BLASTX nr result
ID: Ephedra26_contig00014966
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00014966 (2041 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001008646.1| Bifunctional endo-1,4-beta-xylanase xylA pre... 62 7e-07 ref|XP_638677.1| RNA-binding region RNP-1 domain-containing prot... 60 5e-06 >ref|XP_001008646.1| Bifunctional endo-1,4-beta-xylanase xylA precursor, putative [Tetrahymena thermophila] gi|89290413|gb|EAR88401.1| hypothetical protein TTHERM_00163920 [Tetrahymena thermophila SB210] Length = 449 Score = 62.4 bits (150), Expect = 7e-07 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 10/153 (6%) Frame = +1 Query: 520 NNKNGQRMR----GAINQPDHHARPENNFHPNKFQSNNVHHKFPGKH-LSQRNFEKNFNQ 684 NN NGQ + G NQ +++ + NN + N Q+N H+ G++ + N + N N Sbjct: 203 NNNNGQNNQNNNNGQNNQNNNNGQNNNNNNNNNNQNNQNHNNNNGQNNQNNNNGQNNQNN 262 Query: 685 RRPQNYIDPRVSADNDNAEKNGKANVSENNVST-----NMAENNGNTSMAEINENADCTN 849 QN + DN N + N K N S+NN + N NN N S N N N Sbjct: 263 NNGQN----NNNQDNKNDQNNQKNNNSQNNQNNSNNNQNNQNNNNNNSQNNQNNNNGQNN 318 Query: 850 ENTNMAEIIDNADCANDSEGGASCRQGQKGQKN 948 +N N + +N D N+++ + ++ GQ N Sbjct: 319 QNNNNGQNNNNQDNKNNNKNDQNNQKNNNGQNN 351 Score = 58.9 bits (141), Expect = 8e-06 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 2/145 (1%) Frame = +1 Query: 520 NNKNGQRMRGAINQPDHHARPENNFHPNKFQSNNVHHKFPGKHLSQRNFEKNFNQRRPQN 699 NN NGQ N+ D + + NN N+ SNN + + + +N + N N + QN Sbjct: 261 NNNNGQNNNNQDNKNDQNNQKNNNSQNNQNNSNNNQNNQNNNNNNSQNNQNNNNGQNNQN 320 Query: 700 YIDPR--VSADNDNAEKNGKANVSENNVSTNMAENNGNTSMAEINENADCTNENTNMAEI 873 + + + DN N KN + N NN N NN N N N+D N N Sbjct: 321 NNNGQNNNNQDNKNNNKNDQNNQKNNNGQNNQNNNNNN------NNNSDNQNNQNNNKNN 374 Query: 874 IDNADCANDSEGGASCRQGQKGQKN 948 N N+ + + GQ Q N Sbjct: 375 GQNNQNNNNGQNNQNNNNGQNNQNN 399 >ref|XP_638677.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4] gi|60467316|gb|EAL65349.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4] Length = 892 Score = 59.7 bits (143), Expect = 5e-06 Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 8/223 (3%) Frame = +1 Query: 451 LKMEGEEPVVPSVKSKTFHPRIPNNKNG-QRMRGAINQPDHHARPENNFHPNKFQSNNVH 627 + ++G++ ++ +V + PNN+N + + N + + + NN + N SNN+ Sbjct: 41 MNIQGQQAIMGAVNQELISE--PNNRNNSETLNNNNNNNNKNNKKNNNNNNNNSSSNNIK 98 Query: 628 HKFPGKH-----LSQRNFE--KNFNQRRPQNYIDPRVSADNDNAEKNGKANVSENNVSTN 786 K+ +S+ +FE +N N+ + N D + +NDN N N + NN + N Sbjct: 99 ETDGNKNDVENEISEVDFEGSENENENKNTNQNDIKNENENDNNNNNNNNNNNNNNNNNN 158 Query: 787 MAENNGNTSMAEINENADCTNENTNMAEIIDNADCANDSEGGASCRQGQKGQKNWKXXXX 966 NN N + N N NEN N E + + N++E + +K+ + Sbjct: 159 NNNNNNNNNNNNNNNNNSNENENENENENENENENENENENAKENENENEKEKDNEDNKE 218 Query: 967 XXXXXXXXVQHSFENGEKVGKRKNKFSANGASHGYSNPVRESN 1095 +++ E+ N + N ++ +N +N Sbjct: 219 SKTSPPQKIKNLDESNNNSNSNSNSNNNNNNNNNNNNNNNNNN 261