BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016058
         (482 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237182.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
ref|XP_002521865.1| pentatricopeptide repeat-containing protein,...    82   6e-14
ref|XP_001779433.1| predicted protein [Physcomitrella patens] gi...    78   1e-12
gb|EOY32747.1| Pentatricopeptide repeat superfamily protein, put...    76   4e-12
ref|XP_006470889.1| PREDICTED: pentatricopeptide repeat-containi...    75   9e-12
ref|XP_006420692.1| hypothetical protein CICLE_v10004581mg [Citr...    75   9e-12
gb|EMT04238.1| hypothetical protein F775_13122 [Aegilops tauschii]     74   3e-11
ref|XP_002526170.1| pentatricopeptide repeat-containing protein,...    73   3e-11
ref|XP_006349790.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_004298632.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_006350181.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
emb|CBI27495.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|NP_001136745.1| hypothetical protein [Zea mays] gi|194696880...    70   2e-10
ref|XP_006386713.1| hypothetical protein POPTR_0002s19470g [Popu...    70   3e-10
ref|XP_002301519.2| hypothetical protein POPTR_0002s19470g [Popu...    70   3e-10
ref|XP_006647083.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|XP_004305146.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
gb|EXB28566.1| hypothetical protein L484_009725 [Morus notabilis]      69   5e-10
ref|XP_004236606.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10

>ref|XP_004237182.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Solanum lycopersicum]
          Length = 625

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
 Frame = +3

Query: 3   VLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIV 182
           +L+   V+S KW  +  L+KD R   +     T  +++ + +KSRKF++V ++LE   +V
Sbjct: 142 LLIRYLVNSSKWGSVFSLSKDLRTLKVLPDSSTCCRLISSCMKSRKFKIVNSFLELFIVV 201

Query: 183 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMT 362
             E  V  +++ MR Y KL MY  ++ ++  + S   VLD   YC +M  + K       
Sbjct: 202 DQEISVLAFDSAMRGYNKLHMYSSTVVLYEKMKSARLVLDPGCYCSIMEAHSKMGNSDKV 261

Query: 363 IRVFEEMVGKGVEPN----VVAYGILIDALGKQGKPRDALRVAR 482
           +  FEE   K VE      V  Y  L ++LGK G+  +AL   R
Sbjct: 262 VSFFEEFESKRVESTTPQYVQVYKCLCESLGKSGRAYEALEYFR 305


>ref|XP_002521865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538903|gb|EEF40501.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 449

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
 Frame = +3

Query: 3   VLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIV 182
           +L+   + S+ W  +  +A D     +     T S+++++ +K+RKFR+VE+ LE  +  
Sbjct: 128 LLIRYLMQSKNWDLILPVADDFNKYNVLPDSNTCSRLVYSCIKTRKFRIVESLLECFKCY 187

Query: 183 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRRE---- 350
            +E  V  +++ MR Y KL MY  +I V+  + + G  +D   YC +M  Y+K       
Sbjct: 188 -SEIPVLAFDSAMRGYNKLHMYSSTISVYEKMKAAGIFMDSGGYCHIMKAYQKIGNTGKV 246

Query: 351 --------------WRMTIRVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDALRV 476
                         +     VF EM GKG +  VVAY  ++   GK G+ RDA+R+
Sbjct: 247 TYASIINAYCRTGLYSKAEMVFLEMQGKGFDKCVVAYSSIVAMYGKTGRTRDAMRL 302


>ref|XP_001779433.1| predicted protein [Physcomitrella patens]
           gi|162669118|gb|EDQ55711.1| predicted protein
           [Physcomitrella patens]
          Length = 570

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/149 (28%), Positives = 76/149 (51%)
 Frame = +3

Query: 30  RKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVY 209
           R+W F Q++A+D     +     T S ++  + +        AW + +   G    V  Y
Sbjct: 57  RQWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAWFDRMHEAGCVPDVVTY 116

Query: 210 NTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEMVG 389
           +T++  Y K+G Y+++I ++  V   GW  D  +Y  ++  + +    R  + +FEEM G
Sbjct: 117 STMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKG 176

Query: 390 KGVEPNVVAYGILIDALGKQGKPRDALRV 476
            GV+P+ + Y I+I  LG+ G+   AL+V
Sbjct: 177 SGVQPDAIVYNIMIACLGRAGRMGHALKV 205


>gb|EOY32747.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 608

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
 Frame = +3

Query: 3   VLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIV 182
           +L+   V S+KW  +  L++D +   +     T S++++  +++RKF+VV   L+   + 
Sbjct: 127 LLIRYLVQSKKWDLVMSLSEDFKHYHVLPDSYTCSRLINACIRARKFKVVGTLLQ---VF 183

Query: 183 GNEKIVSV--YNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWR 356
            ++K+V++  +N+ M  Y KL M+  +I V+ T+   G   D ESYC +M  Y+   +  
Sbjct: 184 KSDKVVALIAFNSAMAGYNKLHMFRSTIAVYETMKFNGIFQDAESYCQIMEAYQHLGDMD 243

Query: 357 MTIRVFEEMVGKGVEPNVVA---YGILIDALGKQGKPRDALRVAR 482
                F+E   + ++    A   Y IL ++LGK G+  +AL   R
Sbjct: 244 KVAAFFDEFESRKLDLTPAAPRVYSILCESLGKSGRAYEALEYFR 288


>ref|XP_006470889.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Citrus sinensis]
          Length = 603

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
 Frame = +3

Query: 3   VLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIV 182
           +L+   V S+KW  +  L++D ++  +     T S+++ + V++RKF++    L+ + I 
Sbjct: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ-VFIT 180

Query: 183 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMT 362
             E  +  +N+ M  Y KL MY  +I V+  + S G VLD   YC +M  Y K  +    
Sbjct: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240

Query: 363 IRVFEEMVGKGVEPNVVA---YGILIDALGKQGKPRDALRVAR 482
             +F E   + ++    +   Y IL D+LGK G+  +AL+  R
Sbjct: 241 AALFLECESRELDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283


>ref|XP_006420692.1| hypothetical protein CICLE_v10004581mg [Citrus clementina]
           gi|557522565|gb|ESR33932.1| hypothetical protein
           CICLE_v10004581mg [Citrus clementina]
          Length = 603

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
 Frame = +3

Query: 3   VLVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIV 182
           +L+   V S+KW  +  L++D ++  +     T S+++ + V++RKF++    L+ + I 
Sbjct: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ-VFIT 180

Query: 183 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMT 362
             E  +  +N+ M  Y KL MY  +I V+  + S G VLD   YC +M  Y K  +    
Sbjct: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240

Query: 363 IRVFEEMVGKGVEPNVVA---YGILIDALGKQGKPRDALRVAR 482
             +F E   + ++    +   Y IL D+LGK G+  +AL+  R
Sbjct: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283


>gb|EMT04238.1| hypothetical protein F775_13122 [Aegilops tauschii]
          Length = 662

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 43/155 (27%), Positives = 76/155 (49%)
 Frame = +3

Query: 6   LVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVG 185
           +++ Y  S +W    KL ++ +   L     T + +M    K  + +    + + +   G
Sbjct: 178 MIHGYSTSGRWKEAAKLFREMKSRGLIPDTSTCNALMTYHCKHGRSKEAAEFFDAMTAKG 237

Query: 186 NEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTI 365
           +  ++S Y  L+  Y   G +   I++F +++S G+V D   + IL+  Y KR      +
Sbjct: 238 HRDVIS-YCILLHGYANEGCFADMIDLFNSMESNGFVADCHVFTILIDAYAKRGMMDEAM 296

Query: 366 RVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDAL 470
            +F EM  KGV PNVV Y  +I AL + G+  DA+
Sbjct: 297 LIFTEMREKGVSPNVVTYSTVIAALCRLGRLSDAM 331


>ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534547|gb|EEF36246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 42/157 (26%), Positives = 77/157 (49%)
 Frame = +3

Query: 6   LVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVG 185
           L+N Y  S K      L +  +   L+  + T + ++    ++ + R  +     ++I G
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319

Query: 186 NEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTI 365
               +  Y  L+    K G  E++I+VFR++ S  +   I  Y IL+    + R W   +
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379

Query: 366 RVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDALRV 476
            +F+E+   G+ PN+V Y I+I+ L K+GK  +A R+
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/93 (30%), Positives = 55/93 (59%)
 Frame = +3

Query: 198 VSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFE 377
           V VY++L+    ++G   +++ +F  + S+G   ++ +Y  L+    +   W+   R F 
Sbjct: 114 VIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFS 173

Query: 378 EMVGKGVEPNVVAYGILIDALGKQGKPRDALRV 476
           +MVG+G+ P+VV +  LID L K+GK ++A ++
Sbjct: 174 QMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKI 206


>ref|XP_006349790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Solanum tuberosum]
          Length = 808

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
 Frame = +3

Query: 3   VLVNSYVDSRKWSFLQKLAK-DPRVPLLSKKLG---TVSKIMHNSVKS---RKFRVVEAW 161
           V +N Y  S   + L K  K D    +L K +G   T + ++ N++ S   ++  + +A+
Sbjct: 337 VKLNEYTSSVLLNSLCKKGKTDKAAEILKKMMGNGLTPTDVLFNTILSGYCKEGNMEKAY 396

Query: 162 L--EGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCY 335
           L  + +EI G +     +NTL+  + +LGM E++ E  R +  K    ++++Y IL+  Y
Sbjct: 397 LTIDEMEISGVKPSCVTFNTLITKFCELGMMEEANEWLRKMLEKSVSPNVQTYNILIDGY 456

Query: 336 KKRREWRMTIRVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDA 467
            ++RE+     + EEM   G+ PNV+ YG LI++L K G+  +A
Sbjct: 457 GRKREFVRCFEILEEMENNGLNPNVITYGSLINSLCKDGRLLEA 500


>ref|XP_004298632.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 604

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/154 (26%), Positives = 83/154 (53%)
 Frame = +3

Query: 21  VDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIV 200
           V S+KW  +  +  D +   L     T S+++ + +++RKF+VV   L+  +  G+  + 
Sbjct: 131 VRSKKWDSILSVCTDFKTYDLLPDRYTCSRLVTSCIRARKFKVVRTLLQVFKSDGDVALP 190

Query: 201 SVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFEE 380
           ++ ++ MR Y +L MY  ++ VF  + S G   D   YC +M  Y ++ + +  + +F++
Sbjct: 191 AL-DSAMRGYNELHMYRSTMSVFEEMISAGIGPDSGCYCRIMEAYFRKGDHKKVVELFQD 249

Query: 381 MVGKGVEPNVVAYGILIDALGKQGKPRDALRVAR 482
           +  + ++   ++  IL  +L K GKP +AL + R
Sbjct: 250 LKSRQLDLTPLSIQILCQSLAKLGKPLEALEIFR 283



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
 Frame = +3

Query: 132 SRKFRVVEAW--LEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDI 305
           SRK  ++ A    E L ++G E     Y +++  Y +LG+Y K+  VFR ++ KG+   +
Sbjct: 376 SRKSTLLNAVKVFEDLILMGCEPGQVTYASVINVYCRLGLYSKAEMVFREMEEKGFDKCV 435

Query: 306 ESYCILMSCYKKRREWRMTIRVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDALRV 476
            +Y  ++  Y K    R  +R+  +M  +G +PNV  Y  L+D  G+    R   ++
Sbjct: 436 VAYSSMVVMYGKTGRPREAMRLVAKMKERGCKPNVWIYNSLMDMYGRDNNTRHVAKL 492


>ref|XP_006350181.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Solanum tuberosum]
          Length = 834

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/128 (31%), Positives = 67/128 (52%)
 Frame = +3

Query: 99  TVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTV 278
           T + IMH    S + +  EA    +   G +  +  YNTL+ AY   GM ++++ +F  +
Sbjct: 337 TFTTIMHMYSVSGQIKNCEAVFNTMLAEGLKPNIVSYNTLVGAYASRGMAQEALSIFDKM 396

Query: 279 DSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEMVGKGVEPNVVAYGILIDALGKQGKP 458
            S G   D+ SY  L++ Y +  +    +  FE+M    ++PN+V+Y +LIDA G  G  
Sbjct: 397 KSNGTRPDVVSYTSLLNAYGRSEQPERAMETFEQMKRNNLKPNLVSYNVLIDAYGSNGLL 456

Query: 459 RDALRVAR 482
             A++V R
Sbjct: 457 DKAVQVLR 464


>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/152 (27%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
 Frame = +3

Query: 36  WSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNT 215
           + + QK+ + P      + L  + +++ + +++RKFR+ E+ LE      ++  + V+N+
Sbjct: 71  FDYYQKVKERPEFRPDKETLERIIRLISSCIRARKFRITESLLEVFSY-NDDVALLVFNS 129

Query: 216 LMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEMVGKG 395
            M  Y KL M+  +I V+  + S G V + ESY  +M  Y K R++   + +F+E   + 
Sbjct: 130 AMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRK 189

Query: 396 VEPNVVA---YGILIDALGKQGKPRDALRVAR 482
           ++ +  +   Y IL ++LGK G+  +AL   R
Sbjct: 190 IDSSPFSTQIYRILCESLGKMGRAFEALEFFR 221


>ref|NP_001136745.1| hypothetical protein [Zea mays] gi|194696880|gb|ACF82524.1| unknown
           [Zea mays] gi|414875980|tpg|DAA53111.1| TPA:
           hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 421

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
 Frame = +3

Query: 3   VLVNSYVDSRKWSFLQ--KLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLE 176
           VL+N Y   R+       KL ++     L+  L T++ +++   K       E W++G+ 
Sbjct: 146 VLINGYWLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIA 205

Query: 177 IVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWR 356
             G +  V  YNTL+  Y +LG  +++      +  KG   ++++Y  L++ +   R+WR
Sbjct: 206 QRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWR 265

Query: 357 MTIRVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDALRV 476
               + +EM  KGV+ +VV Y +LI AL  +G+ R A+++
Sbjct: 266 SVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKL 305


>ref|XP_006386713.1| hypothetical protein POPTR_0002s19470g [Populus trichocarpa]
           gi|550345388|gb|ERP64510.1| hypothetical protein
           POPTR_0002s19470g [Populus trichocarpa]
          Length = 873

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/92 (38%), Positives = 57/92 (61%)
 Frame = +3

Query: 207 YNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEMV 386
           YNTL+  Y KLG +E++++V R +++ G   D+ +Y  L+  Y K+ ++ +  +VFEEM 
Sbjct: 407 YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMK 466

Query: 387 GKGVEPNVVAYGILIDALGKQGKPRDALRVAR 482
            + V PN++ Y  LID   K G  R+A+ V R
Sbjct: 467 ARHVSPNLLTYSTLIDVYSKGGLYREAMDVFR 498



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/122 (27%), Positives = 59/122 (48%)
 Frame = +3

Query: 81  LSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSI 260
           + K + T + ++    K  K+ VV    E ++       +  Y+TL+  Y K G+Y +++
Sbjct: 435 IRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAM 494

Query: 261 EVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEMVGKGVEPNVVAYGILIDAL 440
           +VFR     G   D+  Y  L+    K       + + +EM  +G+ PNVV Y  +IDA 
Sbjct: 495 DVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554

Query: 441 GK 446
           G+
Sbjct: 555 GR 556


>ref|XP_002301519.2| hypothetical protein POPTR_0002s19470g [Populus trichocarpa]
           gi|550345387|gb|EEE80792.2| hypothetical protein
           POPTR_0002s19470g [Populus trichocarpa]
          Length = 864

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/92 (38%), Positives = 57/92 (61%)
 Frame = +3

Query: 207 YNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEMV 386
           YNTL+  Y KLG +E++++V R +++ G   D+ +Y  L+  Y K+ ++ +  +VFEEM 
Sbjct: 407 YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMK 466

Query: 387 GKGVEPNVVAYGILIDALGKQGKPRDALRVAR 482
            + V PN++ Y  LID   K G  R+A+ V R
Sbjct: 467 ARHVSPNLLTYSTLIDVYSKGGLYREAMDVFR 498



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/122 (27%), Positives = 59/122 (48%)
 Frame = +3

Query: 81  LSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSI 260
           + K + T + ++    K  K+ VV    E ++       +  Y+TL+  Y K G+Y +++
Sbjct: 435 IRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAM 494

Query: 261 EVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEMVGKGVEPNVVAYGILIDAL 440
           +VFR     G   D+  Y  L+    K       + + +EM  +G+ PNVV Y  +IDA 
Sbjct: 495 DVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554

Query: 441 GK 446
           G+
Sbjct: 555 GR 556


>ref|XP_006647083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Oryza brachyantha]
          Length = 631

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/101 (33%), Positives = 59/101 (58%)
 Frame = +3

Query: 165 EGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKR 344
           E +E  G +  V  YN+L+    K G  +++  +F+ +  KG+  D+ +Y IL+ C+ K 
Sbjct: 481 EVMEASGCKPDVVTYNSLINCLGKNGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKS 540

Query: 345 REWRMTIRVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDA 467
            +  M   +F+EM+ +G  PN+V Y IL+D L ++GK  +A
Sbjct: 541 NKVEMACSLFDEMIAEGCTPNIVTYNILLDCLERRGKTEEA 581



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/86 (31%), Positives = 50/86 (58%)
 Frame = +3

Query: 198 VSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFE 377
           +  YN ++ +Y ++G+ +K+ E+F  +++ G   D+ +Y  L++C  K  +      +F+
Sbjct: 457 IFTYNIMISSYGRVGLVDKASELFEVMEASGCKPDVVTYNSLINCLGKNGDLDEAHMLFK 516

Query: 378 EMVGKGVEPNVVAYGILIDALGKQGK 455
           EM  KG +P+V  Y ILI+  GK  K
Sbjct: 517 EMQEKGYDPDVFTYSILIECFGKSNK 542


>ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Solanum tuberosum]
          Length = 564

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 1/158 (0%)
 Frame = +3

Query: 6   LVNSYVDSRKWSFLQKLAKDPRVPL-LSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIV 182
           L+N+ V ++++ F+  L K+ +  L ++  + T + +++   K          L+ + ++
Sbjct: 192 LLNALVQNKEYDFVYALFKNSQKKLHITPSVFTCNILLNALCKKDDINSAIKVLDEMPVM 251

Query: 183 GNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMT 362
           G    V  Y T++  Y+ LG    +  +F  +  +GW+ D  +Y ILM  Y K+ ++   
Sbjct: 252 GIIPNVVSYTTILGCYVSLGDLVGAKRMFDEIVDRGWLPDATTYTILMHGYAKQGKFIDA 311

Query: 363 IRVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDALRV 476
            ++ +EM   G+ PN V YGI+I+A  K+ K  +A+ +
Sbjct: 312 AKIMDEMEDNGIGPNEVTYGIMIEAFCKETKSGEAINL 349


>ref|XP_004305146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Fragaria vesca subsp. vesca]
          Length = 696

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/111 (31%), Positives = 69/111 (62%)
 Frame = +3

Query: 144 RVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCIL 323
           + +E + +  EI G E  +  YN L+ A+++   ++++ ++F   ++ G V ++++Y  L
Sbjct: 96  KALEIFHQMREIFGCEPGIRSYNALLNAFIESNQWDRAEQLFAYFETVGLVPNLQTYNTL 155

Query: 324 MSCYKKRREWRMTIRVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDALRV 476
           +    K+R++    R+ + M  KG++P+V++YG+LI+AL K GK  DAL V
Sbjct: 156 IKISCKKRQFEKARRLLDWMWEKGLKPDVMSYGVLINALAKNGKMGDALEV 206



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
 Frame = +3

Query: 6   LVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVG 185
           L+N++++S +W   ++L        L   L T + ++  S K R+F      L+ +   G
Sbjct: 120 LLNAFIESNQWDRAEQLFAYFETVGLVPNLQTYNTLIKISCKKRQFEKARRLLDWMWEKG 179

Query: 186 NEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTI 365
            +  V  Y  L+ A  K G    ++EVF  +  +G   D+  Y IL+  + +R ++    
Sbjct: 180 LKPDVMSYGVLINALAKNGKMGDALEVFDEMPERGVSPDVMCYNILIDGWFRRGDYAEAK 239

Query: 366 RVFEEMV-GKGVEPNVVAYGILIDALGKQGKPRDALRV 476
            V+E +V   G  PNVV+Y ++I  L K G+  ++L +
Sbjct: 240 EVWERLVMDSGAYPNVVSYNVMISGLCKCGRFGESLEI 277


>gb|EXB28566.1| hypothetical protein L484_009725 [Morus notabilis]
          Length = 871

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 34/93 (36%), Positives = 57/93 (61%)
 Frame = +3

Query: 204 VYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEM 383
           +YNTL+  Y KLG +E++++V + ++S G V D+ SY  L+  Y K+ ++    R++++M
Sbjct: 403 LYNTLLSIYAKLGRFEEALKVCKEMESSGIVRDVVSYNALLGGYGKQGKYDEVKRMYQDM 462

Query: 384 VGKGVEPNVVAYGILIDALGKQGKPRDALRVAR 482
               V PN++ Y  LID   K G  R+A+ V R
Sbjct: 463 KADHVSPNLLTYSTLIDVYSKGGLYREAMEVFR 495



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/158 (23%), Positives = 73/158 (46%)
 Frame = +3

Query: 6   LVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVG 185
           L++ Y    ++    K+ K+     + + + + + ++    K  K+  V+   + ++   
Sbjct: 407 LLSIYAKLGRFEEALKVCKEMESSGIVRDVVSYNALLGGYGKQGKYDEVKRMYQDMKADH 466

Query: 186 NEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKGWVLDIESYCILMSCYKKRREWRMTI 365
               +  Y+TL+  Y K G+Y +++EVFR     G   D+  Y  L++   K       +
Sbjct: 467 VSPNLLTYSTLIDVYSKGGLYREAMEVFREFKQAGLKADVVLYSELINALCKNGMVESAV 526

Query: 366 RVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDALRVA 479
            + +EM  +G+ PNV+ Y  +IDA G+      AL  A
Sbjct: 527 SLLDEMTKEGIMPNVITYNSIIDAFGRPATADSALGAA 564


>ref|XP_004236606.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Solanum lycopersicum]
          Length = 834

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/128 (31%), Positives = 66/128 (51%)
 Frame = +3

Query: 99  TVSKIMHNSVKSRKFRVVEAWLEGLEIVGNEKIVSVYNTLMRAYLKLGMYEKSIEVFRTV 278
           T + IMH    S + +  EA    +   G +  +  YNTL+ AY   GM ++++ +F  +
Sbjct: 337 TYTTIMHMYSVSGQIKNCEAVFNTMLAEGLKPNIVSYNTLVGAYASHGMAQEALSIFDKM 396

Query: 279 DSKGWVLDIESYCILMSCYKKRREWRMTIRVFEEMVGKGVEPNVVAYGILIDALGKQGKP 458
            S G   D+ SY  L++ Y +  +    +  FE M    ++PN+V+Y +LIDA G  G  
Sbjct: 397 KSNGTRPDVVSYTSLLNAYGRSEQPERAMETFERMKRNNLKPNLVSYNVLIDAYGSNGLL 456

Query: 459 RDALRVAR 482
             A++V R
Sbjct: 457 DKAVQVLR 464



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
 Frame = +3

Query: 6   LVNSYVDSRKWSFLQKLAKDPRVPLLSKKLGTVSKIMHNSVKSRKFRVVEAWLEGLEIVG 185
           L+N+   S  W    K+ K+     +   L T + ++       ++    ++ E ++   
Sbjct: 234 LINACGSSGNWREALKVCKEMTENGVGPDLMTHNIVLSAYKNGTQYAKALSYFELMKGTK 293

Query: 186 NEKIVSVYNTLMRAYLKLGMYEKSIEVFRTVDSKG--WVLDIESYCILMSCYKKRREWRM 359
                +  N ++   +KL  Y+K++E+F ++  K    + D+ +Y  +M  Y    + + 
Sbjct: 294 VRPDTTTLNIVIHCLVKLEQYQKAVEIFNSMREKRSECIPDVVTYTTIMHMYSVSGQIKN 353

Query: 360 TIRVFEEMVGKGVEPNVVAYGILIDALGKQGKPRDALRV 476
              VF  M+ +G++PN+V+Y  L+ A    G  ++AL +
Sbjct: 354 CEAVFNTMLAEGLKPNIVSYNTLVGAYASHGMAQEALSI 392