BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00015485
         (603 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001759268.1| predicted protein [Physcomitrella patens] gi...   161   1e-37
ref|XP_006603873.1| PREDICTED: KH domain-containing protein At4g...   140   3e-31
ref|NP_001183640.1| hypothetical protein [Zea mays] gi|238013618...   140   3e-31
ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selag...   140   3e-31
ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Sela...   140   3e-31
ref|XP_006827300.1| hypothetical protein AMTR_s00010p00265700 [A...   139   5e-31
gb|ESW23237.1| hypothetical protein PHAVU_004G030100g [Phaseolus...   139   6e-31
ref|XP_004984228.1| PREDICTED: KH domain-containing protein At4g...   139   8e-31
ref|XP_006593679.1| PREDICTED: KH domain-containing protein At4g...   138   1e-30
emb|CBI19333.3| unnamed protein product [Vitis vinifera]              137   2e-30
ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selag...   137   2e-30
ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g...   137   2e-30
gb|EOY03515.1| RNA-binding KH domain-containing protein isoform ...   137   3e-30
gb|EOY03514.1| RNA-binding KH domain-containing protein isoform ...   137   3e-30
gb|EOY03512.1| RNA-binding KH domain-containing protein isoform ...   137   3e-30
gb|EOY03508.1| RNA-binding KH domain-containing protein isoform ...   137   3e-30
gb|EOY03507.1| RNA-binding KH domain-containing protein isoform ...   137   3e-30
ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatul...   137   3e-30
ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatul...   137   3e-30
ref|XP_004489406.1| PREDICTED: KH domain-containing protein At4g...   136   5e-30

>ref|XP_001759268.1| predicted protein [Physcomitrella patens]
           gi|162689581|gb|EDQ75952.1| predicted protein
           [Physcomitrella patens]
          Length = 427

 Score =  161 bits (407), Expect = 1e-37
 Identities = 89/187 (47%), Positives = 125/187 (66%), Gaps = 24/187 (12%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPD----- 278
           +VV+R+LCP  K G VIGK G II+ +RQ++GA+I I +A+ G +ERV++ISS D     
Sbjct: 2   DVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGNDR 61

Query: 279 ----DGDIGRVCPAQRALFEVHSRICGD------EGSGRRAD------TRILVPRCQIGC 410
               DG+   + PAQ ALF+VH+RI  D      +GS +  +      TR+LVP  QIGC
Sbjct: 62  GRGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIGC 121

Query: 411 LLGKGGKIMALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLR 581
           LLGKGGKI+  +RQ TGA +++LP    P  A P+DE+VQ+SG++  ++KAL  IS +L+
Sbjct: 122 LLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARLQ 181

Query: 582 VNPPKDR 602
            NPP+DR
Sbjct: 182 ENPPRDR 188



 Score =  130 bits (327), Expect = 3e-28
 Identities = 76/166 (45%), Positives = 106/166 (63%), Gaps = 6/166 (3%)
 Frame = +3

Query: 108 EGEVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPD-DG 284
           E E+V+R+LCP +K G VIGK G II  +R+ TGARI I  AV G++ERV+++S+ +  G
Sbjct: 257 ENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPG 316

Query: 285 DIGRVCPAQRALFEVHSRICGDEGSGRRA--DTRILVPRCQIGCLLGKGGKIMALLRQET 458
           D     PA  A+ +V SRI  + G  +     TR+LVP  QIGCLLGKGG I+  +R+ T
Sbjct: 317 D--SFSPALEAMIQVQSRITAEMGGDKDGIITTRLLVPTNQIGCLLGKGGSIIEDMRRAT 374

Query: 459 GAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
            A +++LP    P  A  +DE+VQI G+  V R+AL  +  +LR N
Sbjct: 375 RANIRVLPKDTLPRCALDTDELVQIVGDTTVAREALFQVISRLRNN 420


>ref|XP_006603873.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 548

 Score =  140 bits (353), Expect = 3e-31
 Identities = 80/179 (44%), Positives = 110/179 (61%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDD---- 281
           + VYR +CPG K G VIG+ G I++++R +T A+I I E V G EERVV I SP D    
Sbjct: 41  DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNA 100

Query: 282 --GDIGRVCPAQRALFEVHSRICG-------DEGSGRRADTRILVPRCQIGCLLGKGGKI 434
             G    V PAQ ALF+VH R+         D+  G++   ++LVP  QIGC++GKGG I
Sbjct: 101 VEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R ETGA ++IL     P  A  SDE+VQI+G+  VV+KAL  I+ +L  NP + +
Sbjct: 161 VQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQ 219



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 61/165 (36%), Positives = 95/165 (57%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G+II +IRQ++GA I +  +    +E ++ IS+ +  +  
Sbjct: 282 EFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFE-E 340

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LVP  +IGCL+GKGG I+  +R+ T 
Sbjct: 341 TFSPTIEAAVRLQPR-CSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 399

Query: 462 AYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++I+     P  A   DE+VQISG+LD+ + AL ++  +LR N
Sbjct: 400 ANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHVLTRLRAN 444


>ref|NP_001183640.1| hypothetical protein [Zea mays] gi|238013618|gb|ACR37844.1| unknown
           [Zea mays] gi|414867002|tpg|DAA45559.1| TPA:
           hypothetical protein ZEAMMB73_773291 [Zea mays]
           gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein
           ZEAMMB73_773291 [Zea mays] gi|414867004|tpg|DAA45561.1|
           TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
          Length = 541

 Score =  140 bits (353), Expect = 3e-31
 Identities = 80/180 (44%), Positives = 107/180 (59%), Gaps = 17/180 (9%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPD----- 278
           + VYR LC   K G +IG+ G I +++R +T A+I I E+V G +ERVV I S       
Sbjct: 37  DTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNT 96

Query: 279 -DGDIGRVCPAQRALFEVHSRICGDEGSGR--------RADTRILVPRCQIGCLLGKGGK 431
            DG    VCPAQ ALF VH R+  DEG G         +   R+LVP  QIGC++GKGG+
Sbjct: 97  IDGAEDEVCPAQDALFRVHERLASDEGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGGQ 156

Query: 432 IMALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           I+  +R ETGA +++L     P  A   DE++QISG+  VVRKAL  +S +L  NP K +
Sbjct: 157 IIQGIRSETGAQIRVLSNDHIPACAISGDELLQISGDTVVVRKALHQVSSRLHNNPSKSQ 216



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R+LC     G VIGK G II++IRQ++GA I +  +    ++  ++  S  +    
Sbjct: 277 EFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFED 336

Query: 294 RVCPAQRALFEVHSRICGDEGSGRRAD----TRILVPRCQIGCLLGKGGKIMALLRQETG 461
            V P   A   +  R C ++     A+    TR+LV   +IGCL+GKGG I+  +R+ + 
Sbjct: 337 PVSPTIDAAVRLQPR-CSEKSDLESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSR 395

Query: 462 AYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A V+IL     P  A   DE+VQI+G LDV R AL  I+ +L+ N
Sbjct: 396 ANVRILSKENVPKVAAEDDEMVQITGGLDVARNALVQIATRLKAN 440


>ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
           gi|300165100|gb|EFJ31708.1| hypothetical protein
           SELMODRAFT_87147 [Selaginella moellendorffii]
          Length = 506

 Score =  140 bits (352), Expect = 3e-31
 Identities = 83/194 (42%), Positives = 116/194 (59%), Gaps = 31/194 (15%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISS------- 272
           +VVYR+LCPG K G VIGK G II+ +R +TGA+I + + + G++ERV+ IS+       
Sbjct: 45  DVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERRE 104

Query: 273 --------------PDDGDIGRVCPA-QRALFEVHSRIC------GDEGSGRRADTRILV 389
                           +G+     PA Q ALF+V +RI        DE S R    R+LV
Sbjct: 105 GKPRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRNVTARLLV 164

Query: 390 PRCQIGCLLGKGGKIMALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALR 560
           P  QIGCLLGK GKI+  +R E+GA +++LP    P  A  +DE+VQ++GEL +V+KAL 
Sbjct: 165 PSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDELVQLTGELALVKKALT 224

Query: 561 NISDKLRVNPPKDR 602
            IS +L  NPP+D+
Sbjct: 225 TISTRLYDNPPRDK 238



 Score =  118 bits (296), Expect = 1e-24
 Identities = 73/164 (44%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
 Frame = +3

Query: 108 EGEVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGD 287
           EGE   R+LCP EK G VIGK G+II+ IR++T ARI I +AV   EERV+ I+S ++  
Sbjct: 276 EGEFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITS-NEVL 334

Query: 288 IGRVCPAQRALFEVHSRICGDEGSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETGA 464
             +V PA  A+ ++ SRI         A  TR LVP   IGCLLGK G I+A +R+ T A
Sbjct: 335 HEQVSPALEAVLQLQSRISDPSAEKDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRA 394

Query: 465 YVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
            +++L     P  A   DE+VQ+ G++ V R A+  I  +LR N
Sbjct: 395 NIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRAN 438


>ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
           gi|300148549|gb|EFJ15208.1| hypothetical protein
           SELMODRAFT_445677 [Selaginella moellendorffii]
          Length = 668

 Score =  140 bits (352), Expect = 3e-31
 Identities = 88/215 (40%), Positives = 121/215 (56%), Gaps = 48/215 (22%)
 Frame = +3

Query: 102 QAEGEVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPD- 278
           Q + E ++R+LCP  + G VIGK G II+ +RQQTGA+I I +A+ G++ERV++I + D 
Sbjct: 55  QQQQEELFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDA 114

Query: 279 ----DGDI------------------------GR--VCPAQRALFEVHSRICG------- 347
               D D                         GR   CPAQ ALF+VHSRI         
Sbjct: 115 EGGGDEDYPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDD 174

Query: 348 -------DEGSGRRADTRILVPRCQIGCLLGKGGKIMALLRQETGAYVKILP---APDYA 497
                  +E    +  TR+LVP  Q+GCLLGK G+I+  +R+ETG+ ++ILP    P  A
Sbjct: 175 LDDSDSVEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCA 234

Query: 498 PPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
            P+DEVVQ+ G+   V++AL  IS +L  NPPKDR
Sbjct: 235 LPTDEVVQVVGDRPSVKRALNAISTRLLDNPPKDR 269



 Score =  128 bits (321), Expect = 1e-27
 Identities = 73/165 (44%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVIS---SPDDG 284
           E+V+R+LCP EK G +IGK    IQ ++++TGA+I + +AV G EERV+++S   SPDD 
Sbjct: 346 ELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDD 402

Query: 285 DIGRVCPAQRALFEVHSRICGDEG-SGRRADTRILVPRCQIGCLLGKGGKIMALLRQETG 461
               + PAQ A+F +  ++  D G +  R  TR+LVP   +GCLLGKGG I++ +R  T 
Sbjct: 403 ----LSPAQEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTR 458

Query: 462 AYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A +++L     P  A  +DEVVQ+ GE+ V R AL  I+ +LR N
Sbjct: 459 AIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRAN 503


>ref|XP_006827300.1| hypothetical protein AMTR_s00010p00265700 [Amborella trichopoda]
           gi|548831729|gb|ERM94537.1| hypothetical protein
           AMTR_s00010p00265700 [Amborella trichopoda]
          Length = 548

 Score =  139 bits (351), Expect = 5e-31
 Identities = 77/182 (42%), Positives = 109/182 (59%), Gaps = 19/182 (10%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + VYR LCP +K G +IGK G I++ +R ++ ++I I E + G EER+V I S       
Sbjct: 69  DTVYRYLCPAKKIGSIIGKGGEIVKTLRAESQSKIRIGETIHGCEERIVTIFSSRMRNQA 128

Query: 276 --DDGDIGRVCPAQRALFEVHSRICGDEGSGRRAD--------TRILVPRCQIGCLLGKG 425
             D+  +  +C AQ ALF VH R+  DE  G   D         R+LVP  QIGC++GKG
Sbjct: 129 TYDESGLEFMCSAQDALFRVHDRLLADETPGEEGDDTNSQNVTARLLVPADQIGCIIGKG 188

Query: 426 GKIMALLRQETGAYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPK 596
           G+I+  +R ETGA+++IL     P  A  SDE++QISG+  VVRKAL  +S +L  NP +
Sbjct: 189 GQIIQNMRSETGAHIRILKNEQLPLCAMASDELLQISGDASVVRKALYQVSSRLHENPSR 248

Query: 597 DR 602
            +
Sbjct: 249 SQ 250



 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
 Frame = +3

Query: 126 RMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPD--DGDIGRV 299
           R++CP    G VIGK G+II++IRQ++GA I +       ++ V+ +S+ +  D      
Sbjct: 310 RLVCPSSHIGGVIGKGGVIIKQIRQESGAFIKVESNNAEGDDCVIAVSAKEYFDDPFSPT 369

Query: 300 CPAQRALFEVHSRICGDEGSGRRADTRILVPRCQIGCLLGKGGKIMALLRQETGAYVKIL 479
             A   L    S     E       TR+LVP  +IGCL+GKGG I++ +R+ T A ++I 
Sbjct: 370 IDAAVRLQPKCSEKTERESGEPSFTTRLLVPSSRIGCLIGKGGSIISEMRKMTRANIRIF 429

Query: 480 P---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
                P  A   DE+VQISGELDV R AL  ++ +L+ N
Sbjct: 430 SKENLPKVASEDDEMVQISGELDVARNALIQVATRLKAN 468


>gb|ESW23237.1| hypothetical protein PHAVU_004G030100g [Phaseolus vulgaris]
          Length = 548

 Score =  139 bits (350), Expect = 6e-31
 Identities = 78/179 (43%), Positives = 111/179 (62%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDD---- 281
           + V+R +CPG K G VIG+ G I++++R +T A+I I E V G +ERVV I SP D    
Sbjct: 41  DTVFRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTIYSPSDETNS 100

Query: 282 --GDIGRVCPAQRALFEVHSRICG-------DEGSGRRADTRILVPRCQIGCLLGKGGKI 434
             G    V PAQ ALF+VH R+         D+  G++   ++LVP  QIGC++GKGG+I
Sbjct: 101 VEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGQI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R ETGA ++IL     P  A  SDE+VQI+G+  VVRKAL  ++ +L  NP + +
Sbjct: 161 VQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDAAVVRKALHQVASRLHDNPSRSQ 219



 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G+II +IRQ +GA I +  +    EE ++ I + +  +  
Sbjct: 282 EFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSSTEGEECLITILTKEFFE-E 340

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LV   +IGCL+GKGG I+  +R+ T 
Sbjct: 341 TFSPTIEAAVRLQPR-CSEKVERDSGIISFTTRLLVSTSRIGCLIGKGGSIITEMRRLTK 399

Query: 462 AYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++++     P  A   DE+VQISG+LDV ++AL ++  +LR N
Sbjct: 400 ANIRVISKENLPKIASEDDEMVQISGDLDVAKEALVHVLTRLRAN 444


>ref|XP_004984228.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Setaria italica] gi|514819059|ref|XP_004984229.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Setaria italica]
           gi|514819061|ref|XP_004984230.1| PREDICTED: KH
           domain-containing protein At4g18375-like isoform X3
           [Setaria italica] gi|514819063|ref|XP_004984231.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X4 [Setaria italica]
          Length = 541

 Score =  139 bits (349), Expect = 8e-31
 Identities = 80/181 (44%), Positives = 108/181 (59%), Gaps = 18/181 (9%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + VYR LC   K G +IG+ G I +++R +T A+I I E+V G EERV+ I S       
Sbjct: 37  DTVYRYLCASRKIGSIIGRGGEIAKQLRAETQAKIRIGESVPGCEERVITIFSSSRETNT 96

Query: 276 -DDGDIGRVCPAQRALFEVHSRICGDEGSGR--------RADTRILVPRCQIGCLLGKGG 428
            DD +  +VCPAQ ALF VH R+  DEG G         +   R+LVP  QIGC++GKGG
Sbjct: 97  IDDAE-DKVCPAQDALFRVHERLASDEGPGNEDSEEVLPQVTVRLLVPSDQIGCIIGKGG 155

Query: 429 KIMALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKD 599
            I+  +R ETGA +++L     P  A   DE++QISG+  VVRKAL  +S +L  NP K 
Sbjct: 156 HIIQGIRSETGAQIRVLSNDHIPACAINGDELLQISGDAVVVRKALHQVSSRLHDNPSKS 215

Query: 600 R 602
           +
Sbjct: 216 Q 216



 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R+LC     G VIGK G II++IRQ++GA I +  +  G E+  ++  S  +    
Sbjct: 277 EFSLRLLCAAANVGGVIGKGGGIIKQIRQESGAFIKVDSSNSGAEDDCIITVSAKEFFED 336

Query: 294 RVCPAQRALFEVHSRICGDEGSGRRAD----TRILVPRCQIGCLLGKGGKIMALLRQETG 461
            V P   A   +  R C ++     A+    TR+LV   +IGCL+GKGG I+  +R+ + 
Sbjct: 337 PVSPTIDAAIRLQPR-CSEKSDAESAEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRHSR 395

Query: 462 AYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++IL     P  A   +E+VQISG LDV R AL  I+ +L+ N
Sbjct: 396 ANIRILSKENVPKVAAEDEEMVQISGGLDVARHALLQIAARLKAN 440


>ref|XP_006593679.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Glycine max] gi|571496686|ref|XP_006593680.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Glycine max]
           gi|571496688|ref|XP_006593681.1| PREDICTED: KH
           domain-containing protein At4g18375-like isoform X3
           [Glycine max]
          Length = 548

 Score =  138 bits (347), Expect = 1e-30
 Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDD---- 281
           + VYR +CPG K G VIG+ G I++++R +T A+I I E V G EERVV I  P D    
Sbjct: 41  DTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNA 100

Query: 282 --GDIGRVCPAQRALFEVHSRICG-------DEGSGRRADTRILVPRCQIGCLLGKGGKI 434
             G    V PAQ ALF+VH R+         D+  G++   ++LVP  QIGC++GKGG I
Sbjct: 101 VEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R ETGA ++IL     P  A  SDE+VQI+G+  VV+KAL  I+ +L  NP + +
Sbjct: 161 VQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQ 219



 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G+II +IRQ +GA I +  +    +E ++ IS+ +  +  
Sbjct: 282 EFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFE-E 340

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LVP  +IGCL+GKGG I+  +R+ T 
Sbjct: 341 TFSPTIEAAVRLQPR-CSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTK 399

Query: 462 AYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++I+     P  A   DE+VQISG+LDV + AL ++  +LR N
Sbjct: 400 ANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVLTRLRAN 444


>emb|CBI19333.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  137 bits (346), Expect = 2e-30
 Identities = 81/190 (42%), Positives = 112/190 (58%), Gaps = 27/190 (14%)
 Frame = +3

Query: 111 GEVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVI-------- 266
           G VV+R+LCP  K G VIGK G II +IRQ+TG ++ + E V G +ERVV+I        
Sbjct: 43  GTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTE 102

Query: 267 -----SSPDDGDIGR-VCPAQRALFEVHSRIC--------GDEGSGRRAD--TRILVPRC 398
                S  DD  + + +   Q+AL  V  R+         GDE S +      R+LV   
Sbjct: 103 ADNEQSKEDDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSS 162

Query: 399 QIGCLLGKGGKIMALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNIS 569
           Q+GCLLGKGG ++  +  E+GA ++ILP    P  A PSDE+VQI+GELD  ++AL++IS
Sbjct: 163 QVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSIS 222

Query: 570 DKLRVNPPKD 599
            +L  NPP+D
Sbjct: 223 QQLLENPPRD 232



 Score =  114 bits (286), Expect = 2e-23
 Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 8/163 (4%)
 Frame = +3

Query: 117 VVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISS---PDDGD 287
           + +R+LC  E+ G +IGK G II+ ++ +TG  I + + V  +E+RV+ IS    PDD  
Sbjct: 306 LTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDD-- 363

Query: 288 IGRVCPAQRALFEVHSRICG--DEGSGRRADTRILVPRCQIGCLLGKGGKIMALLRQETG 461
             R+ PAQ A+  V SRI     +   +    R+LV   QIGCLLGKGG I+A +R+ +G
Sbjct: 364 --RISPAQDAVLRVQSRIVRAIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSG 421

Query: 462 AYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLR 581
           A+++IL     P  A  ++EVVQI+GE + V++AL  I+ +LR
Sbjct: 422 AHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLR 464


>ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
           gi|300143144|gb|EFJ09837.1| hypothetical protein
           SELMODRAFT_10869 [Selaginella moellendorffii]
          Length = 630

 Score =  137 bits (345), Expect = 2e-30
 Identities = 86/209 (41%), Positives = 118/209 (56%), Gaps = 48/209 (22%)
 Frame = +3

Query: 120 VYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPD-----DG 284
           ++R+LCP  + G VIGK G II+ +RQQTGA+I I +A+ G++ERV++I + D     D 
Sbjct: 1   LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60

Query: 285 DI------------------------GR--VCPAQRALFEVHSRICG------------- 347
           D                         GR   CPAQ ALF+VHSRI               
Sbjct: 61  DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDS 120

Query: 348 -DEGSGRRADTRILVPRCQIGCLLGKGGKIMALLRQETGAYVKILP---APDYAPPSDEV 515
            +E    +  TR+LVP  Q+GCLLGK G+I+  +R+ETG+ ++ILP    P  A P+DEV
Sbjct: 121 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEV 180

Query: 516 VQISGELDVVRKALRNISDKLRVNPPKDR 602
           VQ+ G+   V++AL  IS +L  NPPKDR
Sbjct: 181 VQVVGDRPSVKRALNAISTRLLDNPPKDR 209



 Score =  128 bits (321), Expect = 1e-27
 Identities = 73/165 (44%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVIS---SPDDG 284
           E+V+R+LCP EK G +IGK    IQ ++++TGA+I + +AV G EERV+++S   SPDD 
Sbjct: 286 ELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDD 342

Query: 285 DIGRVCPAQRALFEVHSRICGDEG-SGRRADTRILVPRCQIGCLLGKGGKIMALLRQETG 461
               + PAQ A+F +  ++  D G +  R  TR+LVP   +GCLLGKGG I++ +R  T 
Sbjct: 343 ----LSPAQEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTR 398

Query: 462 AYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A +++L     P  A  +DEVVQ+ GE+ V R AL  I+ +LR N
Sbjct: 399 AIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRAN 443


>ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
           gi|296082939|emb|CBI22240.3| unnamed protein product
           [Vitis vinifera]
          Length = 548

 Score =  137 bits (345), Expect = 2e-30
 Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + VYR LCPG K G +IG+ G I++++R  T ++I I E V G EERVV I S       
Sbjct: 42  DTVYRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNA 101

Query: 276 -DDGDIGRVCPAQRALFEVHSRICGDEGSGRRAD------TRILVPRCQIGCLLGKGGKI 434
            DD D   V PAQ ALF VH R+  +E  G  ++       R+LVP  QIGC++GKGG+I
Sbjct: 102 FDDSDT-FVSPAQDALFRVHDRVVSEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKGGQI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R E+GA V+IL     P  A  SDE+VQISGE  +VRKAL  I+ +L  NP + +
Sbjct: 161 IQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQ 219



 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G+II +IRQ++GA I +        +  ++  S  +    
Sbjct: 281 EFSLRLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFED 340

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LVP  +IGCL+GKGG I+  +R+ T 
Sbjct: 341 TFSPTIEAAVRLQPR-CSEKVERDSGIVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTK 399

Query: 462 AYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++IL     P  A   DE+VQI+G+LDV + AL  ++ +LR N
Sbjct: 400 ANIRILSKENLPKVASEDDEMVQIAGDLDVAKDALIQVTTRLRAN 444


>gb|EOY03515.1| RNA-binding KH domain-containing protein isoform 9, partial
           [Theobroma cacao]
          Length = 526

 Score =  137 bits (344), Expect = 3e-30
 Identities = 81/179 (45%), Positives = 112/179 (62%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + VYR LCP  K G +IG+ G I++++R +T ++I I E V G+EERVV I S       
Sbjct: 42  DTVYRYLCPVRKIGSIIGRGGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNA 101

Query: 276 -DDGDIGRVCPAQRALFEVHSRIC-----GDEGS-GRRADTRILVPRCQIGCLLGKGGKI 434
            +DG+   V PAQ ALF VH ++      GDE S G +   R+LVP  QIGC++GKGG+I
Sbjct: 102 LEDGN-NFVSPAQDALFRVHDKVVAEDLHGDEDSEGHQVTARLLVPSDQIGCVIGKGGQI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R ETGA ++IL     P  A  +DE+VQISGE  VV+KAL  I+ +L  NP + +
Sbjct: 161 VQNIRSETGAQIRILKDEHLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSRSQ 219



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G II +IRQ++GA I +  +    ++ ++ +S+ +  +  
Sbjct: 281 EFSLRLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITVSAKEFFE-D 339

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LVP  +IGCL+GKGG I+  +R+ T 
Sbjct: 340 TYSPTIEAAVRLQPR-CSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTEMRRITK 398

Query: 462 AYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++IL     P  A   DE+VQI+G+LDV + AL  I+ +LR N
Sbjct: 399 ANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>gb|EOY03514.1| RNA-binding KH domain-containing protein isoform 8, partial
           [Theobroma cacao]
          Length = 537

 Score =  137 bits (344), Expect = 3e-30
 Identities = 81/179 (45%), Positives = 112/179 (62%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + VYR LCP  K G +IG+ G I++++R +T ++I I E V G+EERVV I S       
Sbjct: 42  DTVYRYLCPVRKIGSIIGRGGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNA 101

Query: 276 -DDGDIGRVCPAQRALFEVHSRIC-----GDEGS-GRRADTRILVPRCQIGCLLGKGGKI 434
            +DG+   V PAQ ALF VH ++      GDE S G +   R+LVP  QIGC++GKGG+I
Sbjct: 102 LEDGN-NFVSPAQDALFRVHDKVVAEDLHGDEDSEGHQVTARLLVPSDQIGCVIGKGGQI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R ETGA ++IL     P  A  +DE+VQISGE  VV+KAL  I+ +L  NP + +
Sbjct: 161 VQNIRSETGAQIRILKDEHLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSRSQ 219



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G II +IRQ++GA I +  +    ++ ++ +S+ +  +  
Sbjct: 281 EFSLRLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITVSAKEFFE-D 339

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LVP  +IGCL+GKGG I+  +R+ T 
Sbjct: 340 TYSPTIEAAVRLQPR-CSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTEMRRITK 398

Query: 462 AYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++IL     P  A   DE+VQI+G+LDV + AL  I+ +LR N
Sbjct: 399 ANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>gb|EOY03512.1| RNA-binding KH domain-containing protein isoform 6 [Theobroma
           cacao] gi|508711616|gb|EOY03513.1| RNA-binding KH
           domain-containing protein isoform 6 [Theobroma cacao]
          Length = 548

 Score =  137 bits (344), Expect = 3e-30
 Identities = 81/179 (45%), Positives = 112/179 (62%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + VYR LCP  K G +IG+ G I++++R +T ++I I E V G+EERVV I S       
Sbjct: 42  DTVYRYLCPVRKIGSIIGRGGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNA 101

Query: 276 -DDGDIGRVCPAQRALFEVHSRIC-----GDEGS-GRRADTRILVPRCQIGCLLGKGGKI 434
            +DG+   V PAQ ALF VH ++      GDE S G +   R+LVP  QIGC++GKGG+I
Sbjct: 102 LEDGN-NFVSPAQDALFRVHDKVVAEDLHGDEDSEGHQVTARLLVPSDQIGCVIGKGGQI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R ETGA ++IL     P  A  +DE+VQISGE  VV+KAL  I+ +L  NP + +
Sbjct: 161 VQNIRSETGAQIRILKDEHLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSRSQ 219



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G II +IRQ++GA I +  +    ++ ++ +S+ +  +  
Sbjct: 281 EFSLRLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITVSAKEFFE-D 339

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LVP  +IGCL+GKGG I+  +R+ T 
Sbjct: 340 TYSPTIEAAVRLQPR-CSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTEMRRITK 398

Query: 462 AYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++IL     P  A   DE+VQI+G+LDV + AL  I+ +LR N
Sbjct: 399 ANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>gb|EOY03508.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma
           cacao]
          Length = 542

 Score =  137 bits (344), Expect = 3e-30
 Identities = 81/179 (45%), Positives = 112/179 (62%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + VYR LCP  K G +IG+ G I++++R +T ++I I E V G+EERVV I S       
Sbjct: 42  DTVYRYLCPVRKIGSIIGRGGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNA 101

Query: 276 -DDGDIGRVCPAQRALFEVHSRIC-----GDEGS-GRRADTRILVPRCQIGCLLGKGGKI 434
            +DG+   V PAQ ALF VH ++      GDE S G +   R+LVP  QIGC++GKGG+I
Sbjct: 102 LEDGN-NFVSPAQDALFRVHDKVVAEDLHGDEDSEGHQVTARLLVPSDQIGCVIGKGGQI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R ETGA ++IL     P  A  +DE+VQISGE  VV+KAL  I+ +L  NP + +
Sbjct: 161 VQNIRSETGAQIRILKDEHLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSRSQ 219



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G II +IRQ++GA I +  +    ++ ++ +S+ +  +  
Sbjct: 281 EFSLRLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITVSAKEFFE-D 339

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LVP  +IGCL+GKGG I+  +R+ T 
Sbjct: 340 TYSPTIEAAVRLQPR-CSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTEMRRITK 398

Query: 462 AYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++IL     P  A   DE+VQI+G+LDV + AL  I+ +LR N
Sbjct: 399 ANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>gb|EOY03507.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
           cacao] gi|508711612|gb|EOY03509.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
           gi|508711614|gb|EOY03511.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
          Length = 547

 Score =  137 bits (344), Expect = 3e-30
 Identities = 81/179 (45%), Positives = 112/179 (62%), Gaps = 16/179 (8%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + VYR LCP  K G +IG+ G I++++R +T ++I I E V G+EERVV I S       
Sbjct: 42  DTVYRYLCPVRKIGSIIGRGGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNA 101

Query: 276 -DDGDIGRVCPAQRALFEVHSRIC-----GDEGS-GRRADTRILVPRCQIGCLLGKGGKI 434
            +DG+   V PAQ ALF VH ++      GDE S G +   R+LVP  QIGC++GKGG+I
Sbjct: 102 LEDGN-NFVSPAQDALFRVHDKVVAEDLHGDEDSEGHQVTARLLVPSDQIGCVIGKGGQI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPKDR 602
           +  +R ETGA ++IL     P  A  +DE+VQISGE  VV+KAL  I+ +L  NP + +
Sbjct: 161 VQNIRSETGAQIRILKDEHLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSRSQ 219



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G II +IRQ++GA I +  +    ++ ++ +S+ +  +  
Sbjct: 281 EFSLRLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITVSAKEFFE-D 339

Query: 294 RVCPAQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++    SG  +  TR+LVP  +IGCL+GKGG I+  +R+ T 
Sbjct: 340 TYSPTIEAAVRLQPR-CSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTEMRRITK 398

Query: 462 AYVKIL---PAPDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           A ++IL     P  A   DE+VQI+G+LDV + AL  I+ +LR N
Sbjct: 399 ANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
           gi|355493538|gb|AES74741.1| Poly(rC)-binding protein
           [Medicago truncatula]
          Length = 569

 Score =  137 bits (344), Expect = 3e-30
 Identities = 79/178 (44%), Positives = 111/178 (62%), Gaps = 17/178 (9%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + V+R LCPG K G +IG+ G I++++R +T A+I I E V G +ERVV + S       
Sbjct: 46  DTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNT 105

Query: 276 -DDGDIGRVCPAQRALFEVHSRICG-------DEGSGRRADTRILVPRCQIGCLLGKGGK 431
            DDGD   V PA+ ALF++H R+         +E  G + + ++LVP  QIGC+LGKGG+
Sbjct: 106 VDDGD-KLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164

Query: 432 IMALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPK 596
           I+  LR ETGA ++IL     P  A  SDE+VQISG+  VV+KAL  I+ +L  NP +
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSR 222



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 59/165 (35%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G II +IRQ +GA I +  + +G ++ ++ IS+ +  +  
Sbjct: 288 EFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFE-E 345

Query: 294 RVCPAQRALFEVHSRICGDEGSGRRA----DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++           TR+LV   +IGCL+GKGG I+  +R+ T 
Sbjct: 346 TFSPTVEAAVLLQPR-CSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTK 404

Query: 462 AYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           + ++IL     P  A   DE+VQISG+LDV + AL  +  +LR N
Sbjct: 405 SNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRAN 449


>ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
           gi|355493539|gb|AES74742.1| Poly(rC)-binding protein
           [Medicago truncatula]
          Length = 553

 Score =  137 bits (344), Expect = 3e-30
 Identities = 79/178 (44%), Positives = 111/178 (62%), Gaps = 17/178 (9%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSP------ 275
           + V+R LCPG K G +IG+ G I++++R +T A+I I E V G +ERVV + S       
Sbjct: 46  DTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNT 105

Query: 276 -DDGDIGRVCPAQRALFEVHSRICG-------DEGSGRRADTRILVPRCQIGCLLGKGGK 431
            DDGD   V PA+ ALF++H R+         +E  G + + ++LVP  QIGC+LGKGG+
Sbjct: 106 VDDGD-KLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164

Query: 432 IMALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPK 596
           I+  LR ETGA ++IL     P  A  SDE+VQISG+  VV+KAL  I+ +L  NP +
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSR 222



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 59/165 (35%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIG 293
           E   R++CP    G VIGK G II +IRQ +GA I +  + +G ++ ++ IS+ +  +  
Sbjct: 288 EFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFE-E 345

Query: 294 RVCPAQRALFEVHSRICGDEGSGRRA----DTRILVPRCQIGCLLGKGGKIMALLRQETG 461
              P   A   +  R C ++           TR+LV   +IGCL+GKGG I+  +R+ T 
Sbjct: 346 TFSPTVEAAVLLQPR-CSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTK 404

Query: 462 AYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           + ++IL     P  A   DE+VQISG+LDV + AL  +  +LR N
Sbjct: 405 SNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRAN 449


>ref|XP_004489406.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Cicer arietinum] gi|502090992|ref|XP_004489407.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Cicer arietinum]
           gi|502090995|ref|XP_004489408.1| PREDICTED: KH
           domain-containing protein At4g18375-like isoform X3
           [Cicer arietinum]
          Length = 548

 Score =  136 bits (342), Expect = 5e-30
 Identities = 76/177 (42%), Positives = 112/177 (63%), Gaps = 16/177 (9%)
 Frame = +3

Query: 114 EVVYRMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDD---- 281
           + V+R LCPG K G +IG+ G I++++R +T A+I I E V G +ERVV + S  D    
Sbjct: 41  DTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNA 100

Query: 282 -GDIGR-VCPAQRALFEVHSRICG-------DEGSGRRADTRILVPRCQIGCLLGKGGKI 434
             D G+ V PA+ ALF++H R+         ++ +G +   ++LVP  QIGC+LGKGG+I
Sbjct: 101 LDDGGKHVSPAEDALFKIHDRVVAEDLHSDQEDEAGPQVTAKLLVPSDQIGCVLGKGGQI 160

Query: 435 MALLRQETGAYVKILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVNPPK 596
           +  +R ETGA ++IL     P  A  SDE+VQISG+  VV+KAL  I+ +L +NP +
Sbjct: 161 VQSIRNETGAQIRILKDEHVPPCALSSDELVQISGDAAVVKKALHQIASRLHLNPSR 217



 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 61/161 (37%), Positives = 93/161 (57%), Gaps = 7/161 (4%)
 Frame = +3

Query: 126 RMLCPGEKAGKVIGKNGIIIQEIRQQTGARITIHEAVRGTEERVVVISSPDDGDIGRVCP 305
           R++CP    G VIGK G II +IRQ +GA I +  + +G +E ++ IS+ +  +     P
Sbjct: 286 RLVCPTGNIGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DECLITISTKEFFE-ETFSP 343

Query: 306 AQRALFEVHSRICGDE---GSGRRA-DTRILVPRCQIGCLLGKGGKIMALLRQETGAYVK 473
              A   +  R C ++    SG  +  TR+LV   +IGCL+GKGG I+  +R+ T + ++
Sbjct: 344 TIEAAVRLQPR-CSEKIERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIR 402

Query: 474 ILP---APDYAPPSDEVVQISGELDVVRKALRNISDKLRVN 587
           IL     P  A   DE+VQISG+LDV + AL ++  +LR N
Sbjct: 403 ILSKENLPKIASEDDEMVQISGDLDVAKDALVHVLTRLRAN 443