BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016522
         (863 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304853.2| hypothetical protein POPTR_0003s21030g [Popu...   236   1e-59
ref|XP_006368536.1| hypothetical protein POPTR_0001s04140g [Popu...   231   2e-58
emb|CBI16537.3| unnamed protein product [Vitis vinifera]              226   6e-57
ref|XP_006858614.1| hypothetical protein AMTR_s00198p00028070 [A...   221   2e-55
gb|EOY08938.1| RNA polymerase II transcription mediators isoform...   221   2e-55
gb|EOY08937.1| RNA polymerase II transcription mediators isoform...   221   2e-55
gb|EOY08936.1| RNA polymerase II transcription mediators isoform...   221   2e-55
ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II tra...   218   2e-54
ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citr...   218   2e-54
ref|XP_006445589.1| hypothetical protein CICLE_v10014014mg [Citr...   218   2e-54
ref|XP_006340094.1| PREDICTED: mediator of RNA polymerase II tra...   218   3e-54
ref|XP_006340093.1| PREDICTED: mediator of RNA polymerase II tra...   218   3e-54
ref|XP_004296201.1| PREDICTED: mediator of RNA polymerase II tra...   213   9e-53
ref|XP_004237346.1| PREDICTED: mediator of RNA polymerase II tra...   208   2e-51
ref|XP_004159367.1| PREDICTED: mediator of RNA polymerase II tra...   201   2e-49
ref|XP_004502200.1| PREDICTED: mediator of RNA polymerase II tra...   201   3e-49
gb|EXC34516.1| Mediator of RNA polymerase II transcription subun...   201   4e-49
ref|XP_004144140.1| PREDICTED: mediator of RNA polymerase II tra...   200   6e-49
ref|XP_006591430.1| PREDICTED: mediator of RNA polymerase II tra...   197   5e-48
ref|XP_006601869.1| PREDICTED: mediator of RNA polymerase II tra...   195   2e-47

>ref|XP_002304853.2| hypothetical protein POPTR_0003s21030g [Populus trichocarpa]
            gi|550343676|gb|EEE79832.2| hypothetical protein
            POPTR_0003s21030g [Populus trichocarpa]
          Length = 1588

 Score =  236 bits (601), Expect = 1e-59
 Identities = 127/274 (46%), Positives = 164/274 (59%), Gaps = 2/274 (0%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLD M +LVQQATSF               WLA+QE  RR FSCGP+MVHAGCG
Sbjct: 535  QQPLQELLDGMALLVQQATSFVDVALDADCGDGPYGWLALQEHWRRGFSCGPSMVHAGCG 594

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L+ACHSLD +GVEL+DPL +D+  +AV +LL S+++ ALKSAFG  NLDGPL + +WC
Sbjct: 595  GALAACHSLDIAGVELVDPLSADIHSSAVISLLQSEIKTALKSAFG--NLDGPLCVTDWC 652

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQQ 587
            KGR  +G+G  + +   GE   +  K+S+S VT   GEP++P    A  S S K      
Sbjct: 653  KGRFQSGDGATTCDGLIGESTLSGCKDSSSIVTLPVGEPMSPALSCAAGSSSLKAS---- 708

Query: 588  SDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETE--SRNKPTXXXXXXXXX 761
                                S  +  ++D+   +R  Q++E E   R KPT         
Sbjct: 709  --------------------STLDGAKVDETSQRRSNQEIEPELRFRIKPTVFVLPSPAI 748

Query: 762  XXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
               YQDDWLKTS+++LQLWEKAPFEPYA PKP+S
Sbjct: 749  LVGYQDDWLKTSASSLQLWEKAPFEPYASPKPIS 782


>ref|XP_006368536.1| hypothetical protein POPTR_0001s04140g [Populus trichocarpa]
            gi|550346479|gb|ERP65105.1| hypothetical protein
            POPTR_0001s04140g [Populus trichocarpa]
          Length = 1587

 Score =  231 bits (590), Expect = 2e-58
 Identities = 123/274 (44%), Positives = 165/274 (60%), Gaps = 2/274 (0%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLD M +LVQQATSF               WLA+QE  RR FSCGP+M+HAGCG
Sbjct: 538  QQPLQELLDGMALLVQQATSFVDVALDADCGDGPYGWLALQEHWRRGFSCGPSMIHAGCG 597

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L++CH LD +GVEL+DPL +D+  +AV  LL S++++ALKSAFG  NL+GPL + +WC
Sbjct: 598  GTLASCHFLDIAGVELVDPLSADIHSSAVTTLLQSEIKIALKSAFG--NLEGPLCVTDWC 655

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQQ 587
            KG   +G+G  + +  SGE   ++ K+S STVT   GEP++P   SA  S S K      
Sbjct: 656  KGHIQSGDGATTCDGSSGESTLSECKDS-STVTLSVGEPMSPALSSAAGSSSLKAS---- 710

Query: 588  SDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETE--SRNKPTXXXXXXXXX 761
                                S  +  ++D+   ++  Q++E E   R KPT         
Sbjct: 711  --------------------STPDGAKVDETSQRKSNQEIEPELLPRIKPTVFVLPLPAI 750

Query: 762  XXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
               YQDDWLKTS+++LQLWEKAPFEPYA PKP++
Sbjct: 751  LVGYQDDWLKTSASSLQLWEKAPFEPYASPKPIT 784


>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
          Length = 1812

 Score =  226 bits (577), Expect = 6e-57
 Identities = 127/279 (45%), Positives = 165/279 (59%), Gaps = 7/279 (2%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLD M ++VQQATSF               WLA+QEQ RR FSCGP+MVHAGCG
Sbjct: 917  RQPLQELLDGMAIIVQQATSFVDEALDADCGDGPYGWLALQEQWRRGFSCGPSMVHAGCG 976

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G L++CHSLD +G+EL+DPL +DV  ++V  L+ SD++ ALKSAFG   LDGPL   +WC
Sbjct: 977  GILASCHSLDIAGMELVDPLSADVNASSVFTLIQSDIKNALKSAFG--ILDGPLSATDWC 1034

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQQ 587
            KGR+ +G+ G + +  S E G N+ ++S+STVT   GEPI+P Q SA  S   KV     
Sbjct: 1035 KGRSQSGDVGTTGDGFSAEHGVNEGRDSSSTVT--IGEPISPSQSSAGGSSCIKVS---- 1088

Query: 588  SDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETE-------SRNKPTXXXX 746
                                SV++  R+DD   +R  Q+  +        SR +PT    
Sbjct: 1089 --------------------SVTDGARVDDTCRRRPNQEFSSSESEQQLGSRLRPTLFVL 1128

Query: 747  XXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
                    YQDDWLKTS+ +LQLWEKAP EPYA  KP++
Sbjct: 1129 PLPAILVGYQDDWLKTSANSLQLWEKAPLEPYALQKPMA 1167


>ref|XP_006858614.1| hypothetical protein AMTR_s00198p00028070 [Amborella trichopoda]
            gi|548862724|gb|ERN20081.1| hypothetical protein
            AMTR_s00198p00028070 [Amborella trichopoda]
          Length = 1989

 Score =  221 bits (564), Expect = 2e-55
 Identities = 129/273 (47%), Positives = 159/273 (58%), Gaps = 1/273 (0%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            KQPL ELLDAM +LVQQAT+F               WLA +EQ+RR FSCGP+MVHAGCG
Sbjct: 955  KQPLQELLDAMGLLVQQATAFVDLSLDADYGDGPFGWLAFEEQRRRGFSCGPSMVHAGCG 1014

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G L+ACHSLD +GVEL DPL +DV  ++V +LL SD+++ALKSAFG+ NLDGPL + +WC
Sbjct: 1015 GVLAACHSLDIAGVELFDPLSADVHSSSVISLLQSDLKIALKSAFGERNLDGPLPINDWC 1074

Query: 408  KGRANTGEGGH-SVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQ 584
            KGR  + EGG  S +  + E   ND+KES+STVT   GEPITPPQ SA          I+
Sbjct: 1075 KGRFQSIEGGSMSSDGCTVESMINDAKESSSTVTLGIGEPITPPQSSA---------GIK 1125

Query: 585  QSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETESRNKPTXXXXXXXXXX 764
             S+ QM                                       R+K T          
Sbjct: 1126 DSEQQM------------------------------------MPPRSKSTVMALSVPSIL 1149

Query: 765  XXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
              YQDDWLKTS+  +QL+EKAP EPYA PKP++
Sbjct: 1150 VGYQDDWLKTSANAIQLFEKAPLEPYALPKPMT 1182


>gb|EOY08938.1| RNA polymerase II transcription mediators isoform 3 [Theobroma cacao]
          Length = 1605

 Score =  221 bits (564), Expect = 2e-55
 Identities = 119/272 (43%), Positives = 161/272 (59%), Gaps = 1/272 (0%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLD + +LVQQATSF               WLA+QE  RR F CGP+MVHAGCG
Sbjct: 537  RQPLQELLDGIVLLVQQATSFVDLVLDADCGDGPYSWLALQEHWRRGFCCGPSMVHAGCG 596

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L++CHSLD +GVEL+DPL +++  ++V +LL+SD++ ALKSAFG  NLDGPL + +WC
Sbjct: 597  GTLASCHSLDIAGVELVDPLSANIHASSVISLLHSDIKSALKSAFG--NLDGPLSVTDWC 654

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQN-IQ 584
            KGR  +G+ G S +  S E   N+ ++S++TVT   GE ++P Q S   S   KV   + 
Sbjct: 655  KGRGQSGDVGASADGSSAESNTNECRDSSTTVTHSVGEAMSPSQTSVGGSSVLKVTGALD 714

Query: 585  QSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETESRNKPTXXXXXXXXXX 764
               ++    +R N+  S       + TR+                  +PT          
Sbjct: 715  GGKVEETSQRRLNQEISGSESEQQQCTRL------------------RPTLFVLPSPAIL 756

Query: 765  XXYQDDWLKTSSATLQLWEKAPFEPYARPKPV 860
              YQDDWLKTS+ +LQLWEKAP EPYA PKP+
Sbjct: 757  VGYQDDWLKTSANSLQLWEKAPLEPYALPKPI 788


>gb|EOY08937.1| RNA polymerase II transcription mediators isoform 2 [Theobroma cacao]
          Length = 1492

 Score =  221 bits (564), Expect = 2e-55
 Identities = 119/272 (43%), Positives = 161/272 (59%), Gaps = 1/272 (0%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLD + +LVQQATSF               WLA+QE  RR F CGP+MVHAGCG
Sbjct: 693  RQPLQELLDGIVLLVQQATSFVDLVLDADCGDGPYSWLALQEHWRRGFCCGPSMVHAGCG 752

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L++CHSLD +GVEL+DPL +++  ++V +LL+SD++ ALKSAFG  NLDGPL + +WC
Sbjct: 753  GTLASCHSLDIAGVELVDPLSANIHASSVISLLHSDIKSALKSAFG--NLDGPLSVTDWC 810

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQN-IQ 584
            KGR  +G+ G S +  S E   N+ ++S++TVT   GE ++P Q S   S   KV   + 
Sbjct: 811  KGRGQSGDVGASADGSSAESNTNECRDSSTTVTHSVGEAMSPSQTSVGGSSVLKVTGALD 870

Query: 585  QSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETESRNKPTXXXXXXXXXX 764
               ++    +R N+  S       + TR+                  +PT          
Sbjct: 871  GGKVEETSQRRLNQEISGSESEQQQCTRL------------------RPTLFVLPSPAIL 912

Query: 765  XXYQDDWLKTSSATLQLWEKAPFEPYARPKPV 860
              YQDDWLKTS+ +LQLWEKAP EPYA PKP+
Sbjct: 913  VGYQDDWLKTSANSLQLWEKAPLEPYALPKPI 944


>gb|EOY08936.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
          Length = 1985

 Score =  221 bits (564), Expect = 2e-55
 Identities = 119/272 (43%), Positives = 161/272 (59%), Gaps = 1/272 (0%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLD + +LVQQATSF               WLA+QE  RR F CGP+MVHAGCG
Sbjct: 917  RQPLQELLDGIVLLVQQATSFVDLVLDADCGDGPYSWLALQEHWRRGFCCGPSMVHAGCG 976

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L++CHSLD +GVEL+DPL +++  ++V +LL+SD++ ALKSAFG  NLDGPL + +WC
Sbjct: 977  GTLASCHSLDIAGVELVDPLSANIHASSVISLLHSDIKSALKSAFG--NLDGPLSVTDWC 1034

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQN-IQ 584
            KGR  +G+ G S +  S E   N+ ++S++TVT   GE ++P Q S   S   KV   + 
Sbjct: 1035 KGRGQSGDVGASADGSSAESNTNECRDSSTTVTHSVGEAMSPSQTSVGGSSVLKVTGALD 1094

Query: 585  QSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETESRNKPTXXXXXXXXXX 764
               ++    +R N+  S       + TR+                  +PT          
Sbjct: 1095 GGKVEETSQRRLNQEISGSESEQQQCTRL------------------RPTLFVLPSPAIL 1136

Query: 765  XXYQDDWLKTSSATLQLWEKAPFEPYARPKPV 860
              YQDDWLKTS+ +LQLWEKAP EPYA PKP+
Sbjct: 1137 VGYQDDWLKTSANSLQLWEKAPLEPYALPKPI 1168


>ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like [Citrus sinensis]
          Length = 1966

 Score =  218 bits (555), Expect = 2e-54
 Identities = 124/292 (42%), Positives = 172/292 (58%), Gaps = 11/292 (3%)
 Frame = +3

Query: 21   KETTVAGKSKQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCG 200
            +E  ++   +QPL ELLD +P+LVQQATSF               WLA+QE  R+ FSCG
Sbjct: 899  EEGMISYGQRQPLQELLDGLPLLVQQATSFVDVALDADCGDGPYGWLALQEHWRQEFSCG 958

Query: 201  PAMVHAGCGGSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLD 380
            P+MVHAGCGG+L++CHSLD +GVEL+DPL +D+  ++V +LL S++R ALKSAFG  +LD
Sbjct: 959  PSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQSEIRTALKSAFG--SLD 1016

Query: 381  GPLLLIEWCKGRANTGEGGHSVEAHS-GEGGP---NDSKESASTVTAVAGEPITPPQCSA 548
            GPL + +WCKGR      G SV+A + G+G     ++ ++S+ST+T   GE ++P Q S 
Sbjct: 1017 GPLSVTDWCKGR------GQSVDAAALGDGSTESISECRDSSSTIT--VGEALSPSQSSG 1068

Query: 549  ISSVSFKVQNIQQSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETE---- 716
              S S KV                            + T++D+ G +R+ QD+ +     
Sbjct: 1069 GGSSSLKV--------------------------AMDGTKLDETGQRRLNQDIGSSESDH 1102

Query: 717  ---SRNKPTXXXXXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
               +R KPT            YQDDWLKTS+ +LQ WEKAP EPYA PKP++
Sbjct: 1103 QLCARLKPTLFVLPSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPIT 1154


>ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
            gi|557548201|gb|ESR58830.1| hypothetical protein
            CICLE_v10014014mg [Citrus clementina]
          Length = 1967

 Score =  218 bits (555), Expect = 2e-54
 Identities = 124/292 (42%), Positives = 172/292 (58%), Gaps = 11/292 (3%)
 Frame = +3

Query: 21   KETTVAGKSKQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCG 200
            +E  ++   +QPL ELLD +P+LVQQATSF               WLA+QE  R+ FSCG
Sbjct: 900  EEGMISYGQRQPLQELLDGLPLLVQQATSFVDVALDADCGDGPYGWLALQEHWRQEFSCG 959

Query: 201  PAMVHAGCGGSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLD 380
            P+MVHAGCGG+L++CHSLD +GVEL+DPL +D+  ++V +LL S++R ALKSAFG  +LD
Sbjct: 960  PSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQSEIRTALKSAFG--SLD 1017

Query: 381  GPLLLIEWCKGRANTGEGGHSVEAHS-GEGGP---NDSKESASTVTAVAGEPITPPQCSA 548
            GPL + +WCKGR      G SV+A + G+G     ++ ++S+ST+T   GE ++P Q S 
Sbjct: 1018 GPLSVTDWCKGR------GQSVDAAALGDGSTESISECRDSSSTIT--VGEALSPSQSSG 1069

Query: 549  ISSVSFKVQNIQQSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETE---- 716
              S S KV                            + T++D+ G +R+ QD+ +     
Sbjct: 1070 GGSSSLKV--------------------------AMDGTKLDETGQRRLNQDIGSSESDH 1103

Query: 717  ---SRNKPTXXXXXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
               +R KPT            YQDDWLKTS+ +LQ WEKAP EPYA PKP++
Sbjct: 1104 QLCARLKPTLFVLPSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPIT 1155


>ref|XP_006445589.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
            gi|557548200|gb|ESR58829.1| hypothetical protein
            CICLE_v10014014mg [Citrus clementina]
          Length = 1742

 Score =  218 bits (555), Expect = 2e-54
 Identities = 124/292 (42%), Positives = 172/292 (58%), Gaps = 11/292 (3%)
 Frame = +3

Query: 21   KETTVAGKSKQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCG 200
            +E  ++   +QPL ELLD +P+LVQQATSF               WLA+QE  R+ FSCG
Sbjct: 675  EEGMISYGQRQPLQELLDGLPLLVQQATSFVDVALDADCGDGPYGWLALQEHWRQEFSCG 734

Query: 201  PAMVHAGCGGSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLD 380
            P+MVHAGCGG+L++CHSLD +GVEL+DPL +D+  ++V +LL S++R ALKSAFG  +LD
Sbjct: 735  PSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQSEIRTALKSAFG--SLD 792

Query: 381  GPLLLIEWCKGRANTGEGGHSVEAHS-GEGGP---NDSKESASTVTAVAGEPITPPQCSA 548
            GPL + +WCKGR      G SV+A + G+G     ++ ++S+ST+T   GE ++P Q S 
Sbjct: 793  GPLSVTDWCKGR------GQSVDAAALGDGSTESISECRDSSSTIT--VGEALSPSQSSG 844

Query: 549  ISSVSFKVQNIQQSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETE---- 716
              S S KV                            + T++D+ G +R+ QD+ +     
Sbjct: 845  GGSSSLKV--------------------------AMDGTKLDETGQRRLNQDIGSSESDH 878

Query: 717  ---SRNKPTXXXXXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
               +R KPT            YQDDWLKTS+ +LQ WEKAP EPYA PKP++
Sbjct: 879  QLCARLKPTLFVLPSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPIT 930


>ref|XP_006340094.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like isoform X2 [Solanum tuberosum]
          Length = 1962

 Score =  218 bits (554), Expect = 3e-54
 Identities = 124/290 (42%), Positives = 169/290 (58%), Gaps = 9/290 (3%)
 Frame = +3

Query: 12   SKMKETTVAGKSKQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRF 191
            S ++++ +A   +QPL ELLD M +LVQQATSF               WLA+QEQ RR F
Sbjct: 910  SFIEDSMLAYGLRQPLQELLDGMALLVQQATSFVDVALDADSNDGSYGWLALQEQWRRGF 969

Query: 192  SCGPAMVHAGCGGSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDS 371
            SC P+MVHAGCGG L++CHSLD +GVELIDPL +DV  +    LL +D++ ALKSAF  S
Sbjct: 970  SCRPSMVHAGCGGVLASCHSLDIAGVELIDPLSADVQASFTLTLLQNDIKAALKSAF--S 1027

Query: 372  NLDGPLLLIEWCKGRANTGEGGHSVEAHSGE--GGPNDSKESASTVTAVAGEPITPPQCS 545
             ++GPL +++WCKGR+ + +GG S +  S E     ++ ++S+ST++   GEPI+P Q S
Sbjct: 1028 TMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISLSVGEPISPSQSS 1087

Query: 546  AISSVSFKVQNIQQSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDL---ETE 716
            A  S S +                             +  R+D+A  +R+ QD    ++E
Sbjct: 1088 AGGSSSLR-----------------------------DGIRVDEASERRLSQDTCLSDSE 1118

Query: 717  ----SRNKPTXXXXXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPK 854
                SR +PT            YQDDWLKTS ++LQ WEKAPFEPYA PK
Sbjct: 1119 QLPGSRLRPTLAAVPYPAILVGYQDDWLKTSPSSLQFWEKAPFEPYAMPK 1168


>ref|XP_006340093.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like isoform X1 [Solanum tuberosum]
          Length = 1989

 Score =  218 bits (554), Expect = 3e-54
 Identities = 124/290 (42%), Positives = 169/290 (58%), Gaps = 9/290 (3%)
 Frame = +3

Query: 12   SKMKETTVAGKSKQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRF 191
            S ++++ +A   +QPL ELLD M +LVQQATSF               WLA+QEQ RR F
Sbjct: 910  SFIEDSMLAYGLRQPLQELLDGMALLVQQATSFVDVALDADSNDGSYGWLALQEQWRRGF 969

Query: 192  SCGPAMVHAGCGGSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDS 371
            SC P+MVHAGCGG L++CHSLD +GVELIDPL +DV  +    LL +D++ ALKSAF  S
Sbjct: 970  SCRPSMVHAGCGGVLASCHSLDIAGVELIDPLSADVQASFTLTLLQNDIKAALKSAF--S 1027

Query: 372  NLDGPLLLIEWCKGRANTGEGGHSVEAHSGE--GGPNDSKESASTVTAVAGEPITPPQCS 545
             ++GPL +++WCKGR+ + +GG S +  S E     ++ ++S+ST++   GEPI+P Q S
Sbjct: 1028 TMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISLSVGEPISPSQSS 1087

Query: 546  AISSVSFKVQNIQQSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDL---ETE 716
            A  S S +                             +  R+D+A  +R+ QD    ++E
Sbjct: 1088 AGGSSSLR-----------------------------DGIRVDEASERRLSQDTCLSDSE 1118

Query: 717  ----SRNKPTXXXXXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPK 854
                SR +PT            YQDDWLKTS ++LQ WEKAPFEPYA PK
Sbjct: 1119 QLPGSRLRPTLAAVPYPAILVGYQDDWLKTSPSSLQFWEKAPFEPYAMPK 1168


>ref|XP_004296201.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like [Fragaria vesca subsp. vesca]
          Length = 1952

 Score =  213 bits (541), Expect = 9e-53
 Identities = 119/274 (43%), Positives = 164/274 (59%), Gaps = 2/274 (0%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLD + ++VQQAT+F               WLA+QEQ R+ FSCGP+M+HAGCG
Sbjct: 906  RQPLQELLDGITLIVQQATAFVDLALDSDCGDGPYGWLALQEQWRKGFSCGPSMIHAGCG 965

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L++CHSLD +GVEL DPL +DV  ++V +LL SD++MALKSAFG   LDGPL + +WC
Sbjct: 966  GTLASCHSLDIAGVELTDPLSADVHASSVISLLQSDIKMALKSAFG--MLDGPLSVTDWC 1023

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVS--FKVQNI 581
            KGR  +GE   +V+  SGE   +D ++S+STV    GEP++P      + +   F + + 
Sbjct: 1024 KGRNQSGE--TTVDGLSGESTISDCRDSSSTVALSTGEPLSPSPSVGSAGLKGLFSLTSQ 1081

Query: 582  QQSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETESRNKPTXXXXXXXXX 761
            ++S+ + C                SES             DL+  +R +PT         
Sbjct: 1082 RRSNPENCS---------------SES-------------DLQMSARLRPTLLVAPSPAI 1113

Query: 762  XXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
               YQDDWLKTS+++L LWEKAP EPYA  KP+S
Sbjct: 1114 LVGYQDDWLKTSASSLHLWEKAPLEPYALQKPIS 1147


>ref|XP_004237346.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like [Solanum lycopersicum]
          Length = 1987

 Score =  208 bits (530), Expect = 2e-51
 Identities = 121/283 (42%), Positives = 165/283 (58%), Gaps = 2/283 (0%)
 Frame = +3

Query: 12   SKMKETTVAGKSKQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRF 191
            S ++++ +A   +QPL ELLD M +LVQQATSF               WLA+QEQ RR F
Sbjct: 908  SFIEDSMLAYGLRQPLQELLDGMALLVQQATSFVDVALDADNNDGSYGWLALQEQWRRGF 967

Query: 192  SCGPAMVHAGCGGSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDS 371
            SC P+MVHAGCGG L++CHSLD +GVELIDPL +DV  +    LL +D++ ALKSAF  S
Sbjct: 968  SCRPSMVHAGCGGVLASCHSLDIAGVELIDPLSADVQASFTLTLLQNDIKAALKSAF--S 1025

Query: 372  NLDGPLLLIEWCKGRANTGEGGHSVEAHSGEG--GPNDSKESASTVTAVAGEPITPPQCS 545
             ++GPL +++WCKGR+ + +GG S +  S E     ++ ++S+ST++   GEPI+P Q S
Sbjct: 1026 TMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISLSVGEPISPSQSS 1085

Query: 546  AISSVSFKVQNIQQSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETESRN 725
            A  S S +  +     +         +  S D   +SES ++               SR 
Sbjct: 1086 AGGSSSLRGMDYHGHTV--------TRRLSQDT-CLSESEQLPG-------------SRL 1123

Query: 726  KPTXXXXXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPK 854
            + T            YQDDWLKTS ++LQ WEKAPFEPYA PK
Sbjct: 1124 RATLAAVPYPAILVGYQDDWLKTSPSSLQFWEKAPFEPYAMPK 1166


>ref|XP_004159367.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like [Cucumis sativus]
          Length = 1925

 Score =  201 bits (512), Expect = 2e-49
 Identities = 114/280 (40%), Positives = 153/280 (54%), Gaps = 8/280 (2%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLDA P++VQQATSF               WLA+QEQ RR FSCGP+MVHAGCG
Sbjct: 882  RQPLQELLDAFPLIVQQATSFVDLALDAECGDGPYGWLALQEQWRRGFSCGPSMVHAGCG 941

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L++CH+LD +GVEL+DPL +DV   +V +LL SD++ ALKSAFG   LDGPL +I+WC
Sbjct: 942  GTLASCHALDIAGVELVDPLTADVYAPSVMSLLQSDMKTALKSAFG--TLDGPLSVIDWC 999

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQQ 587
            KGR   G+ G + +  S E   N+SK+S+S+ T                           
Sbjct: 1000 KGRGQLGDSGSTGDGLSAESIVNESKDSSSSTT--------------------------- 1032

Query: 588  SDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETE--------SRNKPTXXX 743
                                   + +++D+   +R  Q++ +         SR +PT   
Sbjct: 1033 ----------------------MDGSKMDETSQRRSNQEICSSGSDQQLLPSRLRPTVLV 1070

Query: 744  XXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
                     YQDDWLKTS+ +LQLWEKAP EPYA  KP++
Sbjct: 1071 LPSPAILVGYQDDWLKTSANSLQLWEKAPLEPYAVQKPIN 1110


>ref|XP_004502200.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like isoform X1 [Cicer arietinum]
          Length = 1949

 Score =  201 bits (511), Expect = 3e-49
 Identities = 117/285 (41%), Positives = 160/285 (56%), Gaps = 4/285 (1%)
 Frame = +3

Query: 21   KETTVAGKSKQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCG 200
            +E+ ++   ++PL ELLD + +LVQQATSF                LA+QEQ RR F CG
Sbjct: 906  EESLLSYGQRKPLQELLDGIALLVQQATSFVDLALDADCGDGPYGLLAMQEQWRRGFCCG 965

Query: 201  PAMVHAGCGGSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLD 380
            P+MVHAGCGG+L++ HSLD +G+EL+DPL SDV  + V +LL SD++ ALKSAF  SNL+
Sbjct: 966  PSMVHAGCGGTLASSHSLDIAGLELVDPLSSDVHASTVISLLQSDIKTALKSAF--SNLE 1023

Query: 381  GPLLLIEWCKGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSV 560
            GPL + +WCKGR    + G  V+  S E   ++ ++S+        EP++P Q S   S 
Sbjct: 1024 GPLSVTDWCKGRNQLVDTGSIVDGVSAESSISECRDSS--------EPMSPSQSSVCGSS 1075

Query: 561  SFKVQNIQQSDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETE----SRNK 728
            S KV                         S+ ++ ++D+   +R  QD E+E    SR K
Sbjct: 1076 SIKVS------------------------SIMDNAKVDETSQRRSGQDSESEQHPSSRLK 1111

Query: 729  PTXXXXXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
            PT            YQDDWLK S+  LQ WEKAP EPYA  KP++
Sbjct: 1112 PTLIAVPLPSILVGYQDDWLKASANCLQHWEKAPLEPYALQKPIT 1156


>gb|EXC34516.1| Mediator of RNA polymerase II transcription subunit 13-like protein
            [Morus notabilis]
          Length = 1710

 Score =  201 bits (510), Expect = 4e-49
 Identities = 116/279 (41%), Positives = 158/279 (56%), Gaps = 7/279 (2%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLD M +LVQQATSF                LA+QEQ R+ FSCGP+MVHAGCG
Sbjct: 653  RQPLQELLDGMALLVQQATSFVDLALDTDCGDGPCGLLALQEQWRKGFSCGPSMVHAGCG 712

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L++CHSLD +GVEL DPL +DV  ++V +LL SD++ ALKSAF    LDGPL + +WC
Sbjct: 713  GTLASCHSLDIAGVELTDPLSADVYASSVISLLQSDIKTALKSAF--DALDGPLSVTDWC 770

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQQ 587
            KGR  +GE G   + +S E    + ++S+ +     G+ ++P Q S   S  FK      
Sbjct: 771  KGRNQSGESGSVGDGYSAESTITECRDSSGSAAVSIGDSMSPSQSSGGPS-GFK------ 823

Query: 588  SDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQD---LETESRN----KPTXXXX 746
                                   +  ++D+ G +R  Q+    E E +N    +P+    
Sbjct: 824  -----------------------DGGKMDETGQRRSNQENCGSEGEQQNFFRLRPSLFVV 860

Query: 747  XXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
                    YQDDWLKTS+++LQLWEKAPFEPYA  KP++
Sbjct: 861  PLPSILVGYQDDWLKTSASSLQLWEKAPFEPYALQKPIT 899


>ref|XP_004144140.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like [Cucumis sativus]
          Length = 1926

 Score =  200 bits (508), Expect = 6e-49
 Identities = 113/280 (40%), Positives = 152/280 (54%), Gaps = 8/280 (2%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            +QPL ELLDA P++VQQATSF               WLA+QEQ RR FSCGP+MVHAGCG
Sbjct: 882  RQPLQELLDAFPLIVQQATSFVDLALDAECGDGPYGWLALQEQWRRGFSCGPSMVHAGCG 941

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            G+L++CH+LD +GVEL+DPL +DV   +V +LL SD++ ALKSAFG   LDGPL +I+WC
Sbjct: 942  GTLASCHALDIAGVELVDPLTADVYAPSVMSLLQSDMKTALKSAFG--TLDGPLSVIDWC 999

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQQ 587
            KGR   G+ G + +  S E   N+SK+S+S+ T                           
Sbjct: 1000 KGRGQLGDSGSTGDGLSAESIVNESKDSSSSTT--------------------------- 1032

Query: 588  SDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDLETES--------RNKPTXXX 743
                                   + +++D+   +R  Q++ +          R +PT   
Sbjct: 1033 ----------------------MDGSKMDETSQRRSNQEICSSGSDQQLLPLRLRPTVLL 1070

Query: 744  XXXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
                     YQDDWLKTS+ +LQLWEKAP EPYA  KP++
Sbjct: 1071 LPSPAILVGYQDDWLKTSANSLQLWEKAPLEPYAVQKPIN 1110


>ref|XP_006591430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like isoform X3 [Glycine max]
          Length = 1951

 Score =  197 bits (500), Expect = 5e-48
 Identities = 118/279 (42%), Positives = 154/279 (55%), Gaps = 7/279 (2%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            ++PL ELLD + +LVQQA SF                LA+QEQ RR F CGP+MVHAGCG
Sbjct: 918  RKPLQELLDGIALLVQQAISFVDLALDADCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCG 977

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            GSL++ HSLD +G+EL+DPL +DV  + V +LL SD++ ALKSAF  SNL+GPL + +WC
Sbjct: 978  GSLASSHSLDIAGLELVDPLSADVDASTVISLLQSDIKTALKSAF--SNLEGPLSVTDWC 1035

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQQ 587
            KGR    + G  V+  S E   N+ ++S+        EP++P Q S   S S KV N+  
Sbjct: 1036 KGRNQLVDTGSIVDGVSAESSINECRDSS--------EPMSPSQSSVGGSSSIKVSNLMD 1087

Query: 588  SDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDL-ETE------SRNKPTXXXX 746
                                      ++D+   +R  QDL  TE      SR KPT    
Sbjct: 1088 --------------------------KVDETSQRRSGQDLCSTELEQLSCSRLKPTLIAL 1121

Query: 747  XXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
                    YQDDWLKTS+ +LQ WEKAP EPYA  KP++
Sbjct: 1122 PFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPIT 1160


>ref|XP_006601869.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like isoform X2 [Glycine max]
          Length = 1951

 Score =  195 bits (496), Expect = 2e-47
 Identities = 116/279 (41%), Positives = 153/279 (54%), Gaps = 7/279 (2%)
 Frame = +3

Query: 48   KQPLHELLDAMPMLVQQATSFSXXXXXXXXXXXXXXWLAVQEQQRRRFSCGPAMVHAGCG 227
            ++PL ELLD + +LVQQA SF                LA+QEQ RR F CGP+MVHAGCG
Sbjct: 917  RKPLQELLDGIALLVQQAISFVDLALDVDCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCG 976

Query: 228  GSLSACHSLDASGVELIDPLFSDVTPAAVANLLYSDVRMALKSAFGDSNLDGPLLLIEWC 407
            GSL++ HSLD +G+EL+DPL +DV  + V +LL SD++ ALKSAF   NL+GPL + +WC
Sbjct: 977  GSLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKSAF--PNLEGPLSVTDWC 1034

Query: 408  KGRANTGEGGHSVEAHSGEGGPNDSKESASTVTAVAGEPITPPQCSAISSVSFKVQNIQQ 587
            KGR    + G  V+  S E   N+ ++S+        EP++P Q S   S S KV N+  
Sbjct: 1035 KGRNQLIDTGSVVDGVSAESNINECRDSS--------EPMSPSQSSVGGSSSIKVSNMMD 1086

Query: 588  SDIQMCEVQRGNKSWSVDNFSVSESTRIDDAGHKRVPQDL-------ETESRNKPTXXXX 746
                                      ++D+   +R  QDL       +T SR KPT    
Sbjct: 1087 --------------------------KVDETSQRRSGQDLCSTESEQQTCSRLKPTLIAL 1120

Query: 747  XXXXXXXXYQDDWLKTSSATLQLWEKAPFEPYARPKPVS 863
                    YQDDWLKTS+ +LQ WEKAP EPYA  KP++
Sbjct: 1121 PFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPIT 1159