BLASTX nr result

ID: Ephedra26_contig00015362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00015362
         (416 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG45573.1| hypothetical protein 2_5221_01, partial [Pinus ta...    60   4e-07
gb|AFG45564.1| hypothetical protein 2_5221_01, partial [Pinus ta...    60   4e-07
gb|AEW08279.1| hypothetical protein 2_5221_01, partial [Pinus ra...    60   4e-07

>gb|AFG45573.1| hypothetical protein 2_5221_01, partial [Pinus taeda]
           gi|383129725|gb|AFG45581.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
          Length = 134

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = -2

Query: 223 EDQDSQVDYVKEILLSSGLLSKDHSFLGS-SHELRDFSLSPGLFHILEQKRIRKFEYSTK 47
           + Q  +  YVKEILL+SG+L  D   + + S     F ++P LFH+LEQ+R  ++  S +
Sbjct: 20  QGQTPEYKYVKEILLASGILFIDTDSISTDSFHASGFPINPELFHVLEQRRASQYRISAE 79

Query: 46  HCQDRVNRKLLFDSV 2
           + Q++ NR L+FD+V
Sbjct: 80  YIQEKHNRHLMFDTV 94


>gb|AFG45564.1| hypothetical protein 2_5221_01, partial [Pinus taeda]
           gi|383129699|gb|AFG45568.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129711|gb|AFG45574.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129719|gb|AFG45578.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
          Length = 134

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = -2

Query: 223 EDQDSQVDYVKEILLSSGLLSKDHSFLGS-SHELRDFSLSPGLFHILEQKRIRKFEYSTK 47
           + Q  +  YVKEILL+SG+L  D   + + S     F ++P LFH+LEQ+R  ++  S +
Sbjct: 20  QGQTPEYKYVKEILLASGILFIDTDSISTDSFHASGFPINPELFHVLEQRRASQYRISAE 79

Query: 46  HCQDRVNRKLLFDSV 2
           + Q++ NR L+FD+V
Sbjct: 80  YIQEKHNRHLMFDTV 94


>gb|AEW08279.1| hypothetical protein 2_5221_01, partial [Pinus radiata]
           gi|383129693|gb|AFG45565.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129695|gb|AFG45566.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129697|gb|AFG45567.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129701|gb|AFG45569.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129703|gb|AFG45570.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129705|gb|AFG45571.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129707|gb|AFG45572.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129713|gb|AFG45575.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129715|gb|AFG45576.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129717|gb|AFG45577.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129721|gb|AFG45579.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
           gi|383129723|gb|AFG45580.1| hypothetical protein
           2_5221_01, partial [Pinus taeda]
          Length = 134

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = -2

Query: 223 EDQDSQVDYVKEILLSSGLLSKDHSFLGS-SHELRDFSLSPGLFHILEQKRIRKFEYSTK 47
           + Q  +  YVKEILL+SG+L  D   + + S     F ++P LFH+LEQ+R  ++  S +
Sbjct: 20  QGQTPEYKYVKEILLASGILFIDTDSISTDSFHASGFPINPELFHVLEQRRASQYRISAE 79

Query: 46  HCQDRVNRKLLFDSV 2
           + Q++ NR L+FD+V
Sbjct: 80  YIQEKHNRHLMFDTV 94


Top