BLASTX nr result

ID: Ephedra26_contig00015624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00015624
         (536 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48113.1| unknown [Medicago truncatula]                           61   2e-07
ref|XP_006382257.1| hypothetical protein POPTR_0005s00400g [Popu...    60   2e-07

>gb|AFK48113.1| unknown [Medicago truncatula]
          Length = 59

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -1

Query: 389 MHRHHTCHHPPSSRCLS*VRLRG*VLDMSSVDNSWIYPWNYIRYLCHH*VI 237
           MHR+H CHHPPSSRCL  V L   VL +   +  W+ PWN + YLC++ VI
Sbjct: 1   MHRYHCCHHPPSSRCLPQVWLPCGVLALFGTNPFWLSPWNSLCYLCYYQVI 51


>ref|XP_006382257.1| hypothetical protein POPTR_0005s00400g [Populus trichocarpa]
           gi|566168547|ref|XP_006382258.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
           gi|550337609|gb|ERP60054.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
           gi|550337610|gb|ERP60055.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
          Length = 106

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +2

Query: 239 SLSDGIDSVYNSRDISKNCQQKTYPKLSPATELKKDTERREDDGKYDVYACCCS 400
           SL DG+DS+ NSR+++K    +TYP    A +L++DT+RR+DDG+ DVYA  CS
Sbjct: 14  SLGDGVDSINNSREVAKEGYGRTYP----AAKLEEDTKRRQDDGQQDVYASSCS 63


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