BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00015326
         (2750 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt...   721   0.0  
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no...   713   0.0  
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt...   712   0.0  
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   711   0.0  
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   707   0.0  
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   706   0.0  
gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [...   705   0.0  
gb|ESW19147.1| hypothetical protein PHAVU_006G100200g [Phaseolus...   703   0.0  
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt...   702   0.0  
gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus pe...   702   0.0  
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt...   701   0.0  
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt...   701   0.0  
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   699   0.0  
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              692   0.0  
gb|EOY11113.1| Pseudouridine synthase family protein, putative i...   689   0.0  
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   687   0.0  
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr...   686   0.0  
ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synt...   684   0.0  
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...   684   0.0  
ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synt...   682   0.0  

>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  721 bits (1860), Expect = 0.0
 Identities = 389/739 (52%), Positives = 496/739 (67%), Gaps = 33/739 (4%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            +E++VGI CY + +PGFRGILKQRY+DF+VNEVD EGNVV LT L+AP + VK       
Sbjct: 4    QESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVK------- 56

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
               +N   TE +    ++ YS +I+ F  L S  D E+L+  +  ++    D + PIVL+
Sbjct: 57   ---ENGAKTEDA---ASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLS 110

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXXX 2143
            PD DK HR  VHNFFK NL FLVTD +DGP+  +KC+R+R         G+N++      
Sbjct: 111  PDYDKVHRTAVHNFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKK----- 165

Query: 2142 XXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 1969
                                        + GD+ FDSRG DDW E  GKFLRFHL+KENK
Sbjct: 166  --------------------------RKERGDKPFDSRGVDDWSEHVGKFLRFHLFKENK 199

Query: 1968 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 1789
            DTQEAL VIGKMLG++P+AFG AGTKDKRAVT QRVTVFKQ ASRLA+LN RL GIK+GD
Sbjct: 200  DTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASRLAALNDRLIGIKVGD 259

Query: 1788 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1609
            FCYV  GL LGQL GNRFTITLRGV A++E II+ +A+ LGK GFVNYFGLQRFGSGS+ 
Sbjct: 260  FCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIP 319

Query: 1608 THAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKA 1429
            TH IGA+LLRGEWK+ + ++L+PREGER+ + EAR+YY+ SNDIDGTLR++PR+L+AE+A
Sbjct: 320  THLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRKLPRYLVAERA 379

Query: 1428 ILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYC 1249
            +L  LKK P N+ QAL  +PR LR+MYVHSYQSYLWNHA++ R+QKYG   + VGDLVYC
Sbjct: 380  VLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVVGDLVYC 439

Query: 1248 KRPEVTSAQGGGQNIETSEENAENDLETLYESTDSEVFLDNNTE----------VKVVNS 1099
            K  E     G    I +SE   EN  +   + T     LD+ +E          VK V +
Sbjct: 440  KGHETEKVTG----IVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSLVKAVTA 495

Query: 1098 DDIESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNIS 919
            +DI +G Y I+D+VLPLPGS++++PENDIA VFHD+AKKD +SL ES H+VKEFSI N++
Sbjct: 496  EDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVHNVKEFSITNVT 555

Query: 918  GGYRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGIT---MLHD 748
            G YRR+ QKP+DF W I+KY D    L ETD + + K+ K  N   E P+G++    LHD
Sbjct: 556  GSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKT-KPVNVNKEYPTGVSGDGSLHD 614

Query: 747  K-DADACS-----LAATDKKCSDKDNSEPSTDTV-----CSSHIALQLAFTLPTSCYATM 601
            +     CS     L   D +   +    P  +++       + IAL+L+FTLP SCYATM
Sbjct: 615  RIKQSECSVNDVQLPKKDNEVESEGEKLPHVESLGGPIPQGTQIALKLSFTLPASCYATM 674

Query: 600  AIRELLKTSTSTQYHKSLD 544
            AIRELLKTSTS  +HK+L+
Sbjct: 675  AIRELLKTSTSVAFHKTLN 693


>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
          Length = 784

 Score =  713 bits (1841), Expect = 0.0
 Identities = 372/720 (51%), Positives = 493/720 (68%), Gaps = 20/720 (2%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            +E+DVGI CY +++PGFRGILKQRY+DFIVNEVD +GNVV LT LDAP            
Sbjct: 64   DESDVGIFCYISNLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPP----------- 112

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
             E   E  TE  D  G + Y+ +I++F  L  ++DAE L+ L+ +I+    +++ PIVL+
Sbjct: 113  -ETREETRTETIDA-GTKSYTSEIESFRCLAGDSDAESLEALINQINSGGGEEVSPIVLS 170

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRY-------FGKNTEXXXXXX 2143
            P SDK+HR E+HNFFK N  FLVTDT+DGP+  +KC+R+R         G+N++      
Sbjct: 171  PSSDKSHRTEIHNFFKKNFKFLVTDTVDGPDASSKCIRVRLNSGRHNNHGRNSKK----- 225

Query: 2142 XXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 1969
                                        + GD+ FD RG+DDW E  GKFLRFHLYKENK
Sbjct: 226  --------------------------RKERGDKPFDRRGSDDWPEHVGKFLRFHLYKENK 259

Query: 1968 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 1789
            D+QEAL +IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQRASRLA+LN RL GI++GD
Sbjct: 260  DSQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNDRLIGIQVGD 319

Query: 1788 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1609
            FCYV   LVLGQLSGNRFT+TLRGV A++E  IK +A  LG+ GF+NYFGLQRFGSGSV 
Sbjct: 320  FCYVKEELVLGQLSGNRFTVTLRGVVADSEETIKASASALGRRGFINYFGLQRFGSGSVP 379

Query: 1608 THAIGAALLRGEWKTAIDLILDPREGE--REDVREAREYYRSSNDIDGTLRRMPRHLIAE 1435
            T+ IGA L RGEWK A+ +ILDPREG+   + + +AREYY+ +NDIDGTLR++PRHL+AE
Sbjct: 380  TYLIGAMLFRGEWKDAVHMILDPREGDILLDVITKAREYYKETNDIDGTLRQLPRHLVAE 439

Query: 1434 KAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLV 1255
             AIL  LKK P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R+QKYG   + VGDLV
Sbjct: 440  NAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTDQVVVGDLV 499

Query: 1254 YCKRPEVTSAQG-GGQNIETSEENAENDLETLYESTDSEVFLDNNTEVKVVNSDDIESGK 1078
            +CK   +   +G    + +  + NA      + E + +E+  + N  VKVV ++DI +G 
Sbjct: 500  FCKEHNIEKVKGTASADCKDEDSNAIFGSHDIDEVSGAELPEERNNPVKVVAAEDILAGN 559

Query: 1077 YAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLV 898
            +AI+DVVLPLPGS+++ P NDIAQV+HD+AKKD++SL ES+H+VKEFSI +++G YRR+ 
Sbjct: 560  FAIDDVVLPLPGSRVILPTNDIAQVYHDLAKKDAISLTESAHNVKEFSITSMTGSYRRVF 619

Query: 897  QKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSG---ITMLHDKDADACS 727
            QKP+D+ W+++ Y +    LAETD D++ KS     A     +G    T    +  +   
Sbjct: 620  QKPVDYEWELLTYTNGTIPLAETDLDIIAKSKPAHVAEENEVNGNEESTKRSKRVENEAV 679

Query: 726  LAATDKKCSDKDNSEPSTDTVCSSH-----IALQLAFTLPTSCYATMAIRELLKTSTSTQ 562
            L   D K   +  +E   ++ C ++     +AL+L+FTLP SCYATMAIRELLKTSTS +
Sbjct: 680  LQTDDNKVDGEREAELQAESTCGTNSQEPQMALKLSFTLPASCYATMAIRELLKTSTSVR 739


>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 701

 Score =  712 bits (1839), Expect = 0.0
 Identities = 386/731 (52%), Positives = 490/731 (67%), Gaps = 33/731 (4%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            +E++VGI CY + +PGFRGILKQRY+DF+VNEVD EGNVV LT L+AP + VK       
Sbjct: 4    QESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVK------- 56

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
               +N   TE +    ++ YS +I+ F  L S  D E+L+  +  ++    D + PIVL+
Sbjct: 57   ---ENGAKTEDA---ASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLS 110

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXXX 2143
            PD DK HR  VHNFFK NL FLVTD +DGP+  +KC+R+R         G+N++      
Sbjct: 111  PDYDKVHRTAVHNFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKK----- 165

Query: 2142 XXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 1969
                                        + GD+ FDSRG DDW E  GKFLRFHL+KENK
Sbjct: 166  --------------------------RKERGDKPFDSRGVDDWSEHVGKFLRFHLFKENK 199

Query: 1968 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 1789
            DTQEAL VIGKMLG++P+AFG AGTKDKRAVT QRVTVFKQ ASRLA+LN RL GIK+GD
Sbjct: 200  DTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASRLAALNDRLIGIKVGD 259

Query: 1788 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1609
            FCYV  GL LGQL GNRFTITLRGV A++E II+ +A+ LGK GFVNYFGLQRFGSGS+ 
Sbjct: 260  FCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIP 319

Query: 1608 THAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKA 1429
            TH IGA+LLRGEWK+ + ++L+PREGER+ + EAR+YY+ SNDIDGTLR++PR+L+AE+A
Sbjct: 320  THLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRKLPRYLVAERA 379

Query: 1428 ILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYC 1249
            +L  LKK P N+ QAL  +PR LR+MYVHSYQSYLWNHA++ R+QKYG   + VGDLVYC
Sbjct: 380  VLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVVGDLVYC 439

Query: 1248 KRPEVTSAQGGGQNIETSEENAENDLETLYESTDSEVFLDNNTE----------VKVVNS 1099
            K  E     G    I +SE   EN  +   + T     LD+ +E          VK V +
Sbjct: 440  KGHETEKVTG----IVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSLVKAVTA 495

Query: 1098 DDIESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNIS 919
            +DI +G Y I+D+VLPLPGS++++PENDIA VFHD+AKKD +SL ES H+VKEFSI N++
Sbjct: 496  EDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVHNVKEFSITNVT 555

Query: 918  GGYRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGIT---MLHD 748
            G YRR+ QKP+DF W I+KY D    L ETD + + K+ K  N   E P+G++    LHD
Sbjct: 556  GSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKT-KPVNVNKEYPTGVSGDGSLHD 614

Query: 747  K-DADACS-----LAATDKKCSDKDNSEPSTDTV-----CSSHIALQLAFTLPTSCYATM 601
            +     CS     L   D +   +    P  +++       + IAL+L+FTLP SCYATM
Sbjct: 615  RIKQSECSVNDVQLPKKDNEVESEGEKLPHVESLGGPIPQGTQIALKLSFTLPASCYATM 674

Query: 600  AIRELLKTSTS 568
            AIRELLKTSTS
Sbjct: 675  AIRELLKTSTS 685


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  711 bits (1834), Expect = 0.0
 Identities = 372/735 (50%), Positives = 505/735 (68%), Gaps = 29/735 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            EE+DVGILCY + +PGFRGILKQRY DFIVNEVD +GNVV LTCL+ P + V+ ++    
Sbjct: 56   EESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKECGA 115

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRIS--VKDFDDIEPIV 2308
            K +D + S  +S       Y  +I+ F  L  ++DAEKL+ L+ ++       D +  IV
Sbjct: 116  KVSDEKMSESKS-------YEAEIELFRSLAGDSDAEKLESLISQVDSCTGSEDSVPHIV 168

Query: 2307 LAPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXX 2149
            L+PDSDK HR  VHNFFK N  FLVTDT DGP+  +KC+R+R         G+N++    
Sbjct: 169  LSPDSDKTHRTAVHNFFKQNFKFLVTDTTDGPDASSKCIRVRLDSGGHKNNGRNSKK--- 225

Query: 2148 XXXXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKE 1975
                                          + G++ FDSRG+ +W E  GKFLRFHLYKE
Sbjct: 226  ----------------------------RKERGEKPFDSRGSSNWPEHLGKFLRFHLYKE 257

Query: 1974 NKDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKL 1795
            NKDTQEAL +IGKMLG++ K+FG AGTKDKRAV+TQRVTVFKQ+ASRLA+LN RL GIK+
Sbjct: 258  NKDTQEALGIIGKMLGIQSKSFGFAGTKDKRAVSTQRVTVFKQQASRLAALNDRLIGIKV 317

Query: 1794 GDFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGS 1615
            GDFC+V  GL+LG+L GNRFT+TLRGV A++E  IK AAD LG++GF+NYFGLQRFG+GS
Sbjct: 318  GDFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHGFINYFGLQRFGTGS 377

Query: 1614 VGTHAIGAALLRGEWKTAIDLILDPREGE-----REDVREAREYYRSSNDIDGTLRRMPR 1450
            V TH IGAALLRGEWKTA+ +ILDPREG+        +R+AREYY+ SNDI+GTLR++PR
Sbjct: 378  VPTHLIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYKESNDIEGTLRQLPR 437

Query: 1449 HLIAEKAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIA 1270
            HL+AE+A+L  LKK P +++QA+  IPR LR+MYVH YQSYLWNHA++ R+QKYG   + 
Sbjct: 438  HLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHAASERVQKYGFDQVL 497

Query: 1269 VGDLVYCKRPEVTSAQGGGQNIETSEENAEN--DLETLYESTDSEVFLDNNTEVKVVNSD 1096
            +GDLVYCK  + +  +  G N E +++N ++  D   L E++ +++    NT VKVV  +
Sbjct: 498  LGDLVYCKGDD-SEKETVGVNSECNDDNCDDTYDCSHLDETSGTDLLERKNTLVKVVTVE 556

Query: 1095 DIESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISG 916
            D+ +G Y ++DVVLP+PGS++++P N+IA+V+HD+AKKD+++L ES H VKEFSI +++G
Sbjct: 557  DMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESVHRVKEFSITSMTG 616

Query: 915  GYRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETP---------SGI 763
             YRR+ QKP+DF W+++ Y D  + LAETD D + K+   +    E           S  
Sbjct: 617  SYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEEQGKGDEDNDLSDC 676

Query: 762  TMLHDKDADACSLAATDKKCSDK--DNSEPSTDTVCSSHIALQLAFTLPTSCYATMAIRE 589
            T L     ++ +L++   + S++  ++ + S      + +AL+L+ TLP SCYATMAIRE
Sbjct: 677  TKLPVCSRNSIALSSDTNEESEREVESEQVSGSNWQETQMALKLSLTLPASCYATMAIRE 736

Query: 588  LLKTSTSTQYHKSLD 544
            LLKTSTS  YHK+L+
Sbjct: 737  LLKTSTSVAYHKTLN 751


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  707 bits (1824), Expect = 0.0
 Identities = 370/733 (50%), Positives = 500/733 (68%), Gaps = 27/733 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            +E+D GILC+ +++PGFRGILKQRY DFIVNEVD +  VV LT LD P +E         
Sbjct: 49   DESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEA-------- 100

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRI-SVKDFDDIEPIVL 2305
              A     T+ SD L N  Y+ +I++F  L  ++DA+ L+ L+ ++ S K+ D I PIVL
Sbjct: 101  --AVEHNETKASDQL-NRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVL 157

Query: 2304 APDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRY--------FGKNTEXXXX 2149
            + +SDK+HR  +HNFFK N  FLVTDT+DGP+  +KC+R+R          G+N++    
Sbjct: 158  SANSDKSHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKK--- 214

Query: 2148 XXXXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKE 1975
                                          + GD  FDSRG+++W E  GKFLRFHLYKE
Sbjct: 215  ----------------------------RKERGDNPFDSRGSENWPEQLGKFLRFHLYKE 246

Query: 1974 NKDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKL 1795
            NKDTQEAL +I KMLG+ P++FG AGTKDKR+V+TQRVTVFKQRAS+LA+LN RL GI+L
Sbjct: 247  NKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRL 306

Query: 1794 GDFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGS 1615
            GDFCYV  GL+LGQL GNRFTITLRGV  ++E +IK +A+ LG+NGF+NYFGLQRFGSGS
Sbjct: 307  GDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGS 366

Query: 1614 VGTHAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAE 1435
            V TH +GA LLRGEWK+A+ +ILDPREGER ++ +AREYY+ ++DIDGTLR++PRHL+AE
Sbjct: 367  VPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAE 426

Query: 1434 KAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLV 1255
            +AIL  LKK P N++QAL  IPR LR+MYVHSYQS+LWNHA++AR+QK+G + + VGDLV
Sbjct: 427  RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLV 486

Query: 1254 YCKRPEVTSAQG-GGQNIETSEENAENDLETLYESTDSEVFLDNNTEVKVVNSDDIESGK 1078
            +CK  +     G      E    N  +D   L E  +++     +  VK V ++DI SGK
Sbjct: 487  FCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGK 546

Query: 1077 YAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLV 898
            Y I+DVVLPLPGS+++YP ND+A+V+H +A+KD ++L ES H+VKEFSI +++G YRR+ 
Sbjct: 547  YTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVF 606

Query: 897  QKPIDFTWKIMKYEDPGQTLAETDHDLLQKS-----LKKDNA----PLETPSGITMLHDK 745
            QKP+DF W+++ Y D  + LAETD D + K      +K++ A      + PS      + 
Sbjct: 607  QKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDPSDCMKQSES 666

Query: 744  DADACSLAATDKKCS-DKDNSEPSTDTVCSS-----HIALQLAFTLPTSCYATMAIRELL 583
             +    L+  + + +  K+  +P  ++VC +      +AL+L  TLP+SCYATMAIRELL
Sbjct: 667  LSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELL 726

Query: 582  KTSTSTQYHKSLD 544
            KTSTS  +HK+L+
Sbjct: 727  KTSTSVAFHKTLN 739


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  706 bits (1822), Expect = 0.0
 Identities = 386/735 (52%), Positives = 492/735 (66%), Gaps = 29/735 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            EE+DVGI  Y + +PGFRGILKQRY DFIVNEVD +GNVV LT LDAP + +        
Sbjct: 5    EESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESM-------- 56

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
             E +  K ++QS    N+ Y+ +I+ F  LV ++D E LK L+ +++    D + PIVL+
Sbjct: 57   -EKNETKISDQS----NKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLS 111

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXX 2122
              SDK+HR  VHNFFK NL FLVTDTIDGP+T +KC+R+R     +              
Sbjct: 112  SSSDKSHRTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRR 171

Query: 2121 XXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALN 1948
                                    D+ FDSRG+D+W E  GKFLRFHLYKENKDTQEA+ 
Sbjct: 172  ------------------------DKPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIG 207

Query: 1947 VIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAG 1768
            +IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ A+RLA+LN RL GIK+GDFC+V  G
Sbjct: 208  LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALNERLIGIKVGDFCHVREG 267

Query: 1767 LVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAA 1588
            LVLGQL GNRFTITLRGV A++E  IK +AD LG+ GF+NYFGLQRFGSGSV TH IGAA
Sbjct: 268  LVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAA 327

Query: 1587 LLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKK 1408
            LLRGEW+TA+ LILDPREGER+ +R+AREYY+ S+DI+GTLR+ PRHL+AE+AIL  LKK
Sbjct: 328  LLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQFPRHLVAERAILQCLKK 387

Query: 1407 DPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVTS 1228
             P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R+Q YG K + +GDLVYCK      
Sbjct: 388  YPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCK------ 441

Query: 1227 AQGGGQNIE--TSEENAENDLETLYESTDSEVF---------LDNNTEVKVVNSDDIESG 1081
                G N E  T   N+E D +   ++ DS  F          + N  VK ++++D+ +G
Sbjct: 442  ----GDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTG 497

Query: 1080 KYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRL 901
             Y I+DVVLPLPGS+ +YP NDIAQV+HD AKKD++SL ES+H VKEFSI N++GG+RR+
Sbjct: 498  NYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRV 557

Query: 900  VQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDN--APLETPSGITMLHDKDADACS 727
             QKPIDF W+++ Y +    LAETD D + KS K  N     ++ +G    +       S
Sbjct: 558  FQKPIDFEWELLTYTEGNIPLAETDWDKITKS-KPSNIIGGEDSRNGNEKENSFQCMKQS 616

Query: 726  LAATDKKCSDKDNSEPSTDT--------------VCSSHIALQLAFTLPTSCYATMAIRE 589
             +         DN+EP+  T                 +  AL+L+FTLP SCYATMAIRE
Sbjct: 617  ESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRE 676

Query: 588  LLKTSTSTQYHKSLD 544
            LLKTSTS  + K+L+
Sbjct: 677  LLKTSTSVAFQKTLN 691


>gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  705 bits (1819), Expect = 0.0
 Identities = 372/722 (51%), Positives = 481/722 (66%), Gaps = 17/722 (2%)
 Frame = -3

Query: 2658 EADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVVK 2479
            E+DVGILC+ + +PGFRGILKQRY+DFIVNEVD EGNVV LT LDAP             
Sbjct: 48   ESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPP------------ 95

Query: 2478 EADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLAP 2299
            EA  E  T+  D L N+ Y+ +I  F  L  + DA++L+  + +I+    +DI PIVL+P
Sbjct: 96   EAVQEGETKTPDQL-NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVLSP 154

Query: 2298 DSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXXX 2119
            DSDK+HR  +HNFFK NL FLVTDT+DGP++ +KC+R+R    N                
Sbjct: 155  DSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNKGRNSKK------- 207

Query: 2118 XXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALNV 1945
                                + GD+ +DSRG+  W E  GKFLRFHLYKENKDTQEAL +
Sbjct: 208  ------------------RKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEALGL 249

Query: 1944 IGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAGL 1765
            IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ ASRLA+LN RL GIK+GDFCYV    
Sbjct: 250  IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKDDF 309

Query: 1764 VLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAAL 1585
            +LGQL GNRFTI LRG+ A++E  IK + + LG++GF+NYFGLQRFGSGS+ TH IGA L
Sbjct: 310  LLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGATL 369

Query: 1584 LRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKKD 1405
            LRGEW+ A   ILDPREGER+ V +AREYY+ + DI+GTLR++PRHL+AE+A+L  LKK 
Sbjct: 370  LRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKC 429

Query: 1404 PSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVTSA 1225
            P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R++KYG+  + +GDLVYCK  +    
Sbjct: 430  PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEKV 489

Query: 1224 QGGGQNIETSEENAENDLETLYESTDSEVFLDNNTEVKVVNSDDIESGKYAIEDVVLPLP 1045
            +      E +      D   L E + +++    N  VK + + DI +G Y IEDVVLP+P
Sbjct: 490  KVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYTIEDVVLPMP 549

Query: 1044 GSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWKIM 865
            GS+I+YP NDIA V+HDMAKKD +SL ES H++KEFSI +++G YRR+ QKPIDF W+++
Sbjct: 550  GSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELL 609

Query: 864  KYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKD--ADACSLAATDKKCS--- 700
             Y D    L+ETD D + K+   +    E P+  T   D     +       DKK S   
Sbjct: 610  SYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQDSSDHMEHIESFEDDKKFSTGN 669

Query: 699  -----DKDNSEPSTDTVCSSHI-----ALQLAFTLPTSCYATMAIRELLKTSTSTQYHKS 550
                  ++   P   ++  S+      AL+LAFTLP SCYATMAIRELLKTSTS  +HK+
Sbjct: 670  VEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKT 729

Query: 549  LD 544
            L+
Sbjct: 730  LN 731


>gb|ESW19147.1| hypothetical protein PHAVU_006G100200g [Phaseolus vulgaris]
          Length = 691

 Score =  703 bits (1815), Expect = 0.0
 Identities = 371/733 (50%), Positives = 499/733 (68%), Gaps = 27/733 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            EE +VGI C+ +D+PGFRGILKQRY+DFIVNEVD +G VV+L+ LDAP++E+++ Q    
Sbjct: 7    EEDEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGAVVQLSSLDAPEEELESVQ---- 62

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
                 E  T  SD + +  Y+ +I+AF+ L  E DA  L+  + +I+      + PIVL+
Sbjct: 63   -----ENGTNTSDTVVS--YASRIEAFKILAGEPDAILLEEFVNKINAGGEVSVSPIVLS 115

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXXX 2143
            PDSDK+HR  VHNFFK N  FLVTD +DGP+   KC+R+R         GKN++      
Sbjct: 116  PDSDKSHRKAVHNFFKENFKFLVTDVVDGPDASLKCIRVRLNSAEPNNKGKNSKK----- 170

Query: 2142 XXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 1969
                                        + GD+ FDSRG+++W E  GKFLRFH+YKENK
Sbjct: 171  --------------------------RKERGDKPFDSRGSENWPENVGKFLRFHIYKENK 204

Query: 1968 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 1789
            DT EAL VIG MLG++PK+FG AGTKDKRAVTTQRVTV+KQRASRLASLN RL+GIKLGD
Sbjct: 205  DTHEALGVIGNMLGIQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLNKRLFGIKLGD 264

Query: 1788 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1609
            FCYV  GL LGQL GNRFTITLRG+ +++E IIK +AD LG+ GF+NYFGLQRFGSGS+ 
Sbjct: 265  FCYVKEGLCLGQLMGNRFTITLRGIVSDSEDIIKASADALGRLGFINYFGLQRFGSGSLP 324

Query: 1608 THAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKA 1429
            TH IGAALLRGEWK A+D+ILDPREGER  + +AR+YY+ +ND+ GTL+++PR+L+AE+A
Sbjct: 325  THLIGAALLRGEWKLAVDMILDPREGERSAIAKARKYYKENNDVVGTLKQLPRYLVAERA 384

Query: 1428 ILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYC 1249
            +L  LK  P N++QAL  IPR LRL+Y+HSYQSYLWNHA++ R+QKYG + + +GDLV C
Sbjct: 385  VLQSLKTSPGNYLQALKSIPRTLRLLYIHSYQSYLWNHAASKRVQKYGTEQVVLGDLVNC 444

Query: 1248 KR---PEVTSAQGGGQNIETS---EENAENDLETLYESTDSEVFLDNNTEVKVVNSDDIE 1087
            K     ++T   G     + S   + + +N++         ++  D N+ VKVV+++D+ 
Sbjct: 445  KENSTAKITEFVGSEYPEDCSGGYDSSNQNEISV-------DIHEDINSCVKVVDAEDLN 497

Query: 1086 SGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYR 907
            SG Y I+DV+LP+PGS++ YP N IA V+ D+AKKD +SL ES H+V+EFSI +I+G YR
Sbjct: 498  SGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEEFSITSITGCYR 557

Query: 906  RLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNA-PLETPSGIT------MLHD 748
            R+ QKPI+F W+++ Y D  + L ETD + + KS   +   P++  +G T      +   
Sbjct: 558  RVFQKPINFEWELLTYSDSNKQLVETDLEKINKSAPTNTVKPIDVGNGKTEEAFDCIREF 617

Query: 747  KDADACSLAATDKKCSDKDNSEPSTDTVC-----SSHIALQLAFTLPTSCYATMAIRELL 583
            + +D        K  + ++   P  +++C      SH AL+L+FTLP SCYATMAIRELL
Sbjct: 618  ESSDDFPKVENFKDIAGEEVKLPHGESLCDSSSQDSHTALKLSFTLPASCYATMAIRELL 677

Query: 582  KTSTSTQYHKSLD 544
            KTSTS  YHK+L+
Sbjct: 678  KTSTSVAYHKTLN 690


>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            tuberosum]
          Length = 685

 Score =  702 bits (1813), Expect = 0.0
 Identities = 378/721 (52%), Positives = 486/721 (67%), Gaps = 14/721 (1%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            +E+DVGI CY +++PGFRGILKQRY+DFIVNEVD + NVV LT L+AP            
Sbjct: 5    DESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAP------------ 52

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRI-SVKDFDDIEPIVL 2305
            KE    K    SD L N  Y  +I++F  L   +DA+KLK  +  + S  D  D E IVL
Sbjct: 53   KECSENKDVNISDQL-NRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSD-ESIVL 110

Query: 2304 APDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXX 2125
            +P SDK+HR  +HNFFK  L FLVTDTIDG E Q+KCVR+R                   
Sbjct: 111  SPSSDKSHRTAIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRSSRK---- 166

Query: 2124 XXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEAL 1951
                                     D+ +DSRG+D W    GKFLRFHL+KENKDTQEAL
Sbjct: 167  --------------------RKDRDDKRYDSRGSDSWPGHLGKFLRFHLFKENKDTQEAL 206

Query: 1950 NVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNA 1771
            NVI KMLG++ ++FG AGTKDKRAV+TQRVTVFKQ+AS+LA+LN RL GIK+GDFC+V  
Sbjct: 207  NVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALNKRLIGIKVGDFCHVKE 266

Query: 1770 GLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGA 1591
            GL+LGQL GNRFTITLRGV+AE+E IIK +A  LGK+GF+NYFGLQRFGS SV TH IGA
Sbjct: 267  GLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTHLIGA 326

Query: 1590 ALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLK 1411
            ALLRGEWK A+ LILDPREGE+  +   REYY+ S DIDGTLR++PR+L+AEKAIL  LK
Sbjct: 327  ALLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQLPRYLVAEKAILQCLK 386

Query: 1410 KDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVT 1231
            + P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R+QK+G   + +GDLVY K  E  
Sbjct: 387  RSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSKE-EYK 445

Query: 1230 SAQGGGQNIETSEENAENDLETLYESTDSEVFLDNNTEVKVVNSDDIESGKYAIEDVVLP 1051
              +      E   +N  +D   L E +++++  + N  VKV+N +D++SG YAI+DV+LP
Sbjct: 446  VKESFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVINEEDLKSGTYAIDDVLLP 505

Query: 1050 LPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWK 871
            LPGS+++YP NDI +V+ D+A+KD +SL E++H +KEFSI N++G YRR+ QKP DF W+
Sbjct: 506  LPGSRVIYPSNDIGEVYCDLAQKDDISLTETAHKIKEFSITNMTGAYRRVFQKPKDFEWE 565

Query: 870  IMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADACSLAA---TDKKCS 700
            ++ Y D    LAETD D++  S+ K     E P+  +     D+ A S+     + K C 
Sbjct: 566  LLSYTDGTIPLAETDFDVIANSV-KSKVREEDPTNGSKELPADSSAISVGGDMLSGKVCE 624

Query: 699  DKDNSEPSTDTVCS--------SHIALQLAFTLPTSCYATMAIRELLKTSTSTQYHKSLD 544
            +K N+E    +  S        S +AL+L+FTLP SCYATMA+RELLKTSTS  +HKSL+
Sbjct: 625  EKINNEAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 684

Query: 543  N 541
            +
Sbjct: 685  D 685


>gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
          Length = 691

 Score =  702 bits (1811), Expect = 0.0
 Identities = 384/724 (53%), Positives = 480/724 (66%), Gaps = 26/724 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            EE DVGI CY + +PGFRGILKQRY+DF+VNEVD E NVV LT LDAP + VK       
Sbjct: 5    EEPDVGIFCYISQLPGFRGILKQRYSDFMVNEVDTEENVVHLTNLDAPAETVK------- 57

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
                 E  T+  D    + Y+ +I++F  LV   DAE+L+ ++ +I+    D I PIVL+
Sbjct: 58   -----EIETKTHDATSKD-YTTEIESFRSLVDPDDAERLEAIINQINSGSEDSILPIVLS 111

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF--GKNTEXXXXXXXXXXX 2128
            PD DK+HR  VHNFFK N  FLVTDT+DGP+  +KC+R+R    G+N+            
Sbjct: 112  PDYDKSHRTAVHNFFKENFKFLVTDTVDGPDASSKCIRVRINSGGQNSRGRNSRK----- 166

Query: 2127 XXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEA 1954
                                   + GD+ FDSRG+DDW E  GKFLRFHLYKENKDTQEA
Sbjct: 167  ---------------------RKERGDKPFDSRGSDDWSENVGKFLRFHLYKENKDTQEA 205

Query: 1953 LNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVN 1774
            L +I KMLG++P++FG AGTKDKRAVTTQRVTVFKQ ASRLA+LN RL GIK+GDFCYV 
Sbjct: 206  LGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFKQLASRLAALNDRLIGIKVGDFCYVK 265

Query: 1773 AGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIG 1594
             GLVLGQL GNRFTITLRGV A++E  IK +   LGK GF+NYFGLQRFGSGSV TH IG
Sbjct: 266  EGLVLGQLLGNRFTITLRGVVADSEDTIKASVIALGKQGFINYFGLQRFGSGSVPTHLIG 325

Query: 1593 AALLRGEWKTAIDLILDPREGE--REDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILT 1420
            A LLRGEWK+ + L LDPREG+     +  AREYY+ +NDI+GTLR++PRHL++EKAIL 
Sbjct: 326  ATLLRGEWKSTVSLFLDPREGDILLMLLGIAREYYKETNDIEGTLRQLPRHLVSEKAILQ 385

Query: 1419 GLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRP 1240
             LKK P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R+QKYG   + +GDLVYCK  
Sbjct: 386  CLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLVYCKGN 445

Query: 1239 EVTSAQGGGQNIETSEENAENDLETLYESTDSEVFLDNNTE-----VKVVNSDDIESGKY 1075
            E          + +S+   EN  +TL      ++   N  E     VK V ++DI SG Y
Sbjct: 446  ETEKV----SEVVSSKCVDENGNDTLDPIDLDDISGTNLPEERLNLVKAVTAEDILSGNY 501

Query: 1074 AIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQ 895
             I+DVVLP+PGS++++PENDIA VFHD+AKKD++SL ES H+VKEFSI +++G YRR+ Q
Sbjct: 502  TIDDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTESVHNVKEFSITSMTGSYRRVFQ 561

Query: 894  KPIDFTWKIMKYEDPGQTLAETDHDLLQK----SLKKDNAPLETPSGITMLHDKDADA-- 733
            KP+DF W+I+KY D  + L +TD D + K    SL +D            LHDK   +  
Sbjct: 562  KPMDFEWEILKYIDGNKPLVDTDFDKIAKTKPSSLNEDG----------RLHDKTKQSEC 611

Query: 732  ----CSLAATDKKCSDKDNSEPSTDTVCSSH-----IALQLAFTLPTSCYATMAIRELLK 580
                  L   D     K    P  +++C ++      AL+L+FTLP SCYATMAIRELLK
Sbjct: 612  LDNDIGLQTDDNGAKAKGEELPQAESLCDTNPQETQTALKLSFTLPASCYATMAIRELLK 671

Query: 579  TSTS 568
            TSTS
Sbjct: 672  TSTS 675


>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            lycopersicum]
          Length = 685

 Score =  701 bits (1809), Expect = 0.0
 Identities = 376/721 (52%), Positives = 484/721 (67%), Gaps = 14/721 (1%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            +E+DVGI CY +++PGFRGILKQRY+DFIVNEVD + NVV L  L+AP            
Sbjct: 5    DESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLNSLEAP------------ 52

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRI-SVKDFDDIEPIVL 2305
            KE    K    SD L N  Y  +I++F  L   +DA+KLK  +  + S  D  D E IVL
Sbjct: 53   KECSENKDVNISDQL-NRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSD-ESIVL 110

Query: 2304 APDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXX 2125
            +P SDK+HR E+HNFFK  L FLVTDTIDG E Q+KCVR+R                   
Sbjct: 111  SPSSDKSHRTEIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRYSRK---- 166

Query: 2124 XXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEAL 1951
                                     D+ +DSRG+D W    GKFLRFHL+KENKDTQEAL
Sbjct: 167  --------------------RKDRNDKRYDSRGSDSWPGHLGKFLRFHLFKENKDTQEAL 206

Query: 1950 NVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNA 1771
            NVI KMLG++ ++FG AGTKDKRAV+TQRVTVFKQ+AS+LA+LN RL GIK+GDFC+V  
Sbjct: 207  NVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALNKRLIGIKVGDFCHVKE 266

Query: 1770 GLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGA 1591
            GL+LGQL GNRFTITLRGV+AE+E IIK +A  LGK+GF+NYFGLQRFGS SV TH IGA
Sbjct: 267  GLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTHLIGA 326

Query: 1590 ALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLK 1411
            ALLRGEWK A+ LILDPREGE+  +   REYY+ S DIDGTLR++PR+L+AEKAIL  LK
Sbjct: 327  ALLRGEWKAAVSLILDPREGEKNTISTVREYYKESGDIDGTLRQLPRYLVAEKAILQSLK 386

Query: 1410 KDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVT 1231
            + P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R+QK+G   + +GDLVY K  +  
Sbjct: 387  RSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSKE-DYK 445

Query: 1230 SAQGGGQNIETSEENAENDLETLYESTDSEVFLDNNTEVKVVNSDDIESGKYAIEDVVLP 1051
              +      E   +N  +D   L E +++++  + N  VKV+N +D++SG Y I+DV+LP
Sbjct: 446  VKESFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVINEEDLKSGTYTIDDVLLP 505

Query: 1050 LPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWK 871
            L GS+++YP NDI +V+ D+A+KD +SL E++H +KEFSI N++G YRR+ QKP DF W+
Sbjct: 506  LSGSRVIYPSNDIGEVYRDLAQKDGISLTETAHKIKEFSITNMTGAYRRVFQKPKDFEWE 565

Query: 870  IMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADACSLAA---TDKKCS 700
            ++ Y D    LAETD D++ KS+ K     E PS  +     D+ A S+     + K C 
Sbjct: 566  LLSYTDGTIPLAETDFDVIAKSV-KSKVIEEVPSNGSKELPADSSAISVGGDMLSGKVCE 624

Query: 699  DKDNSEPSTDTVCS--------SHIALQLAFTLPTSCYATMAIRELLKTSTSTQYHKSLD 544
            +  N+E    +  S        S +AL+L+FTLP SCYATMA+RELLKTSTS  +HKSL+
Sbjct: 625  ETINNEAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 684

Query: 543  N 541
            +
Sbjct: 685  D 685


>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 690

 Score =  701 bits (1808), Expect = 0.0
 Identities = 374/740 (50%), Positives = 504/740 (68%), Gaps = 33/740 (4%)
 Frame = -3

Query: 2664 AEEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAV 2485
            AEE +VGI C+ +D+PGFRGILKQRY+DFIVNEVD +G VV+L+ LDAP +E ++SQ   
Sbjct: 6    AEEHEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGTVVQLSSLDAPQEEPESSQ--- 62

Query: 2484 VKEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVL 2305
                  E  T  SD + +  Y+ QI++F+ L  ++DA  L+  + +I+    D + PIVL
Sbjct: 63   ------ENGTNTSDNVVS--YASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVL 114

Query: 2304 APDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXX 2146
            +PDSDK+HR  +HNFFK N  FLVTD +DGP+  +KC+R+R         GKN++     
Sbjct: 115  SPDSDKSHRKAMHNFFKENFKFLVTDVVDGPDASSKCIRVRLNSAEPNNKGKNSKK---- 170

Query: 2145 XXXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKEN 1972
                                         + GD+ FDSRG+++W +  GKFLRFHLYKEN
Sbjct: 171  ---------------------------RKERGDKPFDSRGSENWPKNVGKFLRFHLYKEN 203

Query: 1971 KDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLG 1792
            KDT EAL VIG ML ++PK+FG AGTKDKRAVTTQRVTV+KQRASRLASLN RL+GIKLG
Sbjct: 204  KDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLNKRLFGIKLG 263

Query: 1791 DFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSV 1612
            DFCYV  GL LGQL GNRFTITLRG+ A++E IIK +AD LG++GF+NYFGLQRFGSGS+
Sbjct: 264  DFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSL 323

Query: 1611 GTHAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEK 1432
             TH IGAALL+GEWK A+D+ILDPR+GE+  + +AR+YY+ S+D+ GTL+++PR+L+AE+
Sbjct: 324  PTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAER 383

Query: 1431 AILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVY 1252
            A+L  LK  P N++QAL  IPR LR++YVHSYQSYLWNHA++ R+QKYG +++ +GDLVY
Sbjct: 384  AVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVY 443

Query: 1251 CKR---PEVTSAQGGGQNIETS---EENAENDLE-TLYESTDSEVFLDNNTEVKVVNSDD 1093
            CK     +VT + G     + S   + N E+++   ++E  DS         VKVV+ +D
Sbjct: 444  CKENSTGKVTESVGSEYAEDCSGRYDSNNEDEISGEIHEEIDS---------VKVVDVED 494

Query: 1092 IESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGG 913
            + SG Y I+DV+LP+PGS+I YP N IA V+ D+AKKD +SL ES H+V++FSI +I+G 
Sbjct: 495  LNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGC 554

Query: 912  YRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADA 733
            YRR+ QKPI+F W+++ Y D  + L ETD D + KS      P+ T   +   + K+ +A
Sbjct: 555  YRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKS-----KPMGTVKQMGAANGKNEEA 609

Query: 732  C----SLAATDKKCSDKDNSEPSTDTVCSSH-------------IALQLAFTLPTSCYAT 604
                  L +++     ++ SE + + +   H             IAL+L+FTLP SCYAT
Sbjct: 610  FDCIRELESSNDVVKVENYSEIAGEEIKLPHDESLSGSSSQDSQIALKLSFTLPASCYAT 669

Query: 603  MAIRELLKTSTSTQYHKSLD 544
            MAIRELLKTSTS  YHK+L+
Sbjct: 670  MAIRELLKTSTSVAYHKTLN 689


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  699 bits (1805), Expect = 0.0
 Identities = 372/729 (51%), Positives = 496/729 (68%), Gaps = 23/729 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            +EADVGI C+ + +PGFRGILKQRY DFIVNEVD +GNVV LT LD P +         V
Sbjct: 41   DEADVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHLTSLDLPPE-------MAV 93

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
            KE D  KS +       + Y+  +++F+ + S  DAE+L++L+ +++     ++ P+VL 
Sbjct: 94   KEEDKAKSCDNVP----QNYTSAVESFKSISSVTDAERLEILINQVTSGTDGEVLPVVLD 149

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRY-FGKNTEXXXXXXXXXXXX 2125
            P SDK+ R  +HNF K N  FLVTDT+DGP++ +KC+R+R   G N              
Sbjct: 150  PSSDKSKRTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGANNNRGNRSKK----- 204

Query: 2124 XXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEAL 1951
                                  + GD+ FDSRG++ W E  GKFLRFHLYKENKDTQEAL
Sbjct: 205  --------------------RKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENKDTQEAL 244

Query: 1950 NVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNA 1771
             +IGKMLG++PK+FG +GTKDKR+V+TQRVTVFKQ+AS+LA+LN RL+GIK+GDFC V  
Sbjct: 245  GLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFCNVKE 304

Query: 1770 GLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGA 1591
            GL+LGQL GNRFTITLRGV A++E  IK++A+ LGK+GF+NYFGLQRFGSGSV TH +GA
Sbjct: 305  GLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVGA 364

Query: 1590 ALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLK 1411
            ALL+GEWK A+D+ILDPRE ER  V +AREYY+ + DIDGTLR++PR+L+AE+AIL  LK
Sbjct: 365  ALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLK 424

Query: 1410 KDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVT 1231
            K P N++QAL  IPR LR+MYVHSYQSYLWN+A++ R++ YG   + +GDLV  K   V 
Sbjct: 425  KCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTK---VD 481

Query: 1230 SAQGGGQNIETSEENAENDLETLYESTDSEVFLDNNTE----VKVVNSDDIESGKYAIED 1063
            +A+    ++ TSE N  ++     +  D    +D   E    VKVV+ +D+E+G Y+  D
Sbjct: 482  AAKRMVDSL-TSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSD 540

Query: 1062 VVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPID 883
            +VLPLPGS+++YP NDIA+++HD+AKKD +SL ES H VKEFSI +++GGYRR+ QKPID
Sbjct: 541  IVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPID 600

Query: 882  FTWKIMKYEDPGQTLAETDHDLL----------------QKSLKKDNAPLETPSGITMLH 751
            F W+++ Y D  + LAETD D +                 +S+K D  P +  SG T L 
Sbjct: 601  FEWELLTYTDSNKPLAETDLDRIPMNKPVEKVGSTEEIEDESMKSDTNPHD--SGETNLK 658

Query: 750  DKDADACSLAATDKKCSDKDNSEPSTDTVCSSHIALQLAFTLPTSCYATMAIRELLKTST 571
            D+         TD   ++KD   P ++    + +AL++A TLP+SCYATMAIRELLKTST
Sbjct: 659  DQ---------TDSNEAEKDTGNPDSE---QTQMALKMALTLPSSCYATMAIRELLKTST 706

Query: 570  STQYHKSLD 544
            S  YHK+L+
Sbjct: 707  SVAYHKTLN 715


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  692 bits (1787), Expect = 0.0
 Identities = 383/735 (52%), Positives = 489/735 (66%), Gaps = 29/735 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            EE+DVGI  Y + +PGFRGILKQRY DFIVNEVD +GNVV LT LDAP + +        
Sbjct: 5    EESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESM-------- 56

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
             E +  K ++QS    N+ Y+ +I+ F  LV ++D E LK L+ +++    D + PIVL+
Sbjct: 57   -EKNETKISDQS----NKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLS 111

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXX 2122
              SDK+HR  VHNFFK NL FLVTDTIDGP+T +KC+R+R     +              
Sbjct: 112  SSSDKSHRTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRR 171

Query: 2121 XXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALN 1948
                                    D+ FDSRG+D+W E  GKFLRFHLYKENKDTQEA+ 
Sbjct: 172  ------------------------DKPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIG 207

Query: 1947 VIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAG 1768
            +IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ A+RLA+LN RL GIK+GDFC+V  G
Sbjct: 208  LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALNERLIGIKVGDFCHVREG 267

Query: 1767 LVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAA 1588
            LVLGQL GNRFTITLRGV A++E  IK +AD LG+ GF+NYFGLQRFGSGSV TH IGAA
Sbjct: 268  LVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAA 327

Query: 1587 LLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKK 1408
            LLRGEW+TA+ LILDPREG+   + +AREYY+ S+DI+GTLR+ PRHL+AE+AIL  LKK
Sbjct: 328  LLRGEWETAVSLILDPREGDIL-LLKAREYYKESDDIEGTLRQFPRHLVAERAILQCLKK 386

Query: 1407 DPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVTS 1228
             P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R+Q YG K + +GDLVYCK      
Sbjct: 387  YPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCK------ 440

Query: 1227 AQGGGQNIE--TSEENAENDLETLYESTDSEVF---------LDNNTEVKVVNSDDIESG 1081
                G N E  T   N+E D +   ++ DS  F          + N  VK ++++D+ +G
Sbjct: 441  ----GDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTG 496

Query: 1080 KYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRL 901
             Y I+DVVLPLPGS+ +YP NDIAQV+HD AKKD++SL ES+H VKEFSI N++GG+RR+
Sbjct: 497  NYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRV 556

Query: 900  VQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDN--APLETPSGITMLHDKDADACS 727
             QKPIDF W+++ Y +    LAETD D + KS K  N     ++ +G    +       S
Sbjct: 557  FQKPIDFEWELLTYTEGNIPLAETDWDKITKS-KPSNIIGGEDSRNGNEKENSFQCMKQS 615

Query: 726  LAATDKKCSDKDNSEPSTDT--------------VCSSHIALQLAFTLPTSCYATMAIRE 589
             +         DN+EP+  T                 +  AL+L+FTLP SCYATMAIRE
Sbjct: 616  ESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRE 675

Query: 588  LLKTSTSTQYHKSLD 544
            LLKTSTS  + K+L+
Sbjct: 676  LLKTSTSVAFQKTLN 690


>gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao]
          Length = 763

 Score =  689 bits (1779), Expect = 0.0
 Identities = 371/742 (50%), Positives = 484/742 (65%), Gaps = 37/742 (4%)
 Frame = -3

Query: 2658 EADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVVK 2479
            E+DVGILC+ + +PGFRGILKQRY+DFIVNEVD EGNVV LT LDAP  EV     ++ K
Sbjct: 48   ESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPP-EVMIDVFSLNK 106

Query: 2478 --EADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVL 2305
              +A  E  T+  D L N+ Y+ +I  F  L  + DA++L+  + +I+    +DI PIVL
Sbjct: 107  FTQAVQEGETKTPDQL-NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVL 165

Query: 2304 APDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXX 2125
            +PDSDK+HR  +HNFFK NL FLVTDT+DGP++ +KC+R+R    N              
Sbjct: 166  SPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNKGRNSKK----- 220

Query: 2124 XXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEAL 1951
                                  + GD+ +DSRG+  W E  GKFLRFHLYKENKDTQEAL
Sbjct: 221  --------------------RKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEAL 260

Query: 1950 NVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNA 1771
             +IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ ASRLA+LN RL GIK+GDFCYV  
Sbjct: 261  GLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKD 320

Query: 1770 GLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGA 1591
              +LGQL GNRFTI LRG+ A++E  IK + + LG++GF+NYFGLQRFGSGS+ TH IGA
Sbjct: 321  DFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGA 380

Query: 1590 ALLRGEWKTAIDLILDPREGEREDV------------------REAREYYRSSNDIDGTL 1465
             LLRGEW+ A   ILDPREG+   +                  + AREYY+ + DI+GTL
Sbjct: 381  TLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCLTTQRAREYYKETGDIEGTL 440

Query: 1464 RRMPRHLIAEKAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYG 1285
            R++PRHL+AE+A+L  LKK P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R++KYG
Sbjct: 441  RQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYG 500

Query: 1284 AKSIAVGDLVYCKRPEVTSAQGGGQNIETSEENAENDLETLYESTDSEVFLDNNTEVKVV 1105
            +  + +GDLVYCK  +    +      E +      D   L E + +++    N  VK +
Sbjct: 501  SNEVVLGDLVYCKGNDAEKVKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAI 560

Query: 1104 NSDDIESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMN 925
             + DI +G Y IEDVVLP+PGS+I+YP NDIA V+HDMAKKD +SL ES H++KEFSI +
Sbjct: 561  TAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITS 620

Query: 924  ISGGYRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDK 745
            ++G YRR+ QKPIDF W+++ Y D    L+ETD D + K+   +    E P+  T   D 
Sbjct: 621  MTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQDS 680

Query: 744  D--ADACSLAATDKKCS--------DKDNSEPSTDTVCSSHI-----ALQLAFTLPTSCY 610
                +       DKK S         ++   P   ++  S+      AL+LAFTLP SCY
Sbjct: 681  SDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCY 740

Query: 609  ATMAIRELLKTSTSTQYHKSLD 544
            ATMAIRELLKTSTS  +HK+L+
Sbjct: 741  ATMAIRELLKTSTSVAFHKTLN 762


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  687 bits (1774), Expect = 0.0
 Identities = 372/742 (50%), Positives = 489/742 (65%), Gaps = 28/742 (3%)
 Frame = -3

Query: 2685 FSLIDQMAEEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEV 2506
            F  +    EE+DVGI CY + VPGFRGILKQRY+DFIVNEVD  GNVV LT L  P + V
Sbjct: 45   FKTLMTTIEESDVGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIV 104

Query: 2505 KASQMAVVKEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKD-F 2329
            + ++         E+  E ++ +G   Y+ +I++F  L  +AD ++L+  + ++  +D  
Sbjct: 105  EVAE---------EREEEITNQVGKN-YAAEIESFRELAGDADTQRLEAFINQVISEDNC 154

Query: 2328 DDIEPIVLAPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXX 2149
             +I PI+L+PDSDKAHR   HNFFK  L FLVTDT+DGP+  +KC+R+R   +       
Sbjct: 155  INISPILLSPDSDKAHRTATHNFFKEKLKFLVTDTVDGPDASSKCIRVRLNSRGN----- 209

Query: 2148 XXXXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKE 1975
                                             D+ FDSRG+D W E  GKFLRFHLYKE
Sbjct: 210  ------------------INEGNRNSKKRKDRNDKPFDSRGSDHWPEHLGKFLRFHLYKE 251

Query: 1974 NKDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKL 1795
            NKDTQEA+ +IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ ASRLA+LN RL GIK+
Sbjct: 252  NKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNDRLIGIKV 311

Query: 1794 GDFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGS 1615
            GDFCYVN GL+LGQL GNRFT+TLRGV A++E  IK +AD LG++GF+NYFGLQRFGSGS
Sbjct: 312  GDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYFGLQRFGSGS 371

Query: 1614 VGTHAIGAALLRGEWKTAIDLILDPREGE-------REDVREAREYYRSSNDIDGTLRRM 1456
            V TH IGAALLRGEWK A+ +ILDPREG+          +R AREYY+ S+DIDGTLR++
Sbjct: 372  VPTHLIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESDDIDGTLRQL 431

Query: 1455 PRHLIAEKAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKS 1276
            PR+L AE+A+L  LKK P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R+QKYG   
Sbjct: 432  PRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDQ 491

Query: 1275 IAVGDLVYCKRPEVTSAQGGGQNIETSEENAEN--DLETLYESTDSEVFLDNNTEVKV-- 1108
            + VGDLVYCK  + T  + G  N    +++ E+      L E++ +++    +T VKV  
Sbjct: 492  VVVGDLVYCKGDD-TEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERKDTLVKVEQ 550

Query: 1107 -VNSDDIESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSI 931
             VN++D+ +G Y I DV+LP+PGS++ YP NDIA+V+HD+A+KD+++L ES H  KEFSI
Sbjct: 551  AVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESVHSAKEFSI 610

Query: 930  MNISGGYRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKD-NAPLETPSGITML 754
             +++G YRR+ QKP+DF W+I+ Y D    LAETD + L K+   + N   ET    T  
Sbjct: 611  TSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKEEETKKNDTKS 670

Query: 753  HDKDADACSLAATDKKCSDKDNSEPSTDTVCS------------SHIALQLAFTLPTSCY 610
                      +  D   S + N E   +   +            +  AL+L FTLP SCY
Sbjct: 671  PSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVEPLYGPNTRGAQTALKLTFTLPASCY 730

Query: 609  ATMAIRELLKTSTSTQYHKSLD 544
            ATMAIRELLKTSTS  +HK+L+
Sbjct: 731  ATMAIRELLKTSTSVAFHKTLN 752


>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
            gi|557535111|gb|ESR46229.1| hypothetical protein
            CICLE_v10003382mg [Citrus clementina]
          Length = 697

 Score =  686 bits (1771), Expect = 0.0
 Identities = 365/725 (50%), Positives = 492/725 (67%), Gaps = 27/725 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            +E+D GILC+ +++PGFRGILKQRY DFIVNEVD +  VV LT LD P +E         
Sbjct: 5    DESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEA-------- 56

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRI-SVKDFDDIEPIVL 2305
              A     T+ SD L N  Y+ +I++F  L  ++DA+ L+ L+ ++ S K+ D I PIVL
Sbjct: 57   --AVEHNETKASDQL-NRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVL 113

Query: 2304 APDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRY--------FGKNTEXXXX 2149
            + +SDK+HR  +HNFFK N  FLVTDT+DGP+  +KC+R+R          G+N++    
Sbjct: 114  SANSDKSHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKK--- 170

Query: 2148 XXXXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKE 1975
                                          + GD  FDSRG+++W E  GKFLRFHLYKE
Sbjct: 171  ----------------------------RKERGDNPFDSRGSENWPEQLGKFLRFHLYKE 202

Query: 1974 NKDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKL 1795
            NKDTQEAL +I KMLG+ P++FG AGTKDKR+V+TQRVTVFKQRAS+LA+LN RL GI+L
Sbjct: 203  NKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRL 262

Query: 1794 GDFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGS 1615
            GDFCYV  GL+LGQL GNRFTITLRGV  ++E +IK +A+ LG+NGF+NYFGLQRFGSGS
Sbjct: 263  GDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGS 322

Query: 1614 VGTHAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAE 1435
            V TH +GA LLRGEWK+A+ +ILDPREG+   + +AREYY+ ++DIDGTLR++PRHL+AE
Sbjct: 323  VPTHLVGATLLRGEWKSAVKMILDPREGDIL-LFKAREYYKETDDIDGTLRKLPRHLVAE 381

Query: 1434 KAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLV 1255
            +AIL  LKK P N++QAL  IPR LR+MYVHSYQS+LWNHA++AR+QK+G + + VGDLV
Sbjct: 382  RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLV 441

Query: 1254 YCKRPEVTSAQG-GGQNIETSEENAENDLETLYESTDSEVFLDNNTEVKVVNSDDIESGK 1078
            +CK  +     G      E    N  +D   L E  +++     +  VK V ++DI SGK
Sbjct: 442  FCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGK 501

Query: 1077 YAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLV 898
            Y I+DVVLPLPGS+++YP ND+A+V+H +A+KD ++L ES H+VKEFSI +++G YRR+ 
Sbjct: 502  YTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVF 561

Query: 897  QKPIDFTWKIMKYEDPGQTLAETDHDLLQKS-----LKKDNA----PLETPSGITMLHDK 745
            QKP+DF W+++ Y D  + LAETD D + K      +K++ A      + PS      + 
Sbjct: 562  QKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDPSDCMKQSES 621

Query: 744  DADACSLAATDKKCS-DKDNSEPSTDTVCSS-----HIALQLAFTLPTSCYATMAIRELL 583
             +    L+  + + +  K+  +P  ++VC +      +AL+L  TLP+SCYATMAIRELL
Sbjct: 622  LSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELL 681

Query: 582  KTSTS 568
            KTSTS
Sbjct: 682  KTSTS 686


>ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Cicer arietinum]
          Length = 698

 Score =  684 bits (1765), Expect = 0.0
 Identities = 357/734 (48%), Positives = 487/734 (66%), Gaps = 28/734 (3%)
 Frame = -3

Query: 2661 EEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 2482
            EE DVGI CY +++PGFRG+LKQRY+DFIVNEVD +G VV L+ L+A  +E K       
Sbjct: 5    EEHDVGISCYISNLPGFRGVLKQRYSDFIVNEVDIDGKVVELSSLEASAEESKVPVDESK 64

Query: 2481 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLA 2302
               +N+ +T +S+ +    Y+ QI++F+ L  E+DA  L+  + +I+V   D   PI+L+
Sbjct: 65   SVQENKTNTSESEVIS---YASQIESFKSLAGESDASSLEEFINQINVGGEDSPSPIILS 121

Query: 2301 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXXX 2143
            PDSDK+HR  VH FF+ N  FLVTDT+DGP+  +KC+R+R         GKN+       
Sbjct: 122  PDSDKSHRTAVHVFFRENFKFLVTDTVDGPDASSKCIRVRLNSGGPNNKGKNSRK----- 176

Query: 2142 XXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 1969
                                           ++ FDSRG+++W E  GKFLRFHL+KENK
Sbjct: 177  --------------------------RKDRDNKPFDSRGSENWPENAGKFLRFHLFKENK 210

Query: 1968 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 1789
            DTQEAL V+G MLG++ ++FG AGTKDKRAVTTQRVTV+KQ+A +LASLN +L+GIK+GD
Sbjct: 211  DTQEALGVLGNMLGIKSRSFGFAGTKDKRAVTTQRVTVYKQQARKLASLNEKLFGIKVGD 270

Query: 1788 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1609
            FCYVN GL LGQL GNRFTITLRG+ A++   IK AAD LG++GF+NYFGLQRFGSGSV 
Sbjct: 271  FCYVNEGLCLGQLLGNRFTITLRGIVADSVDTIKAAADSLGRHGFINYFGLQRFGSGSVP 330

Query: 1608 THAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKA 1429
            TH IGAAL RGEWK A+DLILDPR+GER  + +AR+YY+ +ND+ GTL+++P+ L+AE+A
Sbjct: 331  THRIGAALFRGEWKLAVDLILDPRDGERYVIAKARKYYKDTNDVAGTLKQLPQFLVAERA 390

Query: 1428 ILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYC 1249
            +L  LK+ P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R+QKYG + + +GDLVYC
Sbjct: 391  VLKSLKQFPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTEQVVLGDLVYC 450

Query: 1248 KRPEVTSAQGGGQNIETSEENAENDLETLYEST-----DSEVFLDNNTEVKVVNSDDIES 1084
            K    + A       E      ++D   +Y+S        ++   +N+ VK VN++D+ S
Sbjct: 451  KENPPSKA------TEIVGSECDDDCGDIYDSNIEDEIPEDIHDKSNSSVKAVNAEDLNS 504

Query: 1083 GKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRR 904
              Y I+DV+LP+PGS+ +YP NDI +V++D+  KD +SL E+ H+ KEFS+ +++G YRR
Sbjct: 505  KSYTIDDVILPMPGSRSIYPANDIVKVYNDLTNKDGISLTENVHNAKEFSMTSVTGSYRR 564

Query: 903  LVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKD-------NAPLETPSGITMLHDK 745
            + QKPI+F W+++ Y D  + L ETD D + KS + +       N   ET +   +   +
Sbjct: 565  VFQKPINFEWELLTYTDSNKPLVETDLDKIGKSKRTNVHAVGASNGQKETTAFDCIRQVE 624

Query: 744  DADACSLAATD-------KKCSDKDNSEPSTDTVCSSHIALQLAFTLPTSCYATMAIREL 586
             +D      TD       +     D S P + +   SH AL+L FTLP+SCYATMAIREL
Sbjct: 625  SSDDGVKVETDYDENASKEVILPHDESVPDSSSK-DSHTALKLTFTLPSSCYATMAIREL 683

Query: 585  LKTSTSTQYHKSLD 544
            LKTSTS  Y K+L+
Sbjct: 684  LKTSTSVAYQKTLN 697


>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Glycine max]
          Length = 687

 Score =  684 bits (1765), Expect = 0.0
 Identities = 367/738 (49%), Positives = 494/738 (66%), Gaps = 31/738 (4%)
 Frame = -3

Query: 2664 AEEADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAV 2485
            AEE +VGI C+ +D+ GFRGILKQRY+DFIVNEVD +G VV+L+ LDAP +E +      
Sbjct: 6    AEEHEVGISCFISDLRGFRGILKQRYSDFIVNEVDRDGAVVQLSSLDAPLEEPE------ 59

Query: 2484 VKEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVL 2305
                  E  T   D + +  Y+ QI++F+ L  E DA  L+  + +I+    D + PIVL
Sbjct: 60   ------ENRTNTHDTVVS--YASQIESFKSLAEEYDAILLEEFINKINAGGEDSVSPIVL 111

Query: 2304 APDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXX 2146
            +PDSDK+HR  +HNFFK N  FLVTD ++GP+  +KC+R+R         GKN++     
Sbjct: 112  SPDSDKSHRKAMHNFFKENFKFLVTDVVNGPDASSKCIRVRLNSAEPNNKGKNSKK---- 167

Query: 2145 XXXXXXXXXXXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKEN 1972
                                         +  D+ FDSRG+++W E  GKFLRFHLYKEN
Sbjct: 168  ---------------------------RKERDDKPFDSRGSENWPENVGKFLRFHLYKEN 200

Query: 1971 KDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLG 1792
            KDT EAL VIG ML ++PK+FG AGTKDKRAVTTQRVTV+KQ+ASRLASLN RL+GIKLG
Sbjct: 201  KDTHEALGVIGNMLSIQPKSFGFAGTKDKRAVTTQRVTVYKQQASRLASLNKRLFGIKLG 260

Query: 1791 DFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSV 1612
            DFCYV  GL LGQL GNRFTITLRG+ A++E IIK +AD LG++GF+NYFGLQRFGSGS+
Sbjct: 261  DFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSL 320

Query: 1611 GTHAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEK 1432
             TH IGAALLRGEWK A+D+ILDPR+GE+  + +AR+YY+ S+D+ GTL+++PR+L+AE+
Sbjct: 321  PTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAER 380

Query: 1431 AILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVY 1252
            A+L  LK  P N++QAL  IPR LR++YVHSYQSYLWNHA++ R+QKYG +++ +GDLVY
Sbjct: 381  AVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVY 440

Query: 1251 CKRPEVTSAQGGGQNIETSEENAENDLETLYESTD-----SEVFLDNNTEVKVVNSDDIE 1087
            CK          G+  E        D    Y+S +      E+  + N+ VKV++++D+ 
Sbjct: 441  CKE------NSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSGEIHEEINS-VKVIDAEDLN 493

Query: 1086 SGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYR 907
            SG Y I+DV+LP+PGS++ YP N IA V+ D+AKKD +SL ES H+V++FSI +I+G YR
Sbjct: 494  SGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYR 553

Query: 906  RLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADAC- 730
            R+ QKPI+F W+++ Y D  + L +TD D + KS      P+ T   +   + K+ +A  
Sbjct: 554  RVFQKPINFEWELLSYSDSSEQLVDTDLDKINKS-----KPMNTVKQMGAANGKNEEAFD 608

Query: 729  ---SLAATDKKCSDKDNSE--------PSTDTVC-----SSHIALQLAFTLPTSCYATMA 598
                L ++D     ++ SE        P  +++       S IAL+L+FTLP SCYATMA
Sbjct: 609  CIRELESSDDIAKVENYSEILGEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMA 668

Query: 597  IRELLKTSTSTQYHKSLD 544
            IRELLKTSTS  YHK+L+
Sbjct: 669  IRELLKTSTSVAYHKTLN 686


>ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
            [Setaria italica]
          Length = 685

 Score =  682 bits (1759), Expect = 0.0
 Identities = 356/708 (50%), Positives = 473/708 (66%), Gaps = 4/708 (0%)
 Frame = -3

Query: 2658 EADVGILCYTTDVPGFRGILKQRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVVK 2479
            E + GI C+ + +PGFRG+LK RY+DFIV+EV  +G VV+LT  D P      S+   VK
Sbjct: 9    EVEAGISCFASSLPGFRGVLKHRYSDFIVHEVARDGTVVQLTSFDLP------SECVDVK 62

Query: 2478 EADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISVKDFDDIEPIVLAP 2299
            E +    +  +D      +S+ +++F  L  +AD + L+ LL R++     D+ P++L+P
Sbjct: 63   EEEKAAPSADAD------HSQALESFRALCGDADCDALRGLLERVAAGGDGDVSPVILSP 116

Query: 2298 DSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXXX 2119
            D+DKAHR EVHNFFK N  FLVTDT++  +   +C+R+R  G                  
Sbjct: 117  DADKAHRSEVHNFFKKNFKFLVTDTVEHSDGIQRCIRVR-LGSGAGGGRGCGGGGRGKGR 175

Query: 2118 XXXXXXXXXXXXXXXKYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALNV 1945
                              +D   D+ FDSRG+ +W +  GKFLRFHLYKENKDTQEAL +
Sbjct: 176  KRKNMGG-----------SDWRDDRPFDSRGSSNWSDSVGKFLRFHLYKENKDTQEALGI 224

Query: 1944 IGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAGL 1765
            IGKMLGL+P++FG AGTKDKRAVT Q+VTVFK +A+RLA+LN RL+GIK+G+FCYV  GL
Sbjct: 225  IGKMLGLQPRSFGFAGTKDKRAVTLQQVTVFKVQANRLAALNNRLFGIKVGNFCYVKEGL 284

Query: 1764 VLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAAL 1585
            VLGQL GN+FTITLRGV AE+E +IK AADGLGKNGF+NY+GLQRFGSGS+ TH +GAAL
Sbjct: 285  VLGQLMGNQFTITLRGVIAESEDVIKAAADGLGKNGFINYYGLQRFGSGSIPTHLVGAAL 344

Query: 1584 LRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKKD 1405
            LRGEWK A++LILDPREGER+D+ E R++Y+   DID  LR  PRHL+AE+AIL  LKK 
Sbjct: 345  LRGEWKAAVNLILDPREGERDDINEVRKHYKEHGDIDKALRNFPRHLVAERAILQCLKKC 404

Query: 1404 PSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKR--PEVT 1231
            P N++QAL  IPR LR+MYVHSYQSYLWNHA++ R++KYG   +  GDLVY K   PE +
Sbjct: 405  PGNYLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVEKYGMSQVVEGDLVYNKESPPEES 464

Query: 1230 SAQGGGQNIETSEENAENDLETLYESTDSEVFLDNNTEVKVVNSDDIESGKYAIEDVVLP 1051
            ++    +  +    ++E DL    E+   E        VK+V+S D+  G Y  +DVVLP
Sbjct: 465  TSVDIAETDDGHTNSSEIDL--CSEAQPEETI----QSVKIVDSGDLLKGMYTFDDVVLP 518

Query: 1050 LPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWK 871
            LPGS+ ++P N++A+++H+MAKKD +SL+E++H VKEFSI ++ GGYRR+ Q+PIDF W+
Sbjct: 519  LPGSQAMFPGNEVAEIYHEMAKKDGISLMENAHGVKEFSITSMKGGYRRVFQRPIDFQWE 578

Query: 870  IMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADACSLAATDKKCSDKD 691
            +M Y D   +LAETD D+L +   K+   L T        +KD+D  +         +K 
Sbjct: 579  LMTYTDDSSSLAETDLDVLSRIKPKEANELVTTDQSQDKLEKDSDTSTPTNGSDSLENKP 638

Query: 690  NSEPSTDTVCSSHIALQLAFTLPTSCYATMAIRELLKTSTSTQYHKSL 547
               P T       +A++L FTLP SCYATMAIRELLKTSTS  Y K+L
Sbjct: 639  TGSPDT---APRKMAIKLVFTLPASCYATMAIRELLKTSTSVAYQKTL 683