BLASTX nr result

ID: Ephedra26_contig00016076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016076
         (604 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGL53581.1| WUSCHEL homeobox protein WOX3 [Picea abies]             58   2e-06
emb|CAT02931.1| putative wuschel homeobox protein WOX3 [Gnetum g...    56   9e-06

>gb|AGL53581.1| WUSCHEL homeobox protein WOX3 [Picea abies]
          Length = 181

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = +1

Query: 67  RGKMRLSTALAQPTMMQ*N*AAE*LMILEEFYPSDMSTPNAEQIQ*ITDHLSLYGISCFK 246
           R ++R+ TA+ QP   + N   E LMILEE Y   + TPNA+QIQ IT HL+LYG    K
Sbjct: 26  RARIRVPTAMPQPATTRWNPTPEQLMILEEMYRGGIRTPNADQIQQITAHLALYGKIEGK 85

Query: 247 TCY**FWKAKCHKARSK 297
             +  +W  + HKAR +
Sbjct: 86  NVF--YW-FQNHKARDR 99


>emb|CAT02931.1| putative wuschel homeobox protein WOX3 [Gnetum gnemon]
          Length = 178

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = +1

Query: 67  RGKMRLST-ALAQPTMMQ*N*AAE*LMILEEFYPSDMSTPNAEQIQ*ITDHLSLYGISCF 243
           R ++R+   AL QP   + N  AE LMILEE Y   M TP+AEQIQ IT HLSLYG    
Sbjct: 20  RSRIRVPVGALPQPATTRWNPTAEQLMILEELYRGGMRTPSAEQIQQITAHLSLYGKIEG 79

Query: 244 KTCY**FWKAKCHKARSK 297
           K  +  +W  + HKAR +
Sbjct: 80  KNVF--YW-FQNHKARDR 94


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