BLASTX nr result
ID: Ephedra26_contig00016299
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00016299
(746 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group] g... 159 1e-36
ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like... 154 3e-35
ref|XP_006440160.1| hypothetical protein CICLE_v10024418mg [Citr... 153 7e-35
gb|EOY24163.1| Restriction endonuclease, type II-like superfamil... 149 7e-34
ref|XP_006649219.1| PREDICTED: DNA repair endonuclease UVH1-like... 149 1e-33
ref|XP_006477073.1| PREDICTED: DNA repair endonuclease UVH1-like... 147 4e-33
ref|XP_004986081.1| PREDICTED: DNA repair endonuclease UVH1-like... 147 4e-33
ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like... 147 4e-33
emb|CBI25868.3| unnamed protein product [Vitis vinifera] 147 4e-33
gb|AFW66582.1| hypothetical protein ZEAMMB73_828091 [Zea mays] 145 1e-32
dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare] 145 1e-32
ref|XP_002466046.1| hypothetical protein SORBIDRAFT_01g050650 [S... 144 3e-32
ref|XP_002868610.1| hypothetical protein ARALYDRAFT_493859 [Arab... 142 9e-32
gb|EXC26778.1| DNA repair endonuclease UVH1 [Morus notabilis] 141 2e-31
ref|XP_006282540.1| hypothetical protein CARUB_v10004080mg [Caps... 141 3e-31
gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis tha... 139 1e-30
ref|NP_001031991.1| DNA repair endonuclease UVH1 [Arabidopsis th... 139 1e-30
ref|NP_198931.1| DNA repair endonuclease UVH1 [Arabidopsis thali... 139 1e-30
gb|ABQ52659.1| ultraviolet hypersensitive 1 [Arabidopsis thaliana] 139 1e-30
ref|XP_004511740.1| PREDICTED: DNA repair endonuclease UVH1-like... 137 5e-30
>ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group]
gi|108705675|gb|ABF93470.1| ERCC4 domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113547116|dbj|BAF10559.1| Os03g0100400 [Oryza sativa
Japonica Group] gi|215696969|dbj|BAG90963.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215768474|dbj|BAH00703.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222624006|gb|EEE58138.1| hypothetical protein
OsJ_09049 [Oryza sativa Japonica Group]
Length = 995
Score = 159 bits (401), Expect = 1e-36
Identities = 91/213 (42%), Positives = 121/213 (56%), Gaps = 8/213 (3%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSNIRKDTXX 565
YLKYLD LRVSEG+ +VWIFA+ SHKIFD SK+RVY+V+++DG V + N K
Sbjct: 301 YLKYLDTLRVSEGVRSVWIFADSSHKIFDLSKRRVYQVVRADGTKVAADNKGTPTKKRKV 360
Query: 564 XXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEV------VGEEMPKWTXXXXXXXXXXX 403
D++++T K+ E+ + EE PKW
Sbjct: 361 ARASSRKGKETENEGSS----DNKDNTQKVNAEMGIVVEEILEEAPKWKVLRELLQEIAE 416
Query: 402 XRQKAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLL 223
+ K N N + ED ++ G VLVACKDER+CVQLQ+CI KG+ ++M EWE+YLL
Sbjct: 417 EQAKGDGDNVNP-VHEDGINESG-IVLVACKDERSCVQLQECISKGSHQVMRAEWEKYLL 474
Query: 222 GKTELHGIQTTRKKKTS--KGYGILDGRFPGRS 130
GK ELHG+ KK + KG+G+LDG P RS
Sbjct: 475 GKAELHGLHRKNKKTSQQLKGFGVLDGEVPMRS 507
>ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like [Brachypodium
distachyon]
Length = 991
Score = 154 bits (389), Expect = 3e-35
Identities = 84/206 (40%), Positives = 115/206 (55%), Gaps = 4/206 (1%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSNIRKDTXX 565
YLKYLD LRVSEG+ +VWI A+ SHKIF+ +K+RVY+V++ DG V + N K
Sbjct: 305 YLKYLDTLRVSEGVRSVWILADSSHKIFELAKRRVYQVVRPDGTKVSTSNKGTPTKKRKA 364
Query: 564 XXXXXXXXXXXXXXXXXXXSCDSENSTSKIE--LEVVGEEMPKWTXXXXXXXXXXXXRQK 391
D++N +++ LE V EE PKW +
Sbjct: 365 THSSSKKGKETENEDSAPNKDDAQNVNAEVSILLEEVLEEAPKWKVLRALLQ------EI 418
Query: 390 AKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTE 211
A+ + + + G VL+ACKDER+C+QLQDCI K K+M EEWE+YLLGK E
Sbjct: 419 AEEQRKGDGAVPEVESNESGIVLLACKDERSCLQLQDCISKSPHKVMREEWEKYLLGKAE 478
Query: 210 LHGIQTTRKKKTS--KGYGILDGRFP 139
LHG+ RK+++ KG+G+LDG FP
Sbjct: 479 LHGLHKKRKRQSQQPKGFGVLDGEFP 504
>ref|XP_006440160.1| hypothetical protein CICLE_v10024418mg [Citrus clementina]
gi|557542422|gb|ESR53400.1| hypothetical protein
CICLE_v10024418mg [Citrus clementina]
Length = 1220
Score = 153 bits (386), Expect = 7e-35
Identities = 91/212 (42%), Positives = 120/212 (56%), Gaps = 10/212 (4%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNV------VSGNMSNI 583
YLKYLD LRVSE +VWIFA S+KIFD++KKRVY+ +SDG + V+G +
Sbjct: 514 YLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKL 573
Query: 582 RK-DTXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXX 406
+K D + ++++K+ LE V EE PKW
Sbjct: 574 KKVDNNEDEGECCPVVCFVLVYVFLTDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIE 633
Query: 405 XXRQKAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYL 226
R K LS E + D ++ G VLVACKDE +C+QL+DCI G++K+M EEWE+YL
Sbjct: 634 EERLKQALSREEVLL--DGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 691
Query: 225 LGKTELHGIQTTRKKKTS---KGYGILDGRFP 139
L K +L G+QT+ KKK S KGYGILDG P
Sbjct: 692 LSKVQLRGVQTSSKKKKSKEPKGYGILDGVAP 723
>gb|EOY24163.1| Restriction endonuclease, type II-like superfamily protein
[Theobroma cacao]
Length = 976
Score = 149 bits (377), Expect = 7e-34
Identities = 90/213 (42%), Positives = 114/213 (53%), Gaps = 11/213 (5%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNV------VSGNMSNI 583
YLKYLD LRVSE +VWIFA S+KIFD+++KRVY +SDG + VSG +
Sbjct: 293 YLKYLDTLRVSESFRSVWIFAESSYKIFDYARKRVYCFSRSDGTKINKPSKNVSGKKRKL 352
Query: 582 RKDTXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXX 403
++D S +++ + LE V EE PKW
Sbjct: 353 KED-------------GSINEGAIAGTSSTGTSNGVVLEEVLEEPPKWKVLREVLEEIEE 399
Query: 402 XRQKAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLL 223
RQK S E + D +D G VLV CKDER+C+QL+DCI QK+M +EWE+YLL
Sbjct: 400 ERQKQASSEE---LLLDVGEDNNGIVLVVCKDERSCMQLEDCITNSPQKVMRDEWEKYLL 456
Query: 222 GKTELHGIQTTRKK-----KTSKGYGILDGRFP 139
K EL +QT+ KK KT KGYGILDG P
Sbjct: 457 SKVELRSVQTSHKKKPKKPKTPKGYGILDGIVP 489
>ref|XP_006649219.1| PREDICTED: DNA repair endonuclease UVH1-like [Oryza brachyantha]
Length = 987
Score = 149 bits (376), Expect = 1e-33
Identities = 84/210 (40%), Positives = 122/210 (58%), Gaps = 5/210 (2%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSNIRKDTXX 565
YLKYLD LRVSEG+ +VWIFA+ SHKIFD SK+RVY+V+++DG V + + K
Sbjct: 296 YLKYLDTLRVSEGVRSVWIFADSSHKIFDLSKRRVYQVVRADGTKVAADSKGTPTKKRKV 355
Query: 564 XXXXXXXXXXXXXXXXXXXSCDSE--NSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQK 391
+++ ++ + + +E + EE PKW ++
Sbjct: 356 AHSSSRKGKETENEDSNDNKDNAQKVHAETGVVVEEILEESPKWKVLRELLQEIAE--EQ 413
Query: 390 AKLSNENQS-ISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKT 214
AK +N + + ED ++ G VL+ACKDER+C+QLQ+C+ KG ++M EWE+YLLGK
Sbjct: 414 AKGDGDNVTPVHEDRLNESG-IVLIACKDERSCLQLQECMSKGLHQVMRVEWEKYLLGKA 472
Query: 213 ELHGIQTTRKKKTS--KGYGILDGRFPGRS 130
ELHG+ KK + KG+G+LDG P RS
Sbjct: 473 ELHGLHRKNKKTSQQPKGFGVLDGEVPMRS 502
>ref|XP_006477073.1| PREDICTED: DNA repair endonuclease UVH1-like [Citrus sinensis]
Length = 982
Score = 147 bits (371), Expect = 4e-33
Identities = 85/211 (40%), Positives = 119/211 (56%), Gaps = 9/211 (4%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNV------VSGNMSNI 583
YLKYLD LRVSE +VWIFA S+KIFD++KKRVY+ +SDG + V+G +
Sbjct: 293 YLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKL 352
Query: 582 RKDTXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXX 403
+K + ++++K+ LE V EE PKW
Sbjct: 353 KKVDNNEDEDGG----------------TSSTSTKVVLEEVLEEAPKWKVLREVLEEIEE 396
Query: 402 XRQKAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLL 223
++ K ++ + + D ++ G VLVACKDE +C+QL+DCI G++K+M EEWE+YLL
Sbjct: 397 --ERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLL 454
Query: 222 GKTELHGIQTTRKKKTS---KGYGILDGRFP 139
K +L +QT+ KKK S KGYGILDG P
Sbjct: 455 SKVQLRSVQTSSKKKKSKEPKGYGILDGVAP 485
>ref|XP_004986081.1| PREDICTED: DNA repair endonuclease UVH1-like [Setaria italica]
Length = 1027
Score = 147 bits (371), Expect = 4e-33
Identities = 85/203 (41%), Positives = 112/203 (55%), Gaps = 4/203 (1%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSNIRKDTXX 565
YLKYLD LRVSEG+ +VWI A+ SHKIF+ +K+RVY+V+++DG V + K
Sbjct: 334 YLKYLDTLRVSEGVRSVWILADSSHKIFELAKRRVYQVVRADGIKVSTDKKGTPTKKRKV 393
Query: 564 XXXXXXXXXXXXXXXXXXXSCDSE--NSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQK 391
+++ N+ + I L+ V EE PKW ++
Sbjct: 394 AHNSTDKGKEYENEDSTADKHNTQKVNADAGIVLDEVLEEAPKWKVLQELLQEIAE--EQ 451
Query: 390 AKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTE 211
K EN +D G VLV CKDER C QLQ+CI KG K+M EEWE+YLLGK E
Sbjct: 452 TKGDGENAQA-----EDESGIVLVTCKDERTCFQLQECISKGPHKVMQEEWEKYLLGKAE 506
Query: 210 LHGIQTTRKKKTS--KGYGILDG 148
LHG+Q KKK+ KG+G+LDG
Sbjct: 507 LHGLQKKNKKKSEQPKGFGVLDG 529
>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
Length = 964
Score = 147 bits (371), Expect = 4e-33
Identities = 87/207 (42%), Positives = 111/207 (53%), Gaps = 2/207 (0%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSNIRKDTXX 565
YLKYLD+LR SE I +VWIFA S+KIF+++KKRVY ++SDGG + N S K
Sbjct: 295 YLKYLDSLRASENIRSVWIFAESSYKIFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKL 354
Query: 564 XXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQKAK 385
+ + LE V EE PKW R++
Sbjct: 355 NNNKNEANGDSVLV----------GTNGGVVLEEVLEESPKWKVLREVLKEIEEEREQQA 404
Query: 384 LSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTELH 205
S E+ S D +D G VLVACKDER+C+QL+D I QK+M EEWE+YLL K EL
Sbjct: 405 SSREDASAEGD--EDDSGIVLVACKDERSCMQLEDFIKSDPQKVMREEWEKYLLSKVELQ 462
Query: 204 GIQTTRKKKTS--KGYGILDGRFPGRS 130
G+QT +K K KG+GIL+G P S
Sbjct: 463 GLQTRKKNKAKEPKGFGILNGEVPSTS 489
>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
Length = 1195
Score = 147 bits (371), Expect = 4e-33
Identities = 87/207 (42%), Positives = 111/207 (53%), Gaps = 2/207 (0%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSNIRKDTXX 565
YLKYLD+LR SE I +VWIFA S+KIF+++KKRVY ++SDGG + N S K
Sbjct: 529 YLKYLDSLRASENIRSVWIFAESSYKIFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKL 588
Query: 564 XXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQKAK 385
+ + LE V EE PKW R++
Sbjct: 589 NNNKNEANGDSVLV----------GTNGGVVLEEVLEESPKWKVLREVLKEIEEEREQQA 638
Query: 384 LSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTELH 205
S E+ S D +D G VLVACKDER+C+QL+D I QK+M EEWE+YLL K EL
Sbjct: 639 SSREDASAEGD--EDDSGIVLVACKDERSCMQLEDFIKSDPQKVMREEWEKYLLSKVELQ 696
Query: 204 GIQTTRKKKTS--KGYGILDGRFPGRS 130
G+QT +K K KG+GIL+G P S
Sbjct: 697 GLQTRKKNKAKEPKGFGILNGEVPSTS 723
>gb|AFW66582.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
Length = 986
Score = 145 bits (367), Expect = 1e-32
Identities = 82/201 (40%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSN-IRKDTX 568
YLKYLD LRVSEG+ +VWI A+ SH+IF+ +K+RVY+ +++DG NV N +K
Sbjct: 295 YLKYLDTLRVSEGVRSVWILADSSHRIFELAKRRVYQAVRTDGVNVSIDNKGTPTKKRKV 354
Query: 567 XXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQKA 388
+ N+ I LE V EE PKW R K+
Sbjct: 355 AHNSTKKGKVTENEDSTVGPNTQKANTDVGIVLEEVLEEAPKWKVLWELLQEIAEQRMKS 414
Query: 387 KLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTEL 208
N + ++ +D G VLV+CKDER C+QLQ+CI KG ++M EEWE+YL+GK EL
Sbjct: 415 SAGN----VHDEDKNDESGIVLVSCKDERTCLQLQECILKGPCQVMREEWEKYLIGKAEL 470
Query: 207 HGI-QTTRKKKTSKGYGILDG 148
HG+ + RK + KG G+LDG
Sbjct: 471 HGLNKDKRKSEQPKGVGVLDG 491
>dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 998
Score = 145 bits (366), Expect = 1e-32
Identities = 83/214 (38%), Positives = 118/214 (55%), Gaps = 4/214 (1%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNV--VSGNMSNIRKDT 571
YLKYLD LRVSEG+ +VW+ A SHKIF+ +K+RVY+V++ DG V G + RK T
Sbjct: 309 YLKYLDTLRVSEGVRSVWMLAESSHKIFELAKRRVYQVVRPDGTRVSIAKGTPTKKRKVT 368
Query: 570 XXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQK 391
N+ + LE V EE PKW +
Sbjct: 369 PSRSKKGKETENEDSASNKDD-AQKVNAEASFLLEEVLEEAPKWKVLRELLQ------EI 421
Query: 390 AKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTE 211
A+ + ++ + ++ G VLVACKDER+C+QLQ+CI + ++M EEWE+YLLGK E
Sbjct: 422 AEEQRKGDAVVHEDENNECGIVLVACKDERSCLQLQECILRSPHQVMREEWEKYLLGKAE 481
Query: 210 LHGIQTTRKKKTS--KGYGILDGRFPGRSKAHSN 115
L G+ +KK++ KG+G+LDG+FP S + N
Sbjct: 482 LFGLHKKKKKRSQQPKGFGVLDGQFPTGSNENEN 515
>ref|XP_002466046.1| hypothetical protein SORBIDRAFT_01g050650 [Sorghum bicolor]
gi|241919900|gb|EER93044.1| hypothetical protein
SORBIDRAFT_01g050650 [Sorghum bicolor]
Length = 1032
Score = 144 bits (363), Expect = 3e-32
Identities = 81/203 (39%), Positives = 110/203 (54%), Gaps = 4/203 (1%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSNIRKDTXX 565
YLKYLD LRVSEG+ +VWI A+ SHKIF+ +K+RVY+ +++DG V N K
Sbjct: 335 YLKYLDTLRVSEGVRSVWILADSSHKIFELAKRRVYQAVRTDGAKVSMDNKGTPTKKRKV 394
Query: 564 XXXXXXXXXXXXXXXXXXXSCDSE--NSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQK 391
+++ N+ I LE V EE PKW + K
Sbjct: 395 AHNTTKKGKETENEDSTVGRDNTQKVNTDVGIVLEEVLEEAPKWKVLWELLQEIAEEQMK 454
Query: 390 AKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTE 211
+ N + ++ D G VLV CKDER C+QLQ+CI KG ++M EEWE+YL+GK E
Sbjct: 455 SDAGN----VHDEDKSDEHGIVLVTCKDERTCLQLQECILKGPCQVMREEWEKYLIGKAE 510
Query: 210 LHGIQTTRKKKTS--KGYGILDG 148
LHG+ K+K+ KG G+LDG
Sbjct: 511 LHGLNKKNKRKSEQPKGVGVLDG 533
>ref|XP_002868610.1| hypothetical protein ARALYDRAFT_493859 [Arabidopsis lyrata subsp.
lyrata] gi|297314446|gb|EFH44869.1| hypothetical protein
ARALYDRAFT_493859 [Arabidopsis lyrata subsp. lyrata]
Length = 956
Score = 142 bits (359), Expect = 9e-32
Identities = 84/207 (40%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSD---GGNVVSGNMSNIRKD 574
+LK+LD LRVSE +VW+FA S+KIFDF+KKRVY+++K+ +V RK
Sbjct: 295 FLKFLDTLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKELVKNKSGKKRKS 354
Query: 573 TXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQ 394
+ N + + +E V EE PKW +
Sbjct: 355 KGENDSVEAVGGET-----------ATNVATGVVVEEVLEEAPKWKVLREIL-------E 396
Query: 393 KAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKT 214
+ + + Q+ SE+ D G VLVACKDER+C+QL+DCI QK+M EEWE YLL KT
Sbjct: 397 ETQEERKKQAFSEEDNSDNNGIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLLSKT 456
Query: 213 ELHGIQTTRKK--KTSKGYGILDGRFP 139
EL +QT +KK KT KG+GILDG P
Sbjct: 457 ELRSMQTPQKKKQKTPKGFGILDGVVP 483
>gb|EXC26778.1| DNA repair endonuclease UVH1 [Morus notabilis]
Length = 772
Score = 141 bits (356), Expect = 2e-31
Identities = 86/204 (42%), Positives = 109/204 (53%), Gaps = 2/204 (0%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVVSGNMSNIRKDTXX 565
YLKYLD LRVSE +VWIFA S+KIF+++KKRVY+ +KSDG + N S+ +
Sbjct: 88 YLKYLDTLRVSESHRSVWIFAESSYKIFEYAKKRVYRFVKSDGTKLGDPNKSSTSRKRKL 147
Query: 564 XXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQKAK 385
S N+ I L+ V EE PKW RQK
Sbjct: 148 KGAADDSEEVGGS--------SSTNTNVTISLDEVLEEPPKWKVLREVLEEIEEERQKQG 199
Query: 384 LSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTELH 205
LS +D G VLVACKDER+C+QL++CI G +K+M +EWE YLL K +L
Sbjct: 200 LS-----------EDDCGIVLVACKDERSCMQLEECITAGPKKVMRDEWENYLLNKVQLR 248
Query: 204 GIQTTRKKKTS--KGYGILDGRFP 139
+QT KKK KG+GILDG P
Sbjct: 249 DLQTRFKKKPKEPKGFGILDGVIP 272
>ref|XP_006282540.1| hypothetical protein CARUB_v10004080mg [Capsella rubella]
gi|482551245|gb|EOA15438.1| hypothetical protein
CARUB_v10004080mg [Capsella rubella]
Length = 956
Score = 141 bits (355), Expect = 3e-31
Identities = 87/207 (42%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSD---GGNVVSGNMSNIRKD 574
+LK+LD LRVSE +VW+FA S+KIFDF+KKRVY+++K+ V+ RK
Sbjct: 295 FLKFLDTLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVTNKSGKKRKS 354
Query: 573 TXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQ 394
+ N S + +E V EE PKW RQ
Sbjct: 355 KGENDSVEAVGGEA-----------ATNMASGVFIEEVLEEAPKWKVLREILEETQEERQ 403
Query: 393 KAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKT 214
K S E+ S D G VLVACKDER+C+QL+DCI QK+M EEWE YLL K
Sbjct: 404 KQAYSEEDNS-------DNNGIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLLSKI 456
Query: 213 ELHGIQTTRKK--KTSKGYGILDGRFP 139
EL +QT +KK KT KG+GILDG P
Sbjct: 457 ELRSMQTPQKKKQKTPKGFGILDGVVP 483
>gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis thaliana]
Length = 956
Score = 139 bits (349), Expect = 1e-30
Identities = 84/210 (40%), Positives = 112/210 (53%), Gaps = 8/210 (3%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVV------SGNMSNI 583
+LK+LD LRVSE +VW+FA S+KIFDF+KKRVY+++K+ SG N
Sbjct: 295 FLKFLDTLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVKNKSGKKRNS 354
Query: 582 RKDTXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXX 403
+ +T + N + + +E V EE PKW
Sbjct: 355 KGETDSVEAVGGET--------------ATNVATGVVVEEVLEEAPKWKVLREIL----- 395
Query: 402 XRQKAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLL 223
++ + Q+ SE+ D G VLVACKDER+C+QL+DCI QK+M EEWE YLL
Sbjct: 396 --EETQEERLKQAFSEEDNSDNNGIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLL 453
Query: 222 GKTELHGIQTTRKK--KTSKGYGILDGRFP 139
K EL +QT +KK KT KG+GILDG P
Sbjct: 454 SKIELRSMQTPQKKKQKTPKGFGILDGVVP 483
>ref|NP_001031991.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
gi|332007265|gb|AED94648.1| DNA repair endonuclease UVH1
[Arabidopsis thaliana]
Length = 689
Score = 139 bits (349), Expect = 1e-30
Identities = 84/210 (40%), Positives = 112/210 (53%), Gaps = 8/210 (3%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVV------SGNMSNI 583
+LK+LD LRVSE +VW+FA S+KIFDF+KKRVY+++K+ SG N
Sbjct: 295 FLKFLDTLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVKNKSGKKRNS 354
Query: 582 RKDTXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXX 403
+ +T + N + + +E V EE PKW
Sbjct: 355 KGETDSVEAVGGET--------------ATNVATGVVVEEVLEEAPKWKVLREIL----- 395
Query: 402 XRQKAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLL 223
++ + Q+ SE+ D G VLVACKDER+C+QL+DCI QK+M EEWE YLL
Sbjct: 396 --EETQEERLKQAFSEEDNSDNNGIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLL 453
Query: 222 GKTELHGIQTTRKK--KTSKGYGILDGRFP 139
K EL +QT +KK KT KG+GILDG P
Sbjct: 454 SKIELRSMQTPQKKKQKTPKGFGILDGVVP 483
>ref|NP_198931.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
gi|55976770|sp|Q9LKI5.2|XPF_ARATH RecName: Full=DNA
repair endonuclease UVH1; AltName: Full=DNA excision
repair protein XP-F homolog; AltName: Full=Ultraviolet
hypersensitive 1; Short=AtRAD1
gi|6013183|gb|AAF01274.1|AF160500_1 repair endonuclease
[Arabidopsis thaliana]
gi|11995299|gb|AAG42948.1|AF089003_1 single stranded DNA
endonuclease RAD1 [Arabidopsis thaliana]
gi|9759161|dbj|BAB09717.1| repair endonuclease
[Arabidopsis thaliana] gi|22655254|gb|AAM98217.1| repair
endonuclease [Arabidopsis thaliana]
gi|87128657|gb|ABD23028.1| ultraviolet hypersensitive 1
[Arabidopsis thaliana] gi|332007264|gb|AED94647.1| DNA
repair endonuclease UVH1 [Arabidopsis thaliana]
Length = 956
Score = 139 bits (349), Expect = 1e-30
Identities = 84/210 (40%), Positives = 112/210 (53%), Gaps = 8/210 (3%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVV------SGNMSNI 583
+LK+LD LRVSE +VW+FA S+KIFDF+KKRVY+++K+ SG N
Sbjct: 295 FLKFLDTLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVKNKSGKKRNS 354
Query: 582 RKDTXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXX 403
+ +T + N + + +E V EE PKW
Sbjct: 355 KGETDSVEAVGGET--------------ATNVATGVVVEEVLEEAPKWKVLREIL----- 395
Query: 402 XRQKAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLL 223
++ + Q+ SE+ D G VLVACKDER+C+QL+DCI QK+M EEWE YLL
Sbjct: 396 --EETQEERLKQAFSEEDNSDNNGIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLL 453
Query: 222 GKTELHGIQTTRKK--KTSKGYGILDGRFP 139
K EL +QT +KK KT KG+GILDG P
Sbjct: 454 SKIELRSMQTPQKKKQKTPKGFGILDGVVP 483
>gb|ABQ52659.1| ultraviolet hypersensitive 1 [Arabidopsis thaliana]
Length = 935
Score = 139 bits (349), Expect = 1e-30
Identities = 84/210 (40%), Positives = 112/210 (53%), Gaps = 8/210 (3%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGGNVV------SGNMSNI 583
+LK+LD LRVSE +VW+FA S+KIFDF+KKRVY+++K+ SG N
Sbjct: 311 FLKFLDTLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVKNKSGKKRNS 370
Query: 582 RKDTXXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXX 403
+ +T + N + + +E V EE PKW
Sbjct: 371 KGETDSVEAVGGET--------------ATNVATGVVVEEVLEEAPKWKVLREIL----- 411
Query: 402 XRQKAKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLL 223
++ + Q+ SE+ D G VLVACKDER+C+QL+DCI QK+M EEWE YLL
Sbjct: 412 --EETQEERLKQAFSEEDNSDNNGIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLL 469
Query: 222 GKTELHGIQTTRKK--KTSKGYGILDGRFP 139
K EL +QT +KK KT KG+GILDG P
Sbjct: 470 SKIELRSMQTPQKKKQKTPKGFGILDGVVP 499
>ref|XP_004511740.1| PREDICTED: DNA repair endonuclease UVH1-like isoform X1 [Cicer
arietinum]
Length = 985
Score = 137 bits (344), Expect = 5e-30
Identities = 84/205 (40%), Positives = 110/205 (53%), Gaps = 3/205 (1%)
Frame = -3
Query: 744 YLKYLDALRVSEGIHTVWIFANPSHKIFDFSKKRVYKVIKSDGG--NVVSGNMSNIRKDT 571
YLKYLD LRVSE +VWIFA S+KIFD++KKRVY +++SDG N S + N ++
Sbjct: 297 YLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLVRSDGVKLNESSKGIKNKKRKV 356
Query: 570 XXXXXXXXXXXXXXXXXXXXXSCDSENSTSKIELEVVGEEMPKWTXXXXXXXXXXXXRQK 391
S +S I LE V EE PKW RQK
Sbjct: 357 ----------KGDNKDTEEADVTSSTSSNHGIVLEEVLEEAPKWKVLREILEEVEEERQK 406
Query: 390 AKLSNENQSISEDAWDDGGGSVLVACKDERACVQLQDCIYKGAQKLMLEEWERYLLGKTE 211
+ E + + D G VLVACKDER+C+QL++CI +K+M +EW++YLL K +
Sbjct: 407 QGMLRE--EVLAEGEDTDNGIVLVACKDERSCLQLEECITNNTKKVMRDEWKKYLLNKVQ 464
Query: 210 LHGIQTTRKK-KTSKGYGILDGRFP 139
L I +KK K KG+GILDG P
Sbjct: 465 LRDIVNKKKKPKDPKGFGILDGVTP 489