BLASTX nr result
ID: Ephedra26_contig00015811
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00015811
(803 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002519992.1| ribosomal protein S3 (chloroplast) [Ephedra ... 313 6e-83
dbj|BAN16899.1| ribosomal protein S3 (chloroplast) [Gnetum ula] 221 2e-55
ref|YP_002519746.1| ribosomal protein S3 [Gnetum parvifolium] gi... 217 3e-54
ref|YP_001876615.1| ribosomal protein S3 [Welwitschia mirabilis]... 214 3e-53
gb|AET45980.1| ribosomal protein S3 (chloroplast) [Pinus remota] 145 2e-32
ref|NP_817232.1| ribosomal protein S3 [Pinus koraiensis] gi|3249... 144 3e-32
gb|AET48491.1| ribosomal protein S3 (chloroplast) [Pinus glabra] 144 3e-32
gb|AET46695.1| ribosomal protein S3 (chloroplast) [Pinus pinceana] 144 3e-32
gb|AET45550.1| ribosomal protein S3 (chloroplast) [Pinus sylvest... 144 3e-32
ref|NP_042447.1| ribosomal protein S3 [Pinus thunbergii] gi|5127... 144 4e-32
gb|AET47413.1| ribosomal protein S3 (chloroplast) [Pinus maximar... 144 4e-32
gb|ACP50930.1| ribosomal protein S3 [Pinus rzedowskii] 144 4e-32
ref|YP_002905111.1| ribosomal protein S3 [Picea sitchensis] gi|3... 144 5e-32
gb|AET46623.1| ribosomal protein S3 (chloroplast) [Pinus pinea] 144 5e-32
ref|YP_002905241.1| ribosomal protein S3 [Pinus gerardiana] gi|2... 144 5e-32
gb|AET48707.1| ribosomal protein S3 (chloroplast) [Pinus elliottii] 142 1e-31
ref|YP_002519576.1| ribosomal protein S3 [Keteleeria davidiana] ... 142 1e-31
ref|YP_004891447.1| ribosomal protein S3 (chloroplast) [Pseudots... 142 1e-31
gb|ACP52228.1| ribosomal protein S3 [Larix occidentalis] 142 1e-31
ref|YP_002905173.1| ribosomal protein S3 [Pinus contorta] gi|226... 142 1e-31
>ref|YP_002519992.1| ribosomal protein S3 (chloroplast) [Ephedra equisetina]
gi|220983593|dbj|BAH11360.1| ribosomal protein S3
(chloroplast) [Ephedra equisetina]
Length = 215
Score = 313 bits (801), Expect = 6e-83
Identities = 167/197 (84%), Positives = 167/197 (84%)
Frame = -1
Query: 800 NSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGRIEIQRKIDLXXXXXXXXX 621
NSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGRIEIQRKIDL
Sbjct: 19 NSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGRIEIQRKIDLINIIIYIGF 78
Query: 620 XXXFKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKRVAV 441
FKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKRVAV
Sbjct: 79 PIFFKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKRVAV 138
Query: 440 KKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCFTVR 261
KKILQKAVELAKKD RTRKTKIKLGRVTLQTLRAEMDYS FTVR
Sbjct: 139 KKILQKAVELAKKDEIEGIRIRIAGRLGGRERTRKTKIKLGRVTLQTLRAEMDYSSFTVR 198
Query: 260 TIHGALGIQLWIFMKEQ 210
TIHGALGIQLWIFMKEQ
Sbjct: 199 TIHGALGIQLWIFMKEQ 215
>dbj|BAN16899.1| ribosomal protein S3 (chloroplast) [Gnetum ula]
Length = 214
Score = 221 bits (564), Expect = 2e-55
Identities = 117/195 (60%), Positives = 140/195 (71%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGRIEIQRKIDLXXXXXXXXXX 618
SVWFAQ R+Y++TL+ED+KIH+ IE FFQ+ ++ SYLGI +IEIQRK++L
Sbjct: 20 SVWFAQNRDYSKTLQEDVKIHQNIEKFFQKQRKHSYLGIAQIEIQRKVNLINVTIYTGFS 79
Query: 617 XXFKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKRVAVK 438
NEK E + +KN I+++L +QKLNI IL+KPYQ ILAEYIA QLEKRVAVK
Sbjct: 80 SLLNNEKGEFSELKNKIRQSLGPINQKLNIKVGILSKPYQNAKILAEYIAQQLEKRVAVK 139
Query: 437 KILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCFTVRT 258
KILQKAVELA+K+ RTRK KIK+GRVTLQTLRAEMDY C+TVRT
Sbjct: 140 KILQKAVELAQKEDIEGIRIQVAGRLGGRERTRKAKIKIGRVTLQTLRAEMDYCCYTVRT 199
Query: 257 IHGALGIQLWIFMKE 213
IHG LGI LWIFMKE
Sbjct: 200 IHGTLGILLWIFMKE 214
>ref|YP_002519746.1| ribosomal protein S3 [Gnetum parvifolium]
gi|512721612|ref|YP_008082231.1| ribosomal protein S3
(chloroplast) [Gnetum montanum]
gi|149941462|dbj|BAF64898.1| ribosomal protein S3
[Gnetum parvifolium] gi|220983488|dbj|BAH11256.1|
ribosomal protein S3 (chloroplast) [Gnetum parvifolium]
gi|490345057|gb|AGL11077.1| ribosomal protein S3
(chloroplast) [Gnetum montanum]
Length = 214
Score = 217 bits (553), Expect = 3e-54
Identities = 115/195 (58%), Positives = 139/195 (71%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGRIEIQRKIDLXXXXXXXXXX 618
SVWFAQ R+Y++TL+ED+KI++ IE FFQ+ ++ SYLGI +IEIQRK++L
Sbjct: 20 SVWFAQNRDYSKTLQEDVKINQNIEKFFQKQRKHSYLGIAQIEIQRKVNLINVTIYTGFS 79
Query: 617 XXFKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKRVAVK 438
NEK E + +KN I+++L +QKLNI IL+KPYQ ILAEYIA QLEKRVAVK
Sbjct: 80 SLLNNEKGEFSELKNKIRQSLGPINQKLNIKVGILSKPYQNAKILAEYIAQQLEKRVAVK 139
Query: 437 KILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCFTVRT 258
KILQKAVELA+K+ RTRK KIK+GRVTLQTLRAEMDY C+TVRT
Sbjct: 140 KILQKAVELAQKEDIEGIRIQVAGRLGGRERTRKAKIKIGRVTLQTLRAEMDYCCYTVRT 199
Query: 257 IHGALGIQLWIFMKE 213
IHG GI LWIFMKE
Sbjct: 200 IHGTFGILLWIFMKE 214
>ref|YP_001876615.1| ribosomal protein S3 [Welwitschia mirabilis]
gi|163311670|gb|ABY26828.1| ribosomal protein S3
[Welwitschia mirabilis] gi|220983421|dbj|BAH11190.1|
ribosomal protein S3 (chloroplast) [Welwitschia
mirabilis]
Length = 214
Score = 214 bits (545), Expect = 3e-53
Identities = 114/197 (57%), Positives = 138/197 (70%)
Frame = -1
Query: 800 NSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGRIEIQRKIDLXXXXXXXXX 621
+SVWF +KR Y + +ED+KIHK IE +FQRHQ+ SYLGI RIEI+RK+DL
Sbjct: 19 HSVWFVKKRLYPKIFQEDVKIHKSIENYFQRHQQNSYLGIARIEIERKVDLINVIIFTGF 78
Query: 620 XXXFKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKRVAV 441
EK +I+ +KN+I++ L + +KLN+ EIL KPYQ IL E+IA QLEKRVAV
Sbjct: 79 SSFLNKEKGKISSLKNEIRQNLGTK-KKLNVKTEILKKPYQNAKILVEFIASQLEKRVAV 137
Query: 440 KKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCFTVR 261
KKILQKAVELA+K+ RTRKTK K+GRVTLQTLRAEM+Y +TVR
Sbjct: 138 KKILQKAVELAQKEDIEGIRIRIAGRLGGRERTRKTKKKIGRVTLQTLRAEMNYCSYTVR 197
Query: 260 TIHGALGIQLWIFMKEQ 210
TIHG LGIQLWIFMKEQ
Sbjct: 198 TIHGTLGIQLWIFMKEQ 214
>gb|AET45980.1| ribosomal protein S3 (chloroplast) [Pinus remota]
Length = 217
Score = 145 bits (365), Expect = 2e-32
Identities = 85/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDKKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIQVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY F
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYF 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVQTIYGVLGIKIWI 214
>ref|NP_817232.1| ribosomal protein S3 [Pinus koraiensis]
gi|324986391|ref|YP_004276263.1| ribosomal protein S3
[Pinus lambertiana] gi|34924924|sp|Q85WZ0.1|RR3_PINKO
RecName: Full=30S ribosomal protein S3, chloroplastic
gi|29469751|gb|AAO74079.1| ribosomal protein S3 [Pinus
koraiensis] gi|228016147|gb|ACP50984.1| ribosomal
protein S3 [Pinus sibirica] gi|228016274|gb|ACP51109.1|
ribosomal protein S3 [Pinus strobus]
gi|228016653|gb|ACP51482.1| ribosomal protein S3 [Pinus
albicaulis] gi|228016785|gb|ACP51612.1| ribosomal
protein S3 [Pinus armandii] gi|228016910|gb|ACP51735.1|
ribosomal protein S3 [Pinus ayacahuite]
gi|228017155|gb|ACP51976.1| ribosomal protein S3 [Pinus
cembra] gi|228017278|gb|ACP52097.1| ribosomal protein S3
[Pinus flexilis] gi|228017343|gb|ACP52161.1| ribosomal
protein S3 [Pinus lambertiana]
gi|228017537|gb|ACP52352.1| ribosomal protein S3 [Pinus
monticola] gi|228017599|gb|ACP52413.1| ribosomal protein
S3 [Pinus parviflora var. pentaphylla]
gi|228017663|gb|ACP52476.1| ribosomal protein S3 [Pinus
peuce] gi|323514240|gb|ADX89787.1| ribosomal protein S3
[Pinus lambertiana] gi|356996633|gb|AET44550.1|
ribosomal protein S3 (chloroplast) [Pinus chiapensis]
gi|356997069|gb|AET44980.1| ribosomal protein S3
(chloroplast) [Pinus amamiana]
gi|356997284|gb|AET45192.1| ribosomal protein S3
(chloroplast) [Pinus kwangtungensis]
gi|356997356|gb|AET45263.1| ribosomal protein S3
(chloroplast) [Pinus wallichiana]
gi|356997719|gb|AET45621.1| ribosomal protein S3
(chloroplast) [Pinus strobiformis]
gi|356998374|gb|AET46267.1| ribosomal protein S3
(chloroplast) [Pinus pumila] gi|356999390|gb|AET47269.1|
ribosomal protein S3 (chloroplast) [Pinus morrisonicola]
gi|357001507|gb|AET49357.1| ribosomal protein S3
(chloroplast) [Pinus dalatensis]
Length = 217
Score = 144 bits (364), Expect = 3e-32
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIQVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSADRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVQTIYGVLGIKIWI 214
>gb|AET48491.1| ribosomal protein S3 (chloroplast) [Pinus glabra]
Length = 217
Score = 144 bits (364), Expect = 3e-32
Identities = 84/196 (42%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
Frame = -1
Query: 800 NSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXX 627
+S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 19 HSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIKVKIYI 78
Query: 626 XXXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEK 453
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEK
Sbjct: 79 GFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEK 138
Query: 452 RVAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSC 273
RV +K ++KA+ELA+++ R + GRV LQT+RA +DY
Sbjct: 139 RVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCY 198
Query: 272 FTVRTIHGALGIQLWI 225
+ V+TI+G LGI++WI
Sbjct: 199 YPVKTIYGVLGIKIWI 214
>gb|AET46695.1| ribosomal protein S3 (chloroplast) [Pinus pinceana]
Length = 217
Score = 144 bits (364), Expect = 3e-32
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIQVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARAEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVKTIYGVLGIKIWI 214
>gb|AET45550.1| ribosomal protein S3 (chloroplast) [Pinus sylvestris]
Length = 217
Score = 144 bits (364), Expect = 3e-32
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIKVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVKTIYGVLGIKIWI 214
>ref|NP_042447.1| ribosomal protein S3 [Pinus thunbergii]
gi|512721674|ref|YP_008082292.1| ribosomal protein S3
(chloroplast) [Pinus massoniana]
gi|512721747|ref|YP_008082364.1| ribosomal protein S3
(chloroplast) [Pinus taeda]
gi|1173252|sp|P41635.1|RR3_PINTH RecName: Full=30S
ribosomal protein S3, chloroplastic
gi|1262687|dbj|BAA04403.1| ribosomal protein S3 [Pinus
thunbergii] gi|228015956|gb|ACP50796.1| ribosomal
protein S3 [Pinus ponderosa] gi|228016023|gb|ACP50862.1|
ribosomal protein S3 [Pinus resinosa]
gi|228016338|gb|ACP51172.1| ribosomal protein S3 [Pinus
taeda] gi|228016409|gb|ACP51242.1| ribosomal protein S3
[Pinus thunbergii] gi|228016475|gb|ACP51307.1| ribosomal
protein S3 [Pinus torreyana subsp. insularis]
gi|228016536|gb|ACP51367.1| ribosomal protein S3 [Pinus
torreyana subsp. torreyana] gi|228017038|gb|ACP51861.1|
ribosomal protein S3 [Pinus canariensis]
gi|228017474|gb|ACP52290.1| ribosomal protein S3 [Pinus
merkusii] gi|228017730|gb|ACP52542.1| ribosomal protein
S3 [Pinus pinaster] gi|356996780|gb|AET44695.1|
ribosomal protein S3 (chloroplast) [Pinus caribaea]
gi|356996925|gb|AET44838.1| ribosomal protein S3
(chloroplast) [Pinus brutia] gi|356996997|gb|AET44909.1|
ribosomal protein S3 (chloroplast) [Pinus arizonica]
gi|356997141|gb|AET45051.1| ribosomal protein S3
(chloroplast) [Pinus yunnanensis]
gi|356997212|gb|AET45121.1| ribosomal protein S3
(chloroplast) [Pinus yecorensis]
gi|356997501|gb|AET45406.1| ribosomal protein S3
(chloroplast) [Pinus tropicalis]
gi|356997574|gb|AET45478.1| ribosomal protein S3
(chloroplast) [Pinus taiwanensis]
gi|356997792|gb|AET45693.1| ribosomal protein S3
(chloroplast) [Pinus serotina]
gi|356997864|gb|AET45764.1| ribosomal protein S3
(chloroplast) [Pinus sabiniana]
gi|356997937|gb|AET45836.1| ribosomal protein S3
(chloroplast) [Pinus roxburghii]
gi|356998010|gb|AET45908.1| ribosomal protein S3
(chloroplast) [Pinus rigida] gi|356998156|gb|AET46052.1|
ribosomal protein S3 (chloroplast) [Pinus radiata]
gi|356998302|gb|AET46196.1| ribosomal protein S3
(chloroplast) [Pinus pungens]
gi|356998589|gb|AET46479.1| ribosomal protein S3
(chloroplast) [Pinus ponderosa var. scopulorum]
gi|356998881|gb|AET46767.1| ribosomal protein S3
(chloroplast) [Pinus patula] gi|356998954|gb|AET46839.1|
ribosomal protein S3 (chloroplast) [Pinus palustris]
gi|356999027|gb|AET46911.1| ribosomal protein S3
(chloroplast) [Pinus occidentalis]
gi|356999100|gb|AET46983.1| ribosomal protein S3
(chloroplast) [Pinus pseudostrobus var. apulcensis]
gi|356999173|gb|AET47055.1| ribosomal protein S3
(chloroplast) [Pinus nigra] gi|356999246|gb|AET47127.1|
ribosomal protein S3 (chloroplast) [Pinus muricata]
gi|356999318|gb|AET47198.1| ribosomal protein S3
(chloroplast) [Pinus mugo] gi|356999463|gb|AET47341.1|
ribosomal protein S3 (chloroplast) [Pinus montezumae]
gi|356999609|gb|AET47485.1| ribosomal protein S3
(chloroplast) [Pinus massoniana]
gi|356999682|gb|AET47557.1| ribosomal protein S3
(chloroplast) [Pinus lumholtzii]
gi|356999755|gb|AET47629.1| ribosomal protein S3
(chloroplast) [Pinus leiophylla]
gi|356999828|gb|AET47701.1| ribosomal protein S3
(chloroplast) [Pinus lawsonii]
gi|356999901|gb|AET47773.1| ribosomal protein S3
(chloroplast) [Pinus pringlei]
gi|356999974|gb|AET47845.1| ribosomal protein S3
(chloroplast) [Pinus latteri]
gi|357000047|gb|AET47917.1| ribosomal protein S3
(chloroplast) [Pinus kesiya] gi|357000193|gb|AET48061.1|
ribosomal protein S3 (chloroplast) [Pinus jeffreyi]
gi|357000266|gb|AET48133.1| ribosomal protein S3
(chloroplast) [Pinus hwangshanensis]
gi|357000339|gb|AET48205.1| ribosomal protein S3
(chloroplast) [Pinus heldreichii]
gi|357000411|gb|AET48276.1| ribosomal protein S3
(chloroplast) [Pinus hartwegii]
gi|357000484|gb|AET48348.1| ribosomal protein S3
(chloroplast) [Pinus halepensis]
gi|357000556|gb|AET48419.1| ribosomal protein S3
(chloroplast) [Pinus greggii]
gi|357000702|gb|AET48563.1| ribosomal protein S3
(chloroplast) [Pinus fragilissima]
gi|357000775|gb|AET48635.1| ribosomal protein S3
(chloroplast) [Pinus engelmannii]
gi|357000994|gb|AET48851.1| ribosomal protein S3
(chloroplast) [Pinus echinata]
gi|357001069|gb|AET48925.1| ribosomal protein S3
(chloroplast) [Pinus douglasiana]
gi|357001143|gb|AET48998.1| ribosomal protein S3
(chloroplast) [Pinus hartwegii]
gi|357001289|gb|AET49142.1| ribosomal protein S3
(chloroplast) [Pinus devoniana]
gi|357001362|gb|AET49214.1| ribosomal protein S3
(chloroplast) [Pinus densata]
gi|357001435|gb|AET49286.1| ribosomal protein S3
(chloroplast) [Pinus densiflora]
gi|357001722|gb|AET49569.1| ribosomal protein S3
(chloroplast) [Pinus cubensis]
gi|357001795|gb|AET49641.1| ribosomal protein S3
(chloroplast) [Pinus coulteri]
gi|357001868|gb|AET49713.1| ribosomal protein S3
(chloroplast) [Pinus arizonica var. cooperi]
gi|490345136|gb|AGL11138.1| ribosomal protein S3
(chloroplast) [Pinus massoniana]
gi|490345217|gb|AGL11210.1| ribosomal protein S3
(chloroplast) [Pinus taeda]
Length = 217
Score = 144 bits (363), Expect = 4e-32
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIKVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVKTIYGVLGIKIWI 214
>gb|AET47413.1| ribosomal protein S3 (chloroplast) [Pinus maximartinezii]
Length = 217
Score = 144 bits (363), Expect = 4e-32
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIQVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARAEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVQTIYGVLGIKIWI 214
>gb|ACP50930.1| ribosomal protein S3 [Pinus rzedowskii]
Length = 217
Score = 144 bits (363), Expect = 4e-32
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIQVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVKTIYGVLGIKIWI 214
>ref|YP_002905111.1| ribosomal protein S3 [Picea sitchensis]
gi|353351827|ref|YP_004891710.1| ribosomal protein S3
(chloroplast) [Picea morrisonicola]
gi|523420674|ref|YP_008082848.1| ribosomal protein S3
(chloroplast) [Picea abies]
gi|6094138|sp|O62951.1|RR3_PICAB RecName: Full=30S
ribosomal protein S3, chloroplastic
gi|2959583|gb|AAC95497.1| ribosomal protein S3 [Picea
abies] gi|148905984|gb|ABR16153.1| unknown [Picea
sitchensis] gi|226875320|gb|ACO89059.1| ribosomal
protein S3 [Picea sitchensis]
gi|307683685|dbj|BAJ19821.1| ribosomal protein S3 [Picea
morrisonicola] gi|347977490|dbj|BAK86447.1| ribosomal
protein S3 (chloroplast) [Picea morrisonicola]
gi|502524882|emb|CCW23132.1| ribosomal protein S3
(chloroplast) [Picea abies]
Length = 218
Score = 144 bits (362), Expect = 5e-32
Identities = 86/196 (43%), Positives = 115/196 (58%), Gaps = 5/196 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEISRKIDLIQVKIYIG 79
Query: 623 XXXXFKNEKNE---ITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEK 453
E I ++KND+ L D+KL+I E +AKPY+K NILAEYIALQLEK
Sbjct: 80 FPNLLLIEGRGFQGIEKLKNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEK 139
Query: 452 RVAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSC 273
RV +K ++KA+ELA+++ R + GRV LQT+RA +DY
Sbjct: 140 RVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCY 199
Query: 272 FTVRTIHGALGIQLWI 225
+ V+TI+G LGI++WI
Sbjct: 200 YPVQTIYGVLGIKIWI 215
>gb|AET46623.1| ribosomal protein S3 (chloroplast) [Pinus pinea]
Length = 217
Score = 144 bits (362), Expect = 5e-32
Identities = 84/195 (43%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEISRKIDLIKVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVKTIYGVLGIKIWI 214
>ref|YP_002905241.1| ribosomal protein S3 [Pinus gerardiana]
gi|237688692|ref|YP_002905308.1| ribosomal protein S3
[Pinus krempfii] gi|324986462|ref|YP_004276333.1|
ribosomal protein S3 [Pinus monophylla]
gi|324986534|ref|YP_004276404.1| ribosomal protein S3
[Pinus nelsonii] gi|226876084|gb|ACO89340.1| ribosomal
protein S3 [Pinus gerardiana]
gi|226951149|gb|ACO94212.1| ribosomal protein S3 [Pinus
krempfii] gi|228016213|gb|ACP51049.1| ribosomal protein
S3 [Pinus squamata] gi|228016722|gb|ACP51550.1|
ribosomal protein S3 [Pinus aristata]
gi|323522557|gb|ADX94899.1| ribosomal protein S3 [Pinus
monophylla] gi|323522722|gb|ADX94970.1| ribosomal
protein S3 [Pinus nelsonii] gi|356996707|gb|AET44623.1|
ribosomal protein S3 (chloroplast) [Pinus cembroides]
gi|356996852|gb|AET44766.1| ribosomal protein S3
(chloroplast) [Pinus bungeana]
gi|356998229|gb|AET46124.1| ribosomal protein S3
(chloroplast) [Pinus quadrifolia]
gi|357000120|gb|AET47989.1| ribosomal protein S3
(chloroplast) [Pinus johannis]
gi|357000921|gb|AET48779.1| ribosomal protein S3
(chloroplast) [Pinus edulis] gi|357001216|gb|AET49070.1|
ribosomal protein S3 (chloroplast) [Pinus discolor]
gi|357001649|gb|AET49497.1| ribosomal protein S3
(chloroplast) [Pinus culminicola]
Length = 217
Score = 144 bits (362), Expect = 5e-32
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIQVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVQTIYGVLGIKIWI 214
>gb|AET48707.1| ribosomal protein S3 (chloroplast) [Pinus elliottii]
Length = 217
Score = 142 bits (359), Expect = 1e-31
Identities = 84/195 (43%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEICRKIDLIKVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVKTIYGVLGIKIWI 214
>ref|YP_002519576.1| ribosomal protein S3 [Keteleeria davidiana]
gi|220983676|dbj|BAH11442.1| ribosomal protein S3
(chloroplast) [Keteleeria davidiana]
Length = 217
Score = 142 bits (359), Expect = 1e-31
Identities = 83/195 (42%), Positives = 114/195 (58%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHMKSSSNYGGIARVEISRKIDLIQVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLE R
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLENR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVQTIYGVLGIKIWI 214
>ref|YP_004891447.1| ribosomal protein S3 (chloroplast) [Pseudotsuga sinensis var.
wilsoniana] gi|307683497|dbj|BAJ19727.1| ribosomal
protein S3 [Pseudotsuga sinensis var. wilsoniana]
gi|347977665|dbj|BAK86620.1| ribosomal protein S3
[Pseudotsuga sinensis var. wilsoniana]
gi|356998515|gb|AET46406.1| ribosomal protein S3
(chloroplast) [Pseudotsuga menziesii var. menziesii]
Length = 217
Score = 142 bits (358), Expect = 1e-31
Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIQIKIYMG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLE R
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAKPYRKPNILAEYIALQLENR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVQTIYGVLGIKIWI 214
>gb|ACP52228.1| ribosomal protein S3 [Larix occidentalis]
Length = 217
Score = 142 bits (358), Expect = 1e-31
Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+RKIDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRKIDLIQIKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLE R
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAKPYRKPNILAEYIALQLENR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVQTIYGVLGIKIWI 214
>ref|YP_002905173.1| ribosomal protein S3 [Pinus contorta] gi|226875383|gb|ACO89121.1|
ribosomal protein S3 [Pinus contorta]
gi|228016974|gb|ACP51798.1| ribosomal protein S3 [Pinus
banksiana] gi|356997429|gb|AET45335.1| ribosomal protein
S3 (chloroplast) [Pinus virginiana]
gi|357001941|gb|AET49785.1| ribosomal protein S3
(chloroplast) [Pinus clausa]
Length = 217
Score = 142 bits (358), Expect = 1e-31
Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Frame = -1
Query: 797 SVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKS--YLGIGRIEIQRKIDLXXXXXXXX 624
S WFAQ+R Y++ LRED KI CIE + + H + S Y GI R+EI+R IDL
Sbjct: 20 SHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGIARVEIRRNIDLIKVKIYIG 79
Query: 623 XXXXF--KNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQKTNILAEYIALQLEKR 450
+ I +++ND+ L D+KL+I E +AKPY+K NILAEYIALQLEKR
Sbjct: 80 FPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAKPYRKPNILAEYIALQLEKR 139
Query: 449 VAVKKILQKAVELAKKDXXXXXXXXXXXXXXXXXRTRKTKIKLGRVTLQTLRAEMDYSCF 270
V +K ++KA+ELA+++ R + GRV LQT+RA +DY +
Sbjct: 140 VPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYY 199
Query: 269 TVRTIHGALGIQLWI 225
V+TI+G LGI++WI
Sbjct: 200 PVKTIYGVLGIKIWI 214