BLASTX nr result

ID: Ephedra26_contig00016372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016372
         (482 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17384.1| unknown [Picea sitchensis]                             185   5e-45
gb|ACN41214.1| unknown [Picea sitchensis]                             147   2e-33
ref|XP_001775093.1| predicted protein [Physcomitrella patens] gi...   109   3e-22

>gb|ABR17384.1| unknown [Picea sitchensis]
          Length = 307

 Score =  185 bits (470), Expect = 5e-45
 Identities = 95/158 (60%), Positives = 120/158 (75%)
 Frame = +3

Query: 9   SAENYLSPAGKQLSSLLVTSESIFVQRNACAALSAIMNSSFQNYKTIVQLPSLMERLLLC 188
           SAE YL PA  QLS LL  + SI V+RNACAAL+AIMN+S  +Y  + +   LMERLL C
Sbjct: 78  SAEPYLLPAVTQLSLLLENAGSIHVRRNACAALTAIMNASLHHYIAVAESSHLMERLLQC 137

Query: 189 LEDNNSDKALQINVVSAISIMAQHSEGLKIIQAAEADTKLISLLDSNDDTKLEEEITDAL 368
           LE+ + DK LQINVV+A++++AQ  EGL++I+  EAD KL+SLL+  DD  LEEEITDAL
Sbjct: 138 LENEDGDKGLQINVVAAVTVLAQRGEGLQVIKETEADVKLLSLLECTDDASLEEEITDAL 197

Query: 369 CALAVHEEMRPYLVTKGIIPKFVRKLKADSTEICVRVL 482
           CALAVH+EMR +LV KG + +   KL+ DS+EICVRVL
Sbjct: 198 CALAVHQEMRSHLVMKGAVSRLAVKLRTDSSEICVRVL 235


>gb|ACN41214.1| unknown [Picea sitchensis]
          Length = 194

 Score =  147 bits (370), Expect = 2e-33
 Identities = 71/122 (58%), Positives = 93/122 (76%)
 Frame = +3

Query: 117 MNSSFQNYKTIVQLPSLMERLLLCLEDNNSDKALQINVVSAISIMAQHSEGLKIIQAAEA 296
           MN+S  +Y  + +   LMERLL CLE+ + DK LQINVV+A++++AQ  EGL++I+  EA
Sbjct: 1   MNASLHHYIAVAESSHLMERLLQCLENEDGDKGLQINVVAAVTVLAQRGEGLQVIKETEA 60

Query: 297 DTKLISLLDSNDDTKLEEEITDALCALAVHEEMRPYLVTKGIIPKFVRKLKADSTEICVR 476
           D KL+SLL+  DD  LEEEITDALCALAVH+EMR +LV KG + +   KL+ DS+EICVR
Sbjct: 61  DVKLLSLLECTDDASLEEEITDALCALAVHQEMRSHLVMKGAVSRLAVKLRTDSSEICVR 120

Query: 477 VL 482
           VL
Sbjct: 121 VL 122


>ref|XP_001775093.1| predicted protein [Physcomitrella patens]
           gi|162673544|gb|EDQ60065.1| predicted protein
           [Physcomitrella patens]
          Length = 395

 Score =  109 bits (273), Expect = 3e-22
 Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
 Frame = +3

Query: 66  SESIFVQRNACAALSAIMNSSFQNYKTIVQLPSLMERLLLCLEDNNS---DKALQINVVS 236
           S S+ VQRNACAAL++IM +    Y    + P L E L+ CL+ +     D+ LQ+N  +
Sbjct: 142 SLSVHVQRNACAALTSIMTADPSLYLAAAKTPMLGEGLVQCLKGDGESPFDEGLQLNAAA 201

Query: 237 AISIMAQHSEGLKIIQAAEADTKLISLLDSNDDTKLEEEITDALCALAVHEEMRPYLVTK 416
            IS++AQ  EGL ++Q A+A+  +IS L S  D  ++EEI DALCAL+ H ++R  L  K
Sbjct: 202 GISVLAQSVEGLLVLQEADAENAIISSLCSASDANVKEEIVDALCALSSHPDIRNSLFLK 261

Query: 417 GIIPKFVRKLKADSTEICVRVL 482
           G + +  + ++  S EICVR L
Sbjct: 262 GAVEQLAKVIQGASAEICVRGL 283


Top