BLASTX nr result
ID: Ephedra26_contig00015909
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00015909
(478 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16767.1| unknown [Picea sitchensis] 100 2e-19
ref|XP_001764547.1| predicted protein [Physcomitrella patens] gi... 97 3e-18
ref|XP_006833347.1| hypothetical protein AMTR_s00109p00088820 [A... 91 1e-16
ref|XP_002514277.1| conserved hypothetical protein [Ricinus comm... 82 1e-13
ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|5... 80 4e-13
ref|XP_002325001.1| RNA-binding family protein [Populus trichoca... 77 2e-12
ref|XP_002970059.1| hypothetical protein SELMODRAFT_440984 [Sela... 74 2e-11
ref|XP_002985251.1| hypothetical protein SELMODRAFT_446169 [Sela... 74 2e-11
ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250... 72 1e-10
ref|XP_004965466.1| PREDICTED: basic proline-rich protein-like [... 70 3e-10
ref|XP_004287394.1| PREDICTED: uncharacterized protein LOC101293... 70 4e-10
gb|EMJ03294.1| hypothetical protein PRUPE_ppa007541mg [Prunus pe... 69 5e-10
gb|EMS47131.1| TATA-binding protein-associated factor 2N [Tritic... 68 1e-09
ref|XP_003563841.1| PREDICTED: uncharacterized protein LOC100846... 68 1e-09
ref|XP_006475651.1| PREDICTED: cleavage and polyadenylation spec... 67 2e-09
ref|XP_006451191.1| hypothetical protein CICLE_v10008655mg [Citr... 67 2e-09
gb|EOY30745.1| RNA-binding protein-related [Theobroma cacao] 67 2e-09
emb|CBI28047.3| unnamed protein product [Vitis vinifera] 67 2e-09
gb|EEC72901.1| hypothetical protein OsI_06726 [Oryza sativa Indi... 67 2e-09
dbj|BAG97338.1| unnamed protein product [Oryza sativa Japonica G... 67 2e-09
>gb|ABR16767.1| unknown [Picea sitchensis]
Length = 426
Score = 100 bits (250), Expect = 2e-19
Identities = 61/154 (39%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPHSXXXXXXX 297
EGDWIC ES CGN+NFA+R CN+CNKPRR+MAPF G+G P H
Sbjct: 209 EGDWICPESACGNINFAKRQQCNSCNKPRRNMAPFGMGIGGHEAGVQVPRSHPRFMGGPP 268
Query: 296 XXXXXXXXXXGFVEPTTDWGRGSPLEFDQGPPFRPIDRF-SDMRPGRPIRDRAXXXXXXX 120
GF P WGRG P FD+ P RP ++ D RP R RDR
Sbjct: 269 MGRGMGRGRSGFGRPPAPWGRGGPGAFDRISPPRPGEQSPPDFRPVRDTRDRHDYEDRFD 328
Query: 119 XXXXXXXXXXXPVDWAFYPRVRN--REDRFHVKR 24
PVD R+ REDR+H +R
Sbjct: 329 YRGRVRDDSFAPVDRPPMMGHRDGIREDRYHDRR 362
>ref|XP_001764547.1| predicted protein [Physcomitrella patens]
gi|162684125|gb|EDQ70529.1| predicted protein
[Physcomitrella patens]
Length = 823
Score = 96.7 bits (239), Expect = 3e-18
Identities = 56/116 (48%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVG---NRPGFQGPPMPHSXXXX 306
EGDWICSE TCGNLNFARR+HCNNCNKPRRD+ V ++ GF GPP
Sbjct: 602 EGDWICSEPTCGNLNFARRTHCNNCNKPRRDIGELGIRVNGGFSQGGFGGPPHA-PFMGG 660
Query: 305 XXXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG--PPFRPIDRFSDMRPGRPIRDR 144
G EP WGRG +FD G PP DR SD R R +RDR
Sbjct: 661 PVIGGRELPRGFSGHGEPPGPWGRGRSSDFDHGSLPPIS--DRMSDFRSVRDMRDR 714
>ref|XP_006833347.1| hypothetical protein AMTR_s00109p00088820 [Amborella trichopoda]
gi|548838023|gb|ERM98625.1| hypothetical protein
AMTR_s00109p00088820 [Amborella trichopoda]
Length = 410
Score = 91.3 bits (225), Expect = 1e-16
Identities = 61/165 (36%), Positives = 72/165 (43%), Gaps = 7/165 (4%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRP--GFQGPPMPHSXXXXX 303
EGDWICSE +CGNLNFARR++CNNCNK RRDMAPF + P + GPP PH
Sbjct: 185 EGDWICSEPSCGNLNFARRAYCNNCNKLRRDMAPFRPPGPHSPRGPYPGPPPPHGPPRMG 244
Query: 302 XXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG-PPFRPIDRFSDMRPGRPIRDRA----X 138
+ G P + G PP R RFSD R GR R+R
Sbjct: 245 GPPLDRGLPPRSMNGYESPPRGGYGPRGYGSGPPPPRHGGRFSDPRMGREARERERPGFH 304
Query: 137 XXXXXXXXXXXXXXXXXPVDWAFYPRVRNREDRFHVKRPVLYDPR 3
+W PR R R+D F +R D R
Sbjct: 305 QEEIEFREREKFGRPLPHQEWGNGPRERERDDFFAERRGPYNDAR 349
>ref|XP_002514277.1| conserved hypothetical protein [Ricinus communis]
gi|223546733|gb|EEF48231.1| conserved hypothetical
protein [Ricinus communis]
Length = 346
Score = 81.6 bits (200), Expect = 1e-13
Identities = 48/112 (42%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPH-SXXXXXX 300
EGDWICS+ C NLNFARR +CNNC +PR + G R G+ GPP PH
Sbjct: 159 EGDWICSDPLCNNLNFARREYCNNCKRPR-----YGPGGSPRRGYPGPPHPHPPRRFPGP 213
Query: 299 XXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG--PPFRPIDRFS--DMRPGRP 156
GF P W R P +F G PP R RFS D+R GRP
Sbjct: 214 PLDISPGRTMNGFRSPPRGWARDGPRDFGPGGPPPPRHGGRFSDHDIRRGRP 265
>ref|XP_002331165.1| predicted protein [Populus trichocarpa]
gi|566176721|ref|XP_006381723.1| RNA-binding family
protein [Populus trichocarpa]
gi|550336476|gb|ERP59520.1| RNA-binding family protein
[Populus trichocarpa]
Length = 333
Score = 79.7 bits (195), Expect = 4e-13
Identities = 44/105 (41%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPHS--XXXXX 303
EGDWICS+ CGNLNFARR +CNNC +PR + G R G+ GPP PH+
Sbjct: 122 EGDWICSDPLCGNLNFARREYCNNCKRPR-----YRPGGSPRRGYPGPPPPHAPPRRFPG 176
Query: 302 XXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG--PPFRPIDRFSD 174
G+ P W R P +F G PP R RFSD
Sbjct: 177 PPLDLSPGRTMNGYRSPPRGWSRDGPRDFGPGGPPPPRQGGRFSD 221
>ref|XP_002325001.1| RNA-binding family protein [Populus trichocarpa]
gi|222866435|gb|EEF03566.1| RNA-binding family protein
[Populus trichocarpa]
Length = 333
Score = 77.0 bits (188), Expect = 2e-12
Identities = 45/115 (39%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPHS--XXXXX 303
EGDWIC++ CGNLNFARR CNNC +PR + +G R G+ GPP H+
Sbjct: 126 EGDWICTDPLCGNLNFARRDFCNNCKRPR-----YRSGGSPRRGYPGPPPLHAPPRHFPG 180
Query: 302 XXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQ-GPPFRPIDRFSDMRPGRPIRDRA 141
G+ P DW R P ++ GPP R RFSD R D A
Sbjct: 181 LSLDLSPGRTMNGYRSPPRDWARDRPRDYGSGGPPPRQGGRFSDQDMRRDRSDYA 235
>ref|XP_002970059.1| hypothetical protein SELMODRAFT_440984 [Selaginella moellendorffii]
gi|300162570|gb|EFJ29183.1| hypothetical protein
SELMODRAFT_440984 [Selaginella moellendorffii]
Length = 447
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGN-----RPGFQGPP 330
EGDWIC+E TCGNLNFARR+ CNNC++PRRDM+PF N P GPP
Sbjct: 207 EGDWICTEPTCGNLNFARRTACNNCSRPRRDMSPFRMDPPNFRPLPPPFLDGPP 260
>ref|XP_002985251.1| hypothetical protein SELMODRAFT_446169 [Selaginella moellendorffii]
gi|300147079|gb|EFJ13745.1| hypothetical protein
SELMODRAFT_446169 [Selaginella moellendorffii]
Length = 549
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGN-----RPGFQGPP 330
EGDWIC+E TCGNLNFARR+ CNNC++PRRDM+PF N P GPP
Sbjct: 233 EGDWICTEPTCGNLNFARRTACNNCSRPRRDMSPFRMDPPNFRPLPPPFLDGPP 286
>ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250827 [Vitis vinifera]
Length = 360
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/94 (40%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPH--SXXXXX 303
EGDW+C + CGNLNFARR CNNCN+ R G R GF GPP PH
Sbjct: 150 EGDWVCPDPLCGNLNFARREQCNNCNRYRE-----GPGESPRRGFPGPPPPHPPPRRFSG 204
Query: 302 XXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQGPP 201
G+ P W R P EF G P
Sbjct: 205 PPMDRSPGRTMNGYRSPPRGWARDGPREFGGGAP 238
>ref|XP_004965466.1| PREDICTED: basic proline-rich protein-like [Setaria italica]
Length = 486
Score = 70.1 bits (170), Expect = 3e-10
Identities = 46/127 (36%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRP------GFQGPPMPHSX 315
EGDWIC CGNLNFARR+HCNNCNK R +SA P G+ PP
Sbjct: 250 EGDWICQNPNCGNLNFARRTHCNNCNKFR-----YSAREAYEPRRSPPRGYPSPPPRGPP 304
Query: 314 XXXXXXXXXXXXXXXXGFVEPTTDWGRGSPLEF-DQGPPFRPIDRFSDMRP--------G 162
+ P WG G + + PP RP+ RF+D P
Sbjct: 305 RMVGPPGDRAPPREMARYRSPPHGWGAGESRGYAARSPPERPV-RFTDASPKERMGFRGE 363
Query: 161 RPIRDRA 141
R +RDRA
Sbjct: 364 RDLRDRA 370
>ref|XP_004287394.1| PREDICTED: uncharacterized protein LOC101293710 [Fragaria vesca
subsp. vesca]
Length = 367
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/106 (41%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRP--GFQGPPMPHS--XXX 309
EGDWICS+ CGNLNFARR CN+C+K F G P G+ GPP P S
Sbjct: 158 EGDWICSDPLCGNLNFARRDQCNSCHK-------FRDGPRGSPRRGYPGPPPPISPPRRF 210
Query: 308 XXXXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG-PPFRPIDRFSD 174
G+ P W R P EF G PP R DRF D
Sbjct: 211 PGPPIDPPHGRHLNGYRSPPRGWARDGPREFGAGLPPPRHEDRFPD 256
>gb|EMJ03294.1| hypothetical protein PRUPE_ppa007541mg [Prunus persica]
Length = 364
Score = 69.3 bits (168), Expect = 5e-10
Identities = 41/104 (39%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = -3
Query: 473 GDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPHS---XXXXX 303
GDWIC + CGNLNFARR +CNNCNK R + G R G+ GPP P
Sbjct: 155 GDWICPDPLCGNLNFARREYCNNCNKFR-----YGPGGSPRRGYPGPPPPGGPPRRFPGP 209
Query: 302 XXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG-PPFRPIDRFSD 174
G+ P W R P +F G PP R RF D
Sbjct: 210 PVDPPLGRSLNGGYRSPPRGWARDGPRDFGAGMPPPRHEGRFPD 253
>gb|EMS47131.1| TATA-binding protein-associated factor 2N [Triticum urartu]
Length = 332
Score = 68.2 bits (165), Expect = 1e-09
Identities = 39/101 (38%), Positives = 46/101 (45%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPHSXXXXXXX 297
EGDWIC +CGNLNFARRSHCNNCNK R + S+ +R F PP +
Sbjct: 106 EGDWICQNPSCGNLNFARRSHCNNCNKHRYE----SSLSPHRGYFDSPPRVPARPLGQPS 161
Query: 296 XXXXXXXXXXGFVEPTTDWGRGSPLEFDQGPPFRPIDRFSD 174
P DWG G P + P + RF D
Sbjct: 162 DRAPPREMARYKPAP-RDWGVGDPRSYPARSPPERVGRFPD 201
>ref|XP_003563841.1| PREDICTED: uncharacterized protein LOC100846488 [Brachypodium
distachyon]
Length = 465
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/101 (37%), Positives = 47/101 (46%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPHSXXXXXXX 297
EGDWIC +CGNLNFARRSHCNNC+K R + S+ +R F P P
Sbjct: 238 EGDWICQNPSCGNLNFARRSHCNNCDKHRYE----SSRSPHRGYFDSP--PRVPQRSLGP 291
Query: 296 XXXXXXXXXXGFVEPTTDWGRGSPLEFDQGPPFRPIDRFSD 174
+ P DWG P ++ P + RFSD
Sbjct: 292 SDCGPPRDMARYRPPPRDWGVSDPRDYAGRSPPDRVGRFSD 332
>ref|XP_006475651.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform X2 [Citrus sinensis]
Length = 299
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/105 (38%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQG--PPMPHSXXXXX 303
EGDWIC + C NLNFARR +CNNC + R ++ G R G+ G PP P
Sbjct: 92 EGDWICPDPLCANLNFARREYCNNCKRFR-----YAPGGSPRRGYPGPPPPPPPPRRFPG 146
Query: 302 XXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG--PPFRPIDRFSD 174
G+ P W R P +F G PP R RFSD
Sbjct: 147 PPIAISPGRTVNGYRSPPRGWARDGPRDFGPGVLPPPRHEGRFSD 191
>ref|XP_006451191.1| hypothetical protein CICLE_v10008655mg [Citrus clementina]
gi|568843512|ref|XP_006475650.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
isoform X1 [Citrus sinensis] gi|557554417|gb|ESR64431.1|
hypothetical protein CICLE_v10008655mg [Citrus
clementina]
Length = 361
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/105 (38%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQG--PPMPHSXXXXX 303
EGDWIC + C NLNFARR +CNNC + R ++ G R G+ G PP P
Sbjct: 154 EGDWICPDPLCANLNFARREYCNNCKRFR-----YAPGGSPRRGYPGPPPPPPPPRRFPG 208
Query: 302 XXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG--PPFRPIDRFSD 174
G+ P W R P +F G PP R RFSD
Sbjct: 209 PPIAISPGRTVNGYRSPPRGWARDGPRDFGPGVLPPPRHEGRFSD 253
>gb|EOY30745.1| RNA-binding protein-related [Theobroma cacao]
Length = 373
Score = 67.0 bits (162), Expect = 2e-09
Identities = 43/107 (40%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGN-RPGFQGPPMPHS---XXX 309
EGDW+C + C NLNFARR +CNNC + R A VG+ R G+ GPP H+
Sbjct: 161 EGDWVCPDPLCRNLNFARREYCNNCRRFR------YAPVGSPRGGYPGPPPSHAPPRRFP 214
Query: 308 XXXXXXXXXXXXXXGFVEPTTDWGRGSPLEFDQG--PPFRPIDRFSD 174
GF P W R P EF G PP R RFSD
Sbjct: 215 GSPMDLSPPGRNMNGFRSPPRGWAREGPREFGAGGPPPPRHEGRFSD 261
>emb|CBI28047.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVGNRPGFQGPPMPH 321
EGDW+C + CGNLNFARR CNNCN+ R G R GF GPP PH
Sbjct: 250 EGDWVCPDPLCGNLNFARREQCNNCNRYRE-----GPGESPRRGFPGPPPPH 296
>gb|EEC72901.1| hypothetical protein OsI_06726 [Oryza sativa Indica Group]
gi|222622590|gb|EEE56722.1| hypothetical protein
OsJ_06225 [Oryza sativa Japonica Group]
Length = 342
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/50 (60%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVG-NRPGFQGPP 330
EGDWIC TCGNLNFARRSHCNNCNK R A + + +R F PP
Sbjct: 89 EGDWICQNPTCGNLNFARRSHCNNCNKERYAPAMYKSSYSPDRRQFNSPP 138
>dbj|BAG97338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 343
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/50 (60%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -3
Query: 476 EGDWICSESTCGNLNFARRSHCNNCNKPRRDMAPFSAGVG-NRPGFQGPP 330
EGDWIC TCGNLNFARRSHCNNCNK R A + + +R F PP
Sbjct: 90 EGDWICQNPTCGNLNFARRSHCNNCNKERYAPAMYKSSYSPDRRQFNSPP 139