BLASTX nr result

ID: Ephedra26_contig00015684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00015684
         (674 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002968110.1| hypothetical protein SELMODRAFT_440291 [Sela...    54   8e-09
ref|XP_002970345.1| hypothetical protein SELMODRAFT_441187 [Sela...    54   8e-09
ref|XP_001767508.1| predicted protein [Physcomitrella patens] gi...    60   6e-07

>ref|XP_002968110.1| hypothetical protein SELMODRAFT_440291 [Selaginella moellendorffii]
           gi|300163754|gb|EFJ30364.1| hypothetical protein
           SELMODRAFT_440291 [Selaginella moellendorffii]
          Length = 703

 Score = 53.9 bits (128), Expect(2) = 8e-09
 Identities = 25/67 (37%), Positives = 39/67 (58%)
 Frame = +1

Query: 1   DMWKDPAMLKATFKDEEGVHAKFVINGMKNALSSVAGKDKALFNTDSWVHEVVVNPTIKR 180
           D+WKD A L+A ++D++GV   F+ NGMK+ L  +          + W +EV +N   ++
Sbjct: 183 DLWKDEATLRAAYEDKQGVTGSFIKNGMKHGLELLGHSVSDDEVHEDWEYEVQINSMSRQ 242

Query: 181 VETYVMF 201
           VE YV F
Sbjct: 243 VEMYVRF 249



 Score = 32.3 bits (72), Expect(2) = 8e-09
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 242 DHNIEIREGERVMMVFCTTYTLENIKKLAREAGCNVIKHWGDDSLYTFQL 391
           DH+IEI + ERV++     +T+E++ +L  + G      W   S   F +
Sbjct: 257 DHDIEISKNERVLVEISRKFTVEDVLQLVSQLGFVCHARWTSKSYGCFMM 306


>ref|XP_002970345.1| hypothetical protein SELMODRAFT_441187 [Selaginella moellendorffii]
           gi|300161861|gb|EFJ28475.1| hypothetical protein
           SELMODRAFT_441187 [Selaginella moellendorffii]
          Length = 703

 Score = 53.9 bits (128), Expect(2) = 8e-09
 Identities = 25/67 (37%), Positives = 39/67 (58%)
 Frame = +1

Query: 1   DMWKDPAMLKATFKDEEGVHAKFVINGMKNALSSVAGKDKALFNTDSWVHEVVVNPTIKR 180
           D+WKD A L+A ++D++GV   F+ NGMK+ L  +          + W +EV +N   ++
Sbjct: 183 DLWKDEATLRAAYEDKQGVTGSFIKNGMKHGLELLGHSVSDDEVHEDWEYEVQINSMSRQ 242

Query: 181 VETYVMF 201
           VE YV F
Sbjct: 243 VEMYVRF 249



 Score = 32.3 bits (72), Expect(2) = 8e-09
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 242 DHNIEIREGERVMMVFCTTYTLENIKKLAREAGCNVIKHWGDDSLYTFQL 391
           DH+IEI + ERV++     +T+E++ +L  + G      W   S   F +
Sbjct: 257 DHDIEISKNERVLVEISRKFTVEDVLQLVSQLGFVCHARWTSKSYGCFMM 306


>ref|XP_001767508.1| predicted protein [Physcomitrella patens]
           gi|162681214|gb|EDQ67643.1| predicted protein
           [Physcomitrella patens]
          Length = 268

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/67 (43%), Positives = 44/67 (65%)
 Frame = +1

Query: 1   DMWKDPAMLKATFKDEEGVHAKFVINGMKNALSSVAGKDKALFNTDSWVHEVVVNPTIKR 180
           DMWKD A L + + D++GV   F+ NGM+ AL ++ G +      D+W++EVVVN  ++R
Sbjct: 189 DMWKDTAKLYSAYYDKKGVTELFIKNGMRCAL-ALLGHNTTPSEEDAWIYEVVVNEDLRR 247

Query: 181 VETYVMF 201
           VE Y+ F
Sbjct: 248 VEMYLKF 254


Top