BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016293
         (1087 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW15594.1| hypothetical protein PHAVU_007G085300g [Phaseolus...   297   4e-78
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   297   6e-78
ref|XP_006606191.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   296   1e-77
ref|XP_006589473.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   296   1e-77
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   296   1e-77
ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   295   2e-77
ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   293   8e-77
ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244...   291   2e-76
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              291   2e-76
ref|XP_006473155.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   290   9e-76
ref|XP_004496407.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   288   2e-75
ref|XP_004496408.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   288   3e-75
ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ...   287   4e-75
ref|XP_004237844.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   287   6e-75
ref|XP_006434555.1| hypothetical protein CICLE_v10001190mg [Citr...   285   2e-74
ref|XP_004984202.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   284   4e-74
ref|XP_002467782.1| hypothetical protein SORBIDRAFT_01g033960 [S...   282   2e-73
gb|EOY20130.1| Pseudouridine synthase isoform 1 [Theobroma cacao]     281   3e-73
ref|XP_006359054.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   281   4e-73
ref|NP_001145731.1| pseudouridylate synthase [Zea mays] gi|21988...   278   2e-72

>gb|ESW15594.1| hypothetical protein PHAVU_007G085300g [Phaseolus vulgaris]
          Length = 427

 Score =  297 bits (761), Expect = 4e-78
 Identities = 141/245 (57%), Positives = 183/245 (74%), Gaps = 4/245 (1%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDYV+VLN+ LP+DIR++GWCP   DFH+RF CLSREYKY+F++E L+I  M+ A  K 
Sbjct: 178 EIDYVRVLNRVLPHDIRILGWCPAPVDFHARFSCLSREYKYFFWKEKLNIPAMESAGNKL 237

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           IG HDFRNFCKMDA NVH +RR I+ F+I P   R+ G  + V++++G+ FLW+QVRCM 
Sbjct: 238 IGTHDFRNFCKMDAANVHNYRRHITLFEISPTDVRYNGNQLWVIKIKGSAFLWHQVRCMV 297

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
           AVLF++G+GLESPNVID LLDT++ VRKPQY +ASE+PLVL  CEF+ I F CS+DA   
Sbjct: 298 AVLFMVGKGLESPNVIDMLLDTTRIVRKPQYIMASEVPLVLQCCEFDDIKFMCSTDAGDA 357

Query: 574 MKLHMQQQLQFNLLKSIIYHEATCNLP--EGDDALIP--RTSKKTTHVPLSLRPTEPSYE 741
           ++LH+  + Q   L++ I+HEA  N      D +L+P   T KK +HVPL  RPTEPSYE
Sbjct: 358 LRLHLVNECQIFQLQATIFHEALLNCVPLSNDQSLLPFQGTKKKVSHVPLMSRPTEPSYE 417

Query: 742 ERKKK 756
           ER+ K
Sbjct: 418 ERRAK 422


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
           [Glycine max]
          Length = 426

 Score =  297 bits (760), Expect = 6e-78
 Identities = 140/249 (56%), Positives = 185/249 (74%), Gaps = 4/249 (1%)
 Frame = +1

Query: 22  QDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIA 201
           Q   EIDYV VLN+ LPNDIR++GWCP   DFH+RF CLSREYKY+F++ENL+I  +++A
Sbjct: 173 QHEGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVA 232

Query: 202 CKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQV 381
             K +G+HDFRNFCKMDA NVH +RR I+ F+I     R+    + V+++RG+ FLW+QV
Sbjct: 233 GNKLVGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQV 292

Query: 382 RCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSD 561
           RCM AVLF++G+GLESPNVID LLDTS+ +RKPQY +ASE+PLVL  CEF+ I F CSSD
Sbjct: 293 RCMVAVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSD 352

Query: 562 AAKDMKLHMQQQLQFNLLKSIIYHEATCNLP--EGDDALIP--RTSKKTTHVPLSLRPTE 729
           A + +++H+  + Q   L++ I+HEA  N      D +L+P   + KK +HVPL  RPTE
Sbjct: 353 AGEALRVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLPFQGSKKKVSHVPLMSRPTE 412

Query: 730 PSYEERKKK 756
           PSYEER+ K
Sbjct: 413 PSYEERRAK 421


>ref|XP_006606191.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
           [Glycine max]
          Length = 425

 Score =  296 bits (758), Expect = 1e-77
 Identities = 139/245 (56%), Positives = 184/245 (75%), Gaps = 4/245 (1%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDYV VLN+ LPNDIR++GWCP   DFH+RF CLSREYKY+F++ENL+I  +++A  K 
Sbjct: 176 EIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKL 235

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           +G+HDFRNFCKMDA NVH +RR I+ F+I     R+    + V+++RG+ FLW+QVRCM 
Sbjct: 236 VGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQVRCMV 295

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
           AVLF++G+GLESPNVID LLDTS+ +RKPQY +ASE+PLVL  CEF+ I F CSSDA + 
Sbjct: 296 AVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEA 355

Query: 574 MKLHMQQQLQFNLLKSIIYHEATCNLP--EGDDALIP--RTSKKTTHVPLSLRPTEPSYE 741
           +++H+  + Q   L++ I+HEA  N      D +L+P   + KK +HVPL  RPTEPSYE
Sbjct: 356 LRVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLPFQGSKKKVSHVPLMSRPTEPSYE 415

Query: 742 ERKKK 756
           ER+ K
Sbjct: 416 ERRAK 420


>ref|XP_006589473.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X5
           [Glycine max]
          Length = 406

 Score =  296 bits (757), Expect = 1e-77
 Identities = 139/254 (54%), Positives = 185/254 (72%), Gaps = 4/254 (1%)
 Frame = +1

Query: 22  QDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIA 201
           Q   EIDYV+VLN+ LPNDIR++GWCP   DFH+RF CLSREYKY+F++ENL+I  M+ A
Sbjct: 153 QHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQAMESA 212

Query: 202 CKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQV 381
             K +G+HDFRNFCKMDA NVH +RR+I  F+I P   R+    + V+++RG+ FLW+QV
Sbjct: 213 GNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQV 272

Query: 382 RCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSD 561
           RCM  VLF++G+GLESPNVID LLDT++ +RKPQY +ASE+PLVL  CEF+ I F CSS+
Sbjct: 273 RCMVVVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSE 332

Query: 562 AAKDMKLHMQQQLQFNLLKSIIYHEATCN-LPEGDDALI---PRTSKKTTHVPLSLRPTE 729
           A + + +H+  + Q   L++ I+HEA  N +P  +D  +     + KK +HVPL  RPTE
Sbjct: 333 AGEALHVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLHFQGSKKKVSHVPLMSRPTE 392

Query: 730 PSYEERKKKFEEKA 771
           PSYEER+ K    A
Sbjct: 393 PSYEERRAKLNTVA 406


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
           [Glycine max]
          Length = 426

 Score =  296 bits (757), Expect = 1e-77
 Identities = 139/254 (54%), Positives = 185/254 (72%), Gaps = 4/254 (1%)
 Frame = +1

Query: 22  QDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIA 201
           Q   EIDYV+VLN+ LPNDIR++GWCP   DFH+RF CLSREYKY+F++ENL+I  M+ A
Sbjct: 173 QHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQAMESA 232

Query: 202 CKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQV 381
             K +G+HDFRNFCKMDA NVH +RR+I  F+I P   R+    + V+++RG+ FLW+QV
Sbjct: 233 GNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQV 292

Query: 382 RCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSD 561
           RCM  VLF++G+GLESPNVID LLDT++ +RKPQY +ASE+PLVL  CEF+ I F CSS+
Sbjct: 293 RCMVVVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSE 352

Query: 562 AAKDMKLHMQQQLQFNLLKSIIYHEATCN-LPEGDDALI---PRTSKKTTHVPLSLRPTE 729
           A + + +H+  + Q   L++ I+HEA  N +P  +D  +     + KK +HVPL  RPTE
Sbjct: 353 AGEALHVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLHFQGSKKKVSHVPLMSRPTE 412

Query: 730 PSYEERKKKFEEKA 771
           PSYEER+ K    A
Sbjct: 413 PSYEERRAKLNTVA 426


>ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
           [Glycine max]
          Length = 425

 Score =  295 bits (755), Expect = 2e-77
 Identities = 138/250 (55%), Positives = 184/250 (73%), Gaps = 4/250 (1%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDYV+VLN+ LPNDIR++GWCP   DFH+RF CLSREYKY+F++ENL+I  M+ A  K 
Sbjct: 176 EIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQAMESAGNKL 235

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           +G+HDFRNFCKMDA NVH +RR+I  F+I P   R+    + V+++RG+ FLW+QVRCM 
Sbjct: 236 VGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQVRCMV 295

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
            VLF++G+GLESPNVID LLDT++ +RKPQY +ASE+PLVL  CEF+ I F CSS+A + 
Sbjct: 296 VVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEA 355

Query: 574 MKLHMQQQLQFNLLKSIIYHEATCN-LPEGDDALI---PRTSKKTTHVPLSLRPTEPSYE 741
           + +H+  + Q   L++ I+HEA  N +P  +D  +     + KK +HVPL  RPTEPSYE
Sbjct: 356 LHVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLHFQGSKKKVSHVPLMSRPTEPSYE 415

Query: 742 ERKKKFEEKA 771
           ER+ K    A
Sbjct: 416 ERRAKLNTVA 425


>ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X3
           [Glycine max]
          Length = 420

 Score =  293 bits (750), Expect = 8e-77
 Identities = 138/252 (54%), Positives = 183/252 (72%), Gaps = 2/252 (0%)
 Frame = +1

Query: 22  QDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIA 201
           Q   EIDYV+VLN+ LPNDIR++GWCP   DFH+RF CLSREYKY+F++ENL+I  M+ A
Sbjct: 173 QHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQAMESA 232

Query: 202 CKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQV 381
             K +G+HDFRNFCKMDA NVH +RR+I  F+I P   R+    + V+++RG+ FLW+QV
Sbjct: 233 GNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQV 292

Query: 382 RCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSD 561
           RCM  VLF++G+GLESPNVID LLDT++ +RKPQY +ASE+PLVL  CEF+ I F CSS+
Sbjct: 293 RCMVVVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSE 352

Query: 562 AAKDMKLHMQQQLQFNLLKSIIYHEATCNLPEGDDALI--PRTSKKTTHVPLSLRPTEPS 735
           A + + +H+  + Q   L++ I+HEA  N      +L+    + KK +HVPL  RPTEPS
Sbjct: 353 AGEALHVHLVNECQIYQLQAAIFHEALLNY----QSLLHFQGSKKKVSHVPLMSRPTEPS 408

Query: 736 YEERKKKFEEKA 771
           YEER+ K    A
Sbjct: 409 YEERRAKLNTVA 420


>ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244254 [Vitis vinifera]
          Length = 1576

 Score =  291 bits (746), Expect = 2e-76
 Identities = 139/249 (55%), Positives = 183/249 (73%), Gaps = 7/249 (2%)
 Frame = +1

Query: 34   EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
            EIDY++VLN+ LP DIRV+GWCPV   FH+RF CLSREYKY+F+R NL+I  M+ A KKF
Sbjct: 1324 EIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAMESAGKKF 1383

Query: 214  IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
            +G+HDFRNFCKMDA NVH +RR I  F+I P   R+ G  +  ++++G+ FLW+QVRCM 
Sbjct: 1384 VGEHDFRNFCKMDAVNVHNYRRHIISFEIAPTNNRYDGNQLWAIKIKGSAFLWHQVRCMV 1443

Query: 394  AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
            AVLF+IGQGLESP+V+D LLDT +T RKPQY +A E+PLVL  CEFEG+ F CSSDA + 
Sbjct: 1444 AVLFMIGQGLESPDVVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKFICSSDAGQA 1503

Query: 574  MKLHMQQQLQFNLLKSIIYHEA------TCNLPEGDDALIPRTSKK-TTHVPLSLRPTEP 732
            +++H++ + +   L++ I+HEA      + N  E  ++L   T KK   H+ L  RPTEP
Sbjct: 1504 LRMHLENECRTYQLQAAIFHEALLSCLPSANSAEKQNSLNNGTIKKEAAHIDLMSRPTEP 1563

Query: 733  SYEERKKKF 759
            SYEER+ KF
Sbjct: 1564 SYEERRAKF 1572


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  291 bits (746), Expect = 2e-76
 Identities = 139/249 (55%), Positives = 183/249 (73%), Gaps = 7/249 (2%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDY++VLN+ LP DIRV+GWCPV   FH+RF CLSREYKY+F+R NL+I  M+ A KKF
Sbjct: 214 EIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAMESAGKKF 273

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           +G+HDFRNFCKMDA NVH +RR I  F+I P   R+ G  +  ++++G+ FLW+QVRCM 
Sbjct: 274 VGEHDFRNFCKMDAVNVHNYRRHIISFEIAPTNNRYDGNQLWAIKIKGSAFLWHQVRCMV 333

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
           AVLF+IGQGLESP+V+D LLDT +T RKPQY +A E+PLVL  CEFEG+ F CSSDA + 
Sbjct: 334 AVLFMIGQGLESPDVVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKFICSSDAGQA 393

Query: 574 MKLHMQQQLQFNLLKSIIYHEA------TCNLPEGDDALIPRTSKK-TTHVPLSLRPTEP 732
           +++H++ + +   L++ I+HEA      + N  E  ++L   T KK   H+ L  RPTEP
Sbjct: 394 LRMHLENECRTYQLQAAIFHEALLSCLPSANSAEKQNSLNNGTIKKEAAHIDLMSRPTEP 453

Query: 733 SYEERKKKF 759
           SYEER+ KF
Sbjct: 454 SYEERRAKF 462


>ref|XP_006473155.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Citrus
           sinensis]
          Length = 437

 Score =  290 bits (741), Expect = 9e-76
 Identities = 136/253 (53%), Positives = 185/253 (73%), Gaps = 4/253 (1%)
 Frame = +1

Query: 22  QDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIA 201
           Q  DEIDYV+VLN+ LP DIRV+GW P   DF +RF C+SREYKY+F+RENL+++ M+ A
Sbjct: 184 QIEDEIDYVRVLNRVLPKDIRVIGWSPAPTDFSARFSCISREYKYFFWRENLNLSAMESA 243

Query: 202 CKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQV 381
            KKF+G+HDFRNFCKMDA NVH ++R+++ F+I P    + G  +  +++RG+ FLW+QV
Sbjct: 244 GKKFVGEHDFRNFCKMDAANVHNYKRRVTSFEISPCYISFEGNQLCAIKIRGSAFLWHQV 303

Query: 382 RCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSD 561
           RCM AVLF+IGQGLES +VI+ LLDT+   RKPQY +A E+PLVL  CEFEG+ F CS D
Sbjct: 304 RCMVAVLFMIGQGLESIDVIESLLDTNGIPRKPQYNMAPEIPLVLQSCEFEGLKFTCSLD 363

Query: 562 AAKDMKLHMQQQLQFNLLKSIIYHEATCN-LPEGDDALIPR---TSKKTTHVPLSLRPTE 729
           A  D++LH++ + Q   L++ I+HEA  N LP  +D    R     KK +H+PL  RPTE
Sbjct: 364 AGHDLRLHLRNECQVYQLQAAIFHEALLNCLPLANDQNSLRNGMVKKKASHIPLFSRPTE 423

Query: 730 PSYEERKKKFEEK 768
           P+Y+ER+ K + +
Sbjct: 424 PTYKERRAKLDSR 436


>ref|XP_004496407.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
           [Cicer arietinum]
          Length = 428

 Score =  288 bits (738), Expect = 2e-75
 Identities = 134/249 (53%), Positives = 183/249 (73%), Gaps = 4/249 (1%)
 Frame = +1

Query: 22  QDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIA 201
           Q   EIDYV+VLN+ LPNDIR++GWCPV  DFH+RF CLSREYKY+F++ENL+I  M+ A
Sbjct: 175 QHEGEIDYVRVLNRVLPNDIRILGWCPVPVDFHARFSCLSREYKYFFWKENLNILAMESA 234

Query: 202 CKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQV 381
             KF+G+HDFRNFCKMDA NVH + R+I+ F I P    + G  +  ++++G+ FLW+QV
Sbjct: 235 GTKFLGEHDFRNFCKMDAANVHNYMRRITMFKISPTDVSYDGNQLWAIKIKGSAFLWHQV 294

Query: 382 RCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSD 561
           RCM AVLFL+G+GLESP++ D LLDT++  RKPQY +ASE+PLVL  CEF+ + F CSS+
Sbjct: 295 RCMVAVLFLVGKGLESPDITDLLLDTNRIPRKPQYTMASEVPLVLQSCEFKDVKFMCSSE 354

Query: 562 AAKDMKLHMQQQLQFNLLKSIIYHEATCN-LPEGDDALIP---RTSKKTTHVPLSLRPTE 729
           A + +  H+  + +   L++ I+HEA  N +P   D ++P    + KK +H+PL  RPTE
Sbjct: 355 AGEALHSHLVNECKIYQLQAAIFHEAILNSVPPLHDQILPAVRESKKKASHIPLMSRPTE 414

Query: 730 PSYEERKKK 756
           PSYEER+ K
Sbjct: 415 PSYEERRAK 423


>ref|XP_004496408.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
           [Cicer arietinum]
          Length = 427

 Score =  288 bits (736), Expect = 3e-75
 Identities = 133/245 (54%), Positives = 182/245 (74%), Gaps = 4/245 (1%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDYV+VLN+ LPNDIR++GWCPV  DFH+RF CLSREYKY+F++ENL+I  M+ A  KF
Sbjct: 178 EIDYVRVLNRVLPNDIRILGWCPVPVDFHARFSCLSREYKYFFWKENLNILAMESAGTKF 237

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           +G+HDFRNFCKMDA NVH + R+I+ F I P    + G  +  ++++G+ FLW+QVRCM 
Sbjct: 238 LGEHDFRNFCKMDAANVHNYMRRITMFKISPTDVSYDGNQLWAIKIKGSAFLWHQVRCMV 297

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
           AVLFL+G+GLESP++ D LLDT++  RKPQY +ASE+PLVL  CEF+ + F CSS+A + 
Sbjct: 298 AVLFLVGKGLESPDITDLLLDTNRIPRKPQYTMASEVPLVLQSCEFKDVKFMCSSEAGEA 357

Query: 574 MKLHMQQQLQFNLLKSIIYHEATCN-LPEGDDALIP---RTSKKTTHVPLSLRPTEPSYE 741
           +  H+  + +   L++ I+HEA  N +P   D ++P    + KK +H+PL  RPTEPSYE
Sbjct: 358 LHSHLVNECKIYQLQAAIFHEAILNSVPPLHDQILPAVRESKKKASHIPLMSRPTEPSYE 417

Query: 742 ERKKK 756
           ER+ K
Sbjct: 418 ERRAK 422


>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 438

 Score =  287 bits (735), Expect = 4e-75
 Identities = 138/246 (56%), Positives = 181/246 (73%), Gaps = 4/246 (1%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDYV+VLN+ LPNDIR++GWCPV  DF +RF CLSREYKY+F  +NL++  M+ A KKF
Sbjct: 198 EIDYVRVLNRVLPNDIRIIGWCPVPNDFSARFSCLSREYKYFFRGDNLNLLAMESAGKKF 257

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           IG+HDFRNFCKMDA NVH +RR I+ F+I P  ER+ G  +  +++RG+ FLW+QVRCM 
Sbjct: 258 IGEHDFRNFCKMDAMNVHNYRRNITSFEISPCHERYEGNQLFAIKIRGSAFLWHQVRCMV 317

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
           AVLF+IGQGLESP+VID LLDT +T RKPQY +A E+PLVLH C+FEG+ F CS+DA K 
Sbjct: 318 AVLFMIGQGLESPDVIDVLLDTVRTPRKPQYPMAPEIPLVLHSCDFEGLQFTCSTDAGKA 377

Query: 574 MKLHMQQQLQFNLLKSIIYHEATCN-LPEGDDALIPRT---SKKTTHVPLSLRPTEPSYE 741
           ++ H++ + +   L++ I+HEA  + LP  +   +       KK +HVPL LRPT     
Sbjct: 378 LRTHLENECRLYQLQAAIFHEAIFSCLPLSNGRSLSNNGTCEKKASHVPLMLRPT----- 432

Query: 742 ERKKKF 759
           ERK K+
Sbjct: 433 ERKSKY 438


>ref|XP_004237844.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Solanum
           lycopersicum]
          Length = 420

 Score =  287 bits (734), Expect = 6e-75
 Identities = 138/247 (55%), Positives = 182/247 (73%), Gaps = 4/247 (1%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDYV+VLN+ LPNDIR++GW P+   F +RF CLSR YKY+F++ NL++  M+ A KKF
Sbjct: 173 EIDYVRVLNRVLPNDIRIMGWSPIPVGFSARFSCLSRVYKYFFWQGNLNLTAMQTAAKKF 232

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           +G+HDFRNFCKMDA NVH +RR I  F+IVP  ER     +M+++++G+ FLW+QVRCM 
Sbjct: 233 LGEHDFRNFCKMDADNVHNYRRHIISFEIVPFNERDNDDQLMIMKIKGSAFLWHQVRCMV 292

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
           AVLFLIGQGLESPNVID LLD  +T RKPQ+ +A E+PLVL  CEFEG+ F CSSD  + 
Sbjct: 293 AVLFLIGQGLESPNVIDLLLDIERTPRKPQFPMAPEIPLVLQSCEFEGLKFICSSDTKQA 352

Query: 574 MKLHMQQQLQFNLLKSIIYHEATCNLP--EGDDALIPRTSKK--TTHVPLSLRPTEPSYE 741
           +  H++++ +   L+S IYHEA  N    E D+ +    +KK   +H+PL  RPTEPSYE
Sbjct: 353 LNEHLERECRSYKLQSAIYHEALLNSSCIEIDNNISSDHTKKKRASHIPLLSRPTEPSYE 412

Query: 742 ERKKKFE 762
           ER+KK +
Sbjct: 413 ERRKKLD 419


>ref|XP_006434555.1| hypothetical protein CICLE_v10001190mg [Citrus clementina]
           gi|557536677|gb|ESR47795.1| hypothetical protein
           CICLE_v10001190mg [Citrus clementina]
          Length = 437

 Score =  285 bits (730), Expect = 2e-74
 Identities = 134/253 (52%), Positives = 184/253 (72%), Gaps = 4/253 (1%)
 Frame = +1

Query: 22  QDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIA 201
           Q  DEIDYV+VLN+ LP DIRV+GW P   DF +RF C+SR+YKY+F+RENL+++ M+ A
Sbjct: 184 QIEDEIDYVRVLNRVLPKDIRVMGWSPAPTDFSARFSCISRKYKYFFWRENLNLSAMESA 243

Query: 202 CKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQV 381
            KKF+G+HDFRNFCKMDA NVH ++R ++ F+I P    + G  +  +++RG+ FLW+QV
Sbjct: 244 GKKFVGEHDFRNFCKMDAANVHNYKRHVTSFEISPCYISFEGNQLCAIKIRGSAFLWHQV 303

Query: 382 RCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSD 561
           RCM AVLF+IGQGLES +VI+ LLDT+   RKPQY +A E+PLVL  C+F+G+ F CS D
Sbjct: 304 RCMVAVLFMIGQGLESIDVIESLLDTNGIPRKPQYNMAPEIPLVLQSCDFDGLKFTCSLD 363

Query: 562 AAKDMKLHMQQQLQFNLLKSIIYHEATCN-LPEGDDALIPR---TSKKTTHVPLSLRPTE 729
           A  D++LH++ + Q   L++ I+HEA  N LP  +D    R     KK +H+PL  RPTE
Sbjct: 364 AGHDLRLHLRNECQVYQLQAAIFHEALLNCLPLANDQNSLRNGMVKKKASHIPLFSRPTE 423

Query: 730 PSYEERKKKFEEK 768
           P+YEER+ K + +
Sbjct: 424 PTYEERRAKLDSR 436


>ref|XP_004984202.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
           [Setaria italica] gi|514819007|ref|XP_004984203.1|
           PREDICTED: tRNA pseudouridine(38/39) synthase-like
           isoform X2 [Setaria italica]
          Length = 468

 Score =  284 bits (727), Expect = 4e-74
 Identities = 135/250 (54%), Positives = 178/250 (71%)
 Frame = +1

Query: 19  IQDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKI 198
           + +  EIDYVKVLN+ LP DIRV+GWCPV ADFH+RF CL REYKY F+R +LDI EM+ 
Sbjct: 214 LDERSEIDYVKVLNRILPRDIRVLGWCPVPADFHARFTCLGREYKYLFWRGDLDILEMQK 273

Query: 199 ACKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQ 378
           A  KFIG+HDFRNFCKMDA NV  ++R+I++F I    +R    ++  + ++GT FLW+Q
Sbjct: 274 AASKFIGEHDFRNFCKMDAANVSNYKRRITEFTISSCDKRSYNDELCSMTIKGTAFLWHQ 333

Query: 379 VRCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSS 558
           VRCM AVLFLIGQGLESP+V+D LLD +KT RKPQYK+A+E+PL+L  C+F+   F CSS
Sbjct: 334 VRCMVAVLFLIGQGLESPSVVDSLLDITKTPRKPQYKMAAELPLILRSCQFDKADFMCSS 393

Query: 559 DAAKDMKLHMQQQLQFNLLKSIIYHEATCNLPEGDDALIPRTSKKTTHVPLSLRPTEPSY 738
           D ++ +  H+  +    +L++ I+HEA   LP  +   +    KK  H+PL  R TEPSY
Sbjct: 394 DVSQSLTEHLNDEYHHYMLQAEIFHEALSCLPCPESNPLETLQKKRNHIPLLSRQTEPSY 453

Query: 739 EERKKKFEEK 768
           EER  K + K
Sbjct: 454 EERIAKVKTK 463


>ref|XP_002467782.1| hypothetical protein SORBIDRAFT_01g033960 [Sorghum bicolor]
           gi|241921636|gb|EER94780.1| hypothetical protein
           SORBIDRAFT_01g033960 [Sorghum bicolor]
          Length = 459

 Score =  282 bits (721), Expect = 2e-73
 Identities = 135/250 (54%), Positives = 177/250 (70%)
 Frame = +1

Query: 19  IQDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKI 198
           + +  EIDYVKVLN+ LP DIRV+GWCPV ADFH+RF CLSREYKY F++ +LDI EM+ 
Sbjct: 204 LDERSEIDYVKVLNRILPRDIRVLGWCPVPADFHARFTCLSREYKYLFWKGDLDILEMQK 263

Query: 199 ACKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQ 378
           A  KFIG+HDFRNFCKMDA NV  +RR+I++F I     R    ++  + ++G+ FLW+Q
Sbjct: 264 AASKFIGEHDFRNFCKMDAANVSNYRRRITEFTISACDRRSNNDELCSMMIKGSAFLWHQ 323

Query: 379 VRCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSS 558
           VRCM AVLFLIGQGLESP+V+D LLD +KT RKPQYK+A E+PL+L  C F+   F CSS
Sbjct: 324 VRCMVAVLFLIGQGLESPSVVDSLLDITKTPRKPQYKMAPELPLILRSCLFDKANFMCSS 383

Query: 559 DAAKDMKLHMQQQLQFNLLKSIIYHEATCNLPEGDDALIPRTSKKTTHVPLSLRPTEPSY 738
           DA++ +  H   +   ++L++ I+H A+  LP  +   +    KK  H+PL  R TEPSY
Sbjct: 384 DASQSLTEHFNDEYHHHMLQAEIFHIASSCLPFPEPNSLETLQKKRNHIPLLSRQTEPSY 443

Query: 739 EERKKKFEEK 768
           EER  K + K
Sbjct: 444 EERISKVKTK 453


>gb|EOY20130.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
          Length = 445

 Score =  281 bits (719), Expect = 3e-73
 Identities = 138/249 (55%), Positives = 182/249 (73%), Gaps = 4/249 (1%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDYV+VLN+ LPNDIR++GW PVS DF++RF CL+REY Y+F+R NL+  +M+ A KKF
Sbjct: 196 EIDYVRVLNRVLPNDIRILGWSPVSIDFNARFSCLAREYTYFFWRGNLNFPDMENAGKKF 255

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           IG+HDFRNFCKMDA NVH +RR+++ F+I     R+ G  + V++V+G+ FLW+QVRCM 
Sbjct: 256 IGEHDFRNFCKMDAANVHNYRRRVTLFEISSSNMRFEGNQLCVIKVKGSAFLWHQVRCMV 315

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
           AVLF+IGQG+ES  VID LLDT KT RKPQY +A E+PLVL  C+FE + F CSSD+ + 
Sbjct: 316 AVLFMIGQGVESIAVIDALLDTEKTPRKPQYAMAPEIPLVLQSCDFEDVNFICSSDSGQA 375

Query: 574 MKLHMQQQLQFNLLKSIIYHEATCN---LPEGDDALIPRTSKK-TTHVPLSLRPTEPSYE 741
           +++H++ + Q   L+S I+HEA  +   L  G   L   T KK  +HVPL  RPTEPSYE
Sbjct: 376 LRIHLENECQAYQLQSAIFHEALLSCLPLANGKSLLNEGTIKKVASHVPLLSRPTEPSYE 435

Query: 742 ERKKKFEEK 768
           ER  K   +
Sbjct: 436 ERCAKLNSR 444


>ref|XP_006359054.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Solanum
           tuberosum]
          Length = 481

 Score =  281 bits (718), Expect = 4e-73
 Identities = 135/245 (55%), Positives = 180/245 (73%), Gaps = 4/245 (1%)
 Frame = +1

Query: 34  EIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKIACKKF 213
           EIDYV+VLN+ LPNDIR++GW P+   F +RF CLSR YKY+F++ NL+I  M+ A +KF
Sbjct: 234 EIDYVRVLNRVLPNDIRIMGWSPIPVGFSARFSCLSRVYKYFFWQGNLNITAMQTAAEKF 293

Query: 214 IGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQVRCMA 393
           +G+HDFRNFCKMDA NVH +RR I  F+I+P  E      +M+++++G+ FLW+QVRCM 
Sbjct: 294 LGEHDFRNFCKMDADNVHNYRRHIISFEILPFNESDKADQLMIMKIKGSAFLWHQVRCMV 353

Query: 394 AVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSSDAAKD 573
           AVLFLIGQGLESPNVID LLD  +T RKPQ+ +A E+PLVL  CEFEG+ F CSSD  + 
Sbjct: 354 AVLFLIGQGLESPNVIDLLLDIERTPRKPQFPMAPEIPLVLQSCEFEGLKFICSSDTNQA 413

Query: 574 MKLHMQQQLQFNLLKSIIYHEATCNLP--EGDDALIPRTSKK--TTHVPLSLRPTEPSYE 741
           +  H++++ +   L+S I+HEA  N    E D+ +    +KK   +H+PL  RPTEPSYE
Sbjct: 414 LNEHLERECRSYKLQSAIFHEALLNSSCIEIDNNISSDHTKKKGASHIPLLSRPTEPSYE 473

Query: 742 ERKKK 756
           ER+KK
Sbjct: 474 ERRKK 478


>ref|NP_001145731.1| pseudouridylate synthase [Zea mays] gi|219884209|gb|ACL52479.1|
           unknown [Zea mays] gi|414867029|tpg|DAA45586.1| TPA:
           pseudouridylate synthase [Zea mays]
          Length = 486

 Score =  278 bits (712), Expect = 2e-72
 Identities = 134/250 (53%), Positives = 176/250 (70%)
 Frame = +1

Query: 19  IQDTDEIDYVKVLNKALPNDIRVVGWCPVSADFHSRFGCLSREYKYYFFRENLDINEMKI 198
           + +  EIDYVKVLN+ LP DIRV+GWCPV ADFH+RF CLSREYKY F++ +LDI EM+ 
Sbjct: 231 LDERSEIDYVKVLNRILPRDIRVLGWCPVPADFHARFTCLSREYKYLFWKGDLDILEMQK 290

Query: 199 ACKKFIGDHDFRNFCKMDAQNVHTFRRKISKFDIVPLPERWAGKDVMVLQVRGTTFLWYQ 378
           A  KFIG+HDFRNFCKMDA NV  +RR I++F I     R    ++  + ++G+ FLW+Q
Sbjct: 291 AASKFIGEHDFRNFCKMDAANVSNYRRHITEFTISACDRRSNNDELCSMTIKGSAFLWHQ 350

Query: 379 VRCMAAVLFLIGQGLESPNVIDDLLDTSKTVRKPQYKIASEMPLVLHLCEFEGIVFRCSS 558
           VRCM AVLFLIGQGLESP+V+D LLD  KT RKPQYK+A E+PL+L  C F+   F CS+
Sbjct: 351 VRCMVAVLFLIGQGLESPSVVDSLLDIMKTSRKPQYKMAPELPLILQSCLFDKANFMCSA 410

Query: 559 DAAKDMKLHMQQQLQFNLLKSIIYHEATCNLPEGDDALIPRTSKKTTHVPLSLRPTEPSY 738
           DA++ +  H+  + + ++L++ I+H A+  LP  +        KK  H+PL  R TEPSY
Sbjct: 411 DASRSLTEHLNDEYRHHMLQAEIFHIASSCLPFPEPNSSETPQKKRNHIPLLSRETEPSY 470

Query: 739 EERKKKFEEK 768
           EER  K + K
Sbjct: 471 EERISKVKAK 480