAQTLETFLDANNLLDVVVE-EIPKIK---------TDN-----WTTRDKIAKAYIK 135
            Y  W Q +E  L    ++  V+  EIP +          T+N     W  +D +   ++ 
Sbjct: 483  YLQWKQQVEGVLRGTKMVKFVISPEIPPVYLTDAAREAGTENSAYTEWEEQDSLLCTWVL 542

Query: 136  SAISKNILGLIQSEKHSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQS 315
            S IS ++L      +HS+  W ++  +           LR +L ++   +  TVAEFI  
Sbjct: 543  STISPSLLSRFVLLRHSWQAWDEIHSYCFTQMKTRSGQLRSELRSITKGSR-TVAEFIAR 601

Query: 316  ICEIRDKLDSCGEPASSTDLFYCTLDALPAEWMNCKDNILMNRIKIDFDDLCQMLLDKE- 492
            I  I + L S G+P S  DL    L+AL  E+     ++      +  D+L   LL +E 
Sbjct: 602  IRAISESLASIGDPVSHRDLIEVVLEALLEEFDPIVASVNAKSEVVSLDELKYQLLTQES 661

Query: 493  -HDINRKKTVEPESEVNVAENKKPFKRSYNSKNIQNIRNSNTYCHIYDTNRHDTSNCYFN 669
             ++  +K  +     VN+ E      +S+   N QN    + Y      N+   SN  F 
Sbjct: 662  RNENFKKAAITEPVSVNLTETANSESQSH-GPNSQN----HNYTDGTGNNQFPNSNPNFG 716

Query: 670  AKGSNFKPR 696
             +   F+ R
Sbjct: 717  GRNGQFRGR 725


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 62/295 (21%), Positives = 111/295 (37%), Gaps = 14/295 (4%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTTRDKIAKAYIKSAISKNILGLIQSEK 180
           + +W   +   L  +N LD +   +  I  + W   D  A A +  A++ ++L  I  +K
Sbjct: 15  FSLWKLKIRAILRKDNCLDAIDGRLADITDEKWKEMDDNAVANLHLAMADSVLSSIAEKK 74

Query: 181 HSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSCGEPA 360
            +  IW  LI             L+R+L+ L    + +V + I ++  +  +L +     
Sbjct: 75  TAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLQMGESTSVTDHINTLNTLFSQLTASDFKI 134

Query: 361 SSTDLFYCTLDALPAEWMNCKDNILMNRI--KIDFDDLCQMLLDKEHDINRKKTVEPESE 534
           +  +     L +LP  +     NI  N I   + FDD+   +L++E   +R+K  E  SE
Sbjct: 135 AKNERAELLLQSLPDSYDQLIINITNNNIADTLHFDDVAGAILEEE---SRRKNKEERSE 191

Query: 535 VNVAENKKPFKR----------SYNSKNIQNIRNSNTYCHIYDTNRHDTSNCYFNAKGSN 684
            +         R          S N    ++ R  N  C+      H    C+      N
Sbjct: 192 SSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECW------N 245

Query: 685 FKPRLYKKTK*QQNQVFEANMAKKXXXXXXXXXTDE--NKKLESSWFLDSGCNTH 843
            K    K ++   +Q   A+ +           T     ++L   W +DSG   H
Sbjct: 246 IKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWH 300


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 60/293 (20%), Positives = 109/293 (37%), Gaps = 12/293 (4%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTTRDKIAKAYIKSAISKNILGLIQSEK 180
           + +W   +   L  +N LD +      I  + W   D  A A +  A++ ++L  I  +K
Sbjct: 15  FSLWKLKIRAILRKDNCLDAIDGRPADITDEKWKEMDDNAVANLHLAMADSVLSSIAEKK 74

Query: 181 HSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSCGEPA 360
            +  IW  LI             L+R+L+ L    + +V + I ++  +  +L +     
Sbjct: 75  TAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDFKI 134

Query: 361 SSTDLFYCTLDALPAEWMNCKDNILMNRI--KIDFDDLCQMLLDKEHDINRKKTVEPESE 534
           +  +     L +LP  +     NI  N I   + FDD+   +L++E   +R+K  E  SE
Sbjct: 135 AENERAELLLQSLPDSYDQLIINITNNNIADTLHFDDVAGAILEEE---SRRKNKEERSE 191

Query: 535 VNVAENKKPFKR----------SYNSKNIQNIRNSNTYCHIYDTNRHDTSNCYFNAKGSN 684
            +         R          S N    ++ R +N  C+      H    C+ N K   
Sbjct: 192 SSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKNNIKCYGCGMKGHVKKECWNNKKNGE 251

Query: 685 FKPRLYKKTK*QQNQVFEANMAKKXXXXXXXXXTDENKKLESSWFLDSGCNTH 843
                  +    Q  V   +   +         ++  ++L   W +DSG   H
Sbjct: 252 KN----SEATTSQGCVASTSDDGEILYSEAATSSEGERQLNDVWIMDSGATWH 300


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 4/209 (1%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTT----RDKIAKAYIKSAISKNILGLI 168
           + +W   +   L   + LD  +E   K KT  WT     +D+ A + I+  +S +IL  +
Sbjct: 17  FSLWQVKMRAVLAQTSDLDEALESFGKKKTTEWTAEEKQKDRKALSLIQLLLSNDILQEV 76

Query: 169 QSEKHSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSC 348
             EK +  +W KL              ++ KL +     +G+V   I    EI   L S 
Sbjct: 77  LQEKTAEELWLKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLNHISVFKEIVADLVSM 136

Query: 349 GEPASSTDLFYCTLDALPAEWMNCKDNILMNRIKIDFDDLCQMLLDKEHDINRKKTVEPE 528
                  DL    L +LP+ + N +D IL++R ++   ++ + L ++E      ++    
Sbjct: 137 EVQFDDEDLGLLLLCSLPSSYANFRDTILLSRDELTLAEVYEALQNREKMKGMVQSDPSS 196

Query: 529 SEVNVAENKKPFKRSYNSKNIQNIRNSNT 615
           S+    +NK+  K    +  + +  NS++
Sbjct: 197 SKGEALQNKEKRKSDGKASVVTSAENSDS 225


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 62/295 (21%), Positives = 110/295 (37%), Gaps = 14/295 (4%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTTRDKIAKAYIKSAISKNILGLIQSEK 180
           + +W   +   L  +N LD +      I  + W   D  A A +  A++ ++L  I  +K
Sbjct: 15  FSLWKLKIRAILRKDNCLDAIDGRPADITDEKWKEMDDNAVANLHLAMADSVLSSIAEKK 74

Query: 181 HSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSCGEPA 360
            +  IW  LI             L+R+L+ L    + +V + I ++  +  +L +     
Sbjct: 75  TAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDFKI 134

Query: 361 SSTDLFYCTLDALPAEWMNCKDNILMNRI--KIDFDDLCQMLLDKEHDINRKKTVEPESE 534
           +  +     L +LP  +     NI  N I   + FDD+   +L++E   +R+K  E  SE
Sbjct: 135 AENERAELLLQSLPDSYDQLIINITNNNITDTLHFDDVAGAILEEE---SRRKNKEERSE 191

Query: 535 VNVAENKKPFKR----------SYNSKNIQNIRNSNTYCHIYDTNRHDTSNCYFNAKGSN 684
            +         R          S N    ++ R  N  C+      H    C+      N
Sbjct: 192 SSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECW------N 245

Query: 685 FKPRLYKKTK*QQNQVFEANMAKKXXXXXXXXXTDE--NKKLESSWFLDSGCNTH 843
            K    K ++   +Q   A+ +           T     ++L   W +DSG   H
Sbjct: 246 IKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWH 300


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 62/295 (21%), Positives = 110/295 (37%), Gaps = 14/295 (4%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTTRDKIAKAYIKSAISKNILGLIQSEK 180
           + +W   +   L  +N LD +      I  + W   D  A A +  A++ ++L  I  +K
Sbjct: 15  FSLWKLKIRAILRKDNCLDAIDGRPADITDEKWKEMDDNAVANLHLAMADSVLSSIAEKK 74

Query: 181 HSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSCGEPA 360
            +  IW  LI             L+R+L+ L    + +V + I ++  +  +L +     
Sbjct: 75  TAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDFKI 134

Query: 361 SSTDLFYCTLDALPAEWMNCKDNILMNRI--KIDFDDLCQMLLDKEHDINRKKTVEPESE 534
           +  +     L +LP  +     NI  N I   + FDD+   +L++E   +R+K  E  SE
Sbjct: 135 AENERAELLLQSLPDSYDQLIINITNNNIADTLHFDDVAGAILEEE---SRRKNKEERSE 191

Query: 535 VNVAENKKPFKR----------SYNSKNIQNIRNSNTYCHIYDTNRHDTSNCYFNAKGSN 684
            +         R          S N    ++ R  N  C+      H    C+      N
Sbjct: 192 SSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECW------N 245

Query: 685 FKPRLYKKTK*QQNQVFEANMAKKXXXXXXXXXTDE--NKKLESSWFLDSGCNTH 843
            K    K ++   +Q   A+ +           T     ++L   W +DSG   H
Sbjct: 246 IKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWH 300


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 72/311 (23%), Positives = 116/311 (37%), Gaps = 30/311 (9%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTT----RDKIAKAYIKSAISKNILGLI 168
           + +W   +   L A   LD  +    K +T +W+     RD+ A +YI   +S NIL  +
Sbjct: 17  FSLWQVKMRAVL-AQQELDDALSGFDK-RTQDWSNDEKKRDRKAMSYIHLHLSNNILQEV 74

Query: 169 QSEKHSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSC 348
             E+ +  +W KL              L++KL       +G+V + + +  EI   L+S 
Sbjct: 75  LKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSAFKEIVADLESM 134

Query: 349 GEPASSTDLFYCTLDALPAEWMNCKDNILMNRIKIDFDDLCQMLLDKEHDINRKKTVEPE 528
                  DL    L +LP+ + N +D IL +R  +   ++   L  KE     KK V  E
Sbjct: 135 EVKYDEKDLALILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAKE---KMKKMVPSE 191

Query: 529 SEVNVAEN--KKPFKRSYNSKNIQNIRNSNTY------------CHIYDTNRHDTSNCYF 666
              + AE    +  ++  N+ N    ++S++Y            C     + HD S C+ 
Sbjct: 192 GSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCW- 250

Query: 667 NAKGSNFKPRLYKKTK*QQNQVFEANMAKKXXXXXXXXXTDENKKLE------------S 810
                    +L  K K     +      KK         TDE    E             
Sbjct: 251 ---------KLQDKDKRTGKYI---PKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSD 298

Query: 811 SWFLDSGCNTH 843
            W LD+ C  H
Sbjct: 299 QWILDTACTYH 309


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTT----RDKIAKAYIKSAISKNILGLI 168
           + +W   +   L   + LD  +E   K KT  WTT    +D+ A + I+  +S +IL  +
Sbjct: 17  FSLWQVKMRAVLAQTSDLDEALESFGKKKTTEWTTGEKRKDRKALSLIQLHLSNDILQEV 76

Query: 169 QSEKHSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSC 348
             EK +  +W KL              ++ KL +     +G+V   I    EI   L S 
Sbjct: 77  LQEKTAAELWLKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLNHISVFKEIVADLVSM 136

Query: 349 GEPASSTDLFYCTLDALPAEWMNCKDNILMNRIKIDFDDLCQMLLDKEHDINRKKTVEPE 528
                  DL    L +LP+ + N +D IL++R ++   ++ + L ++E     K  V+ +
Sbjct: 137 EVQFDDEDLGLLLLCSLPSSYENFRDTILLSRDELTLAEVYEALQNRE---KMKGMVQSD 193

Query: 529 SEVNVAE----NKKPFKRSYNSKN 588
           +  +  E      +  +R+YN  N
Sbjct: 194 ASSSKGEALQVKGRSEQRTYNDSN 217


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 57/290 (19%), Positives = 108/290 (37%), Gaps = 9/290 (3%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTTRDKIAKAYIKSAISKNILGLIQSEK 180
           + +W   ++  L  NN L  + E   +I  D W   D  A + +  A++  +L  +  + 
Sbjct: 15  FSLWKMKMKAVLRKNNCLAAIGERPMEITDDKWNEVDGNAISDLHLALADGVLSSVAEKN 74

Query: 181 HSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSCGEPA 360
            +  IW  L              L+RKL+ L    +  V + I ++  +  +L + G   
Sbjct: 75  TAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINTLKTLFSQLTTLGHNI 134

Query: 361 SSTDLFYCTLDALPAEWMNCKDNILMNR--IKIDFDDLCQMLLDKE----HDINRKKTVE 522
              +     L +LP  +     N+  N     + FDD+   +L++E    +  NR+ + +
Sbjct: 135 EENERAELLLQSLPDSYDQLIINLTNNNPVESLVFDDVAASVLNEESRRKNKENRQASSQ 194

Query: 523 PESEVNVAENKKPFKRSYNSKNIQNIR---NSNTYCHIYDTNRHDTSNCYFNAKGSNFKP 693
               ++V   +   +    S+N    +     N  C+      H    C+ N K    K 
Sbjct: 195 QAEALSVTRGRSTERGPSGSQNQGRSKFRGKKNVKCYNCGKKGHVKKECWSNQKRREGKE 254

Query: 694 RLYKKTK*QQNQVFEANMAKKXXXXXXXXXTDENKKLESSWFLDSGCNTH 843
               +T   Q  V   +   +         ++  K+L   W +DSG   H
Sbjct: 255 ---PETSNAQGCVASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGATWH 301


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 56/290 (19%), Positives = 109/290 (37%), Gaps = 9/290 (3%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTTRDKIAKAYIKSAISKNILGLIQSEK 180
           + +W   ++  L  NN L  + E   +I  D W   D  A + +  A++  +L  +  + 
Sbjct: 15  FSLWKMKMKAVLRKNNCLAAIGERPMEITDDKWNEVDSNAISDLHLALADGVLSSVAEKN 74

Query: 181 HSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSCGEPA 360
            +  IW  L              L+RKL+ L    +  V + I ++  +  +L + G   
Sbjct: 75  TAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINTLKTLFSQLTTLGHNI 134

Query: 361 SSTDLFYCTLDALPAEWMNCKDNILMNR--IKIDFDDLCQMLLDKE----HDINRKKTVE 522
              +     L +LP  +     N+  N     + FDD+   +L++E    +  NR+ + +
Sbjct: 135 EENERAELLLQSLPDSYDQLIINLTNNNPVDSLVFDDVAASVLNEESRRKNKENRQASSQ 194

Query: 523 PESEVNVAENKKPFKRSYNSKN---IQNIRNSNTYCHIYDTNRHDTSNCYFNAKGSNFKP 693
               ++V   +   +    S+N    ++    N  C+      H    C+ N K    K 
Sbjct: 195 QAEALSVTRGRSTERGPSGSQNHGRSKSRSKKNVKCYNCGKKGHVKKECWSNQKRREGKE 254

Query: 694 RLYKKTK*QQNQVFEANMAKKXXXXXXXXXTDENKKLESSWFLDSGCNTH 843
               ++   Q  V   +   +         ++  K+L   W +DSG   H
Sbjct: 255 ---PESSNAQGCVASTSDDGEILYSEATIVSEGRKRLSDVWLIDSGATWH 301


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 8/287 (2%)
 Frame = +1

Query: 7   IWAQTLETFLDANNLL---DVVVEEIPKIKTDN---WTTRDKIAKAYIKSAISKNILGLI 168
           ++   L  FLD N      +++ E+   +   +   WT +DK+    I +++S+ ++ LI
Sbjct: 52  LYGYDLMGFLDGNKTCPSKEIIAEDGTTVSNPDFVIWTRQDKLLLHAILASLSEGVVPLI 111

Query: 169 QSEKHSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSC 348
            +   S + W KL              L+ KL N+   T  +VAE++Q+I  I D+L   
Sbjct: 112 AAATSSRDAWVKLHKLYANKSRSRVMNLKEKLTNITCNTR-SVAEYLQTIKGIADELALI 170

Query: 349 GEPASSTDLFYCTLDALPAEWMNCKDNILMNRIKIDFDDLCQMLLDKEHDINRKKTVEPE 528
               S  DL    L+ L + +      I      I F++L   L++ E  + R+++    
Sbjct: 171 DTHLSDDDLTIFALNGLGSGFKEISAAIRARETPISFEELHDKLVEHETFLKREES-RGG 229

Query: 529 SEVNVAENKKPFKRSYNSK--NIQNIRNSNTYCHIYDTNRHDTSNCYFNAKGSNFKPRLY 702
           S V V   +  F  ++ S+  N QN    +        NRH     + N   +  +    
Sbjct: 230 SNVTVNSTRTSF-GNFQSRYGNGQNGNGQSNNGKRVFNNRHSQGRKFNNNGHTARQCHSA 288

Query: 703 KKTK*QQNQVFEANMAKKXXXXXXXXXTDENKKLESSWFLDSGCNTH 843
           ++   QQ +V                 T       S+W LDSG + H
Sbjct: 289 RRLLQQQPEVHH---------------TSFGNSSSSNWILDSGASHH 320


>ref|XP_005717340.1| Retrovirus-related Gag-Pol polyprotein [Chondrus crispus]
           gi|515797426|emb|CDF77556.1| Retrovirus-related Gag-Pol
           polyprotein [Chondrus crispus]
          Length = 1365

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 9/290 (3%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDN----WTTRDKIAKAYIKSAISKNILGLI 168
           ++IW Q +E  L   ++   V ++I +  T +    W   D  AKA I   +S + L  +
Sbjct: 19  FYIWKQKIELLLALRDVDQYVFDDISETATSDDRRKWIRGDAKAKAVIGLTLSDDYLQHV 78

Query: 169 QSEKHSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSC 348
           +    +   W  ++              RR  + ++   +  V  FI  + +I  +L S 
Sbjct: 79  RGCSSAKETWEAILNVFERHTLLNKLSARRDFYTVSMLPSEKVLVFINRVKQIAARLQSM 138

Query: 349 GEPASSTDLFYCTLDALPAEWMNC--KDNILMNRIKI-DFDDLCQMLLDKEHDINRKKTV 519
                  ++    L+ LP  + N     + L N  K+   D +   LL +E   + K   
Sbjct: 139 SVEIDDKEIAMAVLNGLPPRFDNLIVALDALGNEDKVFGLDFVKSRLLQEEQRESMKTAS 198

Query: 520 EPESEVNVAENKKPFKRSYNSKNIQNIRNSNTYCHIYDTN-RHDTSNCYFNAKGSNFKPR 696
                     N+ P +R     N     ++   C   D N R       F ++    KP 
Sbjct: 199 TTSPHAPALVNRMPIRRDMRCTNCNRHGHTAARCWGKDVNGRRPAPPDGFRSRNPGMKPS 258

Query: 697 LYKKTK*QQNQVFEANMAKKXXXXXXXXXTDENKKLES-SWFLDSGCNTH 843
            +      +++   A  A+          + E K + + SW +DSGC+ H
Sbjct: 259 AFVS----RDETSTAAFAESDFTCLLSTSSPEKKAVNAGSWLVDSGCSAH 304


>ref|XP_005714974.1| unnamed protein product [Chondrus crispus]
           gi|507111432|emb|CDF35155.1| unnamed protein product
           [Chondrus crispus]
          Length = 533

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 58/290 (20%), Positives = 107/290 (36%), Gaps = 9/290 (3%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDN----WTTRDKIAKAYIKSAISKNILGLI 168
           ++IW Q +E  L   ++   V ++I +  T +    W   D  AKA I   +S + L  +
Sbjct: 19  FYIWKQKIELLLALRDVDQYVFDDISENATSDDRRKWIRGDAKAKAVIGLTLSDDYLQHV 78

Query: 169 QSEKHSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSC 348
           +    +   W  ++              RR  + ++   +  V  FI  + ++  +L S 
Sbjct: 79  RGCSSAKETWEAILNVFERHTLLNKLSARRDFYTVSMLPSEKVLVFINRVKQLAARLQSM 138

Query: 349 GEPASSTDLFYCTLDALPAEWMNC--KDNILMNRIKI-DFDDLCQMLLDKEHDINRKKTV 519
                  ++    L+ LP  + N     + L N  K+   D +   LL +E   + K   
Sbjct: 139 SVEIDDKEIAMAVLNGLPPRFDNLIVALDALGNEDKVFGLDFVKSRLLQEEQRESMKTAS 198

Query: 520 EPESEVNVAENKKPFKRSYNSKNIQNIRNSNTYCHIYDTN-RHDTSNCYFNAKGSNFKPR 696
                     N+ P +R     N     ++   C   D N R       F ++    KP 
Sbjct: 199 TTSPHAPALVNRMPIRRDMRCTNCNRHGHTTARCWGKDVNGRRPAPPDGFRSRNPGMKPS 258

Query: 697 LYKKTK*QQNQVFEANMAKKXXXXXXXXXTDENKKLES-SWFLDSGCNTH 843
            +      +++   A  A+          + E K + + SW +DSGC+ H
Sbjct: 259 AFVS----RDETSTAAFAESDFTCLLSTSSPEKKAVNAGSWLVDSGCSAH 304


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 983

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 69/308 (22%), Positives = 111/308 (36%), Gaps = 27/308 (8%)
 Frame = +1

Query: 1   YHIWAQTLETFLDANNLLDVVVEEIPKIKTDNWTT----RDKIAKAYIKSAISKNILGLI 168
           + +W   +   L A   LD  +    K +T +W+     RD+ A +YI   +S NIL  +
Sbjct: 17  FSLWQVKMRAVL-AQQDLDDALSRFDK-RTQDWSNDEKKRDRKAMSYIHLHLSNNILHEV 74

Query: 169 QSEKHSFNIWTKLIFFLXXXXXXXXXGLRRKLHNLNFPTNGTVAEFIQSICEIRDKLDSC 348
             E+ +  +W KL              L++KL       + +V + + +  EI   L+S 
Sbjct: 75  LKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDESVMDHLSAFKEIVTDLESM 134

Query: 349 GEPASSTDLFYCTLDALPAEWMNCKDNILMNRIKIDFDDLCQMLLDKEHDINRKKTVEPE 528
                  DL    L +LP+ + N +D IL +R  +   ++   L  KE     KK V  E
Sbjct: 135 EVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDTLHAKE---KMKKMVPSE 191

Query: 529 SEVNVAE--------------NKKPFKRSYNSKNIQNIRNSNTYCHIYDTNRHDTSNCYF 666
              + AE              +K   K S + +     R        Y  +RHD S C+ 
Sbjct: 192 GSNSQAEGLVVRGRQQEKNTNSKSRDKSSSSYRGRSKSRGKYKSYKYYKRDRHDISECW- 250

Query: 667 NAKGSNFKPRLYKKTK*QQNQVFEANMAKKXXXXXXXXXTDENKKL---------ESSWF 819
                    +L  K K     V +    K+           + + L            W 
Sbjct: 251 ---------KLQDKDKRTGKYVPKGKKEKEGKAVVVTDGKSDAELLVAYAGCAQTSDQWI 301

Query: 820 LDSGCNTH 843
           LD+ C  H
Sbjct: 302 LDTACTNH 309