BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00016046
         (958 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002979319.1| hypothetical protein SELMODRAFT_418944 [Sela...   135   2e-29
ref|XP_002988629.1| hypothetical protein SELMODRAFT_447395 [Sela...   135   2e-29
ref|XP_001757939.1| predicted protein [Physcomitrella patens] gi...   129   2e-27
ref|XP_006837050.1| hypothetical protein AMTR_s00110p00061160 [A...   121   4e-25
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   112   2e-22
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   112   2e-22
gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus pe...   108   2e-21
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s...   106   1e-20
gb|ESW29064.1| hypothetical protein PHAVU_002G0404001g, partial ...   106   1e-20
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   104   6e-20
ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595...   103   7e-20
ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595...   103   7e-20
ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III s...   103   7e-20
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   103   7e-20
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   103   7e-20
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   103   7e-20
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5...   101   4e-19
ref|XP_003589437.1| hypothetical protein MTR_1g024320 [Medicago ...   101   4e-19
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...    96   2e-17
emb|CBI17549.3| unnamed protein product [Vitis vinifera]               96   2e-17

>ref|XP_002979319.1| hypothetical protein SELMODRAFT_418944 [Selaginella moellendorffii]
           gi|300153087|gb|EFJ19727.1| hypothetical protein
           SELMODRAFT_418944 [Selaginella moellendorffii]
          Length = 625

 Score =  135 bits (340), Expect = 2e-29
 Identities = 77/158 (48%), Positives = 105/158 (66%), Gaps = 4/158 (2%)
 Frame = +2

Query: 14  STMSQESRTSLALALREI-LSSHVCNLKEIRQSLQNLAKVKGTAGNKK--EAVKGMAAAK 184
           S+M+ E+  +L  AL +I L  HVC L+ I   L+  A  K  A N K  E    +AAAK
Sbjct: 467 SSMAPETLAALPDALTQIFLKHHVCTLQFICHCLRESAITKSQADNVKVEEKASAVAAAK 526

Query: 185 GATAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVF 364
           GA+AP+ ELT+++D +A+NINGVYFL  LG+PT D +R VV+ L++ K  G  +++ E+ 
Sbjct: 527 GASAPVAELTAIVDTIATNINGVYFLTQLGDPTQDPFREVVIALLKQKSAG--LQRSEIM 584

Query: 365 EACKLEVGD-PSPQIYSKIMKELCTSKGGGWVLKTGDG 475
           EA KL +   PS Q+Y KIMKELC ++G  WVLKTGDG
Sbjct: 585 EAFKLALRKMPSNQLYQKIMKELCYTRGATWVLKTGDG 622


>ref|XP_002988629.1| hypothetical protein SELMODRAFT_447395 [Selaginella moellendorffii]
           gi|300143736|gb|EFJ10425.1| hypothetical protein
           SELMODRAFT_447395 [Selaginella moellendorffii]
          Length = 625

 Score =  135 bits (340), Expect = 2e-29
 Identities = 77/158 (48%), Positives = 105/158 (66%), Gaps = 4/158 (2%)
 Frame = +2

Query: 14  STMSQESRTSLALALREI-LSSHVCNLKEIRQSLQNLAKVKGTAGNKK--EAVKGMAAAK 184
           S+M+ E+  +L  AL +I L  HVC L+ I   L+  A  K  A N K  E    +AAAK
Sbjct: 467 SSMAPETLAALPDALTQIFLKHHVCTLQFICHCLRESAITKSQADNVKVEEKASAVAAAK 526

Query: 185 GATAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVF 364
           GA+AP+ ELT+++D +A+NINGVYFL  LG+PT D +R VV+ L++ K  G  +++ E+ 
Sbjct: 527 GASAPVAELTAIVDTIATNINGVYFLTQLGDPTQDPFREVVIALLKQKSAG--LQRSEIM 584

Query: 365 EACKLEVGD-PSPQIYSKIMKELCTSKGGGWVLKTGDG 475
           EA KL +   PS Q+Y KIMKELC ++G  WVLKTGDG
Sbjct: 585 EAFKLALRKMPSNQLYQKIMKELCYTRGATWVLKTGDG 622


>ref|XP_001757939.1| predicted protein [Physcomitrella patens] gi|162690816|gb|EDQ77181.1|
            predicted protein [Physcomitrella patens]
          Length = 832

 Score =  129 bits (323), Expect = 2e-27
 Identities = 71/155 (45%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
 Frame = +2

Query: 17   TMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAG-NKKEAVKGMAAAKGA 190
            TMS E+R +L  AL+EI + H VC ++ I QSL+++A  +  A  N K A   +AAAK A
Sbjct: 675  TMSDETRMALPGALKEIFAKHHVCTMQIIVQSLRDMAIERTVANSNPKSAAAAVAAAKAA 734

Query: 191  TAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEA 370
             AP  ELT+ + +VA+NI GVYFL +L NP +D +R VV+ L+R  GP A +RK ++  A
Sbjct: 735  NAPASELTAAVCRVATNIGGVYFLTTLNNPALDPFREVVIALLRKMGPDAGLRKNDILLA 794

Query: 371  CKLEVGDPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
             K    +     Y K+MKELC ++G  W LK GDG
Sbjct: 795  FKSAGREAPSATYLKVMKELCYTRGAAWYLKPGDG 829


>ref|XP_006837050.1| hypothetical protein AMTR_s00110p00061160 [Amborella trichopoda]
            gi|548839643|gb|ERM99903.1| hypothetical protein
            AMTR_s00110p00061160 [Amborella trichopoda]
          Length = 763

 Score =  121 bits (303), Expect = 4e-25
 Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
 Frame = +2

Query: 14   STMSQESRTSLALALREILSS-HVCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGA 190
            S MS+E R +++ ALR++    HVC+L  +R  L++L   K         V   AAA GA
Sbjct: 605  SIMSEEVREAISDALRDVFKKYHVCSLPMLRSGLRDLGISKSVTPKAATRVAA-AAAHGA 663

Query: 191  TAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEA 370
             A   EL S +++VA NI+GVY LKSL NP +D  R VV+ L+ A  P A ++KVEV +A
Sbjct: 664  AASDAELLSHVNKVAVNIHGVYALKSLSNPLLDPLREVVISLLCASKPKAKLKKVEVMQA 723

Query: 371  CKLEVG--DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
             K++    D  P +Y +++ ELC S+ GGWVLK+GDG
Sbjct: 724  FKIKFNKEDVPPNVYKQVLTELCVSQAGGWVLKSGDG 760


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  112 bits (280), Expect = 2e-22
 Identities = 66/155 (42%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
 Frame = +2

Query: 20   MSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATA 196
            MS E+R +L  AL+++  +H VC+ + I Q L++LA  + T   K +A   +AAA G  A
Sbjct: 546  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLP-KADARMAVAAAYGVDA 604

Query: 197  PLGELTSVIDQVASNINGVYFLKSLG-NPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEAC 373
            P  EL  +I QVA+ I+G+Y L S   +P  D  R VV++L+R +GP A+++K +V EA 
Sbjct: 605  PPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEAS 664

Query: 374  KLEVGDP-SPQIYSKIMKELCTSKGGGWVLKTGDG 475
            K E+G   +   YSK+M E+C S G  W LK+GDG
Sbjct: 665  KHELGRAINSNEYSKVMNEICISHGSSWTLKSGDG 699


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  112 bits (280), Expect = 2e-22
 Identities = 66/155 (42%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
 Frame = +2

Query: 20   MSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATA 196
            MS E+R +L  AL+++  +H VC+ + I Q L++LA  + T   K +A   +AAA G  A
Sbjct: 546  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLP-KADARMAVAAAYGVDA 604

Query: 197  PLGELTSVIDQVASNINGVYFLKSLG-NPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEAC 373
            P  EL  +I QVA+ I+G+Y L S   +P  D  R VV++L+R +GP A+++K +V EA 
Sbjct: 605  PPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEAS 664

Query: 374  KLEVGDP-SPQIYSKIMKELCTSKGGGWVLKTGDG 475
            K E+G   +   YSK+M E+C S G  W LK+GDG
Sbjct: 665  KHELGRAINSNEYSKVMNEICISHGSSWTLKSGDG 699


>gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
          Length = 698

 Score =  108 bits (271), Expect = 2e-21
 Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 4/162 (2%)
 Frame = +2

Query: 2    QLDGSTMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMA- 175
            Q+ G TMS E+R +L  A++E+L  H VCN + I + L+ LA  K +        K +  
Sbjct: 534  QIGGRTMSDETRAALPEAIKEVLHEHKVCNFRLICEGLRRLAVRKSSLPKVDPKTKRVID 593

Query: 176  AAKGATAPLGELTSVIDQVASNINGVYFLKSLGNPTI-DAYRNVVVKLIRAKGPGAIIRK 352
            AA G  AP  EL  VI QVA++I+G+Y LKS    +  D  R VV+ L+  KGP A +++
Sbjct: 594  AAYGVDAPQHELQKVICQVAADIHGLYVLKSSPEHSEHDRLRKVVIDLLCTKGPNAKLKR 653

Query: 353  VEVFEACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
             EVFEA K+ +  D +   Y+K+M + C  KG  W+LK+GDG
Sbjct: 654  GEVFEAAKIALERDINTNEYNKVMNDFCVFKGSAWILKSGDG 695


>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
            max]
          Length = 697

 Score =  106 bits (264), Expect = 1e-20
 Identities = 64/158 (40%), Positives = 97/158 (61%), Gaps = 4/158 (2%)
 Frame = +2

Query: 17   TMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAKG 187
            TMS E+R +L +AL+++  +H VC+ K I + L+ +A  K   + G+ K AV    AA  
Sbjct: 545  TMSNETRHALPIALKKLFQTHKVCSFKLICEGLREMAVSKAMLSKGDSKMAVD---AAHS 601

Query: 188  ATAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFE 367
               P  EL +VI +VA  ING Y LKS  +   D +R+VV+ ++   GP A ++K E+ E
Sbjct: 602  LDGPHNELMAVISEVACEINGSYVLKSSPD---DPFRDVVIDMLCGSGPNAKLKKAEILE 658

Query: 368  ACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDGT 478
            A + ++G + +   Y+K+M ELC SKG  WVLK+GDG+
Sbjct: 659  AARRKLGREVASNEYTKVMSELCVSKGSVWVLKSGDGS 696


>gb|ESW29064.1| hypothetical protein PHAVU_002G0404001g, partial [Phaseolus
           vulgaris]
          Length = 341

 Score =  106 bits (264), Expect = 1e-20
 Identities = 64/159 (40%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
 Frame = +2

Query: 17  TMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAKG 187
           TMS E+R +L +AL+++  ++ VC+ K I Q L+ +A  K   + G+ K AV    AA  
Sbjct: 188 TMSNETRHALPIALKKLFQTNKVCSFKVICQGLREMAVSKAMLSKGDSKIAVD---AAHS 244

Query: 188 ATAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFE 367
              P  EL +VI++VA  I+G Y LKS  +   D +R+VV+ ++R  GP A ++K E+ E
Sbjct: 245 LDGPHNELMAVINEVACEIHGYYVLKSSQD---DPFRDVVIDMLRGSGPNAKLKKAEIVE 301

Query: 368 ACKLEVGDPSPQI-YSKIMKELCTSKGGGWVLKTGDGTD 481
           A + ++G   P   Y+K+M ELC SKG  WVL++GDG++
Sbjct: 302 AARRKLGREVPNNEYNKVMSELCVSKGSVWVLRSGDGSN 340


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
           gi|550334731|gb|EEE90658.2| hypothetical protein
           POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  104 bits (259), Expect = 6e-20
 Identities = 71/159 (44%), Positives = 95/159 (59%), Gaps = 6/159 (3%)
 Frame = +2

Query: 17  TMSQESRTSLALALREILSSH-VCN--LKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKG 187
           TM+ E+R +L  AL ++L +H VC    + I Q L+ LA  + T       +  +AAA G
Sbjct: 507 TMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQSTLPKADPRI-AVAAASG 565

Query: 188 ATAPLGELTSVIDQVASNINGVYFLKSLG-NPTIDAY-RNVVVKLIRAKGPGAIIRKVEV 361
           A AP  EL  VI +VA+NI+G Y LKS   +P  D   R VV+ L  A+GP A I+K EV
Sbjct: 566 AEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNANIKKSEV 625

Query: 362 FEACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
             A +LE+  +PS   Y K+M +LC SKG  WVLK+GDG
Sbjct: 626 QAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGDG 664


>ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595101 isoform X4 [Solanum
           tuberosum] gi|565401172|ref|XP_006366086.1| PREDICTED:
           uncharacterized protein LOC102595101 isoform X5 [Solanum
           tuberosum] gi|565401174|ref|XP_006366087.1| PREDICTED:
           uncharacterized protein LOC102595101 isoform X6 [Solanum
           tuberosum]
          Length = 387

 Score =  103 bits (258), Expect = 7e-20
 Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
 Frame = +2

Query: 14  STMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAK 184
           ++MS+E R +L  AL+E+  ++ VC+ ++IRQ L+ L   K     G  ++A+   A+  
Sbjct: 228 TSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAIT--ASID 285

Query: 185 GATAPLGELTSVIDQVASNINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEV 361
              AP  E+ +VI+QVA NI+GVY LKS   NP  D  R VV+ L  A+GP A ++K  V
Sbjct: 286 VFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASV 345

Query: 362 FEACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
            EA KL++  D +   + K+MKELC S+   WVL++GDG
Sbjct: 346 TEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 384


>ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595101 isoform X1 [Solanum
           tuberosum] gi|565401166|ref|XP_006366083.1| PREDICTED:
           uncharacterized protein LOC102595101 isoform X2 [Solanum
           tuberosum] gi|565401168|ref|XP_006366084.1| PREDICTED:
           uncharacterized protein LOC102595101 isoform X3 [Solanum
           tuberosum]
          Length = 426

 Score =  103 bits (258), Expect = 7e-20
 Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
 Frame = +2

Query: 14  STMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAK 184
           ++MS+E R +L  AL+E+  ++ VC+ ++IRQ L+ L   K     G  ++A+   A+  
Sbjct: 267 TSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAIT--ASID 324

Query: 185 GATAPLGELTSVIDQVASNINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEV 361
              AP  E+ +VI+QVA NI+GVY LKS   NP  D  R VV+ L  A+GP A ++K  V
Sbjct: 325 VFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASV 384

Query: 362 FEACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
            EA KL++  D +   + K+MKELC S+   WVL++GDG
Sbjct: 385 TEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 423


>ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X3 [Solanum tuberosum]
          Length = 577

 Score =  103 bits (258), Expect = 7e-20
 Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
 Frame = +2

Query: 14  STMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAK 184
           ++MS+E R +L  AL+E+  ++ VC+ ++IRQ L+ L   K     G  ++A+   A+  
Sbjct: 418 TSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAIT--ASID 475

Query: 185 GATAPLGELTSVIDQVASNINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEV 361
              AP  E+ +VI+QVA NI+GVY LKS   NP  D  R VV+ L  A+GP A ++K  V
Sbjct: 476 VFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASV 535

Query: 362 FEACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
            EA KL++  D +   + K+MKELC S+   WVL++GDG
Sbjct: 536 TEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 574


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X2 [Solanum tuberosum]
          Length = 657

 Score =  103 bits (258), Expect = 7e-20
 Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
 Frame = +2

Query: 14  STMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAK 184
           ++MS+E R +L  AL+E+  ++ VC+ ++IRQ L+ L   K     G  ++A+   A+  
Sbjct: 498 TSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAIT--ASID 555

Query: 185 GATAPLGELTSVIDQVASNINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEV 361
              AP  E+ +VI+QVA NI+GVY LKS   NP  D  R VV+ L  A+GP A ++K  V
Sbjct: 556 VFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASV 615

Query: 362 FEACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
            EA KL++  D +   + K+MKELC S+   WVL++GDG
Sbjct: 616 TEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 654


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X1 [Solanum tuberosum]
          Length = 669

 Score =  103 bits (258), Expect = 7e-20
 Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
 Frame = +2

Query: 14  STMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAK 184
           ++MS+E R +L  AL+E+  ++ VC+ ++IRQ L+ L   K     G  ++A+   A+  
Sbjct: 510 TSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAIT--ASID 567

Query: 185 GATAPLGELTSVIDQVASNINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEV 361
              AP  E+ +VI+QVA NI+GVY LKS   NP  D  R VV+ L  A+GP A ++K  V
Sbjct: 568 VFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASV 627

Query: 362 FEACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
            EA KL++  D +   + K+MKELC S+   WVL++GDG
Sbjct: 628 TEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Solanum lycopersicum]
          Length = 669

 Score =  103 bits (258), Expect = 7e-20
 Identities = 65/159 (40%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
 Frame = +2

Query: 14  STMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAK 184
           ++MS+E R +L  AL+E+  ++ VC+ ++IRQ L+ L   K     G  ++A+   A+  
Sbjct: 510 TSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAIT--ASVD 567

Query: 185 GATAPLGELTSVIDQVASNINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEV 361
              AP  E+ +VI+QVA NI+GVY LKS   NP  D  R +V+ L  A+GP A ++K  V
Sbjct: 568 VFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASV 627

Query: 362 FEACKLEVG-DPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
            EA KL++  D +   + K+MKELC S+   WVL++GDG
Sbjct: 628 TEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666


>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
           gi|358344405|ref|XP_003636280.1| DNA-directed RNA
           polymerase III subunit RPC5 [Medicago truncatula]
           gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
           III subunit RPC5 [Medicago truncatula]
           gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
           III subunit RPC5 [Medicago truncatula]
          Length = 683

 Score =  101 bits (252), Expect = 4e-19
 Identities = 60/156 (38%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
 Frame = +2

Query: 17  TMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGAT 193
           TMS E+R +L +AL+++  +H VC+ + I Q L+ LA  + T   K  +   + AA    
Sbjct: 530 TMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQ-TMLPKGGSKMSVDAANSLD 588

Query: 194 APLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEAC 373
            P  EL +++ +VA +I+G Y LKS  N   D +R+VV+ ++R  GP   ++K E+ EA 
Sbjct: 589 VPQDELKAILGEVACDIHGCYVLKSAQN---DPFRDVVIDMLRGSGPNGKLKKAEILEAA 645

Query: 374 KLEVGDPSPQI-YSKIMKELCTSKGGGWVLKTGDGT 478
           + ++G   P   Y K + ELC SKG  WVLK+GDG+
Sbjct: 646 RRKLGRDVPNNEYIKAVSELCVSKGSFWVLKSGDGS 681


>ref|XP_003589437.1| hypothetical protein MTR_1g024320 [Medicago truncatula]
           gi|355478485|gb|AES59688.1| hypothetical protein
           MTR_1g024320 [Medicago truncatula]
          Length = 406

 Score =  101 bits (252), Expect = 4e-19
 Identities = 60/156 (38%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
 Frame = +2

Query: 17  TMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGAT 193
           TMS E+R +L +AL+++  +H VC+ + I Q L+ LA  + T   K  +   + AA    
Sbjct: 253 TMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQ-TMLPKGGSKMSVDAANSLD 311

Query: 194 APLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEAC 373
            P  EL +++ +VA +I+G Y LKS  N   D +R+VV+ ++R  GP   ++K E+ EA 
Sbjct: 312 VPQDELKAILGEVACDIHGCYVLKSAQN---DPFRDVVIDMLRGSGPNGKLKKAEILEAA 368

Query: 374 KLEVGDPSPQI-YSKIMKELCTSKGGGWVLKTGDGT 478
           + ++G   P   Y K + ELC SKG  WVLK+GDG+
Sbjct: 369 RRKLGRDVPNNEYIKAVSELCVSKGSFWVLKSGDGS 404


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
           vinifera]
          Length = 672

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 59/156 (37%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
 Frame = +2

Query: 14  STMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGA 190
           + MS E+R +L  AL E+   H VC+ + I Q+L++LA  K T+  K +    +AAA GA
Sbjct: 515 TAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSP-KVDPRTFVAAAYGA 573

Query: 191 TAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEA 370
            AP  EL ++I + A+ ++GVY  K+  +   +  R VVV L   K P A +++ ++ EA
Sbjct: 574 DAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEA 633

Query: 371 CKLEV-GDPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
            K+ +  + +   Y+K++ ELC S+G  WVLK+GDG
Sbjct: 634 AKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDG 669


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 59/156 (37%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
 Frame = +2

Query: 14  STMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGA 190
           + MS E+R +L  AL E+   H VC+ + I Q+L++LA  K T+  K +    +AAA GA
Sbjct: 531 TAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSP-KVDPRTFVAAAYGA 589

Query: 191 TAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEA 370
            AP  EL ++I + A+ ++GVY  K+  +   +  R VVV L   K P A +++ ++ EA
Sbjct: 590 DAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEA 649

Query: 371 CKLEV-GDPSPQIYSKIMKELCTSKGGGWVLKTGDG 475
            K+ +  + +   Y+K++ ELC S+G  WVLK+GDG
Sbjct: 650 AKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDG 685