BLASTX nr result
ID: Ephedra26_contig00016091
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00016091
(983 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 301 2e-79
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe... 300 6e-79
gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus pe... 295 2e-77
gb|EMJ22948.1| hypothetical protein PRUPE_ppb022800mg, partial [... 286 6e-75
gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus pe... 286 1e-74
gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobrom... 283 9e-74
gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobrom... 282 1e-73
gb|EMJ21583.1| hypothetical protein PRUPE_ppa021778mg [Prunus pe... 281 4e-73
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 277 4e-72
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 276 7e-72
gb|EOX94045.1| DNA/RNA polymerases superfamily protein, partial ... 276 9e-72
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 275 2e-71
gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [... 267 4e-69
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 265 2e-68
gb|EMJ09180.1| hypothetical protein PRUPE_ppa015715mg, partial [... 264 3e-68
gb|EMJ08022.1| hypothetical protein PRUPE_ppa025991mg [Prunus pe... 263 8e-68
gb|EOX92840.1| DNA/RNA polymerases superfamily protein [Theobrom... 262 2e-67
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 262 2e-67
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 262 2e-67
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 261 3e-67
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 301 bits (772), Expect = 2e-79
Identities = 151/330 (45%), Positives = 214/330 (64%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI+ F+ A + +K P F WT+ A +F +IK + P+L LPDF KVF+
Sbjct: 862 FYRRFIRNFSSIMAPITECMK--PGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFE 919
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+ DAS +G VL QEGHPVAFFSEKLN EFYA++QA+R W+HYL +E
Sbjct: 920 VACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHWQHYLSYKE 979
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRSLAVM 442
F+L DH AL ++NS+ + ++ +W LQ F F+++H G EN+VADALSR++L ++
Sbjct: 980 FVLYSDHEALRYLNSQKKLNS-RHAKWSSFLQLFTFNLKHCAGIENKVADALSRKALLLV 1038
Query: 441 QCEVDE--FHHLRASYSHDHTFSEVWDAIASGS-TEYPDFNVQDDLLFQHGNRLCIPAGS 271
F L+ Y +D F +V+ ++ SGS DF + + LF + NRLC+P S
Sbjct: 1039 NMSTTTIGFEELKHCYDNDADFGDVYSSLLSGSKATCIDFQILEGYLF-YKNRLCLPRTS 1097
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
LR+ ++ E H GG+ GH GRDKT+ L++ R+FWPS+ K V +K+CR CQ+ KG + +T
Sbjct: 1098 LRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQVGKGSKQNT 1157
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLP+P +PW+ +SMDF+LGLPRT+ G
Sbjct: 1158 GLYTPLPVPSKPWEDLSMDFVLGLPRTQRG 1187
>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 300 bits (768), Expect = 6e-79
Identities = 153/329 (46%), Positives = 212/329 (64%), Gaps = 2/329 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRF++ F+ A + +K F W E E SF IK+ +C APVLALP+F KVF+
Sbjct: 865 FYRRFVRHFSSIVAPITECLKKGR--FSWGEEQERSFADIKEKLCTAPVLALPNFEKVFE 922
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS VG VL Q+ PVAFFSEKL++ EFYA+++AL++W HYL+ +E
Sbjct: 923 VECDASGVGVGAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQKE 982
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F+L DH+AL++INS+ K+ + RWV LQ+F F ++H G NRVADALSRR+ L
Sbjct: 983 FVLFTDHQALKYINSQKNIDKM-HARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLI 1041
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGSL 268
+ EV F L+ Y D F E+W + D+ + + LF+ GN+LCIP SL
Sbjct: 1042 TLTQEVVGFECLKELYEGDADFGEIWTK-CTNQEPMADYFLNEGYLFK-GNQLCIPVSSL 1099
Query: 267 REKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDTG 88
REKL+ + H GGL+GH+GRDKT+ M+ R++WP + + V V++C CQ +KG +TG
Sbjct: 1100 REKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTG 1159
Query: 87 LYQPLPIPMRPWQSISMDFILGLPRTRSG 1
LY PLP+P WQ ++MDF+LGLPRT+ G
Sbjct: 1160 LYMPLPVPNDIWQDLAMDFVLGLPRTQRG 1188
>gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 295 bits (754), Expect = 2e-77
Identities = 151/327 (46%), Positives = 210/327 (64%), Gaps = 2/327 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FY RF++ F+ AA + +K F W E E SF IK+ +C APVLALP+F KVF+
Sbjct: 873 FYMRFVRHFSSIAAPITECLKKGR--FSWGEEQERSFADIKEKLCTAPVLALPNFEKVFE 930
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS VG VL Q+ PVAFFSEKL++ EFYA+++AL++W HYL+ +E
Sbjct: 931 VECDASGVGVGAVLLQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQKE 990
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F+L DH+AL++INS+ K+ + RWV LQ+F F ++H G NRVADALSRR+ L
Sbjct: 991 FVLFTDHQALKYINSQKNIDKM-HARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLI 1049
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGSL 268
+ EV F L+ Y D F E+W + D+ + + LF+ GN+LCIP SL
Sbjct: 1050 TLTQEVVGFECLKELYEGDDDFREIWTK-CTNQEPMTDYFLTEGYLFK-GNQLCIPVSSL 1107
Query: 267 REKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDTG 88
REKL+ + H GGL+GH+GRDKT+ M+ R++WP + + V V++C CQ +KG +TG
Sbjct: 1108 REKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTG 1167
Query: 87 LYQPLPIPMRPWQSISMDFILGLPRTR 7
LY PLP+P WQ ++MDF+LG PRT+
Sbjct: 1168 LYMPLPVPNDIWQDLAMDFVLGFPRTQ 1194
>gb|EMJ22948.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
Length = 722
Score = 286 bits (733), Expect = 6e-75
Identities = 148/330 (44%), Positives = 216/330 (65%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI F+ A + + +K +F+WT A +F +K + EAPVL P+ +KVF+
Sbjct: 33 FYRRFIPSFSTIMAPITDCMKQG--EFRWTHAATRAFEALKQKMTEAPVLHHPELTKVFE 90
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+ DAS +GGVL QEGHPVA+FSEKLNE EFY+I++ALR W++YLLP E
Sbjct: 91 VARDASGVGIGGVLSQEGHPVAYFSEKLNEAKQKYSTYNKEFYSIVRALRYWQYYLLPNE 150
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRSLAV- 445
F+L DH+AL +++S+ + ++++W E LQ F F ++H G +N+VADALSR + +
Sbjct: 151 FVLYSDHQALRYLHSQRNVSS-RHIKWTEYLQIFTFVIRHRPGVDNKVADALSRVGVILQ 209
Query: 444 -MQCEVDEFHHLRASYSHDHTFSEVWDAI-ASGSTEYPDFNVQDDLLFQHGNRLCIPAGS 271
+ +V F ++ YS F ++ + A ++ DF ++D LF+ G +LCIP S
Sbjct: 210 SLTAQVVGFDKIKTEYSSCPDFGLIFQEVTARNRRDHVDFLLRDGYLFR-GTQLCIPRTS 268
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
LR+ LV E H GGLAGH G+DKT+ L+ R++WPS+ + V++ + +CR CQLAK + +T
Sbjct: 269 LRDFLVWELHAGGLAGHFGKDKTITLVADRFYWPSLKRDVAHILAQCRTCQLAKARKQNT 328
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLPIP PW+ +SMDF+LGLP+T G
Sbjct: 329 GLYTPLPIPHTPWKDLSMDFVLGLPKTARG 358
>gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 286 bits (731), Expect = 1e-74
Identities = 152/329 (46%), Positives = 203/329 (61%), Gaps = 2/329 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRF++ F+ A + +K F W E E SF IK+ +C APVLALP+F KVF+
Sbjct: 855 FYRRFVRHFSSITAPITECLKKGR--FSWGDEQERSFADIKEKLCTAPVLALPNFEKVFE 912
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS VG VL Q+ PVAFFSEKL++ EFYA+++AL++W HYL+ +E
Sbjct: 913 VECDASGVGVGAVLSQDKRPVAFFSEKLSDACQKWSTYDQEFYAVVRALKQWEHYLIQKE 972
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRR-SLAV 445
F+L DH+AL RWV LQ+F F ++H G NRV DALSRR SL V
Sbjct: 973 FVLFTDHQAL---------------RWVTFLQKFSFVIRHTSGKTNRVVDALSRRASLLV 1017
Query: 444 MQC-EVDEFHHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGSL 268
Q EV F L+ Y D F E+W + D+ + + LF+ GN+LCIP SL
Sbjct: 1018 TQTQEVVGFECLKELYEGDDDFREIWTK-CTNQEPMADYFLNEGYLFK-GNQLCIPVSSL 1075
Query: 267 REKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDTG 88
REKL+ + H GGL+GH+GRDKT+ MK R++WP + + V V++C CQ +KG +TG
Sbjct: 1076 REKLIQDLHGGGLSGHLGRDKTIAGMKERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTG 1135
Query: 87 LYQPLPIPMRPWQSISMDFILGLPRTRSG 1
LY PLP+P WQ ++MDF+LGLPRT+ G
Sbjct: 1136 LYMPLPVPNDIWQDLAMDFVLGLPRTQRG 1164
>gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 786
Score = 283 bits (723), Expect = 9e-74
Identities = 148/330 (44%), Positives = 207/330 (62%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI+ F+ + + ++K F+W+ A+ +F ++K + EAPVLALPDF K+F
Sbjct: 232 FYRRFIRNFSSIMSPITESLK--KDGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFV 289
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS +G VL Q+G P+ FFSEKL + EFYA+++A+R W+HYL RE
Sbjct: 290 VECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYRE 349
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F + DH+AL +++S+ + + ++ +W L EF FS+++ G N VADALSRR L+
Sbjct: 350 FAVYSDHQALRYLHSQKKLSN-QHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLS 408
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVW-DAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGS 271
VM +V F L+ YS D FS++ D S E + + +D LF+ GN+LCIP GS
Sbjct: 409 VMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFK-GNQLCIPEGS 467
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
LRE+++ E H GL GH GRDKTL ++ RY+WP M + V VKRC C KG +T
Sbjct: 468 LREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNT 527
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLP P PW +SMDF+LGLP+T G
Sbjct: 528 GLYVPLPEPDAPWIHLSMDFVLGLPKTAKG 557
>gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1452
Score = 282 bits (722), Expect = 1e-73
Identities = 148/330 (44%), Positives = 207/330 (62%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI+ F+ + + ++K F+W+ A+ +F ++K + EAPVLALPDF K+F
Sbjct: 780 FYRRFIRNFSSIMSPITESLK--KDGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFV 837
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS +G VL Q+G P+ FFSEKL + EFYA+++A+R W+HYL RE
Sbjct: 838 VECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYRE 897
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F + DH+AL +++S+ + + ++ +W L EF FS+++ G N VADALSRR L+
Sbjct: 898 FAVYSDHQALRYLHSQKKLSN-QHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLS 956
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVW-DAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGS 271
VM +V F L+ YS D FS++ D S E + + +D LF+ GN+LCIP GS
Sbjct: 957 VMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFK-GNQLCIPEGS 1015
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
LRE+++ E H GL GH GRDKTL ++ RY+WP M + V VKRC C KG +T
Sbjct: 1016 LREQIIRELHGNGLGGHFGRDKTLVMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNT 1075
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLP P PW +SMDF+LGLP+T G
Sbjct: 1076 GLYVPLPEPDAPWIHLSMDFVLGLPKTTKG 1105
>gb|EMJ21583.1| hypothetical protein PRUPE_ppa021778mg [Prunus persica]
Length = 1384
Score = 281 bits (718), Expect = 4e-73
Identities = 145/321 (45%), Positives = 203/321 (63%), Gaps = 2/321 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRF++ F+ A + +K F W E E SF IK+ +C APVLALP+F KVF+
Sbjct: 790 FYRRFVRHFSSIVAPITECLKKGR--FSWGEEQERSFADIKEKLCTAPVLALPNFEKVFE 847
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS V VL Q+ PVAFFSEKL++ EFYA+++AL++W HYL+ +E
Sbjct: 848 VECDASGVGVEAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQKE 907
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F+L DH+AL++INS+ K+ + RWV LQ+F F ++H G NRVADALSRR+ L
Sbjct: 908 FVLFTDHQALKYINSQKNIDKM-HARWVTFLQKFSFVIKHTSGKTNRVADALSRRASMLI 966
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGSL 268
+ EV F L+ Y D F E+W + D+ + + LF+ GN+LCIP SL
Sbjct: 967 TLTQEVVGFECLKELYEGDADFREIWTK-CTNQEPMADYFLNEGYLFK-GNQLCIPVSSL 1024
Query: 267 REKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDTG 88
REKL+ + H GGL+GH+GRDKT+ M+ R++WP + + V V++C CQ +KG +T
Sbjct: 1025 REKLIQDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTR 1084
Query: 87 LYQPLPIPMRPWQSISMDFIL 25
LY PLP+P WQ ++MDF+L
Sbjct: 1085 LYMPLPVPNDIWQDLAMDFVL 1105
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 277 bits (709), Expect = 4e-72
Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFIK F+ A + +K +FKW +AE SF IK+ +CE+P+L LP+F+K+F+
Sbjct: 843 FYRRFIKDFSTLMAPITECMKKG--EFKWGDKAESSFNIIKEKLCESPILTLPNFNKLFE 900
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS +G VL QE P+A+FSEKL+ EFYAI++AL W HYL PR
Sbjct: 901 VECDASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFYAIVRALNHWSHYLKPRP 960
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRR--SLA 448
F+L DH AL++IN + ++ +WVE LQ F FS ++I G +N VADALSRR L+
Sbjct: 961 FVLHSDHEALKYINGQ-HKLNHRHAKWVEFLQSFNFSSKYIEGKDNIVADALSRRFIMLS 1019
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVWDAIASGSTEYPD-FNVQDDLLFQHGNRLCIPAGS 271
M+ V F +++ Y D F W+ + SG + + VQ+ LF GN+LC+P G
Sbjct: 1020 FMEQRVLGFEYMKELYVEDPDFKGEWELLQSGQIKLKSKYLVQNGFLF-FGNKLCVPRGP 1078
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
R L+ E H GLAGH G KT ++++ +++WP M V + +KRC CQ +K T
Sbjct: 1079 YRNLLIREVHSNGLAGHFGIQKTYDILQEQFYWPKMLGDVQDVIKRCAPCQQSKSY-FQT 1137
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
G Y PLP+P +PW+ ISMDFI+ LPRT+ G
Sbjct: 1138 GPYTPLPVPNQPWEDISMDFIVALPRTQRG 1167
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 276 bits (707), Expect = 7e-72
Identities = 145/330 (43%), Positives = 201/330 (60%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFIK F+ A + ++ +F+WT +A+ SF +IK +C P+L LPDF ++F+
Sbjct: 855 FYRRFIKNFSTVVAPITECMRKG--EFQWTEQAQQSFEKIKQLMCNTPILKLPDFDQLFE 912
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS +G VL Q PVA+FSEKLN EFYAII+AL W HYL P+
Sbjct: 913 VECDASGVGIGAVLIQSQKPVAYFSEKLNGAKLKYSTYDKEFYAIIRALMHWNHYLKPKP 972
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F+L DH AL++IN + ++ +WVE LQ F FS ++ G +N VADALSRR L+
Sbjct: 973 FVLHSDHEALKYINGQ-HKLNFRHAKWVEFLQSFTFSSKYKEGKKNVVADALSRRHSLLS 1031
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVWDAIASG-STEYPDFNVQDDLLFQHGNRLCIPAGS 271
VM V F ++ Y D FSE W G + + +Q+ LFQ GN+LC+P GS
Sbjct: 1032 VMSNRVLGFEFMKELYKEDPDFSEEWITQTEGHKNQGSKYLLQEGFLFQ-GNKLCVPRGS 1090
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
R+ L+ E H GG+ GH G KTLE+++ +++WP M V ++RC CQL+K
Sbjct: 1091 YRDLLIREVHSGGMGGHFGVQKTLEILQDQFYWPRMMGDVQIILRRCSKCQLSKS-SFQP 1149
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
G Y PLP+P +PW+ +SMDFI+ LPRT+ G
Sbjct: 1150 GPYTPLPVPSKPWEDLSMDFIVALPRTQRG 1179
>gb|EOX94045.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
Length = 624
Score = 276 bits (706), Expect = 9e-72
Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI+ F+ + + ++K F+W+ A+ +F ++K + EAPVLALPDF K+F
Sbjct: 232 FYRRFIRNFSSIMSPITESLK--KDGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFV 289
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS L Q+G P+ FFSEKL + EFYA+++A+R W+HYL RE
Sbjct: 290 VECDASYVGXXXXLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYRE 349
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F + DH+AL +++S+ + + ++ +W L EF FS+++ G N VADALSRR L+
Sbjct: 350 FAVYSDHQALRYLHSQKKLSN-QHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLS 408
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVW-DAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGS 271
VM +V F L+ YS D FS++ D S E + + +D LF+ GN+LCIP GS
Sbjct: 409 VMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFK-GNQLCIPEGS 467
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
LRE+++ E H GL GH GRDKTL ++ RY+WP M + V VKRC C KG +T
Sbjct: 468 LREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNT 527
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLP P PW +SMDF+LGLP+T G
Sbjct: 528 GLYVPLPEPDAPWIHLSMDFVLGLPKTAKG 557
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 275 bits (703), Expect = 2e-71
Identities = 145/330 (43%), Positives = 204/330 (61%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAM-VNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVF 805
FYRRF++ F+ AA + V T KG P F W E++F +KD + AP+L LPDF+K F
Sbjct: 957 FYRRFVQDFSTIAAPLNVLTKKGVP--FTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTF 1014
Query: 804 QLEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPR 625
+LE DAS +GGVL QEG PVA+FSEKL+ E YA+++ L W+HYL P+
Sbjct: 1015 ELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPK 1074
Query: 624 EFILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRSLAV 445
EF++ DH +L+ I S+ + + ++ +WVE ++ F + ++H +G EN +ADALSRR +
Sbjct: 1075 EFVIHSDHESLKHIRSQGKLNR-RHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLL 1133
Query: 444 MQCEVDEF--HHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGS 271
Q + F ++ Y+HD F++V G T + F + D +F+ N+LCIPA S
Sbjct: 1134 TQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRT-WNKFVINDGFVFR-ANKLCIPASS 1191
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
+R L+ E H GGL GH G KT +++ +FWP M + V FV RC CQ AK H
Sbjct: 1192 VRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPH 1251
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLP+P PW+ ISMDF+LGLPRT+ G
Sbjct: 1252 GLYMPLPVPTVPWEDISMDFVLGLPRTKRG 1281
Score = 167 bits (424), Expect = 4e-39
Identities = 107/359 (29%), Positives = 174/359 (48%), Gaps = 32/359 (8%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
+YRRFI+ F+ A M +K + F W+ + E +F +K+ + +PVL LPD K F
Sbjct: 1749 YYRRFIENFSKIARPMTQLLKKEEK-FVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFM 1807
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+ DAS +G VL QEGH VA+ S +L E A++ AL+ WRHYL+
Sbjct: 1808 VYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLIGNR 1867
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS---- 454
+ DH++L++I +++ L+ RW+E ++++ + + G N VADALSR+S
Sbjct: 1868 CEIYTDHKSLKYIFTQSD-LNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSHCNT 1926
Query: 453 --------------------------LAVMQCEVDEFHHLRASYSHDHTFSEVWDAIASG 352
LA ++ + +R + +D + + G
Sbjct: 1927 LGVRGIPPELNQQMEALNLSIVSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQG 1986
Query: 351 STEYPDFNVQDDLLFQHGNRLCIP-AGSLREKLVAEKHQGGLAGHVGRDKTLELMKRRYF 175
F + + NR+C+P L++ ++ E H+ + H G K +K +Y+
Sbjct: 1987 KA--AGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYW 2044
Query: 174 WPSMGKQVSNFVKRCRICQLAKGV-RHDTGLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
W SM ++++ FV C +CQ K + GL QPL +P W I MDFI GLP+T+ G
Sbjct: 2045 WVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGG 2103
>gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
Length = 1364
Score = 267 bits (683), Expect = 4e-69
Identities = 141/327 (43%), Positives = 201/327 (61%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI F+ A + + +K +F+WT A +F +K + EAPVL P+ +KVF+
Sbjct: 793 FYRRFIPSFSTIMAPITDCMKQG--EFRWTHAATRAFEALKQKMTEAPVLRHPELTKVFE 850
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+ DAS +GGVL QEGH VA+F+EKLNE EFYAI++ALR W++YLLP E
Sbjct: 851 VACDASGVGIGGVLSQEGHLVAYFNEKLNEAKQKYSTYDKEFYAIVRALRYWQYYLLPNE 910
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRSLAVM 442
F+L DH+AL +++S+ + ++++W E LQ F F ++H G +N+VADALSR
Sbjct: 911 FVLYSDHQALRYLHSQRNVSS-RHIKWTEYLQIFTFVIRHRPGVDNKVADALSR------ 963
Query: 441 QCEVDEFHHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGSLRE 262
+ A ++ DF ++D LF+ G +LCIP SLR+
Sbjct: 964 ------------------------EVTAGNRRDHVDFLLRDGYLFR-GTQLCIPRTSLRD 998
Query: 261 KLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDTGLY 82
LV E H GGLAGH G+DKT+ L+ R++WPS+ + V++ + +C CQLAK + +TGLY
Sbjct: 999 FLVWELHAGGLAGHFGKDKTITLVADRFYWPSLKRDVAHILAQCCTCQLAKARKQNTGLY 1058
Query: 81 QPLPIPMRPWQSISMDFILGLPRTRSG 1
PLPIP PW+ +SMDF+LGLP+T G
Sbjct: 1059 TPLPIPHTPWKDLSMDFVLGLPKTARG 1085
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 265 bits (677), Expect = 2e-68
Identities = 141/329 (42%), Positives = 197/329 (59%), Gaps = 2/329 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRF+K F+ AA + K F W + EH+F +KD + AP+L LPDF+K F+
Sbjct: 960 FYRRFVKDFSTIAAPLNELTKKGVH-FSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFE 1018
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
LE DAS +GGVL QEG PVA+FSEKL+ E YA+++ L W+HYL P+E
Sbjct: 1019 LECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKE 1078
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRSLAVM 442
F++ DH +L+ I S+ + + ++ +WVE ++ F + ++H +G EN +ADALSRR +
Sbjct: 1079 FVIHSDHESLKHIRSQGKLNR-RHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLN 1137
Query: 441 QCEVDEF--HHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGSL 268
Q + F ++ Y HD F +V G + + V D +F+ N+LCIPA S+
Sbjct: 1138 QLDYKIFGLETIKDQYVHDADFKDVLLHCKDGKG-WNKYIVSDGFVFR-ANKLCIPASSV 1195
Query: 267 REKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDTG 88
R L+ E H GGL GH G KT +++ +FWP M + V V RC CQ AK + G
Sbjct: 1196 RLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHG 1255
Query: 87 LYQPLPIPMRPWQSISMDFILGLPRTRSG 1
LY PLP+P PW+ ISMDF+LGLPRTR G
Sbjct: 1256 LYLPLPVPSAPWEDISMDFVLGLPRTRKG 1284
>gb|EMJ09180.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 264 bits (675), Expect = 3e-68
Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI GF+ A + + +K F WT A +F +K + +APVL
Sbjct: 772 FYRRFIPGFSTIMAPITDCMKQGA--FLWTHAAAKAFTILKQKMTQAPVL---------- 819
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
L QEGHPVA+FSEKLNE EFYA++QALR W++YLLP E
Sbjct: 820 -------------LNQEGHPVAYFSEKLNEAKQRYSTYDKEFYAVVQALRYWQYYLLPNE 866
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F+L DH+AL++++S+ + ++++W E LQ F F ++H G +N+VADALSR + L
Sbjct: 867 FVLYSDHQALKYLHSQ-RTISSRHVKWSEYLQIFTFVLRHRPGIDNKVADALSRVATILH 925
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVWDAIASGST-EYPDFNVQDDLLFQHGNRLCIPAGS 271
M +V F ++ YS F ++ +++G+ EY DF +D LF+ G +LCIP S
Sbjct: 926 TMTVQVTGFDRIKTEYSSCPDFGIIFHEVSNGNRREYVDFITRDGFLFR-GTQLCIPRTS 984
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
LRE LV E H GGLAGH G+DKT+ L++ R++WPS+ + V++ + +CR CQLAK + +T
Sbjct: 985 LREFLVWELHGGGLAGHFGKDKTIALVEDRFYWPSLKRDVAHLISQCRTCQLAKARKRNT 1044
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLPIP PW+ +SMDF+LGLP+T G
Sbjct: 1045 GLYTPLPIPHTPWKDLSMDFVLGLPKTSRG 1074
>gb|EMJ08022.1| hypothetical protein PRUPE_ppa025991mg [Prunus persica]
Length = 1274
Score = 263 bits (672), Expect = 8e-68
Identities = 142/330 (43%), Positives = 202/330 (61%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI GF+ A + + +K F WT A +F +K + +APV PD +KVF+
Sbjct: 599 FYRRFIPGFSIIMALITDCMKQGA--FLWTHAAAKAFTILKQKMTQAPVFRHPDLTKVFE 656
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+ DAS +GGVL QEGHPVA+FSEKLNE EFY ++QALR W++YLLP E
Sbjct: 657 VTCDASGVGIGGVLSQEGHPVAYFSEKLNEAKQRYSTHDKEFYDVVQALRYWQYYLLPNE 716
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F+L DH+AL++++S+ + I +N+VADALSR + L
Sbjct: 717 FVLYSDHQALKYLHSQ----------------------RTISSIDNKVADALSRVATILH 754
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVWDAIASGST-EYPDFNVQDDLLFQHGNRLCIPAGS 271
M +V+ F ++ YS F ++ +++G+ EY DF +D LF+ +LCIP S
Sbjct: 755 TMTVQVNGFDRIKTEYSSCPDFGIIFHEVSNGNRREYVDFITRDGFLFRR-TQLCIPRTS 813
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
L E LV E H GGLAGH G+DKT+ L++ ++WPS+ + V++ + +CR CQLAK + +T
Sbjct: 814 LLEFLVWELHGGGLAGHFGKDKTIALVEDHFYWPSLKRDVAHLISQCRTCQLAKARKRNT 873
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
G+Y PLPIP PW+ +SMDF+LGLP+T G
Sbjct: 874 GVYTPLPIPHAPWKDLSMDFVLGLPKTSRG 903
>gb|EOX92840.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 647
Score = 262 bits (669), Expect = 2e-67
Identities = 143/331 (43%), Positives = 203/331 (61%), Gaps = 4/331 (1%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRFI+ F+ + ++K F+W+ A+ +F ++K + EAPVLALPDF K+F
Sbjct: 48 FYRRFIQNFSSIMGPITESLK--KDGFEWSHFAQKAFERVKALMTEAPVLALPDFEKLFV 105
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
+E DAS +G VL Q+G + FFSEKL + EFYA+++A+R W+HYL E
Sbjct: 106 VECDASHVGIGAVLSQDGRSIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYCE 165
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRS--LA 448
F + DH+AL +++S+ + + ++ +W L EF FS+++ G N VADALSRR L+
Sbjct: 166 FAVYSDHQALRYLHSQKKLSN-QHAKWSFFLNEFNFSLKYKSGQSNTVADALSRRCKMLS 224
Query: 447 VMQCEVDEFHHLRASYSHDHTFSEVWDAIASGSTEYPD--FNVQDDLLFQHGNRLCIPAG 274
VM +V F L+ YS D FS++ A GS + + + + +D LF+ GN+LCI G
Sbjct: 225 VMSTQVTGFEELKNQYSSDSYFSKII-ADLQGSLQAGNLPYRLHEDYLFK-GNQLCILEG 282
Query: 273 SLREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHD 94
SLRE+++ E H GL GH GRDKTL ++ RY+WP M + V VKRC C KG +
Sbjct: 283 SLREQIIGELHGNGLGGHFGRDKTLAMVADRYYWPKMHRDVERLVKRCSTCLFGKGSAQN 342
Query: 93 TGLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
TGLY PL P PW +SMDF+LGLP+ G
Sbjct: 343 TGLYVPLLEPDAPWIHLSMDFVLGLPKIAKG 373
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 262 bits (669), Expect = 2e-67
Identities = 135/330 (40%), Positives = 202/330 (61%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVN-TVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVF 805
FYRRF++GF+ AA + T KG F+W E +F ++K + E P+L LPDF+K F
Sbjct: 960 FYRRFVRGFSTIAAPLNELTKKGVA--FQWGEPQEKAFQELKKRLSEGPLLVLPDFTKTF 1017
Query: 804 QLEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPR 625
++E DAS +GGVL Q G PVA+FSEKL E YA+++AL W+HYL P+
Sbjct: 1018 EVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPK 1077
Query: 624 EFILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRSLAV 445
EF++ DH AL+++ + + + ++ +WVE ++ F + +++ +G EN VADALSR+++ +
Sbjct: 1078 EFVIHSDHEALKYLKGQAKLNR-RHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLL 1136
Query: 444 MQCEVDE--FHHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGS 271
Q EV ++ YS D FSE + +G + +++ D LF+ N+LC+P S
Sbjct: 1137 NQLEVKVTGIESIKELYSADLDFSEPYAKCTAGKG-WEKYHIHDGFLFR-ANKLCVPHCS 1194
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
+R L+ E H GGL GH G KT +++ ++WP M + V V+RC C AK +
Sbjct: 1195 VRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPH 1254
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLP+P PW+ ISMDF+LGLPRT+ G
Sbjct: 1255 GLYTPLPVPSAPWEDISMDFVLGLPRTKRG 1284
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 262 bits (669), Expect = 2e-67
Identities = 140/330 (42%), Positives = 200/330 (60%), Gaps = 3/330 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAM-VNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVF 805
FY RF++ F+ AA + T KG P F W E++F +K + AP+L LPDF+K F
Sbjct: 936 FYCRFVQDFSTIAAPLNALTKKGVP--FTWGTSQENAFHMLKHKLTHAPLLQLPDFNKTF 993
Query: 804 QLEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPR 625
+LE DAS +GGVL QEG VA+FSEKL+ E YA+++ L W+HYL P+
Sbjct: 994 ELECDASGIGLGGVLLQEGKLVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPK 1053
Query: 624 EFILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRSLAV 445
EF++ DH +L+ I S+ + + ++ +WVE ++ F + ++H +G EN +A+ALSRR +
Sbjct: 1054 EFVIHSDHESLKHIRSQGKLNR-RHAKWVEFIESFPYVIKHKKGKENIIANALSRRYTLL 1112
Query: 444 MQCEVDEF--HHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGS 271
Q + F ++ Y+HD F++V G T + F + D +F+ N+LCIPA S
Sbjct: 1113 TQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRT-WNKFVINDGFVFR-ANKLCIPASS 1170
Query: 270 LREKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDT 91
+R L+ E H GGL GH G KT +++ +FWP M + V FV RC CQ AK H
Sbjct: 1171 VRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPH 1230
Query: 90 GLYQPLPIPMRPWQSISMDFILGLPRTRSG 1
GLY PLP+P PW+ ISMDF+LGLPRT+ G
Sbjct: 1231 GLYMPLPVPTVPWEDISMDFVLGLPRTKRG 1260
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 261 bits (667), Expect = 3e-67
Identities = 138/329 (41%), Positives = 197/329 (59%), Gaps = 2/329 (0%)
Frame = -3
Query: 981 FYRRFIKGFADKAAAMVNTVKGAPRDFKWTREAEHSF*QIKDAICEAPVLALPDFSKVFQ 802
FYRRF++ F+ AA + N V F W E +F +KD + AP+L LP+F+K F+
Sbjct: 1001 FYRRFVRDFSTIAAPL-NEVTKKDVPFVWGTAQEEAFTVLKDKLTYAPLLQLPNFNKTFE 1059
Query: 801 LEVDASADAVGGVLQQEGHPVAFFSEKLNEVXXXXXXXXXEFYAIIQALRRWRHYLLPRE 622
LE DAS +GGVL Q+G PVA+FSEK + E YA+++ L W+HYL P+E
Sbjct: 1060 LECDASGIGLGGVLLQDGKPVAYFSEKFSGPSLNYSTYDKELYALVRTLETWQHYLWPKE 1119
Query: 621 FILKIDHRALEFINSRTQPTKLKYLRWVEELQEFQFSMQHIRGSENRVADALSRRSLAVM 442
F++ DH +L+ I S+ + + ++ +WVE ++ F + ++H +G EN +ADALSRR +
Sbjct: 1120 FVIHSDHESLKHIKSQAKLNR-RHAKWVEFIETFPYVIKHKKGKENVIADALSRRYTMLS 1178
Query: 441 QCEVDEF--HHLRASYSHDHTFSEVWDAIASGSTEYPDFNVQDDLLFQHGNRLCIPAGSL 268
Q + F ++ Y HD F +V G T + F + D +F+ N+LCIPA S+
Sbjct: 1179 QLDFKIFGLETIKDQYVHDAEFKDVLQNCKEGRT-WNKFVLNDGFVFR-ANKLCIPASSV 1236
Query: 267 REKLVAEKHQGGLAGHVGRDKTLELMKRRYFWPSMGKQVSNFVKRCRICQLAKGVRHDTG 88
R L+ E H GGL GH G KT +++ +FWP M + V FV RC CQ AK + G
Sbjct: 1237 RLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHG 1296
Query: 87 LYQPLPIPMRPWQSISMDFILGLPRTRSG 1
LY PLP+P PW+ ISMDF+LGLPRT+ G
Sbjct: 1297 LYMPLPVPSVPWEDISMDFVLGLPRTKKG 1325