BLASTX nr result

ID: Ephedra26_contig00016531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016531
         (446 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829918.1| hypothetical protein AMTR_s00073p00138100 [A...    60   3e-07
ref|NP_175141.1| S-ribonuclease binding protein 1 [Arabidopsis t...    56   6e-06

>ref|XP_006829918.1| hypothetical protein AMTR_s00073p00138100 [Amborella trichopoda]
           gi|548835530|gb|ERM97334.1| hypothetical protein
           AMTR_s00073p00138100 [Amborella trichopoda]
          Length = 153

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = -3

Query: 186 GSDNEMAWNLLAPRRKS-REQELLENSQISSIDFLQTQRNSLPQSAGTVSTGLRLSLDDE 10
           G +++  WNL  PR+K  +E +L+ENSQISSIDFLQT +       G VS GL LSL+D+
Sbjct: 33  GEESDPGWNLWEPRKKKLKELDLIENSQISSIDFLQTHQ------VGAVSVGLGLSLNDK 86

Query: 9   RL 4
           RL
Sbjct: 87  RL 88


>ref|NP_175141.1| S-ribonuclease binding protein 1 [Arabidopsis thaliana]
           gi|11692936|gb|AAG40071.1|AF324720_1 F2G19.2
           [Arabidopsis thaliana]
           gi|11993871|gb|AAG42919.1|AF329502_1 putative
           S-ribonuclease binding protein SBP1 [Arabidopsis
           thaliana] gi|12321008|gb|AAG50626.1|AC083835_11
           S-ribonuclease binding protein SBP1, putative
           [Arabidopsis thaliana]
           gi|13194828|gb|AAK15576.1|AF349529_1 putative
           S-ribonuclease binding protein SBP1 [Arabidopsis
           thaliana] gi|17979239|gb|AAL49936.1| F2G19.22/F2G19.22
           [Arabidopsis thaliana] gi|20147309|gb|AAM10368.1|
           F2G19.22/F2G19.22 [Arabidopsis thaliana]
           gi|62320820|dbj|BAD93762.1| S-ribonuclease binding like
           protein [Arabidopsis thaliana]
           gi|332194002|gb|AEE32123.1| S-ribonuclease binding
           protein 1 [Arabidopsis thaliana]
          Length = 325

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
 Frame = -3

Query: 252 PYIPQFTACNRGQ----QVNGASGLHGSDNEMAWNL-LAPRRKS-REQELLEN-SQISSI 94
           PYIP F           Q++G+ G +G+D E  + L L PRR+  +EQ+ LEN SQISSI
Sbjct: 43  PYIPPFHVAGFAPGPVVQIDGSDGGNGADFEWNYGLGLEPRRERIKEQDFLENNSQISSI 102

Query: 93  DFLQTQRNSLPQSAGTVSTGLRLSLDDERL 4
           DFLQ         A +VSTGL LSLD+ R+
Sbjct: 103 DFLQ---------ARSVSTGLGLSLDNARV 123


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