BLASTX nr result
ID: Ephedra26_contig00015217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00015217
(945 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi... 125 2e-26
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi... 125 3e-26
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis] 124 5e-26
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe... 123 1e-25
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr... 122 3e-25
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi... 120 6e-25
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A... 120 1e-24
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi... 118 4e-24
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea] 117 8e-24
gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protei... 117 8e-24
ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containi... 116 1e-23
ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citr... 116 1e-23
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus... 115 2e-23
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi... 115 2e-23
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,... 114 5e-23
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi... 113 9e-23
gb|ESW11349.1| hypothetical protein PHAVU_008G022600g [Phaseolus... 113 9e-23
ref|XP_002305302.1| predicted protein [Populus trichocarpa] 113 9e-23
ref|XP_002305305.1| pentatricopeptide repeat-containing family p... 112 2e-22
ref|XP_002321639.2| pentatricopeptide repeat-containing family p... 112 2e-22
>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 125 bits (315), Expect = 2e-26
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 1/225 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QLVY LC A + +EACK++ M+ G KTW ++ + A E DKA+ F KM+
Sbjct: 410 YSQLVYGLCKARKLEEACKLLDEMEACGCVPDIKTWTILIQGHCAAKEVDKALICFAKMM 469
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E C+ + + ++ R AY L+ +++ + P TY +INKL G L
Sbjct: 470 EKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNTAHLVPWQATYKLMINKLLGVRKL 529
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLI-XXXXXXXXXXKACVCMMKAF 408
E+A + LMK+ YPP+ + E I+K GTV++A + A V + ++F
Sbjct: 530 EEAINLLHLMKKQNYPPFPEPFIEYISKFGTVEDAGEFLNALSAKKYPSQSAYVHVFESF 589
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSGTPTSEDSTE 273
+ GR+SE DL+ K PH+I DI L G+ SE +TE
Sbjct: 590 FQEGRESEAKDLLYKCPHHIRKHPDICKL-----FGSAKSEYATE 629
>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 125 bits (313), Expect = 3e-26
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+Q+V+ LC A + DEACK++ M++ G KTW ++ + ANE DKA+ F KM+
Sbjct: 409 YSQVVFGLCKAKKLDEACKLLDDMEENGCVPDIKTWMILIQGHCAANEIDKALICFAKMM 468
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E C + ++ L K + AY L+ +++ ++P T+ +I L G+ L
Sbjct: 469 EKECKADADILDVLINGLIKQAKVDGAYKLLIEMLNTAHVRPWQATFKNLIQNLLGARKL 528
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKAC-VCMMKAF 408
E+A ++ LMK+ GYPPY + I+K G+V++A A V + K+F
Sbjct: 529 EEAMELLCLMKKQGYPPYPEPFVGYISKFGSVEDASEFFKALSVKEYPSNAAYVHVFKSF 588
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSGTPTS 288
+ GR SE DL+ K PH+I ++ L T T+
Sbjct: 589 FKEGRHSEAKDLLYKCPHHIRKLGEVRKLFGATERSKTTA 628
>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
Length = 628
Score = 124 bits (311), Expect = 5e-26
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QLV+ LC A R +EA +++ M+ G KTW ++ + A E DK + F+KM+
Sbjct: 409 YSQLVFGLCKARRLEEARRVLDEMEANGCTPDIKTWTILIQGHCSAGEVDKGLMCFMKMM 468
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E CNV + ++ + AY+L+ ++++ ++ P TY +I K+ L
Sbjct: 469 EEDCNVDGDLLDVLIKGFLSQRKIKGAYDLLIELVDKARVIPWQATYKNLIEKMLEVRKL 528
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLI-XXXXXXXXXXKACVCMMKAF 408
E+A + LMK+H YPPY D I+K GTV+EA + A + ++F
Sbjct: 529 EEAMNLLRLMKKHKYPPYHDPFVPYISKFGTVEEAAEFLKALSVKKNPSPSAYFHIFESF 588
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSGTPTS 288
+ GR SE DL+ K PH+I DI L T S T+
Sbjct: 589 FREGRHSEAKDLLFKCPHHIRKHRDIAKLFGSTQSSPATA 628
>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
Length = 646
Score = 123 bits (308), Expect = 1e-25
Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QLV+ LC A R +EACK++ M+ G TW ++ + ANE D A+ F KM+
Sbjct: 427 YSQLVFGLCKAKRLEEACKVLDEMEANGCVPDIMTWTILIQGHCAANEVDTALVCFAKMI 486
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E GC+ + ++ K + AY L+ +++ +++P TY +I L G L
Sbjct: 487 EKGCDADADLLDVLINGFLKQRKIEGAYKLLIEMVNMTRLRPWQATYKNLIENLLGVRKL 546
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKAC-VCMMKAF 408
++AF + LMK+ YPPY D + ++K G+V++A A V + K+F
Sbjct: 547 DEAFALLHLMKKQSYPPYPDPFVQYLSKFGSVEDAAEFFKALSVKEYPSSAAYVHVFKSF 606
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSGTPTS 288
+ GR SE +L+ K P++I +I L G++ G T+
Sbjct: 607 FKEGRDSEAKELLYKCPYHIRKLGEISKLF-GSTEGKQTA 645
>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
gi|557542189|gb|ESR53167.1| hypothetical protein
CICLE_v10019266mg [Citrus clementina]
Length = 639
Score = 122 bits (305), Expect = 3e-25
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 4/227 (1%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+Q+++ LC AGRF++AC ++ M++ G KTW ++ + ANE D+A+ F KM+
Sbjct: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E + + ++ R AY L+ ++IE + ++P T+ +I KL G+ L
Sbjct: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVHLRPWQATFKTLIEKLLGARRL 530
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKAC-VCMMKAF 408
E+A + LMK+ YPP+ + + I+K GT ++A + A + + ++F
Sbjct: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKFGTAEDASEFLKALSVKEYPSSAAYLQVFESF 590
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSL---SKGTSSGTPTSEDST 276
++ GR E DL+ K PH+I S I L +K P+ ++ST
Sbjct: 591 FNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVTIPSRKEST 637
>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Citrus sinensis]
Length = 639
Score = 120 bits (302), Expect = 6e-25
Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 4/227 (1%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+Q+++ LC AG F++AC ++ M++ G K+W ++ + ANE D+A+ F KM+
Sbjct: 411 YSQVIFGLCKAGSFEDACNVLDEMEENGCIPDIKSWTILIQGHCAANEVDRALLCFAKMM 470
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E + + ++ R AY L+ ++IE ++++P T+ +I KL G+ L
Sbjct: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKAC-VCMMKAF 408
E+A + LMK+ YPP+ + + I+K GTV++A + A + + ++F
Sbjct: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESF 590
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSL---SKGTSSGTPTSEDST 276
++ GR E DL+ K PH+I S I L +K P+ ++ST
Sbjct: 591 FNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVTIPSRKEST 637
>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
gi|548855973|gb|ERN13836.1| hypothetical protein
AMTR_s00049p00223850 [Amborella trichopoda]
Length = 570
Score = 120 bits (300), Expect = 1e-24
Identities = 70/209 (33%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QL++ LC A RFDEACK + M+ G KTW ++ + A E +A++ F KM+
Sbjct: 352 YSQLIFGLCKAHRFDEACKFLDEMEALGCTPDLKTWTILIQGHCLAGEVKEALSCFKKML 411
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
G + + +VA C +R DAY L+ ++ +KP TY +I L G ML
Sbjct: 412 GKGVEADADLLEVLVAGFCNQNRPEDAYTLLSVMMTKTHLKPWQATYKILIEGLLGRRML 471
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKAC-VCMMKAF 408
E+A K+ LMK+ P ++D I+K+G ++A L+ A V + +AF
Sbjct: 472 EEALKLLLLMKKQKLPAFVDPFIGYISKNGMAEDAMDLLKTLTLGQNPSSAVYVNIFEAF 531
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSL 321
GR ++ DL+ +FPH+I +DI L
Sbjct: 532 MKEGRFTDAQDLLHRFPHHIRKHADISKL 560
>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 118 bits (295), Expect = 4e-24
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+Q+V+ LC RF+EACK++ M+ KTW ++ + ANE DKA+ F KM+
Sbjct: 409 YSQMVFGLCKMRRFEEACKVLEDMESSRCIPDIKTWTILIQGHCSANEVDKALLCFAKMI 468
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E GC+ + + R AY L+ ++ +I P TY ++I KL G
Sbjct: 469 EKGCDPDADLLDVLADGFLSQKRIEGAYELVAEISRKCRISPWQATYKKLIEKLLGVMKF 528
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLI-XXXXXXXXXXKACVCMMKAF 408
E+A ++ LMK H YPPY I+K G+V++A + + V + ++
Sbjct: 529 EEALELLRLMKSHNYPPYHLPFVPYISKFGSVEDAEAFLKALSVKSYPSHIVYVQVFESL 588
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSL--SKGTSSGT 297
+ GR SE DL+ K PH+I S I L S T S T
Sbjct: 589 FREGRLSEAKDLLYKTPHHIRTHSKICKLFGSSETKSDT 627
>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
Length = 627
Score = 117 bits (292), Expect = 8e-24
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QLV+ LC RFDEA ++ +M+K G TW ++ ++ ETDKA+ F +M+
Sbjct: 414 YSQLVFGLCKFDRFDEAAGVLESMEKWGCKPDIMTWTILIRGHFKGGETDKAMLHFARMM 473
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E G + + + +V L K R DA+ L+ ++ E LK++P T+ +I +L
Sbjct: 474 EKGFDPDADLLEAIVDELSKKSRAPDAFRLLVELAEKLKLRPWQSTFKNLIQQLLDGRRF 533
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKACV-CMMKAF 408
E+A ++ +MK+ YPP+ + + ++K G+VD+A + + + AF
Sbjct: 534 EEAVRLLAMMKRQNYPPHCEPFVDYVSKFGSVDDALEFLSSLTVKEYPSISSYRHVFGAF 593
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSL 321
+ R SE DL+ + PH++ + SL
Sbjct: 594 LNENRHSEAKDLLFRCPHHVRKHPAVCSL 622
>gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 660
Score = 117 bits (292), Expect = 8e-24
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Frame = -2
Query: 941 AQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMVE 762
+++ ++L +AG+ DE + + + NL K W + E A + + A A+F MVE
Sbjct: 435 SKIAFRLASAGKKDETAEFMDHVAASNTNLDHKAWGSLIEGCCAAGDLETASAYFQNMVE 494
Query: 761 S-GCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
G + A + +V C R +DA L+ K + + +++P + TY E+I KL G
Sbjct: 495 KEGVSHAGYAFEWLVNSYCSRKRAMDACKLLHKYVSENQLRPWHTTYKELIRKLLAQGGF 554
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKACVC-MMKAF 408
+ LMK HG+PP++D + ++KSG+ ++A + + + V + +AF
Sbjct: 555 RDGLSLLGLMKDHGFPPFVDPFIDYVSKSGSSEDAIAFLKSMTSKRFPSLSVVLRVFEAF 614
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSG 300
+ RQ+E DL+SK P Y+ N +D+L+L +SG
Sbjct: 615 FKAARQNEAQDLLSKCPGYVRNHADVLNLFCSKNSG 650
>ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Citrus sinensis]
Length = 671
Score = 116 bits (291), Expect = 1e-23
Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 2/216 (0%)
Frame = -2
Query: 941 AQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMVE 762
+++ ++L +AG+ DEA + + M+ G ++ K W + + A + DKA F KMVE
Sbjct: 447 SKIAFRLSSAGKKDEANEFMDHMEASGSDVGDKMWVSLIKGHCVAGDLDKAADCFQKMVE 506
Query: 761 S-GCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
G + A +V C +R +DA + + + +KP + TY E+I L
Sbjct: 507 KEGTSHAGYAIDLLVNTYCSKNRAIDACKFVHNCVREYDLKPWHTTYEELIKNLLVQRGF 566
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKACV-CMMKAF 408
+ A + LMK HG+PP++D + ++KSGT D+A + + + V C+ AF
Sbjct: 567 KDALSLLCLMKDHGFPPFVDPFIKYVSKSGTSDDAIAFLKGMTSKRFPSMSVVLCLFAAF 626
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSG 300
+ R SE DL+SK P Y+ N +D+L+L SG
Sbjct: 627 FQARRHSEAQDLLSKCPRYVRNHADVLNLLYSKKSG 662
>ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citrus clementina]
gi|557532932|gb|ESR44115.1| hypothetical protein
CICLE_v10011236mg [Citrus clementina]
Length = 671
Score = 116 bits (290), Expect = 1e-23
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 2/216 (0%)
Frame = -2
Query: 941 AQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMVE 762
+++ ++L +AG+ DEA + + M+ G ++ K W + + A + DKA F KMVE
Sbjct: 447 SKIAFRLSSAGKKDEANEFMDHMEASGSDVGDKMWVSLIKGHCVAGDLDKAADCFQKMVE 506
Query: 761 S-GCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
G + A +V C +R +DA + + + +KP + TY E+I L
Sbjct: 507 KEGTSHAGFAIDLLVNTYCSKNRAIDACKFVHNCVCEYDLKPWHTTYKELIKNLLVQRGF 566
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKACV-CMMKAF 408
+ A + LMK HG+PP++D + ++KSGT D+A + + + V C+ +AF
Sbjct: 567 KDALSLLCLMKDHGFPPFVDPFIKYVSKSGTSDDAIAFLKGMTSKRFPSMSVVLCLFEAF 626
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSG 300
+ R SE DL+SK P YI N +D+L+L SG
Sbjct: 627 FQARRHSEAQDLLSKCPRYIRNHADVLNLLYSKKSG 662
>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
Length = 631
Score = 115 bits (288), Expect = 2e-23
Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 1/209 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+Q+VY LC RF+EACK++ M+ G KTW ++ + +ANE +KA+ F KM+
Sbjct: 407 YSQVVYGLCKMRRFEEACKVLEEMESCGCIPDIKTWTILIQGHCDANELEKALLCFSKMI 466
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E CN + +V R AY + ++ +I P TY ++I KL
Sbjct: 467 EKDCNPDADLLDVLVDGFFSQKRIQGAYEVFIEISRKCRISPWQATYKKLIEKLLEVTKF 526
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKAC-VCMMKAF 408
E+A ++ LMK H YPPY I+K G+V++A + + V + ++
Sbjct: 527 EEALELLRLMKTHNYPPYHLPFVPYISKFGSVEDAEAFLKALSAKSYPSHVVYVQVFESL 586
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSL 321
+ GR SE DL+ K PH+I S I L
Sbjct: 587 FQEGRLSEAKDLLYKTPHHIRTHSKISKL 615
>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
gi|449524136|ref|XP_004169079.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
Length = 632
Score = 115 bits (288), Expect = 2e-23
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QLV+ LC A R +EA K++ M+ +G KTW ++ + ANE D A+ F KM+
Sbjct: 403 YSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMI 462
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E C+ + +++ + AY L+ ++ ++P TY ++I L L
Sbjct: 463 EKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKL 522
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLI-XXXXXXXXXXKACVCMMKAF 408
E+A + LMK+ YPP+ + + I+K GTV +A + A + + +F
Sbjct: 523 EEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSF 582
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSGTPTSEDSTEN 270
++ GR SE DL+ K PH+I +++ L S T + S+ N
Sbjct: 583 FNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTAATQSSSN 628
>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 627
Score = 114 bits (285), Expect = 5e-23
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QLV+ LC A R +EAC+++ M+ G KTW ++ + ANE KA+ KM+
Sbjct: 408 YSQLVFGLCKARRLEEACEVLDEMEAHGCLPDIKTWTILIQGHCVANEVGKALMCLAKMM 467
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E C+ + ++ R AY L +++ +++P TY +I KL L
Sbjct: 468 EKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDMVDKARLRPWQATYKLLIEKLLEVRKL 527
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLI-XXXXXXXXXXKACVCMMKAF 408
E+A + LMKQH +PP+ + + I++ GTVD+A + A + + ++F
Sbjct: 528 EEALNLLRLMKQHNHPPFPEPFVQYISRFGTVDDAADFLKALSVKEYPSTSAYLNVFQSF 587
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSGTPTSEDST 276
+ GR SE DL+ K PH+I I L G+ +ED+T
Sbjct: 588 FRAGRHSEAKDLLFKCPHHIRKHPKISEL-----FGSAKTEDAT 626
>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 642
Score = 113 bits (283), Expect = 9e-23
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QL+Y LC R +EA K+I M++ G KTW ++ + A E DKA+ F KM+
Sbjct: 412 YSQLIYGLCKVRRLEEASKVIDVMEECGCIPDIKTWTVLIQGHCFAGEVDKALFCFAKMM 471
Query: 764 ESGCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
E + + ++ R AY L+ +++ +++P TY +I KL G
Sbjct: 472 ERNVDTDADLLDVLLNGFLSQRRVFGAYQLLTELVNKFQMRPWQATYKLVIQKLLGERKF 531
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLI-XXXXXXXXXXKACVCMMKAF 408
E+A + MK+H YPP+ + + I+KSGTV++A + A + ++F
Sbjct: 532 EEALDLLRRMKKHNYPPFPEPFLQYISKSGTVEDAVEFLKALSVKDYPSVSAYQHVFQSF 591
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSL--SKGTSSG 300
++ GR SE DL+ K PH+I I L S ++SG
Sbjct: 592 FAEGRHSEAKDLLYKCPHHIRQHPAICGLFGSSNSNSG 629
>gb|ESW11349.1| hypothetical protein PHAVU_008G022600g [Phaseolus vulgaris]
Length = 629
Score = 113 bits (283), Expect = 9e-23
Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 2/209 (0%)
Frame = -2
Query: 941 AQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMVE 762
+++ ++L AG ++A + ++ ++ G N KTW+ + E A DKA F +MV+
Sbjct: 404 SKIAFRLSAAGNIEQAHEFVYRVEASGCNANRKTWESLIEGHCVAGNIDKAFDSFKEMVD 463
Query: 761 SGCNVKYNATQNVVAR-LCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGML 585
T +V+ LC+ +R +DA ++C+++ + ++KP + TY ++ KL G
Sbjct: 464 KEGITSAGYTFDVLMNSLCQMNRAIDACKILCRLVNEKQLKPWHSTYKLLVTKLLDQGGF 523
Query: 584 EKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKAC-VCMMKAF 408
A I LM+ HG+PP+ D E ++KSG+ D+A + + + M++AF
Sbjct: 524 ADALPILGLMRNHGFPPFTDPFIEHLSKSGSYDDAVLFLRAMTSKRFPSTSVFLRMLEAF 583
Query: 407 YSVGRQSEIPDLVSKFPHYIANSSDILSL 321
+ GR E + +SK P +I N D+L+L
Sbjct: 584 FKHGRHEEAHNFLSKCPRFIRNDVDVLNL 612
>ref|XP_002305302.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 113 bits (283), Expect = 9e-23
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Frame = -2
Query: 938 QLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMVES 759
++ + L +AG+ DEA + ++ M+ GR+L K W + E + + +KA F MVE
Sbjct: 404 KIAFGLTSAGKNDEANEFVNHMESSGRDLSYKAWASLIEGHCVSGDLEKASDCFKIMVEK 463
Query: 758 -GCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGMLE 582
G + A + +V C +R +DA NL+C + + P TY +I+KL G +
Sbjct: 464 KGVSGAGYAVELLVNAYCLKNRAMDACNLLCDYVCQNHLCPWQTTYKVLISKLLVQGAFK 523
Query: 581 KAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKA-CVCMMKAFY 405
A + LM+ HG PP++D +E ++KSGT D+A + + + + M KAF+
Sbjct: 524 DALNLLGLMQSHGIPPFIDPFFEFVSKSGTGDDAIAFMNAMTTKKFPSISVALRMFKAFF 583
Query: 404 SVGRQSEIPDLVSKFPHYIANSSDILSL 321
R E D +SK P YI N +D+L+L
Sbjct: 584 KAKRHGEAQDFLSKCPIYIRNRADVLNL 611
>ref|XP_002305305.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848269|gb|EEE85816.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 646
Score = 112 bits (281), Expect = 2e-22
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Frame = -2
Query: 938 QLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMVES 759
++ + L +AG+ DEA + ++ M+ GR+L K W + E + + +KA F MVE
Sbjct: 422 KIAFGLTSAGKNDEANEFVNHMESSGRDLSYKAWASLIEGHCVSGDLEKASDCFKIMVEK 481
Query: 758 -GCNVKYNATQNVVARLCKGDRELDAYNLMCKVIEDLKIKPSYETYLEIINKLAGSGMLE 582
G + A + +V C + +DA NL+C + + P TY +I+KL G +
Sbjct: 482 KGVSGAGYAVELLVNAYCLKNTAMDACNLLCDYVCQNHLCPWQTTYKVLISKLLVQGAFK 541
Query: 581 KAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLIXXXXXXXXXXKA-CVCMMKAFY 405
A + LM+ HG PP++D +E ++KSGT D+A + + + + M KAF+
Sbjct: 542 DALNLLGLMQSHGIPPFIDPFFEFVSKSGTGDDAIAFMNAMTTKKFPSISVALRMFKAFF 601
Query: 404 SVGRQSEIPDLVSKFPHYIANSSDILSL--SKGTSSGTPTSEDS 279
R E D +SK P YI N +D+L+L SK S+ T ++ S
Sbjct: 602 KAKRHGEAQDFLSKCPIYIRNRADVLNLFCSKKFSNDTTATDVS 645
>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322390|gb|EEF05766.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 486
Score = 112 bits (280), Expect = 2e-22
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 2/221 (0%)
Frame = -2
Query: 944 YAQLVYKLCNAGRFDEACKIIHAMQKKGRNLCSKTWKLIFESLYEANETDKAVAFFIKMV 765
Y+QLV+ LC + R +EACK++ M+ G KTW ++ + + AN+ DK + +KM
Sbjct: 267 YSQLVFGLCKSKRLEEACKVLDEMEAGGCIPDIKTWTILIQGHFAANQVDKGLLCLVKMT 326
Query: 764 ESGCNVKYNATQNVVARLCKGDRELD-AYNLMCKVIEDLKIKPSYETYLEIINKLAGSGM 588
E + + +V+ + R++D AY + +++ L++ P TY +I KL
Sbjct: 327 EKNTDPDADLL-DVLVKGFLSQRKMDGAYTFLVEMVNKLRLVPWQATYKLLIEKLLQVRK 385
Query: 587 LEKAFKIFDLMKQHGYPPYMDSLYESIAKSGTVDEAYSLI-XXXXXXXXXXKACVCMMKA 411
LE+A + LMK+H YPP+ + + I+K GTV++A + A + M+ +
Sbjct: 386 LEEATDLLRLMKKHNYPPFPEPFDQYISKFGTVEDAVNFFKVLSVKEYPSSVAYLRMLDS 445
Query: 410 FYSVGRQSEIPDLVSKFPHYIANSSDILSLSKGTSSGTPTS 288
F GR SE DL+ K PH+I I L +G T+
Sbjct: 446 FLREGRDSEARDLLFKCPHHIRKDHKISKLFGSAKTGDKTA 486