BLASTX nr result
ID: Ephedra26_contig00016565
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00016565
(759 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006650026.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 93 1e-16
ref|XP_006386017.1| hypothetical protein POPTR_0003s20310g [Popu... 92 2e-16
ref|XP_002303898.2| hypothetical protein POPTR_0003s20310g [Popu... 92 2e-16
ref|XP_006386016.1| hypothetical protein POPTR_0003s20310g [Popu... 92 2e-16
gb|EOY17560.1| Zinc finger family protein / RNA recognition moti... 92 2e-16
gb|EOY17559.1| Zinc finger family protein / RNA recognition moti... 92 2e-16
gb|EOY17558.1| Zinc finger family protein / RNA recognition moti... 92 2e-16
gb|EOY17557.1| Zinc finger family protein / RNA recognition moti... 92 2e-16
gb|EOY17556.1| Zinc finger family protein / RNA recognition moti... 92 2e-16
gb|EOY17555.1| Zinc finger family protein / RNA recognition moti... 92 2e-16
gb|EOY17554.1| Zinc finger family protein / RNA recognition moti... 92 2e-16
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 92 2e-16
gb|EMJ14799.1| hypothetical protein PRUPE_ppa002413mg [Prunus pe... 91 3e-16
gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Mo... 91 4e-16
ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, part... 91 4e-16
emb|CBI28616.3| unnamed protein product [Vitis vinifera] 91 4e-16
emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera] 91 4e-16
ref|XP_006650025.1| PREDICTED: zinc finger CCCH domain-containin... 91 6e-16
ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containin... 91 6e-16
ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containin... 91 6e-16
>ref|XP_006650026.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 23-like [Oryza brachyantha]
Length = 667
Score = 92.8 bits (229), Expect = 1e-16
Identities = 44/71 (61%), Positives = 60/71 (84%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEAT+VV+SRIQ L+P++A+KI+G+LL+QD D+EMIRLAFGP+ALLQ++I+ A+K
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGDKEMIRLAFGPEALLQSVIAQARKD 60
Query: 400 LGLAPTTSSDV 368
L L P +S V
Sbjct: 61 LALLPASSPTV 71
>ref|XP_006386017.1| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343612|gb|ERP63814.1| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 682
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/83 (56%), Positives = 64/83 (77%), Gaps = 6/83 (7%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ L+PENASKI+G LL+QD ++EMIRLAFGP+AL+ ++I A+K
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 400 LGLAPTT------SSDVYLFNNN 350
LGL+ T SS +L+++N
Sbjct: 61 LGLSSPTNLSTSPSSPSHLYSSN 83
>ref|XP_002303898.2| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343611|gb|EEE78877.2| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 705
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/83 (56%), Positives = 64/83 (77%), Gaps = 6/83 (7%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ L+PENASKI+G LL+QD ++EMIRLAFGP+AL+ ++I A+K
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 400 LGLAPTT------SSDVYLFNNN 350
LGL+ T SS +L+++N
Sbjct: 61 LGLSSPTNLSTSPSSPSHLYSSN 83
>ref|XP_006386016.1| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343610|gb|ERP63813.1| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 623
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/83 (56%), Positives = 64/83 (77%), Gaps = 6/83 (7%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ L+PENASKI+G LL+QD ++EMIRLAFGP+AL+ ++I A+K
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 400 LGLAPTT------SSDVYLFNNN 350
LGL+ T SS +L+++N
Sbjct: 61 LGLSSPTNLSTSPSSPSHLYSSN 83
>gb|EOY17560.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 7 [Theobroma cacao]
Length = 547
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ LEPENASKI+G LL+QD ++EMIRLAFGP+AL+ +++ AKK
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 400 LGL---APTTSS 374
LGL +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17559.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 6 [Theobroma cacao]
Length = 641
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ LEPENASKI+G LL+QD ++EMIRLAFGP+AL+ +++ AKK
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 400 LGL---APTTSS 374
LGL +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17558.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 5 [Theobroma cacao]
Length = 601
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ LEPENASKI+G LL+QD ++EMIRLAFGP+AL+ +++ AKK
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 400 LGL---APTTSS 374
LGL +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17557.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 4 [Theobroma cacao]
Length = 691
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ LEPENASKI+G LL+QD ++EMIRLAFGP+AL+ +++ AKK
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 400 LGL---APTTSS 374
LGL +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17556.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 3 [Theobroma cacao]
Length = 636
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ LEPENASKI+G LL+QD ++EMIRLAFGP+AL+ +++ AKK
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 400 LGL---APTTSS 374
LGL +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17555.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 2 [Theobroma cacao]
Length = 693
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ LEPENASKI+G LL+QD ++EMIRLAFGP+AL+ +++ AKK
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 400 LGL---APTTSS 374
LGL +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17554.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 1 [Theobroma cacao]
Length = 724
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ LEPENASKI+G LL+QD ++EMIRLAFGP+AL+ +++ AKK
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 400 LGL---APTTSS 374
LGL +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 91.7 bits (226), Expect = 2e-16
Identities = 43/64 (67%), Positives = 55/64 (85%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ L+PENASKI+GYLL+QD ++EMIRLAFGP+AL+ +LI AK +
Sbjct: 1 MDSYEATRIVFSRIQNLDPENASKIMGYLLIQDHGEKEMIRLAFGPEALIHSLILKAKTH 60
Query: 400 LGLA 389
LG +
Sbjct: 61 LGFS 64
>gb|EMJ14799.1| hypothetical protein PRUPE_ppa002413mg [Prunus persica]
Length = 675
Score = 91.3 bits (225), Expect = 3e-16
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEAT++VYSRIQ L+PENASKI+G+LL+QD D+EMIRLAFGP+ LL LI AK
Sbjct: 1 MDSYEATKIVYSRIQNLDPENASKIMGFLLIQDHGDKEMIRLAFGPETLLHNLIINAKTQ 60
Query: 400 LGL 392
LGL
Sbjct: 61 LGL 63
>gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Morus notabilis]
Length = 563
Score = 90.9 bits (224), Expect = 4e-16
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEA+R V+SRIQ LEPENA+KI+GYLL+QD ++EMIRLAFGP++LL LI AK +
Sbjct: 1 MDSYEASRTVFSRIQSLEPENATKIMGYLLIQDYGEKEMIRLAFGPESLLHNLIIKAKTH 60
Query: 400 LGLAPTTSS 374
L + P +SS
Sbjct: 61 LAILPKSSS 69
>ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, partial [Populus
trichocarpa] gi|550331093|gb|EEE87307.2| hypothetical
protein POPTR_0009s05520g, partial [Populus trichocarpa]
Length = 728
Score = 90.9 bits (224), Expect = 4e-16
Identities = 46/69 (66%), Positives = 52/69 (75%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEAT +V+SRIQ LEPENASKI+GYLLLQD ++EMIRLAFGP+ LLQ LI K
Sbjct: 44 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 103
Query: 400 LGLAPTTSS 374
LG T S
Sbjct: 104 LGFPSNTPS 112
>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 90.9 bits (224), Expect = 4e-16
Identities = 43/69 (62%), Positives = 57/69 (82%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ L+PENASKI+G LL+QD ++EMIRLAFGP+AL+ ++I A+K
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 400 LGLAPTTSS 374
LG++ T S
Sbjct: 61 LGISSNTPS 69
>emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
Length = 682
Score = 90.9 bits (224), Expect = 4e-16
Identities = 43/69 (62%), Positives = 57/69 (82%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEATR+V+SRIQ L+PENASKI+G LL+QD ++EMIRLAFGP+AL+ ++I A+K
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 400 LGLAPTTSS 374
LG++ T S
Sbjct: 61 LGISSNTPS 69
>ref|XP_006650025.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Oryza brachyantha]
Length = 679
Score = 90.5 bits (223), Expect = 6e-16
Identities = 43/71 (60%), Positives = 59/71 (83%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEAT+VV+SRIQ L+P++A+KI+G LL+QD D+EMIRLAFGP+ALLQ++++ A+K
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLQSVMAQARKE 60
Query: 400 LGLAPTTSSDV 368
L L P +S V
Sbjct: 61 LSLLPASSPTV 71
>ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X3 [Solanum tuberosum]
Length = 692
Score = 90.5 bits (223), Expect = 6e-16
Identities = 44/69 (63%), Positives = 57/69 (82%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEAT++V SRIQ L+PENASKI+GY+L+QD ++EMIRLAFGP+ LL +LI+ AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 400 LGLAPTTSS 374
LGL+ +SS
Sbjct: 61 LGLSSNSSS 69
>ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Solanum tuberosum]
Length = 695
Score = 90.5 bits (223), Expect = 6e-16
Identities = 44/69 (63%), Positives = 57/69 (82%)
Frame = -3
Query: 580 MDVYEATRVVYSRIQRLEPENASKIIGYLLLQDSADQEMIRLAFGPDALLQTLISTAKKY 401
MD YEAT++V SRIQ L+PENASKI+GY+L+QD ++EMIRLAFGP+ LL +LI+ AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 400 LGLAPTTSS 374
LGL+ +SS
Sbjct: 61 LGLSSNSSS 69