BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00015079
         (2114 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     205   7e-50
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   203   2e-49
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   202   4e-49
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   202   5e-49
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   200   2e-48
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi...   198   9e-48
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...   195   8e-47
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...   192   4e-46
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   192   5e-46
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]       189   4e-45
ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   187   1e-44
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi...   185   8e-44
gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protei...   183   2e-43
gb|ESW27479.1| hypothetical protein PHAVU_003G205400g [Phaseolus...   180   3e-42
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...   179   6e-42
gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus pe...   177   2e-41
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...   176   3e-41
gb|AFW83859.1| hypothetical protein ZEAMMB73_953172 [Zea mays]        176   3e-41
ref|NP_001132329.1| uncharacterized protein LOC100193771 [Zea ma...   176   3e-41
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...   176   4e-41

>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  205 bits (521), Expect = 7e-50
 Identities = 130/426 (30%), Positives = 219/426 (51%), Gaps = 7/426 (1%)
 Frame = +1

Query: 247  QVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYKP 423
            +V  +++   WS E E++L  +   +S++ VL  L  L   PSKA   F+W   Y  Y+ 
Sbjct: 203  KVVDVVLGLQWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYEH 262

Query: 424  TSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLF 603
             S  YN   RV+ +++ +  FW ++EEM+  G+ ++  ++  +  +F + K  ED  KL+
Sbjct: 263  NSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLY 322

Query: 604  LWLFEDGKDEFSVVKCCQVL----SGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRY 771
             ++  DG  + S   C  +L    +G+         V +K+ +  G+   K  Y+G+HR 
Sbjct: 323  EFMM-DGPFKPSAQDCNLLLRSISAGDNPDCSLAFRVAKKY-ESTGRTLSKAAYDGIHRS 380

Query: 772  LTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMN 951
            LT  GR +EAEK+M+VM   G  + PD+ TY  LV+GLC A RLEEAR+V+ EM   G  
Sbjct: 381  LTSAGRFDEAEKMMKVMRNAG--YEPDNITYSQLVFGLCKARRLEEARRVLDEMEANGCT 438

Query: 952  LEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNRGMDAYNL 1131
             + K W  +I     A + D+ +    +M+E   NV   ++  L      + +   AY+L
Sbjct: 439  PDIKTWTILIQGHCSAGEVDKGLMCFMKMMEEDCNVDGDLLDVLIKGFLSQRKIKGAYDL 498

Query: 1132 MCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPIAKFG 1311
            + + ++  ++ P    Y  ++  +     ++EA+N+L LMK H Y P  D     I+KFG
Sbjct: 499  LIELVDKARVIPWQATYKNLIEKMLEVRKLEEAMNLLRLMKKHKYPPYHDPFVPYISKFG 558

Query: 1312 TADDAFSLIK--KARKNGMPGRLCINLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDIWSI 1485
            T ++A   +K    +KN  P     ++ ++F+  G+ SE   L+ + P +I K  DI  +
Sbjct: 559  TVEEAAEFLKALSVKKNPSPSAY-FHIFESFFREGRHSEAKDLLFKCPHHIRKHRDIAKL 617

Query: 1486 TKGTSS 1503
               T S
Sbjct: 618  FGSTQS 623



 Score = 77.8 bits (190), Expect = 2e-11
 Identities = 77/351 (21%), Positives = 143/351 (40%), Gaps = 8/351 (2%)
 Frame = +1

Query: 244  NQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
            N V  +++ N WS E E  L D +   + + V+  L  L  NP KA   F W +    ++
Sbjct: 66   NSVVELVLANEWSTELENELDDSNLGWTHERVIYVLKKLDKNPQKASVFFNWVSQKDGFR 125

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKL 600
            P+S LY+ ++R++  ++ +  FW  + +M+E  F ++  +F +++ +  + K   D+  L
Sbjct: 126  PSSLLYSLMLRILVLKD-MKRFWATLAKMKEQSFYIDEETFDSILAQLVKEKMTNDVVAL 184

Query: 601  FLW---LFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRY 771
              +   + ED   +  V K   V+ G           + K + D        V  GL  Y
Sbjct: 185  RHFNDRMIEDNAMDSVVKKVVDVVLG-LQWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTY 243

Query: 772  LTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMN 951
             +K              +   P +  +  TY      L   D + E   +I EM+  G +
Sbjct: 244  PSKASSFFR-------WVGRYPGYEHNSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYD 296

Query: 952  LEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVS----HTVITSLACYLCDKNRGMD 1119
            L+   +  I     K+   +++V + E M++     S    + ++ S++      N    
Sbjct: 297  LDIDNYIKISRQFQKSKMMEDSVKLYEFMMDGPFKPSAQDCNLLLRSIS---AGDNPDCS 353

Query: 1120 AYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTP 1272
                + K  E      +   Y  +   LT +G   EA  M+ +M+  GY P
Sbjct: 354  LAFRVAKKYESTGRTLSKAAYDGIHRSLTSAGRFDEAEKMMKVMRNAGYEP 404


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
            gi|557542189|gb|ESR53167.1| hypothetical protein
            CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  203 bits (517), Expect = 2e-49
 Identities = 130/450 (28%), Positives = 229/450 (50%), Gaps = 5/450 (1%)
 Frame = +1

Query: 214  EAANTKVEETNQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLF 390
            E A   V +T  +  +++ + W  +  ++L D+   +S++ VL  L  L   P KA   F
Sbjct: 196  EIAMDNVAKT--LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253

Query: 391  KWYTTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYR 570
            +W   +  YK  +  YN ++RV+ +   +  FWN+VEEM++ G+ M+  ++  +  +F +
Sbjct: 254  RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313

Query: 571  YKRPEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFL---KDGGQAKK 741
            ++  ED  KLF ++  DG  + SV  C  +L           G+V +     +  G +  
Sbjct: 314  FRIMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372

Query: 742  KMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQV 921
            K VY+G+HR LTK GR +EAEK+M+ M   G  F PD+ TY  +++GLC A R E+A  V
Sbjct: 373  KSVYDGIHRALTKLGRFDEAEKMMKAMKNAG--FEPDNITYSQVIFGLCKAGRFEDACNV 430

Query: 922  IHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCD 1101
            + EM   G   + K W  +I     AN+ D A+    +M+E   +    ++  L      
Sbjct: 431  LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490

Query: 1102 KNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVD 1281
            + R   AY L+ + IE + ++P    +  ++  L  +  ++EA+N+L LMK   Y P  +
Sbjct: 491  QKRVNGAYKLLVEMIEKVHLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550

Query: 1282 SLCEPIAKFGTADDAFSLIKKARKNGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYI 1458
               + I+KFGTA+DA   +K       P     + + ++F++ G+  E   L+ + P +I
Sbjct: 551  PFVQYISKFGTAEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHI 610

Query: 1459 AKTPDIWSITKGTSSGKRESEVSTKKGDTS 1548
             +   I S+  G++   + + + ++K  TS
Sbjct: 611  RQDSKI-SLLFGSAKSNKVT-IPSRKESTS 638



 Score = 75.9 bits (185), Expect = 7e-11
 Identities = 92/425 (21%), Positives = 169/425 (39%), Gaps = 36/425 (8%)
 Frame = +1

Query: 106  RASNFLGFARRSTHYQDHNTR-HIKPLYQIFQPRNFSEAANTKVEETNQVCSILVNNPWS 282
            R ++F   +  +   Q H ++ HI    +IF    FS + N+ +E       +++   WS
Sbjct: 31   RVTHFFHISSFTASNQSHTSQFHINTCQKIF----FSTSPNSSLE-------LILACDWS 79

Query: 283  VETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYKPTSSLYNTVMRVV 459
             E E +L +LS  ++ + V+  L  L  +P KA   F W      ++P+S++Y+ ++R +
Sbjct: 80   DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139

Query: 460  CQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLFLW---------- 609
              ++ L  FW  +  M+E+   +E  ++ +++    + K+  D+A L  +          
Sbjct: 140  VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199

Query: 610  ----------------------LFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKD 723
                                    ED K E S      VL           G  +   + 
Sbjct: 200  DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259

Query: 724  GGQAKKKMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRL 903
             G     + YNG+ R L +   + +   V+E M KEG  +  D  TY  +         +
Sbjct: 260  SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG--YEMDIDTYIKISRQFQKFRIM 317

Query: 904  EEARQVIHEMRNKGMNLEPKMWKFIIDSLDKANKTD-EAVAMCEEMIESREN-VSHTVIT 1077
            E+A ++   M +       +    ++ S+   N  D   V       ES  N +S +V  
Sbjct: 318  EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377

Query: 1078 SLACYLCDKNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKG 1257
             +   L    R  D    M K ++    +P    Y +V+  L  +G  ++A N+L  M+ 
Sbjct: 378  GIHRALTKLGR-FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436

Query: 1258 HGYTP 1272
            +G  P
Sbjct: 437  NGCIP 441


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  202 bits (515), Expect = 4e-49
 Identities = 135/443 (30%), Positives = 222/443 (50%), Gaps = 5/443 (1%)
 Frame = +1

Query: 223  NTKVEETNQVCSILVNNPWSVETEERLSDL-STISEDEVLVALNTLIGNPSKARRLFKWY 399
            N   E   +V  ++  + WS E E++L +L ++ S++ VL  L  L G P KA R F+W 
Sbjct: 196  NAMDEVVKKVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALRFFQWV 255

Query: 400  TTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKR 579
                 Y+ +S  YN + RV+ +++ +  FW++VEEM+  G  M+  ++  +  +F + K 
Sbjct: 256  GECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKM 315

Query: 580  PEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKDG---GQAKKKMV 750
             ED  KL+  +  DG  + SV  C  +L            +V +  +     G +  K V
Sbjct: 316  LEDAVKLYE-IMMDGPYKPSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAV 374

Query: 751  YNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHE 930
            Y+G+HR LT  GR +EA K+ME M   G    PD+ TY  LVYGLC A +LEEA +++ E
Sbjct: 375  YDGIHRSLTSVGRFDEAGKIMESMRSAG--CEPDNITYSQLVYGLCKARKLEEACKLLDE 432

Query: 931  MRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNR 1110
            M   G   + K W  +I     A + D+A+    +M+E   +    ++  L      + R
Sbjct: 433  MEACGCVPDIKTWTILIQGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKR 492

Query: 1111 GMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLC 1290
               AY L+ + +    + P    Y  ++N L     ++EA+N+L LMK   Y P  +   
Sbjct: 493  IDGAYKLLVEMVNTAHLVPWQATYKLMINKLLGVRKLEEAINLLHLMKKQNYPPFPEPFI 552

Query: 1291 EPIAKFGTADDAFSLIKKARKNGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYIAKT 1467
            E I+KFGT +DA   +        P +   +++ ++F+  G++SE   L+ + P +I K 
Sbjct: 553  EYISKFGTVEDAGEFLNALSAKKYPSQSAYVHVFESFFQEGRESEAKDLLYKCPHHIRKH 612

Query: 1468 PDIWSITKGTSSGKRESEVSTKK 1536
            PDI  +      G  +SE +T+K
Sbjct: 613  PDICKL-----FGSAKSEYATEK 630



 Score = 71.2 bits (173), Expect = 2e-09
 Identities = 78/364 (21%), Positives = 152/364 (41%), Gaps = 14/364 (3%)
 Frame = +1

Query: 244  NQVCSILVNNPWSVETEERLSDLSTI-SEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
            N +  +++ N WS E E  L   S++ + + V+  L  L  +P +    F W T  + ++
Sbjct: 66   NSIVELVLENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWVTEKNGFR 125

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKL 600
            P+S++Y+ ++R +     +  FW  + +M+E GF ++  ++  ++  F + K   +   L
Sbjct: 126  PSSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKKGKMASEEVAL 185

Query: 601  FLW----LFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYN-GLH 765
              +    + E+  DE  V K  ++++ +       S  V+K L   G+ K     N  LH
Sbjct: 186  THFYNRMVQENAMDEV-VKKVVELVTMSVW-----SSEVEKKL---GELKNSFSDNFVLH 236

Query: 766  RYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKG 945
                  G   +A +  +  + E P +     TY  +   L   D + E   ++ EM++KG
Sbjct: 237  VLRELRGYPLKALRFFQ-WVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKG 295

Query: 946  MNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYL-CDKNRGMDA 1122
              ++   +  I     K    ++AV + E M++     S    T L   +    N  +  
Sbjct: 296  HEMDIDTYIKISRQFQKNKMLEDAVKLYEIMMDGPYKPSVQDCTMLLRSISLSSNPDLAL 355

Query: 1123 YNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHG-------YTPIVD 1281
               + +  E +        Y  +   LT  G   EA  ++  M+  G       Y+ +V 
Sbjct: 356  VFRVTEKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVY 415

Query: 1282 SLCE 1293
             LC+
Sbjct: 416  GLCK 419


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  202 bits (514), Expect = 5e-49
 Identities = 128/450 (28%), Positives = 228/450 (50%), Gaps = 5/450 (1%)
 Frame = +1

Query: 214  EAANTKVEETNQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLF 390
            E A   V +T  +  +++ + W  +  ++L D+   +S++ VL  L  L   P KA   F
Sbjct: 196  EIAMDNVAKT--LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253

Query: 391  KWYTTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYR 570
            +W   +  YK  +  YN ++RV+ +   +  FWN+VEEM++ G+ M+  ++  +  +F +
Sbjct: 254  RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313

Query: 571  YKRPEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFL---KDGGQAKK 741
            ++  ED  KLF ++  DG  + SV  C  +L           G+V +     +  G +  
Sbjct: 314  FRMMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372

Query: 742  KMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQV 921
            K VY+G+HR LTK GR +EAEK+M+ M   G  F PD+ TY  +++GLC A   E+A  V
Sbjct: 373  KSVYDGIHRALTKLGRFDEAEKIMKAMKNAG--FEPDNITYSQVIFGLCKAGSFEDACNV 430

Query: 922  IHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCD 1101
            + EM   G   + K W  +I     AN+ D A+    +M+E   +    ++  L      
Sbjct: 431  LDEMEENGCIPDIKSWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490

Query: 1102 KNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVD 1281
            + R   AY L+ + IE ++++P    +  ++  L  +  ++EA+N+L LMK   Y P  +
Sbjct: 491  QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550

Query: 1282 SLCEPIAKFGTADDAFSLIKKARKNGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYI 1458
               + I+KFGT +DA   +K       P     + + ++F++ G+  E   L+ + P +I
Sbjct: 551  PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHI 610

Query: 1459 AKTPDIWSITKGTSSGKRESEVSTKKGDTS 1548
             +   I S+  G++   + + + ++K  TS
Sbjct: 611  RQDSKI-SLLFGSAKSNKVT-IPSRKESTS 638



 Score = 77.0 bits (188), Expect = 3e-11
 Identities = 93/429 (21%), Positives = 173/429 (40%), Gaps = 36/429 (8%)
 Frame = +1

Query: 106  RASNFLGFARRSTHYQDHNTR-HIKPLYQIFQPRNFSEAANTKVEETNQVCSILVNNPWS 282
            R ++F   +  +   Q H ++ HI    +IF    FS + N+ +E       +++   WS
Sbjct: 31   RVTHFFHLSSFTASNQSHTSQFHINTCQKIF----FSTSPNSSLE-------LILACDWS 79

Query: 283  VETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYKPTSSLYNTVMRVV 459
             E E +L +LS  ++ + V+  L  L  +P KA   F W      ++P+S++Y+ ++R +
Sbjct: 80   DELENKLEELSPKLTHESVVYVLRKLDKDPQKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139

Query: 460  CQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLFLW---------- 609
              ++ L  FW  +  M+E+   +E  ++ +++    + K+  D+A L  +          
Sbjct: 140  VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199

Query: 610  ----------------------LFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKD 723
                                    ED K E S      VL           G  +   + 
Sbjct: 200  DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259

Query: 724  GGQAKKKMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRL 903
             G     + YNG+ R L +   + +   V+E M KEG  +  D  TY  +         +
Sbjct: 260  SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG--YEMDIDTYIKISRQFQKFRMM 317

Query: 904  EEARQVIHEMRNKGMNLEPKMWKFIIDSLDKANKTD-EAVAMCEEMIESREN-VSHTVIT 1077
            E+A ++   M +       +    ++ S+   N  D   V       ES  N +S +V  
Sbjct: 318  EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377

Query: 1078 SLACYLCDKNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKG 1257
             +   L    R  +A  +M K ++    +P    Y +V+  L  +G  ++A N+L  M+ 
Sbjct: 378  GIHRALTKLGRFDEAEKIM-KAMKNAGFEPDNITYSQVIFGLCKAGSFEDACNVLDEMEE 436

Query: 1258 HGYTPIVDS 1284
            +G  P + S
Sbjct: 437  NGCIPDIKS 445


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  200 bits (508), Expect = 2e-48
 Identities = 130/451 (28%), Positives = 223/451 (49%), Gaps = 8/451 (1%)
 Frame = +1

Query: 223  NTKVEETNQVCSILVNNPWSVETEERLSDLS-TISEDEVLVALNTL--IGNPSKARRLFK 393
            N   +    V  ++    W VE E +L ++  ++S++ VL  L  L  +GNP KA   FK
Sbjct: 196  NAMGDVAKDVSELITKQEWGVEVERQLGEMKLSVSDNFVLRVLKELREVGNPLKAFSFFK 255

Query: 394  WYTTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRY 573
            W      ++ ++  YN ++RV+C+E  +  FW +V+EM   GF ++  ++  +   F + 
Sbjct: 256  WVARNLDFQHSTVTYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKI 315

Query: 574  KRPEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSG----VVQKFLKDGGQAKK 741
            K  +D  +L+  L  DG+ + S+ +C  +L                VV+KF +  G ++ 
Sbjct: 316  KMLKDAVELYE-LMMDGQFKPSLGECNILLRSIAQSYSSDLDLLFRVVEKF-EAAGHSRS 373

Query: 742  KMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQV 921
            K++Y+ +HR LT  GR EEAEK+ E M   G  F PD+ TY  L+YGLC   RLEEA +V
Sbjct: 374  KIIYDVIHRCLTNLGRFEEAEKITEAMRDAG--FEPDNITYSQLIYGLCKVRRLEEASKV 431

Query: 922  IHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCD 1101
            I  M   G   + K W  +I     A + D+A+    +M+E   +    ++  L      
Sbjct: 432  IDVMEECGCIPDIKTWTVLIQGHCFAGEVDKALFCFAKMMEKNVDTDADLLDVLLNGFLS 491

Query: 1102 KNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVD 1281
            + R   AY L+ + +   +M+P    Y  V+  L      +EAL++L  MK H Y P  +
Sbjct: 492  QRRVFGAYQLLTELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLRRMKKHNYPPFPE 551

Query: 1282 SLCEPIAKFGTADDAFSLIKKARKNGMPGRLCI-NLVKAFYDAGKQSEGDSLVGRLPDYI 1458
               + I+K GT +DA   +K       P      ++ ++F+  G+ SE   L+ + P +I
Sbjct: 552  PFLQYISKSGTVEDAVEFLKALSVKDYPSVSAYQHVFQSFFAEGRHSEAKDLLYKCPYHI 611

Query: 1459 AKTPDIWSITKGTSSGKRESEVSTKKGDTSI 1551
             + P I  +   ++S   +++  +++  TS+
Sbjct: 612  RQHPAICGLFGSSNSNSGKAKRFSRQSSTSV 642



 Score = 75.9 bits (185), Expect = 7e-11
 Identities = 93/413 (22%), Positives = 167/413 (40%), Gaps = 18/413 (4%)
 Frame = +1

Query: 88   RILNPKRASNFLGFAR--RSTHYQDHNTRHI----KPLYQIFQPRNFSEAANTKV--EET 243
            RIL+  R  N L F +  R+T      T+H+      L QI+   +   ++       +T
Sbjct: 6    RILSSLRLRNSLFFTQLSRATSSNHQVTQHLYLSPSLLTQIYTSTSILGSSQNVFFSSKT 65

Query: 244  NQVCSILVNNPWSVETEERLSDLS-TISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
                 I+++N WS + E+ L      ++ + V+  L  L   P KA    KW      +K
Sbjct: 66   ESFVDIILSNDWSKQLEKDLGKNDFPVTHEAVMYLLKKLDKEPRKAGDFLKWVVKQKGFK 125

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKL 600
            P+SS+Y+ ++R+    + +  FW  ++EM+ENGF ++  ++ ++   F   K   D   L
Sbjct: 126  PSSSMYSLMLRIYANRDSMKDFWTTIKEMKENGFYIDEETYKSIYSIFRNLKMETDATAL 185

Query: 601  FLWLFEDGKDEF--SVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRYL 774
              +     KD     V K    L             V++ L   G+ K  +  N + R L
Sbjct: 186  KHFYGRMIKDNAMGDVAKDVSELITKQEWGVE----VERQL---GEMKLSVSDNFVLRVL 238

Query: 775  TKDGRLEEAEKVMEVM--IKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGM 948
             +   +    K       +     F     TY  ++  LC  + +EE   V+ EM + G 
Sbjct: 239  KELREVGNPLKAFSFFKWVARNLDFQHSTVTYNGILRVLCREESIEEFWGVVKEMMSLGF 298

Query: 949  NLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVS----HTVITSLA-CYLCDKNRG 1113
             ++   +  I     K     +AV + E M++ +   S    + ++ S+A  Y  D    
Sbjct: 299  EIDLDTYIKISRHFQKIKMLKDAVELYELMMDGQFKPSLGECNILLRSIAQSYSSD---- 354

Query: 1114 MDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTP 1272
            +D    + +  E      +   Y  +   LT+ G  +EA  +   M+  G+ P
Sbjct: 355  LDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEP 407


>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 642

 Score =  198 bits (503), Expect = 9e-48
 Identities = 133/453 (29%), Positives = 222/453 (49%), Gaps = 10/453 (2%)
 Frame = +1

Query: 223  NTKVEETNQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTL--IGNPSKARRLFK 393
            N   +    V  ++  + W VE E +L ++   +S++ VL  L  L  IG P KA   FK
Sbjct: 196  NAMGDVAKDVSELITKHEWGVEVERQLGEMKLPVSDNFVLRVLKELREIGYPLKAFSFFK 255

Query: 394  WYTTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRY 573
            W      ++ T+  YN ++RV+C+E  +  FW +V+EM   GF ++  ++  +   F + 
Sbjct: 256  WVARNLDFQHTTITYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKI 315

Query: 574  KRPEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSG------VVQKFLKDGGQA 735
            K  +D  +L+  L  DG+ + S+ +C  +L         PS       VV+KF +  G +
Sbjct: 316  KMLKDAVELYE-LMMDGQFKPSLGECNILLRS--IAQSHPSDLDLLFRVVEKF-EAAGHS 371

Query: 736  KKKMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEAR 915
            + K++Y+ +HR LT  GR EEAEK+ E M   G  F PD+ TY  L+YGLC   RLEEA 
Sbjct: 372  RSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAG--FEPDNITYSQLIYGLCKVRRLEEAS 429

Query: 916  QVIHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYL 1095
            +VI  M   G   + K W  +I     A + D+A+    +M+E   +    ++  L    
Sbjct: 430  KVIDVMEECGCIPDIKTWTVLIQGHCFAGEVDKALFCFAKMMERNVDTDADLLDVLLNGF 489

Query: 1096 CDKNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPI 1275
              + R   AY L+ + +   +M+P    Y  V+  L      +EAL++L  MK H Y P 
Sbjct: 490  LSQRRVFGAYQLLTELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLRRMKKHNYPPF 549

Query: 1276 VDSLCEPIAKFGTADDAFSLIKKARKNGMPGRLCI-NLVKAFYDAGKQSEGDSLVGRLPD 1452
             +   + I+K GT +DA   +K       P      ++ ++F+  G+ SE   L+ + P 
Sbjct: 550  PEPFLQYISKSGTVEDAVEFLKALSVKDYPSVSAYQHVFQSFFAEGRHSEAKDLLYKCPH 609

Query: 1453 YIAKTPDIWSITKGTSSGKRESEVSTKKGDTSI 1551
            +I + P I  +   ++S   + +   ++  TS+
Sbjct: 610  HIRQHPAICGLFGSSNSNSGKVKRFPRQSSTSV 642



 Score = 74.3 bits (181), Expect = 2e-10
 Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 14/335 (4%)
 Frame = +1

Query: 88   RILNPKRASNFLGFARRS----THYQDHNTRHIKP--LYQIFQPRNFSEAANTKV--EET 243
            RIL+  R  N L F + S    +++Q     ++ P  L QI+   +   A+       +T
Sbjct: 6    RILSSLRLRNSLFFTQLSRAPSSNHQVTQHLNLSPSLLTQIYTSTSILGASQNVFFSSKT 65

Query: 244  NQVCSILVNNPWSVETEERL--SDLSTISEDEVLVALNTLIGNPSKARRLFKWYTTYHSY 417
                 I+++N WS + E+ L  +DL  ++ + V+  L  L   P KA    KW    + +
Sbjct: 66   ESFVDIILSNDWSKQLEKDLGKNDLP-VTHEAVMYLLKKLDKEPQKAGDFLKWVVKQNGF 124

Query: 418  KPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAK 597
            KP+SS+Y+ ++R+    + +  FW  ++EM+ENGF ++  ++ ++   F   K   D   
Sbjct: 125  KPSSSMYSLMLRIYANRDSMKDFWTTIKEMKENGFYIDEETYKSIHSIFRNLKMETDATA 184

Query: 598  LFLWLFEDGKDEF--SVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRY 771
            L  +     KD     V K    L             V++ L   G+ K  +  N + R 
Sbjct: 185  LKHFYGRMIKDNAMGDVAKDVSELITKHEWGVE----VERQL---GEMKLPVSDNFVLRV 237

Query: 772  LTKDGRLEEAEKVMEVMIKEGPIFGPDHT--TYGYLVYGLCNADRLEEARQVIHEMRNKG 945
            L +   +    K               HT  TY  ++  LC  + +EE   V+ EM + G
Sbjct: 238  LKELREIGYPLKAFSFFKWVARNLDFQHTTITYNGILRVLCREESIEEFWGVVKEMMSLG 297

Query: 946  MNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESR 1050
              ++   +  I     K     +AV + E M++ +
Sbjct: 298  FEIDLDTYIKISRHFQKIKMLKDAVELYELMMDGQ 332


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
            gi|548855973|gb|ERN13836.1| hypothetical protein
            AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score =  195 bits (495), Expect = 8e-47
 Identities = 127/418 (30%), Positives = 217/418 (51%), Gaps = 7/418 (1%)
 Frame = +1

Query: 244  NQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
            N+   +LV++ W+ E + +LS L   +S+  +L  L  +  +P KA   ++W     +++
Sbjct: 145  NEAIKLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPLKALDFYRWVGGQPNFR 204

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKL 600
             ++  YN+++RV+ + + +  FW +V+EM+E+GF M+  S+  L  RF ++   ++  +L
Sbjct: 205  HSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKLSRRFQKWNMLKEAVEL 264

Query: 601  FLWLFEDGKDEFSVVKCCQVL-----SGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLH 765
            + ++ E G  + SV  C  +L     SGN         VV+KF +  G +  K +Y+G+H
Sbjct: 265  YEFMSE-GPYQPSVQHCGLLLRKLATSGNPGPDLV-FRVVKKF-EGAGNSLTKSIYDGIH 321

Query: 766  RYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKG 945
            R LT  GR +EA+ ++E M K G  F PD+ TY  L++GLC A R +EA + + EM   G
Sbjct: 322  RSLTSMGRFDEAQNILEAMEKAG--FIPDNITYSQLIFGLCKAHRFDEACKFLDEMEALG 379

Query: 946  MNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNRGMDAY 1125
               + K W  +I     A +  EA++  ++M+         ++  L    C++NR  DAY
Sbjct: 380  CTPDLKTWTILIQGHCLAGEVKEALSCFKKMLGKGVEADADLLEVLVAGFCNQNRPEDAY 439

Query: 1126 NLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPIAK 1305
             L+   +    +KP    Y  ++  L    M++EAL +L LMK       VD     I+K
Sbjct: 440  TLLSVMMTKTHLKPWQATYKILIEGLLGRRMLEEALKLLLLMKKQKLPAFVDPFIGYISK 499

Query: 1306 FGTADDAFSLIKKARKNGMP-GRLCINLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDI 1476
             G A+DA  L+K       P   + +N+ +AF   G+ ++   L+ R P +I K  DI
Sbjct: 500  NGMAEDAMDLLKTLTLGQNPSSAVYVNIFEAFMKEGRFTDAQDLLHRFPHHIRKHADI 557


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  192 bits (489), Expect = 4e-46
 Identities = 129/435 (29%), Positives = 209/435 (48%), Gaps = 5/435 (1%)
 Frame = +1

Query: 223  NTKVEETNQVCSILVNNPWSVETEERLSDLS-TISEDEVLVALNTLIGNPSKARRLFKWY 399
            N   E   +V  ++  + WS   E+ L +L  T+S++ V+  L  L   PSKA   F W 
Sbjct: 213  NATDEVAKKVADVVSGSEWSAGIEKELGELKITLSDNFVVRVLKELRICPSKALSFFHWV 272

Query: 400  TTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKR 579
                 Y+  +  YN V R++ Q + +  FW+++EEM+  G  ++  ++  +  +F + K 
Sbjct: 273  GQSSGYEHNTITYNAVARILAQADSIGEFWSVIEEMKGAGHELDLDTYIKITRQFQKSKM 332

Query: 580  PEDMAKLFLWLFEDGKDEFSVVKCCQVL---SGNXXXXXXPSGVVQKFLKDGGQAKKKMV 750
             ED  KL+  L  DG  + S   C  +L   S N          V K  +  G    K V
Sbjct: 333  MEDAVKLY-ELMMDGPYKPSAQDCSMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAV 391

Query: 751  YNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHE 930
            Y+G+HR LT  G  +EAEK+ +VM   G  + PD+ TY  LV+GLC A RLEEA +V+ E
Sbjct: 392  YDGIHRSLTSAGSFDEAEKITKVMRNAG--YEPDNITYSQLVFGLCKAKRLEEACKVLDE 449

Query: 931  MRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNR 1110
            M   G   +   W  +I     AN+ D A+    +MIE   +    ++  L      + +
Sbjct: 450  MEANGCVPDIMTWTILIQGHCAANEVDTALVCFAKMIEKGCDADADLLDVLINGFLKQRK 509

Query: 1111 GMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLC 1290
               AY L+ + +   +++P    Y  ++ +L     + EA  +L LMK   Y P  D   
Sbjct: 510  IEGAYKLLIEMVNMTRLRPWQATYKNLIENLLGVRKLDEAFALLHLMKKQSYPPYPDPFV 569

Query: 1291 EPIAKFGTADDAFSLIKKARKNGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYIAKT 1467
            + ++KFG+ +DA    K       P     +++ K+F+  G+ SE   L+ + P +I K 
Sbjct: 570  QYLSKFGSVEDAAEFFKALSVKEYPSSAAYVHVFKSFFKEGRDSEAKELLYKCPYHIRKL 629

Query: 1468 PDIWSITKGTSSGKR 1512
             +I S   G++ GK+
Sbjct: 630  GEI-SKLFGSTEGKQ 643



 Score = 93.6 bits (231), Expect = 3e-16
 Identities = 92/382 (24%), Positives = 165/382 (43%), Gaps = 10/382 (2%)
 Frame = +1

Query: 244  NQVCSILVNNPWSVETEERLSD-LSTISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
            N V  +++ N WS E E  LS+   +++ D V+  L  L  +P KA   F W    + +K
Sbjct: 83   NSVLQLVLANQWSAELENELSESYPSLTHDAVIYVLKKLDKDPKKAWDFFNWVCEKNGFK 142

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMA-- 594
            P+S ++N ++ V+  ++ +  FW  + +M+E GF +E  ++S +  R  + K   D+   
Sbjct: 143  PSSLVFNLMLGVLGHKDSMKQFWITLRQMKEQGFYIEVQTYSAIAERLKKGKMDNDVVAF 202

Query: 595  -KLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRY 771
               F  + +D   +    K   V+SG+       S  ++K L   G+ K  +  N + R 
Sbjct: 203  KHFFERMMKDNATDEVAKKVADVVSGSEW-----SAGIEKEL---GELKITLSDNFVVRV 254

Query: 772  LTKDGRLEEAEKVMEVMIKEGPIFGPDHT--TYGYLVYGLCNADRLEEARQVIHEMRNKG 945
            L K+ R+  + K +      G   G +H   TY  +   L  AD + E   VI EM+  G
Sbjct: 255  L-KELRICPS-KALSFFHWVGQSSGYEHNTITYNAVARILAQADSIGEFWSVIEEMKGAG 312

Query: 946  MNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNR-GMDA 1122
              L+   +  I     K+   ++AV + E M++     S    + L   +   ++  +D 
Sbjct: 313  HELDLDTYIKITRQFQKSKMMEDAVKLYELMMDGPYKPSAQDCSMLLRSISANDKPDLDM 372

Query: 1123 YNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTP---IVDSLCE 1293
               + K  E      +   Y  +   LT +G   EA  +  +M+  GY P       L  
Sbjct: 373  VFRVAKKFESAGNTLSKAVYDGIHRSLTSAGSFDEAEKITKVMRNAGYEPDNITYSQLVF 432

Query: 1294 PIAKFGTADDAFSLIKKARKNG 1359
             + K    ++A  ++ +   NG
Sbjct: 433  GLCKAKRLEEACKVLDEMEANG 454


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  192 bits (488), Expect = 5e-46
 Identities = 125/415 (30%), Positives = 205/415 (49%), Gaps = 6/415 (1%)
 Frame = +1

Query: 250  VCSILVNNPWSVETEERLSDLSTISEDEVLV-ALNTLIGNPSKARRLFKWYTTYHSYKPT 426
            V S++    WS E E+ L  +  +  D  ++  L  L   P KA + F W      Y+  
Sbjct: 203  VVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYECN 262

Query: 427  SSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLFL 606
            +  YN + RV+ +++ +  FW++VEEM+  G  M+  ++  +  +F + K   D  KL+ 
Sbjct: 263  TITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYE 322

Query: 607  WLFEDGKDEFSVVKCCQVL----SGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRYL 774
            ++  DG  + SV  C  +L    + N         VV K+ +  G +  K VY+G+HR L
Sbjct: 323  FMM-DGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKY-EATGNSLSKAVYDGIHRSL 380

Query: 775  TKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMNL 954
            T  G  +EA K+M+ M   G  + PD+ TY  LV+GLC A RLEEA +V+ EM   G   
Sbjct: 381  TSIGNFDEAAKMMKCMQTAG--YEPDNITYSQLVFGLCKARRLEEACEVLDEMEAHGCLP 438

Query: 955  EPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNRGMDAYNLM 1134
            + K W  +I     AN+  +A+    +M+E   +    ++  L      + R   AY L 
Sbjct: 439  DIKTWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLF 498

Query: 1135 CKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPIAKFGT 1314
               ++  +++P    Y  ++  L     ++EALN+L LMK H + P  +   + I++FGT
Sbjct: 499  MDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPPFPEPFVQYISRFGT 558

Query: 1315 ADDAFSLIKKARKNGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDI 1476
             DDA   +K       P     +N+ ++F+ AG+ SE   L+ + P +I K P I
Sbjct: 559  VDDAADFLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHPKI 613



 Score = 68.9 bits (167), Expect = 8e-09
 Identities = 98/417 (23%), Positives = 168/417 (40%), Gaps = 23/417 (5%)
 Frame = +1

Query: 91   ILNPKRASNFLGFARRSTHYQD-HNTRHIKPLYQIFQPRNFSEAANTKVE-----ETNQV 252
            IL   R SNFL   R ST         H  P +   +    S+  N   +     + + +
Sbjct: 7    ILVSLRLSNFLLSTRISTTRPFLTQVTHFFPCFLSREHSYTSDYVNIHKKLYSSSKPSSL 66

Query: 253  CSILVNNPWSVETEERLSDLSTI-SEDEVLVALNTLIGNPSKARRLFKWYTTYHSYKPTS 429
              +L  N WS E E +L + S + + + V+  L  L  +P KA   F W    + +KP+S
Sbjct: 67   VELLSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKAWDFFNWVCDRNGFKPSS 126

Query: 430  SLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLFLW 609
             LY+ ++R++ +++ + +FW  + +M+E GF  +  ++   IL  +R +R +  A  F  
Sbjct: 127  PLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLT-ILGVFRKERMDSDAVAFKH 185

Query: 610  LFEDGKDE---FSVVK-CCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRYLT 777
             F+   +E    SVVK    V+S         S  V+K L+            G+   LT
Sbjct: 186  FFDRMVEENAMDSVVKNVVSVVSATEW-----SNEVEKELE------------GMGILLT 228

Query: 778  KDGRLEEAEKVMEVMIKEGPIFG---------PDHTTYGYLVYGLCNADRLEEARQVIHE 930
             +  +   +++    +K    F           +  TY  +   L   D + E   V+ E
Sbjct: 229  DNFVIRVLKELRNYPLKALQFFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEE 288

Query: 931  MRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNR 1110
            M+N G  ++   +  I     K     +AV + E M++     S    + L   +   N 
Sbjct: 289  MKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASN- 347

Query: 1111 GMDAYNLMCKGI---EGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTP 1272
                 NL+ + +   E      +   Y  +   LT  G   EA  M+  M+  GY P
Sbjct: 348  -YPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCMQTAGYEP 403


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score =  189 bits (480), Expect = 4e-45
 Identities = 119/429 (27%), Positives = 210/429 (48%), Gaps = 8/429 (1%)
 Frame = +1

Query: 223  NTKVEETNQVCSILVNNP-WSVETEERLSDLS-TISEDEVLVALNTLIGNPS--KARRLF 390
            N   +E  +V  ++     W  + E +L +++  +S++ VL  L  L G     KA R F
Sbjct: 197  NAMDDEVKEVVDVVGGGDHWGEKVEAKLREMNIAVSDNLVLRILKQLRGQGCAVKAYRFF 256

Query: 391  KWYTTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYR 570
            KW  +   ++ T+  YN V+R++C+E  +  FWN+  EM   GF ++  ++  +   F +
Sbjct: 257  KWIESSSDFEHTTVTYNGVLRILCREESIDEFWNVFSEMNAAGFRLDIDTYVKVSRSFQK 316

Query: 571  YKRPEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKD---GGQAKK 741
                ED  KL+  +  D   + SV +C  +L           G++ + ++    GG +  
Sbjct: 317  NAMFEDGVKLYEHMM-DSPYKPSVSECNYLLQALSRHGSPDLGLIDRVIEKFVAGGNSLS 375

Query: 742  KMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQV 921
            K +Y+G+HR LT+ G+ EEAE ++E M + G  F PD+ TY  LV+GLC  DR +EA  V
Sbjct: 376  KTLYDGIHRSLTRLGKFEEAEGIVEKMRENG--FEPDNVTYSQLVFGLCKFDRFDEAAGV 433

Query: 922  IHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCD 1101
            +  M   G   +   W  +I    K  +TD+A+     M+E   +    ++ ++   L  
Sbjct: 434  LESMEKWGCKPDIMTWTILIRGHFKGGETDKAMLHFARMMEKGFDPDADLLEAIVDELSK 493

Query: 1102 KNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVD 1281
            K+R  DA+ L+ +  E +K++P    +  ++  L      +EA+ +L +MK   Y P  +
Sbjct: 494  KSRAPDAFRLLVELAEKLKLRPWQSTFKNLIQQLLDGRRFEEAVRLLAMMKRQNYPPHCE 553

Query: 1282 SLCEPIAKFGTADDAFSLIKKARKNGMPGRLCI-NLVKAFYDAGKQSEGDSLVGRLPDYI 1458
               + ++KFG+ DDA   +        P      ++  AF +  + SE   L+ R P ++
Sbjct: 554  PFVDYVSKFGSVDDALEFLSSLTVKEYPSISSYRHVFGAFLNENRHSEAKDLLFRCPHHV 613

Query: 1459 AKTPDIWSI 1485
             K P + S+
Sbjct: 614  RKHPAVCSL 622



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 74/359 (20%), Positives = 146/359 (40%), Gaps = 12/359 (3%)
 Frame = +1

Query: 319  ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYKPTSSLYNTVMRV-VCQENHLYHFWNI 495
            ++ +  +  L  L  +P ++    KW    + ++P+ S+Y+ ++R+    +N L  FW  
Sbjct: 92   LTHESAVYVLKKLSKDPIRSSVFLKWAVEKNGFQPSCSVYSLMLRIYAANKNTLKDFWAT 151

Query: 496  VEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKL---FLWLFEDGKDEFSVVKCCQVLS 666
            ++EM+E G+ ++  +F+ L+  F   K   +   L   +  L ++   +  V +   V+ 
Sbjct: 152  IKEMKEKGYYIDEETFTTLLSLFRSSKMSNEATALRHFYSRLVQENAMDDEVKEVVDVVG 211

Query: 667  GNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFG 846
            G           V+  L++   A    +   + + L   G   +A +  +  I+    F 
Sbjct: 212  GGDHWGEK----VEAKLREMNIAVSDNLVLRILKQLRGQGCAVKAYRFFK-WIESSSDFE 266

Query: 847  PDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAM 1026
                TY  ++  LC  + ++E   V  EM   G  L+   +  +  S  K    ++ V +
Sbjct: 267  HTTVTYNGVLRILCREESIDEFWNVFSEMNAAGFRLDIDTYVKVSRSFQKNAMFEDGVKL 326

Query: 1027 CEEMIESRENVSHTVITSLACYLCDKNRGMDAYNLMCKGIE-----GIKMKPAYGPYMEV 1191
             E M++S    S +    L   L     G     L+ + IE     G  +      Y  +
Sbjct: 327  YEHMMDSPYKPSVSECNYLLQAL--SRHGSPDLGLIDRVIEKFVAGGNSLSKTL--YDGI 382

Query: 1192 VNHLTHSGMVKEALNMLGLMKGHGYTP---IVDSLCEPIAKFGTADDAFSLIKKARKNG 1359
               LT  G  +EA  ++  M+ +G+ P       L   + KF   D+A  +++   K G
Sbjct: 383  HRSLTRLGKFEEAEGIVEKMRENGFEPDNVTYSQLVFGLCKFDRFDEAAGVLESMEKWG 441


>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550322390|gb|EEF05766.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 486

 Score =  187 bits (476), Expect = 1e-44
 Identities = 117/435 (26%), Positives = 210/435 (48%), Gaps = 5/435 (1%)
 Frame = +1

Query: 223  NTKVEETNQVCSILVNNPWSVETEERLSDLSTISEDEVLV-ALNTLIGNPSKARRLFKWY 399
            N K      V  I++   W+ E E++L  +  +  D  ++  L  L   P KA R F+W 
Sbjct: 53   NAKDNVVKDVVRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWV 112

Query: 400  TTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKR 579
                 Y+  +  YN ++RV+ +++ +  FW++V+EM+  G+ M+  ++  +  +F + K 
Sbjct: 113  DRREGYQHNTVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKL 172

Query: 580  PEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFL---KDGGQAKKKMV 750
             ED  +L+ ++  DG  + SV  C  +L            +V + +   K  G +  K V
Sbjct: 173  MEDAVRLYEFMM-DGPFKPSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSV 231

Query: 751  YNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHE 930
            Y+G+HR  T  G+ +EAEK+++ M   G  + PD+ TY  LV+GLC + RLEEA +V+ E
Sbjct: 232  YDGMHRSFTSAGKFDEAEKIVKAMRDAG--YEPDNITYSQLVFGLCKSKRLEEACKVLDE 289

Query: 931  MRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNR 1110
            M   G   + K W  +I     AN+ D+ +    +M E   +    ++  L      + +
Sbjct: 290  MEAGGCIPDIKTWTILIQGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFLSQRK 349

Query: 1111 GMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLC 1290
               AY  + + +  +++ P    Y  ++  L     ++EA ++L LMK H Y P  +   
Sbjct: 350  MDGAYTFLVEMVNKLRLVPWQATYKLLIEKLLQVRKLEEATDLLRLMKKHNYPPFPEPFD 409

Query: 1291 EPIAKFGTADDAFSLIKKARKNGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYIAKT 1467
            + I+KFGT +DA +  K       P  +  + ++ +F   G+ SE   L+ + P +I K 
Sbjct: 410  QYISKFGTVEDAVNFFKVLSVKEYPSSVAYLRMLDSFLREGRDSEARDLLFKCPHHIRKD 469

Query: 1468 PDIWSITKGTSSGKR 1512
              I  +     +G +
Sbjct: 470  HKISKLFGSAKTGDK 484


>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cicer arietinum]
          Length = 635

 Score =  185 bits (469), Expect = 8e-44
 Identities = 119/412 (28%), Positives = 202/412 (49%), Gaps = 5/412 (1%)
 Frame = +1

Query: 244  NQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
            N+V  +++ + W  E    L++L   +S+  V   L  L   P KA + F W  +   Y+
Sbjct: 205  NKVVGVILGSEWGDEVMNELAELEIRLSDSFVTRVLKELQNCPLKAYKFFHWVGSQSVYE 264

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKL 600
              +  YN V RV+ +   +  FW+I+EEM+   + ++  +++ + ++  + +  E+  +L
Sbjct: 265  HNTVTYNAVARVLARPGSIKEFWSILEEMKSVRYQLDIDTYTTITMQLVKNQMIENAVEL 324

Query: 601  FLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGV---VQKFLKDGGQAKKKMVYNGLHRY 771
            +  L  DG  + S   CC +L+         S +   V K  +  G    K +Y+G+HR 
Sbjct: 325  YE-LMMDGSYKPSTHDCCVLLNAISTSDFPNSDLAFRVAKKYESVGHTLTKEIYDGIHRS 383

Query: 772  LTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMN 951
            LT  G+ +EAEK+++ M   G  F PD  TY  +V+GLC   RLEEA +V+ +M   G  
Sbjct: 384  LTSAGKFDEAEKIVKTMSNAG--FEPDSVTYSQVVFGLCKMKRLEEAHKVLEDMECCGCI 441

Query: 952  LEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNRGMDAYNL 1131
             +   W  +I     AN+ D+A+    +MIE   N     I+ L      + +  DAY  
Sbjct: 442  PDSNTWSILIQGYCAANEVDKALHCLLKMIEKGCNADAGAISVLVDSWLSQEKIDDAYKF 501

Query: 1132 MCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPIAKFG 1311
            + + +      P    Y +V+ +L   G ++EAL +L LM  H YTP    + + I+K G
Sbjct: 502  LAEMVRNCDASPRQPTYEKVIENLLGIGKLEEALVLLCLMWKHKYTPFTKPIVQFISKSG 561

Query: 1312 TADDAFSLIKKARK-NGMPGRLCINLVKAFYDAGKQSEGDSLVGRLPDYIAK 1464
            T +DA   +K  RK N +     +++ ++F   GK SE   L+ + P  I +
Sbjct: 562  TVEDAEKFLKAWRKGNPVSHSAYLHVFESFIREGKLSEAKDLLSKCPSRIRR 613


>gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
            [Theobroma cacao]
          Length = 660

 Score =  183 bits (465), Expect = 2e-43
 Identities = 122/431 (28%), Positives = 213/431 (49%), Gaps = 9/431 (2%)
 Frame = +1

Query: 244  NQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
            ++VC I+ +N W  + EERL DL+   S D V + L  L   P+KA  LF+W       K
Sbjct: 227  SRVCKIVRSNVWGDDVEERLRDLNVAFSSDLVKMVLENLGTEPTKAFILFRWAEECGLLK 286

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKL 600
                 YN + RV+ +E+ +  FW +V+EM+  G+ ME  ++  ++ RF + K  ++   L
Sbjct: 287  HDEQSYNAIARVLGREDCIDRFWKVVDEMKSIGYEMEMETYVKVLGRFCKRKMIKEAVDL 346

Query: 601  FLWLFEDGKDEFSVVKCC-----QVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLH 765
            +   F+        V CC     +++          S VV+ F + G      MV + + 
Sbjct: 347  YE--FKMAGCNKPSVSCCTFLLRKIVVSKQLDMDLFSRVVRVFKESGNVLTDSMV-DAVL 403

Query: 766  RYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKG 945
            R LT  GRL E  KV++VM + G + G +      + + L +A + +E  + +  +    
Sbjct: 404  RSLTSVGRLGECNKVLKVMEEGGFVAGGN--LQSKIAFRLASAGKKDETAEFMDHVAASN 461

Query: 946  MNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHT--VITSLACYLCDKNRGMD 1119
             NL+ K W  +I+    A   + A A  + M+E +E VSH       L    C + R MD
Sbjct: 462  TNLDHKAWGSLIEGCCAAGDLETASAYFQNMVE-KEGVSHAGYAFEWLVNSYCSRKRAMD 520

Query: 1120 AYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPI 1299
            A  L+ K +   +++P +  Y E++  L   G  ++ L++LGLMK HG+ P VD   + +
Sbjct: 521  ACKLLHKYVSENQLRPWHTTYKELIRKLLAQGGFRDGLSLLGLMKDHGFPPFVDPFIDYV 580

Query: 1300 AKFGTADDAFSLIKKARKNGMPG-RLCINLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDI 1476
            +K G+++DA + +K       P   + + + +AF+ A +Q+E   L+ + P Y+    D+
Sbjct: 581  SKSGSSEDAIAFLKSMTSKRFPSLSVVLRVFEAFFKAARQNEAQDLLSKCPGYVRNHADV 640

Query: 1477 WSITKGTSSGK 1509
             ++    +SG+
Sbjct: 641  LNLFCSKNSGQ 651


>gb|ESW27479.1| hypothetical protein PHAVU_003G205400g [Phaseolus vulgaris]
          Length = 636

 Score =  180 bits (456), Expect = 3e-42
 Identities = 117/432 (27%), Positives = 211/432 (48%), Gaps = 4/432 (0%)
 Frame = +1

Query: 193  FQPRNFSEAANTKVEETNQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNP 369
            F  R+  E A   V     V  I+  + W    +  L+ ++  +S++ ++  L  L   P
Sbjct: 191  FYNRSIREDAMQSV--VANVVDIISVSKWGDGVKGELAKVNIQLSDNFIIRVLRELRNTP 248

Query: 370  SKARRLFKWYTTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSN 549
             KA   F+W      Y+  +  YN   RV+ + + +  FW+++EEM+     ++  ++  
Sbjct: 249  LKAYEFFRWVGRQSGYEHNTITYNAFARVLARTDSIEKFWSVIEEMKSVDHELDIDTYLK 308

Query: 550  LILRFYRYKRPEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVV---QKFLK 720
            +     R +  ED  KL+  L  D   + SV  CC +L+           +V    K  +
Sbjct: 309  ISRILQRNRMMEDAVKLYE-LMMDSSYKPSVEDCCFLLNSISESDKPNLDLVFRVSKKYE 367

Query: 721  DGGQAKKKMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADR 900
              G    K +Y+G+HR L   G+L+EAE ++  M   G    PD+ TYG ++ G C   R
Sbjct: 368  STGHTLSKAIYDGIHRSLASSGKLDEAEDIVNRMRNAG--HEPDNITYGQVIVGFCKMRR 425

Query: 901  LEEARQVIHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITS 1080
            LEEA +V+ +M + G   + K W  ++     A++ D+A+    +MIE   N+  TV++ 
Sbjct: 426  LEEACKVLEDMESCGCIPDTKTWTLLVQGYCVASEVDKALLCLHKMIEKGCNLDATVLSV 485

Query: 1081 LACYLCDKNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGH 1260
            L      + R  DAY L+ K +      P++G Y +++ +L      +EALN+L L + H
Sbjct: 486  LTDSFLGQKRIDDAYKLLVKVVTKHGASPSHGTYKKLIVNLLEIEKFEEALNLLCLTRKH 545

Query: 1261 GYTPIVDSLCEPIAKFGTADDAFSLIKKARKNGMPGRLCINLVKAFYDAGKQSEGDSLVG 1440
              TPI++   + I+ FG+ +DA   + K++ +     + + + K+    G+ S+ + L+ 
Sbjct: 546  KCTPILEPFVQYISNFGSVEDAVKFL-KSKGSSRSYLIYLRVFKSLLGKGRLSDAEDLLS 604

Query: 1441 RLPDYIAKTPDI 1476
            ++P YI+K  +I
Sbjct: 605  KIPSYISKRKEI 616


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score =  179 bits (453), Expect = 6e-42
 Identities = 122/434 (28%), Positives = 207/434 (47%), Gaps = 5/434 (1%)
 Frame = +1

Query: 223  NTKVEETNQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWY 399
            N   E+  +V  +++   WS + E+ L ++   +SE  V+  L  L   P KA R F+W 
Sbjct: 195  NAGDEDVKKVMDVVLGAEWSDKVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWV 254

Query: 400  TTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKR 579
                 Y+  S  YN +  V+ Q + +  FW+++EEM+  G  ++  ++  L  +F + K 
Sbjct: 255  EQCAGYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKM 314

Query: 580  PEDMAKLFLWLFEDGKDEFSVVKCCQVL---SGNXXXXXXPSGVVQKFLKDGGQAKKKMV 750
             ED  KL+  L  DG  + SV     +L   S N          V K  +  G    K V
Sbjct: 315  VEDAVKLYE-LMMDGPYKPSVQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAV 373

Query: 751  YNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHE 930
            Y+G+HR LT  GR +EAE  +  M   G  F PD+ TY  +V+GLC A +L+EA +++ +
Sbjct: 374  YDGIHRSLTNLGRFDEAEDTLIAMRNAG--FEPDNITYSQVVFGLCKAKKLDEACKLLDD 431

Query: 931  MRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNR 1110
            M   G   + K W  +I     AN+ D+A+    +M+E        ++  L   L  + +
Sbjct: 432  MEENGCVPDIKTWMILIQGHCAANEIDKALICFAKMMEKECKADADILDVLINGLIKQAK 491

Query: 1111 GMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLC 1290
               AY L+ + +    ++P    +  ++ +L  +  ++EA+ +L LMK  GY P  +   
Sbjct: 492  VDGAYKLLIEMLNTAHVRPWQATFKNLIQNLLGARKLEEAMELLCLMKKQGYPPYPEPFV 551

Query: 1291 EPIAKFGTADDAFSLIKKARKNGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYIAKT 1467
              I+KFG+ +DA    K       P     +++ K+F+  G+ SE   L+ + P +I K 
Sbjct: 552  GYISKFGSVEDASEFFKALSVKEYPSNAAYVHVFKSFFKEGRHSEAKDLLYKCPHHIRKL 611

Query: 1468 PDIWSITKGTSSGK 1509
             ++  +   T   K
Sbjct: 612  GEVRKLFGATERSK 625



 Score = 77.0 bits (188), Expect = 3e-11
 Identities = 82/385 (21%), Positives = 161/385 (41%), Gaps = 13/385 (3%)
 Frame = +1

Query: 244  NQVCSILVNNPWSVETEERLSDLS-TISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
            N V  ++++N WS E E  LS+   +++ D V+  L  L  +P+KA   F W      + 
Sbjct: 65   NSVLQLVLSNQWSPELETELSESHLSLTHDVVIYVLKKLNKDPAKAWSFFNWVCEKKGFS 124

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMA-- 594
            P  S+++ ++RV+  ++ +  FW ++  M++ GF ++  ++ +++      K   D++  
Sbjct: 125  PGHSMFSLMLRVLVHKDTMRQFWGVLTRMRDEGFYIDAQTYLSILELLKTGKMDADVSAF 184

Query: 595  -KLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRY 771
               +  + ++   +  V K   V+ G             K  K+ G+   ++    + R 
Sbjct: 185  KHFYERMIQENAGDEDVKKVMDVVLGAEWS--------DKVEKELGEIDVELSEKFVVRV 236

Query: 772  LTKDGRLEEAEKVMEV-MIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGM 948
            L +D R+   + +     +++   +  +  TY  +   L  A  + E   VI EM+  G 
Sbjct: 237  L-RDLRVCPLKALRFFRWVEQCAGYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQ 295

Query: 949  NLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVS-HTVITSLACYLCDKNRGMDAY 1125
             L+   +  +     K+   ++AV + E M++     S   V   L     ++   MD  
Sbjct: 296  ELDLDTYIKLSRQFQKSKMVEDAVKLYELMMDGPYKPSVQDVSILLRSISANERPDMDLV 355

Query: 1126 NLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTP-------IVDS 1284
              + K  E      +   Y  +   LT+ G   EA + L  M+  G+ P       +V  
Sbjct: 356  FRVVKKFESAGFTLSKAVYDGIHRSLTNLGRFDEAEDTLIAMRNAGFEPDNITYSQVVFG 415

Query: 1285 LCEPIAKFGTADDAFSLIKKARKNG 1359
            LC    K    D+A  L+    +NG
Sbjct: 416  LC----KAKKLDEACKLLDDMEENG 436


>gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus persica]
          Length = 675

 Score =  177 bits (448), Expect = 2e-41
 Identities = 121/431 (28%), Positives = 211/431 (48%), Gaps = 9/431 (2%)
 Frame = +1

Query: 244  NQVCSILVNNPWSVETEERLSDLST-ISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYK 420
            ++VC I+ N  WS + E ++ DL+  +S D V V L  L   P KA   F+W       K
Sbjct: 230  SRVCKIVRNEVWSGDVERKILDLNVALSSDMVKVVLENLSTEPMKALIFFRWMEESGFLK 289

Query: 421  PTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKL 600
                 YN + RV+ +E+    FW +V+EM+ NG+ +E  ++  ++ RF + K  +D   L
Sbjct: 290  HDQQTYNAMARVLGREDCKDRFWKVVDEMRSNGYELELETYVKVLGRFCKRKMIKDAVDL 349

Query: 601  FLWLFEDGKDEFSVVKCC-----QVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLH 765
            + +    G ++ SV  CC     ++  G        S VV+ F ++G      M+ N + 
Sbjct: 350  YEFALT-GANKPSV-HCCTFLLRKIAGGKQLDMSLFSRVVRVFTENGNVLTDSML-NAVL 406

Query: 766  RYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKG 945
            + L   GR  E  KV + M + G +     +    + + L +A + E++ + I+ M   G
Sbjct: 407  KALNGVGRHGECNKVFKAMEEGGLV--ASGSLQSKIAFRLSSAGKKEQSSEFINNMEASG 464

Query: 946  MNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHT--VITSLACYLCDKNRGMD 1119
             + + K+W  +I+    A   + A    ++M+E +E  ++       L    C KNR  D
Sbjct: 465  RSSDYKIWASLIEGHCVAGNLNNASNCFQKMLE-KEGAAYAGYAFELLVNAYCRKNRATD 523

Query: 1120 AYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPI 1299
            AY L+   +   ++KP +  Y  +++ L   G  K+ALN+LGLMK  G+ P VD   E +
Sbjct: 524  AYKLLHDSVNERQLKPWHMTYKLLISKLLVQGGFKDALNILGLMKNDGFPPFVDPFIEYV 583

Query: 1300 AKFGTADDAFSLIKKARKNGMPG-RLCINLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDI 1476
            +K GT DDA + +K    N  P   + +++ KA++ AG+ +E  + + + P +I    D+
Sbjct: 584  SKSGTGDDAIAFLKAMTSNRFPSTSVFLSVFKAYFKAGRHTEAQNFLSKCPGFIRNHADV 643

Query: 1477 WSITKGTSSGK 1509
              +     SG+
Sbjct: 644  LDLFLCAQSGE 654



 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 65/296 (21%), Positives = 112/296 (37%), Gaps = 1/296 (0%)
 Frame = +1

Query: 148  YQDHNTRHIKPLYQIFQPRNFSEAANTKVEETNQVCSILVNNPWSVETEERLS-DLSTIS 324
            +  H T  I P   + +  +   A   K  +   +  I   +    +  + L  +   IS
Sbjct: 61   FNSHLTTPINPRNPLSRSLSSEPALELKDSDHGAIAEIFAKHRGVDDIRKDLELNNVVIS 120

Query: 325  EDEVLVALNTLIGNPSKARRLFKWYTTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEE 504
             D VL  L +L  NP  ARR F W       + +S  YN ++ +      +  FW++V+ 
Sbjct: 121  HDLVLRVLKSLESNPDVARRFFDWVLACEGERLSSKSYNFMLGIFGVNGCVSEFWDLVDV 180

Query: 505  MQENGFSMEPSSFSNLILRFYRYKRPEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXX 684
            M++ G+ +        + +F +     D+ KL + +F  G  + S  K C  +       
Sbjct: 181  MKKKGYGVSKWVQDKALEKFEKDGLGGDVEKLRV-VFASGSTDNSPDKICSRVCKIVRNE 239

Query: 685  XXPSGVVQKFLKDGGQAKKKMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHTTY 864
                 V +K L         MV   L    T+  +     + ME    E      D  TY
Sbjct: 240  VWSGDVERKILDLNVALSSDMVKVVLENLSTEPMKALIFFRWME----ESGFLKHDQQTY 295

Query: 865  GYLVYGLCNADRLEEARQVIHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCE 1032
              +   L   D  +   +V+ EMR+ G  LE + +  ++    K     +AV + E
Sbjct: 296  NAMARVLGREDCKDRFWKVVDEMRSNGYELELETYVKVLGRFCKRKMIKDAVDLYE 351


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
            gi|565465717|ref|XP_006290750.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559456|gb|EOA23647.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559457|gb|EOA23648.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score =  176 bits (447), Expect = 3e-41
 Identities = 117/416 (28%), Positives = 204/416 (49%), Gaps = 7/416 (1%)
 Frame = +1

Query: 250  VCSILVNNPWSVETEERLSDLSTISEDEVLV-ALNTLIGNPSKARRLFKWYTTYHS-YKP 423
            V + ++   WS E E+ L ++  +  D  ++  L  L  +P KA   F W     S Y+ 
Sbjct: 199  VSAAVLKVDWSCEVEKELQEMKLVLSDNFVIRVLKELRDHPLKALAFFNWVGGSSSGYQH 258

Query: 424  TSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLF 603
            ++  YN  +RV+ + N +  FWN+V+EM+  G+ M+  ++  +  +F + +   +  KL+
Sbjct: 259  STVTYNAALRVLTRPNSVAEFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLY 318

Query: 604  LWLFEDGKDEFSVVKCCQVL----SGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRY 771
             ++  DG  +  V  C  +L    +G          V +KF +  G +  K VY+G+HR 
Sbjct: 319  EYMM-DGPFKPLVHDCSTLLRSLSAGPNPDLDLVFRVSRKF-ESSGNSLSKAVYDGIHRS 376

Query: 772  LTKDGRLEEAEKVMEVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMN 951
            LT  GR +EAE++++ M      + PD+ TY  LV+GLC A RLEEAR V+ +M  +G +
Sbjct: 377  LTSVGRFDEAEEIIKAM--RNASYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCS 434

Query: 952  LEPKMWKFIIDSLDKANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNRGMDAYNL 1131
             + K W  +I    K N+ D+A A    M+E   +V   ++  L      +NR   AY  
Sbjct: 435  PDIKTWTILIQGHCKNNELDKAFACFANMLEKGFDVDSDLLEVLIGGFLSQNRIEGAYKF 494

Query: 1132 MCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPIAKFG 1311
            + + +    ++P    Y  +++ L      +EAL++L +MK   Y    +     +AKFG
Sbjct: 495  LMEMVRNANVRPWQSTYKILIDKLLEIKKGEEALDLLQMMKKQNYPAYAEPFDGYLAKFG 554

Query: 1312 TADDAFSLIKKARKNGMPG-RLCINLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDI 1476
            T +DA   +        P      ++++AFY  G+ ++  +L+   P +    P I
Sbjct: 555  TLEDAKKFLDVLSSKDSPTFAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKI 610



 Score = 69.3 bits (168), Expect = 6e-09
 Identities = 78/363 (21%), Positives = 140/363 (38%), Gaps = 5/363 (1%)
 Frame = +1

Query: 199  PRNFSEAANTKVEETNQVCSILVNNPWSVETEE--RLSDLSTISEDEVLVALNTLIGNPS 372
            P  F     T     + +  +++ N WS E EE  R  D+S   E  + V L  L  NP 
Sbjct: 45   PGRFQWKYRTFASNPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYV-LRKLEKNPD 103

Query: 373  KARRLFKWYTTYHSYKPTSSLYNTVMRVVCQENHLYHFWNIVEEMQENGFSMEPSSFSNL 552
            KA     W        P++ LY+ ++R++ Q+  +  FW I+ EM++ GF ++  +++ +
Sbjct: 104  KAYCFIDWVLRDSGLSPSTPLYSIMLRILAQQRSMKRFWKILSEMKQGGFYLDDDTYTTV 163

Query: 553  ILRFYRYKRPEDMAKLFLWLFEDGKDEFSVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQ 732
                 + +   D   +  +     KD    V    V +         S  V+K L    Q
Sbjct: 164  YGELKKSESKADAVAVAHFYERMLKDNEMYVVARNVSAAVLKVDW--SCEVEKEL----Q 217

Query: 733  AKKKMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGPIFGPDHT--TYGYLVYGLCNADRLE 906
              K ++ +     + K+ R    + +       G   G  H+  TY   +  L   + + 
Sbjct: 218  EMKLVLSDNFVIRVLKELRDHPLKALAFFNWVGGSSSGYQHSTVTYNAALRVLTRPNSVA 277

Query: 907  EARQVIHEMRNKGMNLEPKMWKFIIDSLDKANKTDEAVAMCEEMIESR-ENVSHTVITSL 1083
            E   V+ EM+  G  ++   +  +     K+    EAV + E M++   + + H   T L
Sbjct: 278  EFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMDGPFKPLVHDCSTLL 337

Query: 1084 ACYLCDKNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVNHLTHSGMVKEALNMLGLMKGHG 1263
                   N  +D    + +  E      +   Y  +   LT  G   EA  ++  M+   
Sbjct: 338  RSLSAGPNPDLDLVFRVSRKFESSGNSLSKAVYDGIHRSLTSVGRFDEAEEIIKAMRNAS 397

Query: 1264 YTP 1272
            Y P
Sbjct: 398  YEP 400


>gb|AFW83859.1| hypothetical protein ZEAMMB73_953172 [Zea mays]
          Length = 598

 Score =  176 bits (447), Expect = 3e-41
 Identities = 121/425 (28%), Positives = 208/425 (48%), Gaps = 7/425 (1%)
 Frame = +1

Query: 292  EERLS--DLSTISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYKPTSSLYNTVMRVVCQ 465
            + RLS   L  ++E  V   L  L  +P KA   F+W      Y  +S  YN + RV+ +
Sbjct: 179  DSRLSAIGLLPLTETSVTTVLRELREHPIKALAFFRWAGRQQGYTHSSVAYNAMARVLGR 238

Query: 466  ENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLFLWL----FEDGKDE 633
            E  +  FW+++ E +  G  ++  ++  L   F R     +  +L+  +    F+  + +
Sbjct: 239  EESVPEFWDLIRETKAAGMHVDIDTYLKLSRNFQRRHMVREAVELYELMMDGPFKPAQQD 298

Query: 634  FSVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRYLTKDGRLEEAEKVM 813
              ++   ++  G        + VV KF    G  K K + +G+HR LT++G  +EA +++
Sbjct: 299  GPII-IRRISMGPSPDLELVNRVVNKFEAVWG-VKTKELLDGVHRALTRNGMFDEAAEIV 356

Query: 814  EVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMNLEPKMWKFIIDSLD 993
            + M  +G    PD+ TY  LVYGLC AD+LE+AR+V+ EM  +G   + K W  +I    
Sbjct: 357  QTMKAQG--HQPDNVTYSQLVYGLCKADKLEDARKVLDEMEAEGCVPDLKTWTLLIHGCC 414

Query: 994  KANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNRGMDAYNLMCKGIEGIKMKPAY 1173
             A   D AV    EMIE   +    ++  +   LC   +  +AY+   + ++  +++P  
Sbjct: 415  LAGDVDRAVQYLTEMIEKGLDADANLLDVILKGLCSHEKVEEAYSFFIEMVDKTELRPWQ 474

Query: 1174 GPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPIAKFGTADDAFSLIKKARK 1353
            G    ++N L     ++EAL++L  MK   + P  D     IAK+GT +DA +  K    
Sbjct: 475  GTCQHLINDLLRVNKLEEALSLLKTMKTCKFPPFADPFPPYIAKYGTVEDARNFFKAMTV 534

Query: 1354 NGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDIWSITKGTSSGKRESEVST 1530
            N  P  +  ++++K F+  G+ SE   L+   P++I K PD   + K   S K ES  ++
Sbjct: 535  NTSPEPVAYLHVLKLFFAEGRYSEAQDLLYGCPNHIRKHPD---VIKLFGSIKVESASAS 591

Query: 1531 KKGDT 1545
            + G +
Sbjct: 592  RLGSS 596


>ref|NP_001132329.1| uncharacterized protein LOC100193771 [Zea mays]
            gi|194694094|gb|ACF81131.1| unknown [Zea mays]
          Length = 502

 Score =  176 bits (447), Expect = 3e-41
 Identities = 121/425 (28%), Positives = 208/425 (48%), Gaps = 7/425 (1%)
 Frame = +1

Query: 292  EERLS--DLSTISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYKPTSSLYNTVMRVVCQ 465
            + RLS   L  ++E  V   L  L  +P KA   F+W      Y  +S  YN + RV+ +
Sbjct: 83   DSRLSAIGLLPLTETSVTTVLRELREHPIKALAFFRWAGRQQGYTHSSVAYNAMARVLGR 142

Query: 466  ENHLYHFWNIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLFLWL----FEDGKDE 633
            E  +  FW+++ E +  G  ++  ++  L   F R     +  +L+  +    F+  + +
Sbjct: 143  EESVPEFWDLIRETKAAGMHVDIDTYLKLSRNFQRRHMVREAVELYELMMDGPFKPAQQD 202

Query: 634  FSVVKCCQVLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRYLTKDGRLEEAEKVM 813
              ++   ++  G        + VV KF    G  K K + +G+HR LT++G  +EA +++
Sbjct: 203  GPII-IRRISMGPSPDLELVNRVVNKFEAVWG-VKTKELLDGVHRALTRNGMFDEAAEIV 260

Query: 814  EVMIKEGPIFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMNLEPKMWKFIIDSLD 993
            + M  +G    PD+ TY  LVYGLC AD+LE+AR+V+ EM  +G   + K W  +I    
Sbjct: 261  QTMKAQG--HQPDNVTYSQLVYGLCKADKLEDARKVLDEMEAEGCVPDLKTWTLLIHGCC 318

Query: 994  KANKTDEAVAMCEEMIESRENVSHTVITSLACYLCDKNRGMDAYNLMCKGIEGIKMKPAY 1173
             A   D AV    EMIE   +    ++  +   LC   +  +AY+   + ++  +++P  
Sbjct: 319  LAGDVDRAVQYLTEMIEKGLDADANLLDVILKGLCSHEKVEEAYSFFIEMVDKTELRPWQ 378

Query: 1174 GPYMEVVNHLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPIAKFGTADDAFSLIKKARK 1353
            G    ++N L     ++EAL++L  MK   + P  D     IAK+GT +DA +  K    
Sbjct: 379  GTCQHLINDLLRVNKLEEALSLLKTMKTCKFPPFADPFPPYIAKYGTVEDARNFFKAMTV 438

Query: 1354 NGMPGRLC-INLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDIWSITKGTSSGKRESEVST 1530
            N  P  +  ++++K F+  G+ SE   L+   P++I K PD   + K   S K ES  ++
Sbjct: 439  NTSPEPVAYLHVLKLFFAEGRYSEAQDLLYGCPNHIRKHPD---VIKLFGSIKVESASAS 495

Query: 1531 KKGDT 1545
            + G +
Sbjct: 496  RLGSS 500


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score =  176 bits (446), Expect = 4e-41
 Identities = 117/396 (29%), Positives = 198/396 (50%), Gaps = 7/396 (1%)
 Frame = +1

Query: 310  LSTISEDEVLVALNTLIGNPSKARRLFKWYTTYHSYKPTSSLYNTVMRVVCQENHLYHFW 489
            L  ++E  V   L  L   P KA   F+W      Y   S  YN + RV+ +E  +  FW
Sbjct: 181  LLPLTETTVAKVLRELRDCPVKALGFFRWAGRQKGYTHGSVAYNAMARVLGREESVQEFW 240

Query: 490  NIVEEMQENGFSMEPSSFSNLILRFYRYKRPEDMAKLFLWLFEDG----KDEFSVVKCCQ 657
             +++EM+ +G  ++  ++  L  +F +     +  +L+  L  DG      +   V   +
Sbjct: 241  ELIQEMKADGIYLDIDTYVKLNRQFQKRHMMTEAVELYE-LMMDGPYKPSKQDGPVLLRR 299

Query: 658  VLSGNXXXXXXPSGVVQKFLKDGGQAKKKMVYNGLHRYLTKDGRLEEAEKVMEVMIKEGP 837
            +  G          VV+KF +   + K K V++G+HR LT +GR +EA +VME M  EG 
Sbjct: 300  IALGPSPDLELAHRVVRKF-EAVYEFKTKDVFDGIHRALTSNGRFDEAAEVMESMRSEG- 357

Query: 838  IFGPDHTTYGYLVYGLCNADRLEEARQVIHEMRNKGMNLEPKMWKFIIDSLDKANKTDEA 1017
               PD+ TY  LV+GLC A++ +EAR+V+ EM N+G   + K W  +I     A + D+A
Sbjct: 358  -HQPDNITYSQLVFGLCKANKCDEARKVLVEMENEGCAPDLKTWTMLIQGHCTAGEVDKA 416

Query: 1018 VAMCEEMIESRENVSHTVITSLACYLCDKNRGMDAYNLMCKGIEGIKMKPAYGPYMEVVN 1197
            +    EMIE+  +    ++  +   LC++++   AY L  + ++  ++ P  G Y  +++
Sbjct: 417  LQYLTEMIENNLDADADLLDVMVRGLCNQDKVDAAYTLFVEMVDKAQLNPWQGTYKHIIS 476

Query: 1198 HLTHSGMVKEALNMLGLMKGHGYTPIVDSLCEPIAKFGTADDAFSLIK--KARKNGMPGR 1371
             L     ++EAL +L  MK   + P  D     IA++GT +DA   +K  K   N  P  
Sbjct: 477  ELLRVKKLEEALGLLKSMKARKFPPFADPFPPNIAEYGTLEDAKDFLKALKGGVNSYPSH 536

Query: 1372 LC-INLVKAFYDAGKQSEGDSLVGRLPDYIAKTPDI 1476
               +++ K+F+  G+ SE   L+ + P +I +  DI
Sbjct: 537  TAYLHMFKSFFAEGRYSEAQDLLYKCPIHIRRHHDI 572