BLASTX nr result
ID: Ephedra26_contig00016306
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00016306 (1022 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006842072.1| hypothetical protein AMTR_s00078p00055040 [A... 252 2e-64 ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutr... 236 8e-60 dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila] 236 8e-60 ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 235 2e-59 ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 235 2e-59 ref|XP_006842073.1| hypothetical protein AMTR_s00078p00056260 [A... 234 3e-59 ref|XP_003561343.1| PREDICTED: probable RNA-dependent RNA polyme... 234 4e-59 ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 233 9e-59 ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ... 228 3e-57 gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis] 228 4e-57 ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis... 227 5e-57 gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao] 227 7e-57 ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 227 7e-57 ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps... 226 9e-57 ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 226 1e-56 gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L... 226 1e-56 gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe... 225 2e-56 ref|XP_002457941.1| hypothetical protein SORBIDRAFT_03g022880 [S... 225 2e-56 gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu... 225 2e-56 tpg|DAA54873.1| TPA: hypothetical protein ZEAMMB73_768916 [Zea m... 223 7e-56 >ref|XP_006842072.1| hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda] gi|548844121|gb|ERN03747.1| hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda] Length = 1207 Score = 252 bits (643), Expect = 2e-64 Identities = 130/298 (43%), Positives = 180/298 (60%), Gaps = 6/298 (2%) Frame = +1 Query: 145 KLKMESTQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKFISSTNFIV 324 K K+ TQ+SIGGF +AK+L +YLE+ +G++ RCRLK S+TPP SYP + + + Sbjct: 10 KKKLVITQVSIGGFDERTSAKELTEYLERAVGSIMRCRLKRSLTPPNSYPDYEVDASQVR 69 Query: 325 H--NPARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSETYSRFQRRRNIN 498 + RV+PH FV F P K ++ + L + LKVH G + R R+ Sbjct: 70 RTIDVTRVIPHAFVHFAIPKCAKRAETLSGKCALILDSSPLKVHVGMNSSFRVAWRKTTL 129 Query: 499 PFRFTKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKND 669 P +F K+++GSL + E+ V W+ VDFHVDP+D C +F TKD FS +D Sbjct: 130 PIKFENCKVQIGSLFSWSEFWVGWEGPNLGVDFHVDPYDGTCGVFFTKDITFSIKDSNQK 189 Query: 670 TVILCEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLD 849 VI C+ K+EF + RDI+ V E+ ++ + ++L P IYYRT +DD HVTVPF LLD Sbjct: 190 VVIKCDMKLEFPI-RDIQWVHFFQEQASLGMLVQLSSSPLIYYRTDNDDTHVTVPFLLLD 248 Query: 850 DDDPWIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLLGETV-ERVFG 1020 D+DPWIRT DFT N A GRC CY++S SPR G ME+A+ YF +L V ++V G Sbjct: 249 DEDPWIRTTDFTGNGAVGRCRCYKISFSPRYGLKMEKARDYFRECRILEHGVLQKVLG 306 >ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum] gi|557105252|gb|ESQ45586.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum] Length = 927 Score = 236 bits (603), Expect = 8e-60 Identities = 133/286 (46%), Positives = 175/286 (61%), Gaps = 5/286 (1%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFI--VHNP 333 TQ+SIGGFG TAK+L DYLE +G + RCRLK S TPP SYP F I+ T+ I ++ Sbjct: 29 TQVSIGGFGQSTTAKELTDYLEHEVGHIWRCRLKNSWTPPGSYPNFEIADTSNIRNFNDY 88 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 RV PH FV F++P + + A + L +G LKV G E Y+ QRRR P + Sbjct: 89 KRVEPHAFVHFVSPESAACAMDAAGQCKLILDGQPLKVSLGPENPYTLNQRRRTTTPLKL 148 Query: 511 TKAKIEVGSLVTPEEYLVAWQ-DIVDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVILCE 687 + +E+G+LV+ +E+LV+W+ + VDF VDPFD+ CR TK FS +D VI C+ Sbjct: 149 SGISVEIGTLVSRDEFLVSWRAEKVDFLVDPFDNTCRFCFTKSTAFSLKDTMRHAVINCD 208 Query: 688 FKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDPWI 867 +K+E V RDI++V+ VL ++L P ++YRTADDDI+ T P LLDDDDPWI Sbjct: 209 YKLELLV-RDIRTVRQYRASDGFVLLLQLASSPRVWYRTADDDIYETCPVDLLDDDDPWI 267 Query: 868 RTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLLGETV 1005 RT DFT A GRCL YRV LSPR + + A Y R + E V Sbjct: 268 RTTDFTQAGAIGRCLSYRVLLSPRYENKLISALDYLRRQRVKEERV 313 >dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila] Length = 998 Score = 236 bits (603), Expect = 8e-60 Identities = 133/286 (46%), Positives = 175/286 (61%), Gaps = 5/286 (1%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFI--VHNP 333 TQ+SIGGFG TAK+L DYLE +G + RCRLK S TPP SYP F I+ T+ I ++ Sbjct: 13 TQVSIGGFGQSTTAKELTDYLEHEVGHIWRCRLKNSWTPPGSYPNFEIADTSNIRNFNDY 72 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 RV PH FV F++P + + A + L +G LKV G E Y+ QRRR P + Sbjct: 73 KRVEPHAFVHFVSPESAACAMDAAGQCKLILDGQPLKVSLGPENPYTLNQRRRTTTPLKL 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQ-DIVDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVILCE 687 + +E+G+LV+ +E+LV+W+ + VDF VDPFD+ CR TK FS +D VI C+ Sbjct: 133 SGISVEIGTLVSRDEFLVSWRAEKVDFLVDPFDNTCRFCFTKSTAFSLKDTMRHAVINCD 192 Query: 688 FKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDPWI 867 +K+E V RDI++V+ VL ++L P ++YRTADDDI+ T P LLDDDDPWI Sbjct: 193 YKLELLV-RDIRTVRQYRASDGFVLLLQLASSPRVWYRTADDDIYETCPVDLLDDDDPWI 251 Query: 868 RTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLLGETV 1005 RT DFT A GRCL YRV LSPR + + A Y R + E V Sbjct: 252 RTTDFTQAGAIGRCLSYRVLLSPRYENKLISALDYLRRQRVKEERV 297 >ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis] gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus communis] Length = 1203 Score = 235 bits (600), Expect = 2e-59 Identities = 133/290 (45%), Positives = 172/290 (59%), Gaps = 7/290 (2%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFIVHNPA- 336 TQ+S GGF VTA+DL YL+ IG V RCRLKTS TPP SYP F I+ T I A Sbjct: 13 TQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDTAVIQRVDAY 72 Query: 337 -RVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 RV PH FV F +P + A L FNG +KV G E + QRRR PF+ Sbjct: 73 RRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTTIPFKL 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVIL 681 + +E+G+LV+ +E+LV W+ VDF VDPFD C+ T+D FS + VI Sbjct: 133 SDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTEHAVIR 192 Query: 682 CEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDP 861 C+FK+EF V RDI +K + +V+ ++L PS++YRTADDDI V VPF LLDDDDP Sbjct: 193 CDFKLEFLV-RDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLDDDDP 251 Query: 862 WIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLLGETVER 1011 WIRT DFT + A GRC YRVS+ PR G +++A + + + + R Sbjct: 252 WIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLRR 301 >ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera] Length = 1197 Score = 235 bits (600), Expect = 2e-59 Identities = 134/280 (47%), Positives = 169/280 (60%), Gaps = 7/280 (2%) Frame = +1 Query: 154 MESTQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFI--V 324 M TQISIGGF VTA +L YLE IG+V RCRLKTS TPP SYP F I T I Sbjct: 10 MVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEIIDTAKIERT 69 Query: 325 HNPARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINP 501 + +V PH FV F++P A + A + L +G LKV G ET + QRRR P Sbjct: 70 EDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQRRRTTFP 129 Query: 502 FRFTKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDT 672 F+F ++E+G LV+ +EY W+ VDF VDPFD C+ TKD FS + Sbjct: 130 FKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAFSFKGMPKHA 189 Query: 673 VILCEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDD 852 VI C FK+EF V R+I V+ + +++L ++L P +YYRTADDDI TVPF LLDD Sbjct: 190 VIKCNFKVEFLV-REINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEETVPFDLLDD 248 Query: 853 DDPWIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 DDPWIRT DFT + A GRC YR+S+ PR G +++A Y Sbjct: 249 DDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDY 288 >ref|XP_006842073.1| hypothetical protein AMTR_s00078p00056260 [Amborella trichopoda] gi|548844122|gb|ERN03748.1| hypothetical protein AMTR_s00078p00056260 [Amborella trichopoda] Length = 1207 Score = 234 bits (598), Expect = 3e-59 Identities = 124/292 (42%), Positives = 173/292 (59%), Gaps = 5/292 (1%) Frame = +1 Query: 145 KLKMESTQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKFISSTNFIV 324 K K+ TQISI GF G +A+ L +YLE +G++ RC+LK S+TPP SYP + + + Sbjct: 10 KKKLVITQISIAGFDEGTSAQQLVEYLEGAVGSIIRCKLKRSLTPPNSYPDYKIDASQVR 69 Query: 325 HN--PARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSETYSRFQRRRNIN 498 RV+PH FV F P + ++ + L LK H G + R RR+ Sbjct: 70 RTIEVTRVIPHAFVHFAIPKCAERAQTLSGKCALILGSSPLKAHVGMNSSFRVARRKTTP 129 Query: 499 PFRFTKAKIEVGSLVTPEEYLVAWQ--DI-VDFHVDPFDDCCRIFLTKDQLFSTRDKKND 669 P F K+++GSL + E+LV W+ D+ V+FHVDP+D C I +D +FS +D + Sbjct: 130 PNVFKNCKVQIGSLFSESEFLVGWEGPDLGVNFHVDPYDGTCGICFPRDIVFSVKDTNHK 189 Query: 670 TVILCEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLD 849 VI C+ K+EF V RDI+ V E+ ++ + ++L P IYYRT +DD HVTVPF LLD Sbjct: 190 AVIKCDLKLEFPV-RDIQWVHFFEEQTSLGMLMQLSSSPLIYYRTDNDDTHVTVPFPLLD 248 Query: 850 DDDPWIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLLGETV 1005 D+DPWIRT DF+ N A GRC CY++S SPR G E+A+ YF +L V Sbjct: 249 DEDPWIRTTDFSVNGALGRCHCYKISFSPRHGLIREKARDYFRECRILEHEV 300 >ref|XP_003561343.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Brachypodium distachyon] Length = 1208 Score = 234 bits (597), Expect = 4e-59 Identities = 130/290 (44%), Positives = 171/290 (58%), Gaps = 12/290 (4%) Frame = +1 Query: 160 STQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKFISSTNFIVHNPA- 336 +TQ+S+GGFG GV+A +LAD+LE G V RCR+KTS TPP S+P F+ ST P Sbjct: 18 TTQVSLGGFGAGVSASELADFLEYEAGLVWRCRVKTSWTPPDSFPDFLRSTASASGAPPP 77 Query: 337 ---RVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSETYSRFQRRRNINPFR 507 RV PH FV F P A + A + L F G L + S++ R RR+NI PFR Sbjct: 78 PYDRVPPHAFVHFARPEAARRATDAAGKSELLFGGKPLLIASASDSSLRASRRQNIKPFR 137 Query: 508 FTKAKIEVGSLVTP-----EEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKK 663 F A +EVGS + P E +L AW+ ++F VDPFD CCR+ T+D F+ + Sbjct: 138 FADAVLEVGSFLAPGDEAPEAFLAAWRGPAAGLEFLVDPFDACCRLIFTRDTAFAFPGYR 197 Query: 664 NDTVILCEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFAL 843 V+ C+ K+EF V D+ +V+V R L + L P +YYRTADDDIHV+VPF L Sbjct: 198 EVPVMGCDVKLEFSVG-DVAAVRVY--RNDCSLLLRLTAAPRVYYRTADDDIHVSVPFDL 254 Query: 844 LDDDDPWIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLL 993 LDDDDPWIRT D T + A GRC YR+ ++PR M++A Y +L Sbjct: 255 LDDDDPWIRTTDITMSGAIGRCGMYRIKVAPRKWIMMDRALAYMKGQRVL 304 >ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1198 Score = 233 bits (594), Expect = 9e-59 Identities = 132/290 (45%), Positives = 170/290 (58%), Gaps = 7/290 (2%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFIVHNP-- 333 TQ+S+GGF VTAKDL +YLE+ IG V RCRLKTS TPP SYP F I+ I Sbjct: 13 TQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEITDITKITRTEDY 72 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 RV PH FV F P + + A R L N LK G E ++ QRRR PF+ Sbjct: 73 RRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKTTPFKL 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVIL 681 + +E+G+LV+ +E+ V W+ VDF VDPFD CR +++ FS + VI Sbjct: 133 SGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAEHAVIK 192 Query: 682 CEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDP 861 C+FK+EF V RDI +K E +VL ++L P ++YRTADDDI V+VPF LLDDDDP Sbjct: 193 CDFKVEFLV-RDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVSVPFDLLDDDDP 251 Query: 862 WIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLLGETVER 1011 WIRT DFT + A GRC YRVS+ PR G + +A + + E + R Sbjct: 252 WIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRR 301 >ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] Length = 1197 Score = 228 bits (581), Expect = 3e-57 Identities = 130/286 (45%), Positives = 169/286 (59%), Gaps = 5/286 (1%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFI--VHNP 333 TQ+SIGGFG TAK L DYLE +G V RCRLKTS TPP SYP F I+ T+ I + Sbjct: 13 TQVSIGGFGESTTAKQLTDYLEDELGLVWRCRLKTSWTPPGSYPNFEIADTSSIPKFDDY 72 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 +V PH FV F P + + A + L +G LKV G + Y+ QRRR P++ Sbjct: 73 KKVEPHAFVHFAVPESAARAMDAAGQCNLILDGQPLKVSLGPKNPYTLNQRRRTTTPYKL 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQ-DIVDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVILCE 687 +E+G+LV+ +E+LV+W+ D VDF VDPFD+ C+ K FS +D VI C+ Sbjct: 133 AGISLEIGTLVSRDEFLVSWRADGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCD 192 Query: 688 FKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDPWI 867 +K+E V RDI++V+ VL ++L P ++YRTADDDIH T+P LLDDDDPWI Sbjct: 193 YKLELLV-RDIQTVRQYKNSHGYVLILQLASSPRVWYRTADDDIHDTIPVDLLDDDDPWI 251 Query: 868 RTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLLGETV 1005 RT DFT A GRC YRV +SPR + A Y + E V Sbjct: 252 RTTDFTQVGAIGRCHSYRVLISPRYEKKLTTALEYLRMRRVQEERV 297 >gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis] Length = 1194 Score = 228 bits (580), Expect = 4e-57 Identities = 132/277 (47%), Positives = 166/277 (59%), Gaps = 7/277 (2%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF--ISSTNFIVHNPA 336 TQISIGGF V AKDL D+LE +G V RCRLKTS T SYP F I+S N + Sbjct: 13 TQISIGGFDRHVKAKDLMDFLEYEVGIVYRCRLKTSCTARESYPTFENINSENIMESIDI 72 Query: 337 R-VLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSETYSRF-QRRRNINPFRF 510 R V PH FV F +P +V T+ L N TLKV G ET R QRRR P + Sbjct: 73 RQVEPHAFVHFASPESVNWTLS----NPLMLNNQTLKVTLGPETLYRMNQRRRTTTPIKL 128 Query: 511 TKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVIL 681 +E+G+LV +E+ VAW+ VDF VDPFD C+ T+D FS +D ++ Sbjct: 129 ADVIVEIGNLVRRDEFFVAWRGPSYGVDFLVDPFDGLCKFCFTRDTAFSFKDMAKLAMMK 188 Query: 682 CEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDP 861 C+FK+EF V RDI +K + +V+ + L P ++YRTADDDI V+VPF LLDDDDP Sbjct: 189 CDFKVEFLV-RDINEIKQYTDTSHLVVLLLLASSPRVWYRTADDDIEVSVPFDLLDDDDP 247 Query: 862 WIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 WIRT DFT + A GRC YRVS+ PR G +++A Y Sbjct: 248 WIRTTDFTPSGAIGRCNSYRVSIPPRHGSKLKKAMSY 284 >ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus] gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase 6 [Cucumis sativus] Length = 1197 Score = 227 bits (579), Expect = 5e-57 Identities = 125/281 (44%), Positives = 168/281 (59%), Gaps = 7/281 (2%) Frame = +1 Query: 151 KMESTQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFIVH 327 K+ TQ+S GGF V A+DL YLE IG V RCRLKTS TPP SYP F +S+ ++ Sbjct: 8 KIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVIK 67 Query: 328 NP--ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNIN 498 + +V+PH FV F++P + E + A RG L FN LK G E+ + QRRR Sbjct: 68 SDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTKV 127 Query: 499 PFRFTKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKND 669 PF+ + ++++G+L + + VAW+ +DF VDPFD C+ TKD FS +D Sbjct: 128 PFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKH 187 Query: 670 TVILCEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLD 849 T + C++KMEF V RDI + + V+ ++L P I+YRTADDDI VP+ LLD Sbjct: 188 TFLKCDYKMEFIV-RDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD 246 Query: 850 DDDPWIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 DDDPWIRT DFT + A GRC +RVS+ PR G + A Y Sbjct: 247 DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNY 287 >gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao] Length = 1197 Score = 227 bits (578), Expect = 7e-57 Identities = 123/277 (44%), Positives = 164/277 (59%), Gaps = 7/277 (2%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKFISSTNFIVHNP--- 333 TQ+S+GGFG V AKDL +Y + +G V RCRLKTS TPP SYP F + ++ Sbjct: 13 TQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEILDSTVIQRTDDY 72 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 +V PH FV F +P V A R L FN LKV G E Y +RRRN PF+ Sbjct: 73 KKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYLNRRRRNTTPFKL 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVIL 681 + +++G +V+ +E+ V W+ VDF VDPFD C+ ++D FS + VI Sbjct: 133 SDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAFSFKGTTEYAVIK 192 Query: 682 CEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDP 861 C+FK+EF V RDI +K E +V+F++L P ++YRTADD+I +VPF LLDDDD Sbjct: 193 CDFKVEFLV-RDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEESVPFDLLDDDDQ 251 Query: 862 WIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 WIRT DFT + A GRC YRV + PR G +++A Y Sbjct: 252 WIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDY 288 >ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus] Length = 1197 Score = 227 bits (578), Expect = 7e-57 Identities = 125/281 (44%), Positives = 168/281 (59%), Gaps = 7/281 (2%) Frame = +1 Query: 151 KMESTQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFIVH 327 K+ TQ+S GGF V A+DL YLE IG V RCRLKTS TPP SYP F +S+ ++ Sbjct: 8 KIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVIK 67 Query: 328 NP--ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNIN 498 + +V+PH FV F++P + E + A RG L FN LK G E+ + QRRR Sbjct: 68 SDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTKV 127 Query: 499 PFRFTKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKND 669 PF+ + ++++G+L + + VAW+ +DF VDPFD C+ TKD FS +D Sbjct: 128 PFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKH 187 Query: 670 TVILCEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLD 849 T + C++KMEF V RDI + + V+ ++L P I+YRTADDDI VP+ LLD Sbjct: 188 TFLKCDYKMEFIV-RDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLVPYDLLD 246 Query: 850 DDDPWIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 DDDPWIRT DFT + A GRC +RVS+ PR G + A Y Sbjct: 247 DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNY 287 >ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella] gi|482559225|gb|EOA23416.1| hypothetical protein CARUB_v10016597mg [Capsella rubella] Length = 1197 Score = 226 bits (577), Expect = 9e-57 Identities = 128/286 (44%), Positives = 171/286 (59%), Gaps = 5/286 (1%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFI--VHNP 333 TQ+SIGGFG TAK L DYLE +G V RCRLK S TPP SYP F I+ T+ I + + Sbjct: 13 TQVSIGGFGESTTAKQLTDYLEDEVGLVWRCRLKNSWTPPGSYPNFEIADTSNIPRIDDY 72 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 +V PH FV F + + A + L +G LKV G + Y+ QRRR P++ Sbjct: 73 KKVEPHAFVHFALSESTNHAMDAAGQCKLILDGQPLKVSLGPKNPYTLNQRRRTTTPYKM 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQ-DIVDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVILCE 687 T +E+G+LV+ +E+LV+W+ D V+F VDPFD+ C+ +K F+ +D VI C+ Sbjct: 133 TGVSLEIGTLVSRDEFLVSWRADGVNFLVDPFDNTCKFCFSKSTAFAFKDAVMHAVIKCD 192 Query: 688 FKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDPWI 867 +K+E V RDI++ + VL ++L P ++YRTADDDI+ TVPF LLDDDDPWI Sbjct: 193 YKLESLV-RDIQTFRQYRNSHGFVLLLQLASSPRVWYRTADDDIYETVPFDLLDDDDPWI 251 Query: 868 RTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFSRYHLLGETV 1005 RT DFT A GRCL YRV +SPR + A Y + E V Sbjct: 252 RTTDFTQVGAIGRCLSYRVLISPRYDKKLTTALDYLRMRRVQEERV 297 >ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1200 Score = 226 bits (576), Expect = 1e-56 Identities = 126/277 (45%), Positives = 166/277 (59%), Gaps = 7/277 (2%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFI--VHNP 333 TQ+S+GGF VTAKDL +YL++ IG V RCRLKTS TPP SYP F I+ I + Sbjct: 13 TQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDITKIERTEDY 72 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 RV+PH FV F P + + + R L N LKV G + ++ QRRR PF+ Sbjct: 73 RRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRTTTPFKL 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVIL 681 + E+G+LV+ +E+ V W+ VDF VDPFD C+ +++ FS + VI Sbjct: 133 SDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTSEHAVIK 192 Query: 682 CEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDP 861 C+FK+EF V RDI + E +VL ++L P ++YRTADDDI VPF LLDDDDP Sbjct: 193 CDFKVEFLV-RDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLLDDDDP 251 Query: 862 WIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 WIRT DFT + A GRC YRVS+ PR G + +A +Y Sbjct: 252 WIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKY 288 >gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus] Length = 1201 Score = 226 bits (575), Expect = 1e-56 Identities = 126/279 (45%), Positives = 168/279 (60%), Gaps = 7/279 (2%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKFISSTNFIVHNP--- 333 TQ+SIGGF V A DLA++LE IG V RCRLKTS TPP SYP+F + +V Sbjct: 13 TQVSIGGFDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVADTALVKRTDDY 72 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 +V PH FV F P +V E + + L + G LKV G + Y QRRR PF+ Sbjct: 73 KKVEPHAFVHFALPESVTEALDASGSCDLMWEGKPLKVISGPQNPYFLNQRRRKETPFKL 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVIL 681 + +E+G+LV+PEE++VAW+ V+ VDPFD CR+ ++D FS + + VI Sbjct: 133 SDVLVEIGTLVSPEEFVVAWRGPEKGVNLLVDPFDRMCRLRFSRDTAFSIKQNEKKAVIK 192 Query: 682 CEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDP 861 C+FK+EF V RDI V+ + V+ + L P ++YRTADDDI +V F LLDDDDP Sbjct: 193 CDFKVEFMV-RDIYEVRRYDDTSYRVVLLHLASSPLVWYRTADDDIEESVSFDLLDDDDP 251 Query: 862 WIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRYFS 978 WIRT DFT + A GRC YR+S+ PR G + +A Y + Sbjct: 252 WIRTTDFTPSGAIGRCNFYRISIPPRHGAKLMKAMAYLN 290 >gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica] Length = 1196 Score = 225 bits (574), Expect = 2e-56 Identities = 127/276 (46%), Positives = 162/276 (58%), Gaps = 6/276 (2%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKFISSTNFIVHNP--A 336 TQ+S GGF AKDL YLE IG V RCRLKTS TPP S+P F +T + + Sbjct: 13 TQVSFGGFQHHARAKDLVTYLEDEIGLVYRCRLKTSWTPPESFPNFEINTADVKRTDDYS 72 Query: 337 RVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRFT 513 RV PH FV F++P +V + A R L FN LKV G E Y +RRR PF+ + Sbjct: 73 RVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYFLNRRRRTKTPFKLS 132 Query: 514 KAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVILC 684 +E+GSLV +E+ +W+ VDF VDPFD C+ T D FS + K VI C Sbjct: 133 DVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMDTAFSFKGTKKHAVIKC 192 Query: 685 EFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDPW 864 +FK+EF V R+I +K + +V+ + L P + YRTADDDI +VPF LLDDDDPW Sbjct: 193 DFKVEFLV-REIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSVPFDLLDDDDPW 251 Query: 865 IRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 IRT DFT + A GRC YRV + PR G +++A Y Sbjct: 252 IRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNY 287 >ref|XP_002457941.1| hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor] gi|241929916|gb|EES03061.1| hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor] Length = 1207 Score = 225 bits (574), Expect = 2e-56 Identities = 124/278 (44%), Positives = 163/278 (58%), Gaps = 7/278 (2%) Frame = +1 Query: 160 STQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKFI--SSTNFIVHNP 333 +TQ+S+GGF V A DLAD+LE G V RCR+KTS TPP +YP F+ + T+ P Sbjct: 21 TTQVSLGGFDATVKALDLADFLELKAGLVWRCRVKTSWTPPDAYPDFLLPTVTSAAAQPP 80 Query: 334 A--RVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSETYSRFQRRRNINPFR 507 RV PH FV F P + A R L +G L+ E+ R RRR+++PFR Sbjct: 81 QYDRVPPHAFVHFARPEGARAAADAAGRSELILSGKPLRAASAQESSLRASRRRSVSPFR 140 Query: 508 FTKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVI 678 F +++EVG L + +L AW+ ++F VDPFD CR+ +D F R+ + V+ Sbjct: 141 FPGSRLEVGDLPAKDAFLAAWRGPASGLEFSVDPFDGSCRLIFARDTAFKVREFRESVVM 200 Query: 679 LCEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDD 858 C+ K+EF V RD+ V+V R L I L P +YYRTADDDIH +VPF LLDDDD Sbjct: 201 RCDVKLEFPV-RDVAEVRVF--RLDCSLLIRLSAAPLVYYRTADDDIHESVPFDLLDDDD 257 Query: 859 PWIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 PWIRT D T + A GRC YR++ SPR ME+A Y Sbjct: 258 PWIRTTDITPSGAIGRCGAYRITFSPRFWPKMERALAY 295 >gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum] gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum] Length = 1196 Score = 225 bits (573), Expect = 2e-56 Identities = 128/277 (46%), Positives = 165/277 (59%), Gaps = 7/277 (2%) Frame = +1 Query: 163 TQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKF-ISSTNFIVH--NP 333 TQ+S+GGF V A+DL YLE +G V RCRLKTS TPP SYP F I+ T I N Sbjct: 13 TQVSVGGFDRHVKARDLMKYLENEVGLVWRCRLKTSWTPPESYPNFEITDTTVIQRKDNY 72 Query: 334 ARVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSET-YSRFQRRRNINPFRF 510 +V PH FV F +P AV V A R L+FN LKV G E Y +RRR+ PF+ Sbjct: 73 KKVEPHAFVHFASPQAVTWAVDAAGRTELAFNNQLLKVSLGPENPYYLNRRRRDTTPFKL 132 Query: 511 TKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVIL 681 +E+G+L + +E++V W+ V+F VDPFD C+ ++D FS + VI Sbjct: 133 PDVSLEIGTLASCDEFIVGWRGPPSGVEFLVDPFDCTCKFCFSRDTAFSFKGTNEHAVIK 192 Query: 682 CEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDDP 861 C+FK+EF V R+I VK E V+ ++L P ++YRTADDD TVPF LLDDDD Sbjct: 193 CDFKVEFLV-REINEVKQYSEPTGFVVLLQLASSPWVWYRTADDDFEKTVPFGLLDDDDQ 251 Query: 862 WIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 WIRT DFT + A GRC YRV + PR G +++A Y Sbjct: 252 WIRTTDFTASGAIGRCNTYRVLVRPRHGLKLKKAMDY 288 >tpg|DAA54873.1| TPA: hypothetical protein ZEAMMB73_768916 [Zea mays] Length = 937 Score = 223 bits (569), Expect = 7e-56 Identities = 122/278 (43%), Positives = 161/278 (57%), Gaps = 7/278 (2%) Frame = +1 Query: 160 STQISIGGFGGGVTAKDLADYLEKNIGTVARCRLKTSITPPFSYPKFISSTNFIVHNPA- 336 +TQ+S+GGF V A DLAD+LE N G+V RCRLKTS TPP +YP F+ T P Sbjct: 21 TTQVSLGGFDATVKALDLADFLELNAGSVWRCRLKTSWTPPDAYPDFLLPTVTSAAAPPP 80 Query: 337 ---RVLPHGFVQFLAPAAVKETVKMAKRGMLSFNGGTLKVHEGSETYSRFQRRRNINPFR 507 RV PH FV F P + A R L +G L+ ++ R RRR+++PFR Sbjct: 81 QYDRVPPHAFVHFARPEGARAAADAAGRSELILSGKPLRAASAQDSSLRASRRRSVSPFR 140 Query: 508 FTKAKIEVGSLVTPEEYLVAWQDI---VDFHVDPFDDCCRIFLTKDQLFSTRDKKNDTVI 678 F +++EVG L + ++ AW+ ++F VDPFD C +D F R+ + V+ Sbjct: 141 FPGSRLEVGDLPASDAFIAAWRGPASGLEFSVDPFDGSCHFIFARDTAFKVREFRESVVM 200 Query: 679 LCEFKMEFRVKRDIKSVKVSMERGTIVLFIELLCPPSIYYRTADDDIHVTVPFALLDDDD 858 C+ K++F V RD+ V+V R L I L P + YRTADDDIHV+VPF LLDDDD Sbjct: 201 RCDVKLQFPV-RDVAEVRVF--RLDCSLLIRLSAAPLVCYRTADDDIHVSVPFDLLDDDD 257 Query: 859 PWIRTLDFTDNNAFGRCLCYRVSLSPRTGHTMEQAKRY 972 PWIRT D T + A GRC YR++ SPR ME+A Y Sbjct: 258 PWIRTTDITPSGAIGRCGAYRITFSPRFWPKMERALTY 295