BLASTX nr result
ID: Ephedra26_contig00015598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00015598
(559 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis tha... 70 5e-10
ref|XP_006401381.1| hypothetical protein EUTSA_v10013799mg [Eutr... 68 1e-09
dbj|BAE94497.1| Vasa [Polyandrocarpa misakiensis] 67 2e-09
ref|XP_006292441.1| hypothetical protein CARUB_v10018659mg [Caps... 66 7e-09
ref|XP_004305883.1| PREDICTED: uncharacterized protein LOC101307... 65 1e-08
tpg|DAA51786.1| TPA: hypothetical protein ZEAMMB73_750935 [Zea m... 65 1e-08
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila] 64 2e-08
gb|AAC37171.1| cnjB [Tetrahymena thermophila] gi|737494|prf||192... 64 2e-08
ref|XP_001025435.2| Zinc knuckle family protein [Tetrahymena the... 64 2e-08
ref|XP_002406044.1| cellular nucleic acid binding protein, putat... 63 4e-08
gb|EMJ16068.1| hypothetical protein PRUPE_ppa020564mg [Prunus pe... 63 6e-08
ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyr... 62 1e-07
dbj|BAE44472.1| Vasa [Botryllus primigenus] 60 4e-07
ref|XP_003874510.1| putative universal minicircle sequence bindi... 60 4e-07
gb|ABM74410.1| vasa protein [Botrylloides violaceus] 60 5e-07
sp|Q04832.1|HEXP_LEIMA RecName: Full=DNA-binding protein HEXBP; ... 59 1e-06
ref|XP_001686738.1| putative universal minicircle sequence bindi... 59 1e-06
ref|XP_004037407.1| universal minicircle sequence binding protei... 58 1e-06
ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [S... 58 1e-06
ref|XP_006651886.1| PREDICTED: DNA topoisomerase 3-alpha-like [O... 57 2e-06
>ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis
thaliana] gi|17529084|gb|AAL38752.1| unknown protein
[Arabidopsis thaliana] gi|22136980|gb|AAM91719.1|
unknown protein [Arabidopsis thaliana]
gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle
protein [Arabidopsis thaliana]
Length = 372
Score = 69.7 bits (169), Expect = 5e-10
Identities = 50/201 (24%), Positives = 73/201 (36%), Gaps = 17/201 (8%)
Frame = -1
Query: 559 QGSCGYFRWCDEVDIPALSENMKASADNMRDEKMKVRINLNADLEGQSDEGCXXXXXXXX 380
+GSCG+F+WC+ DN+ + N++ G
Sbjct: 194 EGSCGFFKWCN---------------DNVVSSPTSYSVTKNSNFGDSDTRG--------Y 230
Query: 379 XXLKTGSERPXXXXXXXXXXXXXXXXXXSACFKCGKEGHWARQCHYNAKN--LKEVKTFS 206
KTG+ C+KCGKEGHWAR C + +K
Sbjct: 231 QNAKTGTP----------------------CYKCGKEGHWARDCTVQSDTGPVKSTSAAG 268
Query: 205 SCFNCGLDDHWVRDCPSKMQNSEARKNALLTSFSDDLEGDLIKDIPSNHQNSD------N 44
CF CG HW RDC ++ N + + +S S G+ K H + D N
Sbjct: 269 DCFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSS---SGECYKCGKQGHWSRDCTGQSSN 325
Query: 43 ENFKSSK---------CFKCG 8
+ F+S + C+KCG
Sbjct: 326 QQFQSGQAKSTSSTGDCYKCG 346
>ref|XP_006401381.1| hypothetical protein EUTSA_v10013799mg [Eutrema salsugineum]
gi|557102471|gb|ESQ42834.1| hypothetical protein
EUTSA_v10013799mg [Eutrema salsugineum]
Length = 384
Score = 68.2 bits (165), Expect = 1e-09
Identities = 52/206 (25%), Positives = 74/206 (35%), Gaps = 22/206 (10%)
Frame = -1
Query: 559 QGSCGYFRWCDEVDIPALSENMKASADNMRDEKMKVRINLNADLEGQSDEGCXXXXXXXX 380
+GSCG+F+WC++ + + + + N G+SD
Sbjct: 201 EGSCGFFKWCNDDAVSSATTYSFTKSSNF----------------GESDT-------RGY 237
Query: 379 XXLKTGSERPXXXXXXXXXXXXXXXXXXSACFKCGKEGHWARQCHYNAKN-------LKE 221
KTG+ C+KCGKEGHWAR C + N +K
Sbjct: 238 QTAKTGTP----------------------CYKCGKEGHWARDCTAQSVNPLSETGPVKS 275
Query: 220 VKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTSFSDDLEGDLIKDIPSNH------ 59
C+ CG HW RDC S+ N + + S S GD K H
Sbjct: 276 SSAAGDCYKCGKQGHWARDCTSQSGNLNSEAGQVKPSSSG---GDCYKCGKPGHWARDCT 332
Query: 58 QNSDNENFKS---------SKCFKCG 8
S N+ F+S +C+KCG
Sbjct: 333 AQSGNQQFQSGQGKAASSGGECYKCG 358
>dbj|BAE94497.1| Vasa [Polyandrocarpa misakiensis]
Length = 705
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/94 (34%), Positives = 46/94 (48%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
CFKCG+EGH +R C N + +CF CG + H R+CP+ N+
Sbjct: 97 CFKCGEEGHMSRDCPSNTST----GSSKACFKCGEEGHMSRECPNNNNNNSK------AC 146
Query: 109 FSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F EG + ++ P+N+ + D S CFKCG
Sbjct: 147 FKCGEEGHMSRECPNNNSSKDGFGTSSRACFKCG 180
Score = 67.0 bits (162), Expect = 3e-09
Identities = 34/95 (35%), Positives = 47/95 (49%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLT 113
+CFKCG+EGH +R C A + K CF CG + H RDCPS ++
Sbjct: 70 SCFKCGQEGHMSRDCTSGASGDTQAK---KCFKCGEEGHMSRDCPSNTSTGSSK-----A 121
Query: 112 SFSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F EG + ++ P+N+ N+ S CFKCG
Sbjct: 122 CFKCGEEGHMSRECPNNNNNN------SKACFKCG 150
Score = 55.8 bits (133), Expect = 7e-06
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLT 113
ACFKCG+EGH +R+C N N +CF CG + H R+CP+ + + +
Sbjct: 121 ACFKCGEEGHMSRECPNNNNN-----NSKACFKCGEEGHMSRECPNNNSSKDGFGTSSRA 175
Query: 112 SFSDDLEGDLIKDIPSNHQNSDN 44
F EG + ++ P + N
Sbjct: 176 CFKCGEEGHMSRECPKAGEPDPN 198
>ref|XP_006292441.1| hypothetical protein CARUB_v10018659mg [Capsella rubella]
gi|482561148|gb|EOA25339.1| hypothetical protein
CARUB_v10018659mg [Capsella rubella]
Length = 433
Score = 65.9 bits (159), Expect = 7e-09
Identities = 50/203 (24%), Positives = 73/203 (35%), Gaps = 19/203 (9%)
Frame = -1
Query: 559 QGSCGYFRWCDEVDIPALSENMKASADNMRDEKMKVRINLNADLEGQSDEGCXXXXXXXX 380
+GSCG+F+WC++ + A + + N+ + +D G
Sbjct: 189 EGSCGFFKWCNDDSVSASTTYSVTNNSNICE----------SDTRGYQTA---------- 228
Query: 379 XXLKTGSERPXXXXXXXXXXXXXXXXXXSACFKCGKEGHWARQCHYNAKN-------LKE 221
KTG+ C+KCGKEGHWAR C + N LK
Sbjct: 229 ---KTGTP----------------------CYKCGKEGHWARDCTVQSGNPLPETGQLKS 263
Query: 220 VKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNAL-LTSFSDDL-----EGDLIKDI---- 71
C+ CG HW RDC + N L TS + D +G +D
Sbjct: 264 TSATGDCYKCGKQGHWARDCTVQSGNLLPETGQLKSTSATGDCYKCGKQGHWARDCTAQS 323
Query: 70 --PSNHQNSDNENFKSSKCFKCG 8
P+ + S +C+KCG
Sbjct: 324 GNPTYEPGQGKSSSSSVECYKCG 346
>ref|XP_004305883.1| PREDICTED: uncharacterized protein LOC101307328 [Fragaria vesca
subsp. vesca]
Length = 434
Score = 64.7 bits (156), Expect = 1e-08
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 5/138 (3%)
Frame = -1
Query: 553 SCGYFRWCDEVDIPALSENMKASADNMRDEKMKVRINLNADLEGQSDEGCXXXXXXXXXX 374
SCG+F+WC+E + A SA R K + +++ Q G
Sbjct: 338 SCGFFKWCNENTVAA------GSAQGARIPKA---VYGSSEASSQGSYGV---------- 378
Query: 373 LKTGSERPXXXXXXXXXXXXXXXXXXSACFKCGKEGHWARQCHYNAKNLK-----EVKTF 209
KTGS +C+KCGKEGHWAR C + N + +
Sbjct: 379 -KTGS----------------------SCYKCGKEGHWARDCSGPSNNAQVEFGGRSTST 415
Query: 208 SSCFNCGLDDHWVRDCPS 155
SC+ CG HW RDCPS
Sbjct: 416 GSCYKCGKTGHWARDCPS 433
>tpg|DAA51786.1| TPA: hypothetical protein ZEAMMB73_750935 [Zea mays]
Length = 369
Score = 64.7 bits (156), Expect = 1e-08
Identities = 46/166 (27%), Positives = 64/166 (38%), Gaps = 15/166 (9%)
Frame = -1
Query: 556 GSCGYFRWCDEVDIPALSENMKASADNMRDEKMKVRINLNADLEGQSDEGCXXXXXXXXX 377
GSCG+F+WCDE+ P + ++ASA D ++ N S
Sbjct: 245 GSCGFFKWCDELQ-PRVGAPLQASAQYQADSMPSIQ---NPSQRSSS------------- 287
Query: 376 XLKTGSERPXXXXXXXXXXXXXXXXXXSACFKCGKEGHWARQC------HYNAKNLKEVK 215
+CFKCG+E HWAR C Y K + V
Sbjct: 288 ----------------------------SCFKCGQENHWARDCPNQPSDPYPDKGGRPVA 319
Query: 214 TFSS---CFNCGLDDHWVRDCPSKMQ------NSEARKNALLTSFS 104
S C+NCG HW RDCP+ S AR ++ L+S++
Sbjct: 320 PAGSPGACYNCGRSGHWSRDCPTSNSGGGGTGTSRARSSSALSSWN 365
>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
Length = 369
Score = 64.3 bits (155), Expect = 2e-08
Identities = 49/206 (23%), Positives = 73/206 (35%), Gaps = 22/206 (10%)
Frame = -1
Query: 559 QGSCGYFRWCDEVDIPALSENMKASADNMRDEKMKVRINLNADLEGQSDEGCXXXXXXXX 380
+GSCG+F+WC++ + A + N+ D +D G
Sbjct: 186 EGSCGFFKWCNDDAVSAPTSYSVTKNSNLGD----------SDTRGYQ------------ 223
Query: 379 XXLKTGSERPXXXXXXXXXXXXXXXXXXSACFKCGKEGHWARQCHYNAK-------NLKE 221
KTG+ C+KCGKEGHWAR C + ++
Sbjct: 224 -IAKTGTP----------------------CYKCGKEGHWARDCTLQSPIPPSEMGPVRS 260
Query: 220 VKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTSFSDDLEGDLIKDIPSNH------ 59
C+ CG HW RDC ++ N + +S S G+ K H
Sbjct: 261 TSAAGECYKCGKQGHWARDCTAQSGNPTYEPGKVKSSSS---SGECYKCGKQGHWARDCT 317
Query: 58 QNSDNENFKSSK---------CFKCG 8
S N+ F+S + C+KCG
Sbjct: 318 GQSGNQQFQSGQAKSTSSAGDCYKCG 343
Score = 55.5 bits (132), Expect = 9e-06
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = -1
Query: 289 CFKCGKEGHWARQC-------HYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNS 140
C+KCGK+GHWAR C + + K + C+ CG HW RDC Q +
Sbjct: 303 CYKCGKQGHWARDCTGQSGNQQFQSGQAKSTSSAGDCYKCGKPGHWARDCTLAAQTT 359
>gb|AAC37171.1| cnjB [Tetrahymena thermophila] gi|737494|prf||1922371A cnjB gene
Length = 1748
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/93 (37%), Positives = 50/93 (53%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
CFKCG+EGH+++ C K ++ +CF CG + H +DCP+ + + +KN T
Sbjct: 1501 CFKCGEEGHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQK--QQQKN---TC 1555
Query: 109 FSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKC 11
F EG + KD P N QNS +KCF C
Sbjct: 1556 FKCKQEGHISKDCP-NSQNSG-----GNKCFNC 1582
Score = 59.7 bits (143), Expect = 5e-07
Identities = 32/94 (34%), Positives = 41/94 (43%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
CFKCGK GH A+ C + K +CF C + H +DCP++ Q
Sbjct: 1451 CFKCGKVGHMAKDC--TEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSG-------C 1501
Query: 109 FSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F EG KD P N Q + + CFKCG
Sbjct: 1502 FKCGEEGHFSKDCP-NPQKQQQQKPRGGACFKCG 1534
Score = 58.9 bits (141), Expect = 8e-07
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPS--KMQNSEARKNAL 119
ACFKC +EGH ++ C N ++ K S CF CG + H+ +DCP+ K Q + R A
Sbjct: 1477 ACFKCNQEGHMSKDC----PNQQQKK--SGCFKCGEEGHFSKDCPNPQKQQQQKPRGGA- 1529
Query: 118 LTSFSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKC 11
F EG + KD P N Q +N CFKC
Sbjct: 1530 --CFKCGEEGHISKDCP-NPQKQQQKN----TCFKC 1558
Score = 58.5 bits (140), Expect = 1e-06
Identities = 34/95 (35%), Positives = 49/95 (51%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLT 113
ACFKCG+EGH ++ C N ++ + ++CF C + H +DCP+ QNS K
Sbjct: 1529 ACFKCGEEGHISKDC----PNPQKQQQKNTCFKCKQEGHISKDCPNS-QNSGGNK----- 1578
Query: 112 SFSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F+ + EG + KD P N + K CF CG
Sbjct: 1579 CFNCNQEGHMSKDCP-------NPSQKKKGCFNCG 1606
>ref|XP_001025435.2| Zinc knuckle family protein [Tetrahymena thermophila]
gi|146143687|gb|EAS05190.2| CnjB protein [Tetrahymena
thermophila SB210]
Length = 1748
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/93 (37%), Positives = 50/93 (53%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
CFKCG+EGH+++ C K ++ +CF CG + H +DCP+ + + +KN T
Sbjct: 1501 CFKCGEEGHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQK--QQQKN---TC 1555
Query: 109 FSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKC 11
F EG + KD P N QNS +KCF C
Sbjct: 1556 FKCKQEGHISKDCP-NSQNSG-----GNKCFNC 1582
Score = 59.7 bits (143), Expect = 5e-07
Identities = 32/94 (34%), Positives = 41/94 (43%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
CFKCGK GH A+ C + K +CF C + H +DCP++ Q
Sbjct: 1451 CFKCGKVGHMAKDC--TEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSG-------C 1501
Query: 109 FSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F EG KD P N Q + + CFKCG
Sbjct: 1502 FKCGEEGHFSKDCP-NPQKQQQQKPRGGACFKCG 1534
Score = 58.9 bits (141), Expect = 8e-07
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPS--KMQNSEARKNAL 119
ACFKC +EGH ++ C N ++ K S CF CG + H+ +DCP+ K Q + R A
Sbjct: 1477 ACFKCNQEGHMSKDC----PNQQQKK--SGCFKCGEEGHFSKDCPNPQKQQQQKPRGGA- 1529
Query: 118 LTSFSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKC 11
F EG + KD P N Q +N CFKC
Sbjct: 1530 --CFKCGEEGHISKDCP-NPQKQQQKN----TCFKC 1558
Score = 58.5 bits (140), Expect = 1e-06
Identities = 34/95 (35%), Positives = 49/95 (51%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLT 113
ACFKCG+EGH ++ C N ++ + ++CF C + H +DCP+ QNS K
Sbjct: 1529 ACFKCGEEGHISKDC----PNPQKQQQKNTCFKCKQEGHISKDCPNS-QNSGGNK----- 1578
Query: 112 SFSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F+ + EG + KD P N + K CF CG
Sbjct: 1579 CFNCNQEGHMSKDCP-------NPSQKKKGCFNCG 1606
>ref|XP_002406044.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
gi|215491870|gb|EEC01511.1| cellular nucleic acid
binding protein, putative [Ixodes scapularis]
Length = 239
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/94 (39%), Positives = 47/94 (50%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLT 113
ACFKCG+EGH +R C + K CFNCG D H RDCP+ Q E K
Sbjct: 19 ACFKCGEEGHMSRDCPSAGGDGDRPKR--GCFNCGEDGHMSRDCPNPKQ--ERSKGC--- 71
Query: 112 SFSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKC 11
F EG + +D P+ + D++ K CFKC
Sbjct: 72 -FKCGEEGHMSRDCPTAGEGGDSDRPKG--CFKC 102
>gb|EMJ16068.1| hypothetical protein PRUPE_ppa020564mg [Prunus persica]
Length = 352
Score = 62.8 bits (151), Expect = 6e-08
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 7/53 (13%)
Frame = -1
Query: 292 ACFKCGKEGHWARQC----HYNAKNLKEVKTFS---SCFNCGLDDHWVRDCPS 155
+CFKCGKEGHWAR C YNA E ++ + SC+ CG HW RDCPS
Sbjct: 299 SCFKCGKEGHWARDCPAVPSYNAPVELEARSAASPGSCYKCGKPGHWARDCPS 351
>ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
gi|297321433|gb|EFH51854.1| zinc knuckle family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 62.0 bits (149), Expect = 1e-07
Identities = 38/154 (24%), Positives = 54/154 (35%), Gaps = 14/154 (9%)
Frame = -1
Query: 559 QGSCGYFRWCDEVDIPALSENMKASADNMRDEKMKVRINLNADLEGQSDEGCXXXXXXXX 380
+GSCG+F+WC+ DN + N++L G SD
Sbjct: 190 EGSCGFFKWCN---------------DNAVSSPTSYSVTKNSNL-GDSDTRGYQTAKTGA 233
Query: 379 XXLKTGSE-------RPXXXXXXXXXXXXXXXXXXSACFKCGKEGHWARQC-------HY 242
K G E C+KCGK+GHWA+ C +
Sbjct: 234 PCYKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSSGECYKCGKQGHWAKDCTGQSGDPQF 293
Query: 241 NAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNS 140
++ K + C+ CG HW RDC S Q +
Sbjct: 294 QSRQAKSTTSGGDCYKCGKPGHWARDCTSAAQTT 327
>dbj|BAE44472.1| Vasa [Botryllus primigenus]
Length = 687
Score = 60.1 bits (144), Expect = 4e-07
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
CFKCG+EGH +R C + + CF CG + H RDCP+ +S +
Sbjct: 79 CFKCGEEGHMSRDCPNGGGDSRP----KGCFKCGEEGHMSRDCPNGGGDSRPK-----GC 129
Query: 109 FSDDLEGDLIKDIPSNHQ---NSDNENFKSSKCFKCG 8
F EG + +D P+ + S + K S CFKCG
Sbjct: 130 FKCGEEGHMSRDCPNGGEGGSRSQGDRQKGSGCFKCG 166
>ref|XP_003874510.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490746|emb|CBZ26010.1| putative universal
minicircle sequence binding protein (UMSBP) [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 298
Score = 60.1 bits (144), Expect = 4e-07
Identities = 31/94 (32%), Positives = 51/94 (54%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
C CGKEGH+AR+C + K + S+CF CG + H R+CP++ ++ A +T
Sbjct: 18 CRNCGKEGHYAREC--PEADSKGDERSSTCFRCGEEGHMSRECPNEARSGAA---GAMTC 72
Query: 109 FSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F G + +D P++ + + F +C+KCG
Sbjct: 73 FRCGEAGHMSRDCPNSAKQGAAKGF---ECYKCG 103
>gb|ABM74410.1| vasa protein [Botrylloides violaceus]
Length = 630
Score = 59.7 bits (143), Expect = 5e-07
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
CFKCG+EGH +R C K CF CG + H RDCPS K
Sbjct: 43 CFKCGEEGHMSRDCPSGGGGGSRSK---GCFKCGEEGHMSRDCPSGGGGGSRSKGC---- 95
Query: 109 FSDDLEGDLIKDIPSNHQNSDNEN-----FKSSKCFKCG 8
F EG + +D P+ ++ + N +S+ C+KCG
Sbjct: 96 FKCGEEGHISRDCPNGQKSDFSRNGAGDCARSTACYKCG 134
>sp|Q04832.1|HEXP_LEIMA RecName: Full=DNA-binding protein HEXBP; AltName:
Full=Hexamer-binding protein gi|159342|gb|AAA29245.1|
HEXBP DNA binding protein [Leishmania major]
Length = 271
Score = 58.5 bits (140), Expect = 1e-06
Identities = 30/95 (31%), Positives = 52/95 (54%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLT 113
+C CGKEGH+AR+C + K + ++CF CG + H R+CP++ ++ A +T
Sbjct: 17 SCRNCGKEGHYAREC--PEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAA---GAMT 71
Query: 112 SFSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F G + +D P++ + + F +C+KCG
Sbjct: 72 CFRCGEAGHMSRDCPNSAKPGAAKGF---ECYKCG 103
>ref|XP_001686738.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin] gi|68129813|emb|CAJ09119.1|
putative universal minicircle sequence binding protein
[Leishmania major strain Friedlin]
Length = 271
Score = 58.5 bits (140), Expect = 1e-06
Identities = 30/95 (31%), Positives = 52/95 (54%)
Frame = -1
Query: 292 ACFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLT 113
+C CGKEGH+AR+C + K + ++CF CG + H R+CP++ ++ A +T
Sbjct: 17 SCRNCGKEGHYAREC--PEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAA---GAMT 71
Query: 112 SFSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKCG 8
F G + +D P++ + + F +C+KCG
Sbjct: 72 CFRCGEAGHMSRDCPNSAKPGAAKGF---ECYKCG 103
>ref|XP_004037407.1| universal minicircle sequence binding protein, putative
[Ichthyophthirius multifiliis]
gi|340507460|gb|EGR33421.1| universal minicircle
sequence binding protein, putative [Ichthyophthirius
multifiliis]
Length = 724
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/93 (35%), Positives = 47/93 (50%)
Frame = -1
Query: 289 CFKCGKEGHWARQCHYNAKNLKEVKTFSSCFNCGLDDHWVRDCPSKMQNSEARKNALLTS 110
CFKCG+EGH +R C + N +E K +SCFNCG H ++CP+ +K +
Sbjct: 305 CFKCGEEGHMSRDC--SNGNSREKKN-NSCFNCGEITHMSKECPN------PKKPRSIQC 355
Query: 109 FSDDLEGDLIKDIPSNHQNSDNENFKSSKCFKC 11
+ EG + KD P N+ + KCF C
Sbjct: 356 YKCQQEGHMAKDCP----NAQQYQARVMKCFLC 384
>ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
gi|241917628|gb|EER90772.1| hypothetical protein
SORBIDRAFT_01g005940 [Sorghum bicolor]
Length = 366
Score = 58.2 bits (139), Expect = 1e-06
Identities = 39/143 (27%), Positives = 57/143 (39%), Gaps = 9/143 (6%)
Frame = -1
Query: 556 GSCGYFRWCDEVDIPALSENMKASADNMRDEKMKVRINLNADLEGQSDEGCXXXXXXXXX 377
GSCG+F+WCDE + ++ + A + Q+D
Sbjct: 237 GSCGFFKWCDE-----------------QQPRVGAPLQQQASPQYQADS---------MS 270
Query: 376 XLKTGSERPXXXXXXXXXXXXXXXXXXSACFKCGKEGHWARQC------HYNAKNLKEVK 215
++ S+R +CFKCG+E HWAR C Y K + +
Sbjct: 271 SIQNPSQRSSS-----------------SCFKCGQENHWARDCPNQSSDPYPDKGGRPIT 313
Query: 214 TFSS---CFNCGLDDHWVRDCPS 155
+ SS C+NCG HW RDCP+
Sbjct: 314 SSSSPGACYNCGRPGHWSRDCPT 336
>ref|XP_006651886.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
Length = 300
Score = 57.4 bits (137), Expect = 2e-06
Identities = 42/164 (25%), Positives = 55/164 (33%), Gaps = 30/164 (18%)
Frame = -1
Query: 556 GSCGYFRWCDEVDIPALSENMKASADNMRDEKM-----------------KVRINLNADL 428
G C +F WCD A N +SA + D+ M K N+
Sbjct: 111 GGCNFFEWCDTPSSGAAPANGCSSAISQSDKSMPNMLCPCGAGACLFLTTKTGKNVGRQF 170
Query: 427 ----EGQSDEGCXXXXXXXXXXLKTGSERPXXXXXXXXXXXXXXXXXXSACFKCGKEGHW 260
Q C SACFKCG+E HW
Sbjct: 171 FRCPANQGGSSCGFFQWCDEQLRTAAQSSTQHHTDVASSGQIPSKRSSSACFKCGQENHW 230
Query: 259 ARQCHYNAKNL---KEVKTFSS------CFNCGLDDHWVRDCPS 155
A++C + + K +TF+S CF CG HW RDCP+
Sbjct: 231 AKECPNQSSDPYPDKGGRTFTSASSPDACFKCGKAGHWSRDCPT 274