BLASTX nr result

ID: Ephedra26_contig00016339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016339
         (1106 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40752.1| unknown [Picea sitchensis]                             106   1e-20

>gb|ACN40752.1| unknown [Picea sitchensis]
          Length = 885

 Score =  106 bits (265), Expect = 1e-20
 Identities = 107/354 (30%), Positives = 148/354 (41%), Gaps = 78/354 (22%)
 Frame = -2

Query: 1105 EKMACTRMECASMHGRFEEVTFHVEGGAEYSSFLAGDAPPLSNGSFDAHLRHHEHDWGXX 926
            E + CTR+ECA+MHGRFEEVTF V    ++SS++  +AP +S+GS D       HDW   
Sbjct: 503  EIVPCTRVECAAMHGRFEEVTFQV-NATDFSSYVEEEAPTISSGSSDV----LHHDWVNG 557

Query: 925  XXXXXXXXXXXXXXXXXXXXXNDASLL---------------------TKHHQHFAEEDT 809
                                   + L+                     T +  +F E  +
Sbjct: 558  EDPVSPGSFMSHGSGASNFEDPQSCLISSVTGNKEDVVPSKPAKPPEKTGYVDNFEESWS 617

Query: 808  RHCS---SPSSNADFNDS--------------SLSDEED-DAITRNLRLLAIRHQRELRE 683
               S   SP +++D   S               +  +ED D+ +R LRLLA++HQ+EL E
Sbjct: 618  HGLSEGFSPVTHSDCLSSVHKPMLHPQSPSSVKILSDEDEDSTSRELRLLAVKHQKELME 677

Query: 682  LQFRHEHALLEIEQHLQRRKARRSSNTK---------------CSGCYNPRE-----MGV 563
            LQ +HEH+LLEIE  L+     RS   K                +G    RE      G 
Sbjct: 678  LQRKHEHSLLEIENELKNTTPLRSPLDKKKSSPGINFQDQKLNVNGQQEHREDDSVRHGT 737

Query: 562  DSPKKVGCPSMTLSTKVRMEYQES--SSRNSPRSVLYGGRSP------VSSSPN------ 425
                K       L + VR     S  S R SP+        P      + SSP       
Sbjct: 738  IGRDKEFAAMKQLGSDVRGTRLSSNASHRISPKDPAVSSDFPGPRKLAMHSSPTPPVRPI 797

Query: 424  -----ENQKLMKMHSFNDVDSQLYDHNSMPKEVCKLKRAQTIATYRTDRLREIK 278
                  NQ+LMKMHSF+ VDSQ +  NS+ +EV + +  QTI  +RT  L + K
Sbjct: 798  NRNIAPNQRLMKMHSFSGVDSQ-HSINSLAREVSRQRNYQTIGAFRTGNLDDKK 850


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