BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00015866
         (4668 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A...  2006   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...  1971   0.0  
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su...  1959   0.0  
ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II su...  1957   0.0  
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...  1956   0.0  
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su...  1955   0.0  
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun...  1949   0.0  
gb|AFW57310.1| RNA polymerase II large subunit family protein [Z...  1949   0.0  
gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indi...  1948   0.0  
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S...  1948   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...  1947   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...  1947   0.0  
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun...  1947   0.0  
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su...  1941   0.0  
gb|EMT20712.1| DNA-directed RNA polymerase II subunit RPB1 [Aegi...  1941   0.0  
gb|EMS50869.1| DNA-directed RNA polymerase II subunit RPB1 [Trit...  1941   0.0  
dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]   1941   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...  1940   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...  1938   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...  1938   0.0  

>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
            gi|548833823|gb|ERM96260.1| hypothetical protein
            AMTR_s00001p00152770 [Amborella trichopoda]
          Length = 1844

 Score = 2006 bits (5197), Expect = 0.0
 Identities = 973/1115 (87%), Positives = 1050/1115 (94%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            R MSV +I+HSE  + GKP+  GLSDPRLGTIDRK+KC++C A MAECPGHFGHLELAKP
Sbjct: 29   RNMSVVEIQHSETMERGKPKPSGLSDPRLGTIDRKMKCDTCTANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGFLKTVLSI+RCVCFNCSRILADEEDHRFKQA+K++NPK RLK+VLDCCKNKTKCE
Sbjct: 89   MFHIGFLKTVLSIMRCVCFNCSRILADEEDHRFKQALKIRNPKTRLKKVLDCCKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I           VKKK HGGCG+QQPKITI+GMK++AEY+ PRKK DEQ+Q++PEP
Sbjct: 149  GGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKITIEGMKMVAEYKLPRKKNDEQEQMLPEP 208

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQQL AE+VLN+LKRI+DE+CQ+LG +P++ARPDWMILQV+        PSVMM+++
Sbjct: 209  VERKQQLAAEKVLNVLKRITDEDCQLLGLNPKYARPDWMILQVMPIPPPPVRPSVMMDTS 268

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAM+IRHNE LK+QEKNGAPAHI++EFAQLLQFHVATYFDNELPGQPRAT
Sbjct: 269  SRSEDDLTHQLAMVIRHNENLKRQEKNGAPAHIISEFAQLLQFHVATYFDNELPGQPRAT 328

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNLT
Sbjct: 329  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 388

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLK+S DHHLELGYKV
Sbjct: 389  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSGDHHLELGYKV 448

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 449  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 508

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW
Sbjct: 509  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 568

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGKIPAP I KPRP+WTGKQVFNLIIPKQINLIRYSAWH+ESE GF+T GDT VRI
Sbjct: 569  WEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRYSAWHSESESGFITPGDTCVRI 628

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            E+GE+L GTLCKKTLG+SSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQ FS+GIG
Sbjct: 629  ERGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIG 688

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETIS AK +V++LI+ AQEK+LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 689  DTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 748

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GFN RTLPHF
Sbjct: 749  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFNDRTLPHF 808

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 809  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 868

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKR EF++ YKYE DQ++WS
Sbjct: 869  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRAEFENVYKYEIDQENWS 928

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P+YMLP ++EDLK+IREFQNVF+AEVQKLEADR QLG EI  +GDNSWP+PVNLKRLIWN
Sbjct: 929  PSYMLPEHVEDLKTIREFQNVFDAEVQKLEADRHQLGTEITTTGDNSWPMPVNLKRLIWN 988

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK+FK+D RRPSDMHPMEIVEAVDKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 989  AQKMFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSIEAQKNATLFFNILLRSTF 1048

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LT+EAF+W++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1049 ASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1108

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1109 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1143


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score = 1971 bits (5107), Expect = 0.0
 Identities = 964/1115 (86%), Positives = 1042/1115 (93%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEHSE  + GKP+ GGLSDPRLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADEEDH+FKQA K++NPK+RLK++LD CKNK+KCE
Sbjct: 89   MFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQKIRNPKNRLKKILDACKNKSKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I             KK  GGCG+QQPK+TI+GMK+IAEY+  RKK D+ +QL PEP
Sbjct: 149  GGDEIETQALDSDEPV--KKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKNDDPEQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQQL+AERVLN+LKRISDE+C +LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQQLSAERVLNVLKRISDEDCILLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI++EFAQLLQFHVATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLK+SSDHHLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGKIPAP I KPRP+WTGKQVFNLIIPKQINL+R SAWH+ESE GF+T GDTQVRI
Sbjct: 566  WEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIG
Sbjct: 626  EKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETIS AK +V++LI  AQE++LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKMK+ EFD  +KYE D ++W+
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWN 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P+YMLP ++EDLK+IREF+NVF+AEVQKLEADR QLG EIA +GDNSWP+PVNLKRLIWN
Sbjct: 926  PSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FK+D RRPSDMHPMEIVEAVDKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LT+EAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140


>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
            X1 [Setaria italica]
          Length = 1852

 Score = 1959 bits (5076), Expect = 0.0
 Identities = 955/1115 (85%), Positives = 1039/1115 (93%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH+E  + GKP+ GGLSDPRLGTIDRK+KCE+C AGMAECPGHFGHLELAKP
Sbjct: 29   RQMSVIQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADE+D +FKQA+K++NPK+RLKR+ D CK+K  C 
Sbjct: 89   MFHIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNPKNRLKRIYDACKSKKVCA 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD +           VKK+  GGCG+QQP IT+DGMK++AE++AP+KK D+QDQL PEP
Sbjct: 149  GGDDLDVQEQQDTDEPVKKR--GGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVLN+LKRISDE+C +LG +P+FARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI+TEFAQLLQFH+ATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINID+LGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNTLMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            W++FDGKIPAP I KPRPIWTGKQVFNLIIPKQINLIR+SAWH+E+E GF+T GDT VRI
Sbjct: 566  WQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSETETGFITPGDTMVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKK+LG+ SGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFS+GIG
Sbjct: 626  EKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETIS AK +V++LI++AQ+K LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADAATMEKINETISKAKNEVKELIKQAQDKHLEAEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD+ ++YE D ++W 
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWR 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            PNYMLP +++DLK+IREF+NVF AEVQKLEADR QLG EI  +GDNSWP+PVNLKRLIWN
Sbjct: 926  PNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGTEITTTGDNSWPMPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEA+DKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LTKEAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140


>ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
            X2 [Setaria italica]
          Length = 1852

 Score = 1957 bits (5071), Expect = 0.0
 Identities = 954/1115 (85%), Positives = 1038/1115 (93%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH+E  + GKP+ GGLSDPRLGTIDRK+KCE+C AGMAECPGHFGHLELAKP
Sbjct: 29   RQMSVIQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADE+D +FKQA+K++NPK+RLKR+ D CK+K  C 
Sbjct: 89   MFHIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNPKNRLKRIYDACKSKKVCA 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD +           VKK+  GGCG+QQP IT+DGMK++AE++AP+KK D+QDQL PEP
Sbjct: 149  GGDDLDVQEQQDTDEPVKKR--GGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVLN+LKRISDE+C +LG +P+FARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI+TEFAQLLQFH+ATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINID+LGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HL+LGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLDLGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            W++FDGKIPAP I KPRPIWTGKQVFNLIIPKQINLIR+SAWH+E+E GF+T GDT VRI
Sbjct: 566  WQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSETETGFITPGDTMVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKK+LG+ SGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFS+GIG
Sbjct: 626  EKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETIS AK +V++LI++A E  LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADAATMEKINETISKAKNEVKELIKQAHENHLEAEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD+ ++YE D ++W 
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWR 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            PNYMLP +++DLK+IREF+NVF AEVQKLEADR QLG EI  +GDNSWP+PVNLKRLIWN
Sbjct: 926  PNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGTEITTTGDNSWPMPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEA+DKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LTKEAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
            brachyantha]
          Length = 1855

 Score = 1956 bits (5067), Expect = 0.0
 Identities = 953/1115 (85%), Positives = 1038/1115 (93%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH+E  + GKP+ GGLSDPRLGTIDRK+KCE+C AGMAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADE+D +FKQA+K++NPK+RLKR+ D CK+K  C 
Sbjct: 89   MFHIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNPKNRLKRIYDACKSKKVCA 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD +           VK++  GGCG+QQP IT+DGMK++AE++AP+KK D+Q+QL PEP
Sbjct: 149  GGDDLDVQEQQDTDEPVKRR--GGCGAQQPNITVDGMKMVAEFKAPKKKNDDQEQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVLN+LKRISDE+C +LG +P+FARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI+TEFAQLLQFH+ATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINID+LGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I KPRPIWTGKQVFNLIIPK INLIR+SAWH+E+E GF+T GDT VRI
Sbjct: 566  WEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETIS AK +V++LI++A +K LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADAATMEKINETISTAKNEVKELIKQAHDKHLEAEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD  ++YE D ++W 
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDTVFRYELDDENWR 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            PNYMLP ++EDLK+IREF+NVF AEVQKLEADR QLG EIA +GDN+WP+PVNLKRLIWN
Sbjct: 926  PNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEA+DKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LTKEAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140


>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
            vesca subsp. vesca]
          Length = 1842

 Score = 1955 bits (5064), Expect = 0.0
 Identities = 957/1115 (85%), Positives = 1034/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEHSE    GKP+T GLSDPRLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEHSETMLGGKPKTAGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+IL DE+DH+FK A+++KNPK+RLK++LD CKNKTKCE
Sbjct: 89   MFHIGFMKTVLSIMRCVCFNCSKILVDEDDHKFKTALRIKNPKNRLKKILDACKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I             KK  GGCG+QQPK+TIDGMK++AEY+A RKK+D+Q+QL PEP
Sbjct: 149  GGDEIDVQDTDEPL----KKSRGGCGAQQPKLTIDGMKMVAEYKAQRKKSDDQEQL-PEP 203

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ LTAERVL++LKRISDE+CQ+LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 204  VERKQTLTAERVLSVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPQPVRPSVMMDTS 263

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NG+PAHI++EFAQLLQFH+ATYFDNELPG PRAT
Sbjct: 264  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 323

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT
Sbjct: 324  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 383

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSDHHLELGYKV
Sbjct: 384  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 443

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 444  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 503

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW
Sbjct: 504  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 563

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I KPRP+WTGKQVFNLIIPKQINL R SAWH+ESE G +T GDT VRI
Sbjct: 564  WEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSESETGNITPGDTHVRI 623

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKK LG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ  FS+GIG
Sbjct: 624  EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 683

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETIS AK +V++LI KAQ K LE EPGRTMM+SFEN+VNQVLN+ARD
Sbjct: 684  DTIADAATMEKINETISKAKNEVKELISKAQSKSLEPEPGRTMMDSFENKVNQVLNRARD 743

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGF  RTLPHF
Sbjct: 744  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 803

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 804  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 863

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+KEFD T+ Y FD ++W+
Sbjct: 864  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFDKTFAYVFDDENWN 923

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P+YMLP ++EDLK+IREF+NVF+AEV KLE DR QLG EIA +GDNSWPLPVNLKRLIWN
Sbjct: 924  PDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQLGTEIAVTGDNSWPLPVNLKRLIWN 983

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RR SDMHPMEIVEA+DKLQERLRVVPGDD LS EAQKNATLFFNILLRST 
Sbjct: 984  AQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVPGDDLLSVEAQKNATLFFNILLRSTF 1043

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVL+EY LT+EAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1044 ASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1103

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1104 AGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1138


>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
            [Populus trichocarpa] gi|550338614|gb|ERP60834.1|
            DNA-directed RNA polymerase II largest subunit family
            protein [Populus trichocarpa]
          Length = 1837

 Score = 1949 bits (5050), Expect = 0.0
 Identities = 956/1117 (85%), Positives = 1037/1117 (92%), Gaps = 2/1117 (0%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEHSE  + GKP+ GGLSDPRLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVIQIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADEEDH+FKQA+K+KNPK RLK++LD CKNKTKCE
Sbjct: 89   MFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQALKIKNPKSRLKKILDACKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I             KK  GGCG+QQPK+TI+GMK+IAEY+  RKK+D+Q+QL PEP
Sbjct: 149  GGDEIDVQGQDNEEPV--KKSRGGCGAQQPKLTIEGMKMIAEYKVQRKKSDDQEQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ LTAERVL++LKRISDE+CQ+LG DP++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQTLTAERVLSVLKRISDEDCQLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE++GAPAHI++EFAQLLQFHVATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIISEFAQLLQFHVATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSDHHLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAPTI KPRP+WTGKQVFNLIIPKQINLIR +AWH +SE+G +T GDT VRI
Sbjct: 566  WEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQINLIRTAAWHMDSERGMITPGDTLVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+SSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ  FS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA+TMEKINETISNAK +V+ LI KAQ K+LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADASTMEKINETISNAKNEVKDLIRKAQNKELEAEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQKLDSLKMK+ EFD  ++YEFD + W+
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKAEFDRVFRYEFDDEDWN 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P YM+  ++EDL++IRE ++VF+AEVQKLEADR QLG EIA +GDN+WP+PVNLKRLIWN
Sbjct: 926  PTYMMTDHVEDLRNIRELRDVFDAEVQKLEADRYQLGTEIATTGDNTWPMPVNLKRLIWN 985

Query: 466  GQKLFKIDPR--RPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRS 293
             QK FKID R  R SD+HPME VEAVDKLQERL+VVPGDD LS EAQKNATLFF ILLRS
Sbjct: 986  AQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKVVPGDDLLSVEAQKNATLFFGILLRS 1045

Query: 292  TLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTF 113
            TLASKRVL+EY L++EAF+W++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTF
Sbjct: 1046 TLASKRVLQEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTF 1105

Query: 112  HYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            HYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1106 HYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1142


>gb|AFW57310.1| RNA polymerase II large subunit family protein [Zea mays]
          Length = 1850

 Score = 1949 bits (5050), Expect = 0.0
 Identities = 949/1115 (85%), Positives = 1035/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH+E  + GKP+ GGLSDPRLGTIDRK+KCE+C AGMAECPGHFGHLELAKP
Sbjct: 29   RQMSVIQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADE++ +FKQA+K++NPK+RLKR+ D CK+K  C 
Sbjct: 89   MFHIGFIKTVLSIMRCVCFNCSKILADEDETKFKQALKIRNPKNRLKRIYDACKSKKVCA 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD +            K+   GGCG+QQP IT+DGMK++AE++AP+KK D+QDQL PEP
Sbjct: 149  GGDDLDVQEQDTDEPIKKR---GGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQL-PEP 204

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVLN+LKRISDE+C +LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 205  VERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTS 264

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI+TEFAQLLQFH+ATYFDN+LPGQPRAT
Sbjct: 265  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNDLPGQPRAT 324

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINID+LGVPWSIALNLT
Sbjct: 325  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLT 384

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HLELGYKV
Sbjct: 385  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 444

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 445  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 504

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMW
Sbjct: 505  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 564

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            W++FDGKIPAPTI KPRPIWTGKQVFNLIIPKQINLIR+SAWH+E EKGF+T GDT VRI
Sbjct: 565  WQDFDGKIPAPTILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRI 624

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKK+LG+ SGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIG
Sbjct: 625  EKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 684

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA+TME IN+TIS AK  V++LI+KA EK+LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 685  DTIADASTMETINDTISKAKNAVKELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARD 744

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQ SLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 745  DAGSSAQNSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 804

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 805  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 864

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD+ ++YE D ++W 
Sbjct: 865  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNVFRYELDDENWR 924

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            PNYMLP +++DLK+IREF+NVF AEVQKLEADR QLG EI  +GDNSWP+PVNLKRLIWN
Sbjct: 925  PNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQLGSEITTTGDNSWPMPVNLKRLIWN 984

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEA+DKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 985  AQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTF 1044

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LTKEAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1045 ASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1104

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1105 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1139


>gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indica Group]
          Length = 1449

 Score = 1948 bits (5047), Expect = 0.0
 Identities = 949/1113 (85%), Positives = 1036/1113 (93%)
 Frame = -3

Query: 3340 MSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKPMY 3161
            MSV QIEH+E  + GKP+ GGLSDPRLGTID+K+KCE+C AGMAECPGHFGHLELAKPM+
Sbjct: 1    MSVVQIEHAETMERGKPKPGGLSDPRLGTIDQKIKCETCMAGMAECPGHFGHLELAKPMF 60

Query: 3160 HIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCEGG 2981
            HIGF+KTVLSI+RCVCFNCS+ILADE+D +FKQA+K++NPK+RLKR+ D CK+K  C GG
Sbjct: 61   HIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNPKNRLKRIYDACKSKKVCAGG 120

Query: 2980 DSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEPVE 2801
            D +           VKK+  GGCG+QQP IT+DGMK++AE++AP+KK D+Q+QL PEPVE
Sbjct: 121  DDLDVQEQQDTDEPVKKR--GGCGAQQPNITVDGMKMVAEFKAPKKKNDDQEQL-PEPVE 177

Query: 2800 RKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNSTSR 2621
            RKQ L+AERVLN+LKRISDE+C +LG +P+FARPDWMILQVL        PSVMM+++SR
Sbjct: 178  RKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSR 237

Query: 2620 SEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRATQR 2441
            SEDDLTHQLAMIIRHNE L++QE+NGAPAHI+TEFAQLLQFH+ATYFDNELPGQPRATQR
Sbjct: 238  SEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQR 297

Query: 2440 SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLTYP 2261
            SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINID+LGVPWSIALNLTYP
Sbjct: 298  SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYP 357

Query: 2260 EVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKVER 2081
            E VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HLELGYKVER
Sbjct: 358  ETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVER 417

Query: 2080 HLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQS 1901
            HLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQS
Sbjct: 418  HLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQS 477

Query: 1900 FETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWE 1721
            FETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMWWE
Sbjct: 478  FETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWE 537

Query: 1720 EFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRIEK 1541
            +FDGK+PAP I KPRPIWTGKQVFNLIIPK INLIR+SAWH+E+E GF+T GDT VRIEK
Sbjct: 538  DFDGKVPAPAILKPRPIWTGKQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVRIEK 597

Query: 1540 GEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIGDT 1361
            GE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIGDT
Sbjct: 598  GELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDT 657

Query: 1360 IADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARDDA 1181
            IADAATM KINETIS AK  V++LI++A +K+LEAEPGRTMMESFEN+VNQVLNKARDDA
Sbjct: 658  IADAATMVKINETISKAKDDVKELIKQAHDKQLEAEPGRTMMESFENRVNQVLNKARDDA 717

Query: 1180 GNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHFTK 1001
            G+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHFTK
Sbjct: 718  GSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTK 777

Query: 1000 DDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIM 821
            DD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIM
Sbjct: 778  DDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIM 837

Query: 820  VKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWSPN 641
            VKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD+ ++YE D ++W PN
Sbjct: 838  VKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPN 897

Query: 640  YMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWNGQ 461
            YMLP +++DLK+IREF+NVF AEVQKLEADR QLG EIA +GDN+WP+PVNLKRLIWN Q
Sbjct: 898  YMLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGSEIATTGDNTWPMPVNLKRLIWNAQ 957

Query: 460  KLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTLAS 281
            K FKID RRPSDMHPMEIVEA+DKLQERL+VVPGDD +S EAQKNATLFFNILLRST AS
Sbjct: 958  KTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFAS 1017

Query: 280  KRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 101
            KRVLKEY LTKEAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 1018 KRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 1077

Query: 100  VSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            VSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1078 VSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1110


>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
            gi|241940227|gb|EES13372.1| hypothetical protein
            SORBIDRAFT_07g003680 [Sorghum bicolor]
          Length = 1857

 Score = 1948 bits (5046), Expect = 0.0
 Identities = 949/1115 (85%), Positives = 1039/1115 (93%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH+E  + GKP+ GGLSDPRLGTIDRK+KCE+C AGMAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADE++ +FKQA+K++NPK+RLKR+ D CK+K  C 
Sbjct: 89   MFHIGFIKTVLSIMRCVCFNCSKILADEDETKFKQALKIRNPKNRLKRIYDACKSKKVCA 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD +           VKK+  GGCG+QQP IT+DGMK++AE++AP+KK+D+QDQL PEP
Sbjct: 149  GGDDLDVQEQDTDEP-VKKR--GGCGAQQPNITVDGMKMVAEFKAPKKKSDDQDQL-PEP 204

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVLN+LKRISDE+C +LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 205  VERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTS 264

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI+TEFAQLLQFH+ATYFDNELPGQPRAT
Sbjct: 265  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRAT 324

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINID+LGVPWSIALNLT
Sbjct: 325  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLT 384

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HLELGYKV
Sbjct: 385  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 444

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 445  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 504

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMW
Sbjct: 505  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 564

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            W++FDGKIPAP I KPRPIWTGKQVFNLIIPKQINLIR+SAWH+E EKGF+T GDT VRI
Sbjct: 565  WQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRI 624

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKK+LG+ +GSLIH+IWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIG
Sbjct: 625  EKGELLSGTLCKKSLGTGTGSLIHIIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 684

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA+TM+ IN+TI  AK +V++LI+KA EK+LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 685  DTIADASTMQTINDTICKAKDEVKELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARD 744

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 745  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 804

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 805  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 864

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD+ ++YE D ++W 
Sbjct: 865  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNLFRYELDDENWR 924

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            PNYMLP +++DLK+IREF+NVF AEVQKLEADR QLG EIA +GDNSWP+PVNLKRLIWN
Sbjct: 925  PNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGDNSWPMPVNLKRLIWN 984

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK F+ID RRPSDMHPMEIVEAVDKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 985  AQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDPMSIEAQKNATLFFNILLRSTF 1044

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LTKEAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1045 ASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1104

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1105 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1139


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score = 1947 bits (5045), Expect = 0.0
 Identities = 952/1115 (85%), Positives = 1034/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV  IEH E  + GKP+ GGLSDPRLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+K VLSILRCVCFNCS+ILADE+D +FKQAM+++NPK+RL+++LD CKNKTKCE
Sbjct: 89   MFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKNRLRKMLDACKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I             KK  GGCG+QQPKI+IDGMK++AEY+  +KK+D+ +Q MPEP
Sbjct: 149  GGDEIDVQGHDTEEPV--KKSRGGCGAQQPKISIDGMKMVAEYKMQKKKSDDPEQ-MPEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQQL+AERVL+ILKR+SDE+C +LG +P+FARPDWMILQ L        PSVMM+++
Sbjct: 206  VERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWMILQALPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE LK+QE+NGAPAHI++EFAQLLQFH+ATYFDN+LPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATYFDNDLPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDP INIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSD HLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I KPRP+WTGKQVFNLIIPKQINL+RYSAWHN+SEKG++T GDTQVRI
Sbjct: 566  WEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEKGYITPGDTQVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQ FS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA+TMEKINETISNAK KV++LI+ AQEK LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  DAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QKLDSLK K+  FDD Y YE D  +W+
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFDDMYAYEIDDPNWN 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P+YMLP  +EDLK IRE ++VF+AEVQKLEADR QLG EIA +GDNSWPLPVN++RL+ N
Sbjct: 926  PSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEAVDKLQERL+VVPGDD LS EAQKNATLFFNILLRS L
Sbjct: 986  AQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSAL 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY L++EAFEW+VGEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score = 1947 bits (5045), Expect = 0.0
 Identities = 952/1115 (85%), Positives = 1034/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV  IEH E  + GKP+ GGLSDPRLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+K VLSILRCVCFNCS+ILADE+D +FKQAM+++NPK+RL+++LD CKNKTKCE
Sbjct: 89   MFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKNRLRKMLDACKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I             KK  GGCG+QQPKI+IDGMK++AEY+  +KK+D+ +Q MPEP
Sbjct: 149  GGDEIDVQGQDTEEPV--KKSRGGCGAQQPKISIDGMKMVAEYKMQKKKSDDPEQ-MPEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQQL+AERVL+ILKR+SDE+C +LG +P+FARPDWMILQ L        PSVMM+++
Sbjct: 206  VERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWMILQALPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE LK+QE+NGAPAHI++EFAQLLQFH+ATYFDN+LPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATYFDNDLPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDP INIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSD HLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I KPRP+WTGKQVFNLIIPKQINL+RYSAWHN+SEKG++T GDTQVRI
Sbjct: 566  WEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEKGYITPGDTQVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQ FS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA+TMEKINETISNAK KV++LI+ AQEK LEAEPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  DAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QKLDSLK K+  FDD Y YE D  +W+
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFDDMYAYEIDDPNWN 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P+YMLP  +EDLK IRE ++VF+AEVQKLEADR QLG EIA +GDNSWPLPVN++RL+ N
Sbjct: 926  PSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEAVDKLQERL+VVPGDD LS EAQKNATLFFNILLRS L
Sbjct: 986  AQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSAL 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY L++EAFEW+VGEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140


>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
            communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
            polymerase II largest subunit, putative [Ricinus
            communis]
          Length = 1855

 Score = 1947 bits (5043), Expect = 0.0
 Identities = 953/1114 (85%), Positives = 1035/1114 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIE SE  + GKP+ GGLSD RLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEFSETTERGKPKPGGLSDLRLGTIDRKMKCETCTANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGFLKTVLSI+RCVCFNCS+ILADEEDH+FKQA+K+KNPK+RLK++LD CKNKTKCE
Sbjct: 89   MFHIGFLKTVLSIMRCVCFNCSKILADEEDHKFKQALKIKNPKNRLKKILDACKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I             KK  GGCG+QQP++TI+GMK+IAEY+A RKK D+Q+QL PEP
Sbjct: 149  GGDDIDVHSQDTDEPV--KKSRGGCGAQQPRMTIEGMKMIAEYKAQRKKNDDQEQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ LTAERVL +LKRISD++C++LGF+P++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQTLTAERVLGVLKRISDDDCRLLGFNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE LKKQEK GAPAHI++EFAQLLQFHVATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIISEFAQLLQFHVATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSDHHLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I KPRP+WTGKQVFNLIIPKQINLIR +AWH++SE+G +T GDT VRI
Sbjct: 566  WEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLIRTAAWHSDSERGVITPGDTLVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GT+CKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIG
Sbjct: 626  EKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETISNAK  V++LI KAQ K+LE +PGRTMMESFEN+VNQVLN+ARD
Sbjct: 686  DTIADAATMEKINETISNAKNAVKELIRKAQNKELEPKPGRTMMESFENEVNQVLNRARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD  +KYE D ++W+
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRVFKYELDDENWN 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P YM   +I+DLK+IRE ++VF+AEVQKLEADR QLG EIA +GD+SWPLPVNL+RLIWN
Sbjct: 926  PTYMYQDHIDDLKNIRELRDVFDAEVQKLEADRYQLGTEIATTGDSSWPLPVNLRRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FK+D RRPSD+HPME VEAVDKLQERL+VVPGDD LS EAQKNATLFF ILLRSTL
Sbjct: 986  AQKTFKVDKRRPSDIHPMEAVEAVDKLQERLKVVPGDDPLSVEAQKNATLFFGILLRSTL 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVL++Y LT+EAF+W++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 5
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLS++L
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFL 1139


>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
            max]
          Length = 1827

 Score = 1941 bits (5028), Expect = 0.0
 Identities = 950/1115 (85%), Positives = 1031/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH E  + GKP+ GGLSDPRLGTIDRKLKCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKLKCETCTASMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGFLKTVL+I+RCVCFNCS+ILADE DH+FKQA++++NPK+RLK++LD CKNK+KCE
Sbjct: 89   MFHIGFLKTVLTIMRCVCFNCSKILADENDHKFKQALRIRNPKNRLKKILDACKNKSKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I             KK  GGCG+QQPKITI+GMK+IAEY+A RKK+D+Q+QL PEP
Sbjct: 149  GGDEIDIPGQDTDEPV--KKSRGGCGAQQPKITIEGMKMIAEYKAQRKKSDDQEQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVL +LKRISDE+CQ+LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE LK+QE+NG+PAHI++EFAQLLQFH+ATYFDNELPG PRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSDHHLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFI KDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I KP P+WTGKQVFNLIIPKQINLIRYS+WH+ESE+G +T GDT VRI
Sbjct: 566  WEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQINLIRYSSWHSESERGSITPGDTMVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ  FS+GIG
Sbjct: 626  EKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA+TME IN+TIS AK KV+QLI +AQEKKLEAEPGRTMM+SFEN+VNQ LN+ARD
Sbjct: 686  DTIADASTMETINQTISAAKEKVKQLIREAQEKKLEAEPGRTMMDSFENRVNQTLNRARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGF  RTLPHF
Sbjct: 746  DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKMK+ EFD  ++YEFD ++W 
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKTEFDRVFRYEFDDENWK 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P YML   +EDLK+IREF+NVF AEVQKLEADR QL  EIA +GD+S PLPVNLKRLIWN
Sbjct: 926  PTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQLATEIATTGDSSLPLPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FK+D RRPSDMHPMEIVEA+DKLQERL+VVPG+D LSQEAQKNATL FNILLRST 
Sbjct: 986  AQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVPGEDLLSQEAQKNATLLFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVL+EY L++EAFEW+VGEIE+RFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL+
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLR 1140


>gb|EMT20712.1| DNA-directed RNA polymerase II subunit RPB1 [Aegilops tauschii]
          Length = 1861

 Score = 1941 bits (5027), Expect = 0.0
 Identities = 945/1115 (84%), Positives = 1033/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV  IEH+E  + GK + GGLSDPRLGTIDRK+KC++C AGMAECPGHFGHLELAKP
Sbjct: 29   RQMSVVVIEHAETMERGKAKPGGLSDPRLGTIDRKIKCDTCMAGMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADEED +FKQA+K++NPK+RL+R+ D CK+K  C 
Sbjct: 89   MFHIGFIKTVLSIMRCVCFNCSKILADEEDTKFKQALKIRNPKNRLRRIYDACKSKKICA 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD +           VKK+  GGCG+QQP IT+DGMK++AE++A +KK+D+QDQL PEP
Sbjct: 149  GGDELEVQDQQDADEPVKKR--GGCGAQQPNITVDGMKMVAEFKATKKKSDDQDQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVLN+LKRISDE+C +LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI+TEFAQLLQFH+ATYFDN+LPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNDLPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I +PRPIWTGKQVFNLIIPK INLIR+SAWH E+E GF+T GDT VRI
Sbjct: 566  WEDFDGKVPAPAILRPRPIWTGKQVFNLIIPKLINLIRFSAWHAETESGFITPGDTMVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETI  AK +V++LI++AQEK LE EPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADAATMEKINETIGTAKNEVKELIKQAQEKNLEPEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD+ ++YE D ++W 
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFDNVFRYELDDENWR 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P YMLP +++DLK+IREF+NVF AEVQKLEADR QLG EI  +GDN+WP+PVNLKRLIWN
Sbjct: 926  PTYMLPDHVDDLKTIREFRNVFEAEVQKLEADRLQLGTEITTTGDNTWPMPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEA+DKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LTKE+FEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140


>gb|EMS50869.1| DNA-directed RNA polymerase II subunit RPB1 [Triticum urartu]
          Length = 2040

 Score = 1941 bits (5027), Expect = 0.0
 Identities = 945/1115 (84%), Positives = 1033/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV  IEH+E  + GK + GGLSDPRLGTIDRK+KC++C AGMAECPGHFGHLELAKP
Sbjct: 29   RQMSVVVIEHAETMERGKAKPGGLSDPRLGTIDRKIKCDTCMAGMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADE+D +FKQA+K++NPK+RL+R+ D CK+K  C 
Sbjct: 89   MFHIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNPKNRLRRIYDACKSKKICA 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD +           VKK+  GGCG+QQP IT+DGMK++AE++A +KK+D+QDQL PEP
Sbjct: 149  GGDELEVQDQQDADEPVKKR--GGCGAQQPNITVDGMKMVAEFKATKKKSDDQDQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVLN+LKRISDE+C +LG +P+FARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI+TEFAQLLQFH+ATYFDN+LPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNDLPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I +PRPIWTGKQVFNLIIPK INLIR+SAWH E+E GF+T GDT VRI
Sbjct: 566  WEDFDGKVPAPAILRPRPIWTGKQVFNLIIPKLINLIRFSAWHAETESGFITPGDTMVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETI  AK +V++LI++AQEK LE EPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADAATMEKINETIGTAKNEVKELIKQAQEKNLEPEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD+ ++YE D ++W 
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFDNVFRYELDDENWR 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P YMLP +++DLK+IREF+NVF AEVQKLEADR QLG EI  +GDN+WP+PVNLKRLIWN
Sbjct: 926  PTYMLPDHVDDLKTIREFRNVFEAEVQKLEADRLQLGTEITTTGDNTWPMPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEA+DKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LTKE+FEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140


>dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1859

 Score = 1941 bits (5027), Expect = 0.0
 Identities = 945/1115 (84%), Positives = 1032/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV  IEH+E  + GK + GGLSDPRLGTIDRK+KC++C AGMAECPGHFGHLELAKP
Sbjct: 29   RQMSVVVIEHAETMERGKAKPGGLSDPRLGTIDRKIKCDTCMAGMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+RCVCFNCS+ILADEE+ +FKQA+K++NPKHRL+R+ D CK+K  C 
Sbjct: 89   MFHIGFIKTVLSIMRCVCFNCSKILADEEETKFKQALKIRNPKHRLRRIYDACKSKKICA 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD +           VKK+   GCG+QQP IT+DGMK++AE++A +KK+D+QDQL PEP
Sbjct: 149  GGDELDVQDQQDTDEPVKKR--SGCGAQQPNITVDGMKMVAEFKATKKKSDDQDQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ L+AERVLN+LKRISDE+C +LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L+KQE+NGAPAHI+TEFAQLLQFH+ATYFDN+LPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRKQERNGAPAHIITEFAQLLQFHIATYFDNDLPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+K+SSD HLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+PAP I +PRPIWTGKQVFNLIIPK INLIR+SAWH E+E GF+T GDT VRI
Sbjct: 566  WEDFDGKVPAPAILRPRPIWTGKQVFNLIIPKLINLIRFSAWHAETESGFITPGDTMVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADAATMEKINETI  AK +V++LI++AQEK LE EPGRTMMESFEN+VNQVLNKARD
Sbjct: 686  DTIADAATMEKINETIGTAKNEVKELIKQAQEKNLEPEPGRTMMESFENRVNQVLNKARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            DAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ EFD+ ++YE D ++W 
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFDNVFRYELDDENWR 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            P YMLP +++DLK+IREF+NVF AEVQKLEADR QLG EI  +GDN+WP+PVNLKRLIWN
Sbjct: 926  PTYMLPDHVDDLKTIREFRNVFEAEVQKLEADRLQLGTEITTTGDNTWPMPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FKID RRPSDMHPMEIVEA+DKLQERL+VVPGDD +S EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKEY LTKE+FEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score = 1940 bits (5026), Expect = 0.0
 Identities = 946/1115 (84%), Positives = 1032/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH E  + GKP+ GGLSDPRLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+R VCFNCS+ILADE+DH+FKQA+K++NPK+RLK++LD CKNKTKCE
Sbjct: 89   MFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNRLKKILDACKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I            KKK  GGCG+QQPK+TI+GMK+IAEY+A RKK D+Q+QL PEP
Sbjct: 149  GGDEIDVPGQDGEEPLKKKK--GGCGAQQPKLTIEGMKMIAEYKAQRKKNDDQEQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ LTAERVL +LKRISDE+CQ+LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI++EFAQLLQFH+ATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSDHHLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+P PTI KPRP+WTGKQVFNLIIPKQINL R +AWH +++KG LT GDT VRI
Sbjct: 566  WEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDKGILTAGDTLVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ  FS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA TME IN+TIS AK  V+ LI++AQ+K LE EPGRTMMESFEN+VNQVLN ARD
Sbjct: 686  DTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFENKVNQVLNTARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            +AG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  EAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LDSLKMK+ EFD  +++E D+++W+
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWN 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            PNYML  YI+DLK+I+E ++VF+AEVQKLEADR QL  EIA SGD+SWPLPVNLKRLIWN
Sbjct: 926  PNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FK+DPRRPSDMHPME+VEAVDKLQERL+VVPG+D LS EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKE+ LT+EAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score = 1938 bits (5021), Expect = 0.0
 Identities = 945/1115 (84%), Positives = 1031/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH E  + GKP+ GGLSDPRLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+R VCFNCS+ILADE+DH+FKQA+K++NPK+RLK++LD CKNKTKCE
Sbjct: 89   MFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNRLKKILDACKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I            K K  GGCG+QQPK+TI+GMK+IAEY+A RKK D+Q+QL PEP
Sbjct: 149  GGDEIDVPGQDGEEPLKKNK--GGCGAQQPKLTIEGMKMIAEYKAQRKKNDDQEQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ LTAERVL +LKRISDE+CQ+LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI++EFAQLLQFH+ATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSDHHLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+P PTI KPRP+WTGKQVFNLIIPKQINL R +AWH +++KG LT GDT VRI
Sbjct: 566  WEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDKGILTAGDTLVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ  FS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA TME IN+TIS AK  V+ LI++AQ+K LE EPGRTMMESFEN+VNQVLN ARD
Sbjct: 686  DTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFENKVNQVLNTARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            +AG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  EAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LDSLKMK+ EFD  +++E D+++W+
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWN 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            PNYML  YI+DLK+I+E ++VF+AEVQKLEADR QL  EIA SGD+SWPLPVNLKRLIWN
Sbjct: 926  PNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FK+DPRRPSDMHPME+VEAVDKLQERL+VVPG+D LS EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKE+ LT+EAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score = 1938 bits (5021), Expect = 0.0
 Identities = 945/1115 (84%), Positives = 1031/1115 (92%)
 Frame = -3

Query: 3346 RQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTIDRKLKCESCAAGMAECPGHFGHLELAKP 3167
            RQMSV QIEH E  + GKP+ GGLSDPRLGTIDRK+KCE+C A MAECPGHFGHLELAKP
Sbjct: 29   RQMSVVQIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKP 88

Query: 3166 MYHIGFLKTVLSILRCVCFNCSRILADEEDHRFKQAMKVKNPKHRLKRVLDCCKNKTKCE 2987
            M+HIGF+KTVLSI+R VCFNCS+ILADE+DH+FKQA+K++NPK+RLK++LD CKNKTKCE
Sbjct: 89   MFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNRLKKILDACKNKTKCE 148

Query: 2986 GGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKITIDGMKIIAEYRAPRKKADEQDQLMPEP 2807
            GGD I            K K  GGCG+QQPK+TI+GMK+IAEY+A RKK D+Q+QL PEP
Sbjct: 149  GGDEIDVPGQDGEEPLKKNK--GGCGAQQPKLTIEGMKMIAEYKAQRKKNDDQEQL-PEP 205

Query: 2806 VERKQQLTAERVLNILKRISDEECQMLGFDPQFARPDWMILQVLXXXXXXXXPSVMMNST 2627
            VERKQ LTAERVL +LKRISDE+CQ+LG +P++ARPDWMILQVL        PSVMM+++
Sbjct: 206  VERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265

Query: 2626 SRSEDDLTHQLAMIIRHNETLKKQEKNGAPAHIVTEFAQLLQFHVATYFDNELPGQPRAT 2447
            SRSEDDLTHQLAMIIRHNE L++QE+NGAPAHI++EFAQLLQFH+ATYFDNELPGQPRAT
Sbjct: 266  SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRAT 325

Query: 2446 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLGVPWSIALNLT 2267
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQLGVPWSIALNLT
Sbjct: 326  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385

Query: 2266 YPEVVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKRSSDHHLELGYKV 2087
            YPE VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK+SSDHHLELGYKV
Sbjct: 386  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445

Query: 2086 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1907
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 446  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505

Query: 1906 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 1727
            QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW
Sbjct: 506  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565

Query: 1726 WEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRYSAWHNESEKGFLTLGDTQVRI 1547
            WE+FDGK+P PTI KPRP+WTGKQVFNLIIPKQINL R +AWH +++KG LT GDT VRI
Sbjct: 566  WEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDKGILTAGDTLVRI 625

Query: 1546 EKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSMGIG 1367
            EKGE+L GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ  FS+GIG
Sbjct: 626  EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685

Query: 1366 DTIADAATMEKINETISNAKVKVQQLIEKAQEKKLEAEPGRTMMESFENQVNQVLNKARD 1187
            DTIADA TME IN+TIS AK  V+ LI++AQ+K LE EPGRTMMESFEN+VNQVLN ARD
Sbjct: 686  DTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFENKVNQVLNTARD 745

Query: 1186 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHF 1007
            +AG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHF
Sbjct: 746  EAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805

Query: 1006 TKDDKGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 827
            TKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 806  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865

Query: 826  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRKEFDDTYKYEFDQDSWS 647
            IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LDSLKMK+ EFD  +++E D+++W+
Sbjct: 866  IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWN 925

Query: 646  PNYMLPVYIEDLKSIREFQNVFNAEVQKLEADRRQLGIEIAPSGDNSWPLPVNLKRLIWN 467
            PNYML  YI+DLK+I+E ++VF+AEVQKLEADR QL  EIA SGD+SWPLPVNLKRLIWN
Sbjct: 926  PNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWN 985

Query: 466  GQKLFKIDPRRPSDMHPMEIVEAVDKLQERLRVVPGDDGLSQEAQKNATLFFNILLRSTL 287
             QK FK+DPRRPSDMHPME+VEAVDKLQERL+VVPG+D LS EAQKNATLFFNILLRST 
Sbjct: 986  AQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1045

Query: 286  ASKRVLKEYHLTKEAFEWIVGEIEARFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 107
            ASKRVLKE+ LT+EAFEW++GEIE+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1046 ASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1105

Query: 106  AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2
            AGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1106 AGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140