BLASTX nr result

ID: Ephedra26_contig00014916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00014916
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003515407.1| PREDICTED: LOW QUALITY PROTEIN: keratin-asso...    58   1e-06
ref|XP_004390415.1| PREDICTED: keratin-associated protein 4-3-li...    56   6e-06

>ref|XP_003515407.1| PREDICTED: LOW QUALITY PROTEIN: keratin-associated protein 4-4-like
           [Cricetulus griseus]
          Length = 199

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 38/119 (31%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
 Frame = -3

Query: 398 SSCCQPNLAVCFSCCPPKLEPATSFSFCPLEPDKDF--------------SCCPIDNATG 261
           SSCC+P+      C PP   P+   S C     +                SCCP      
Sbjct: 42  SSCCRPSCCPASCCVPPCCRPSCCVSSCXRASCRPPCCRPSCCVSRCCRPSCCPPSCCVS 101

Query: 260 SCCFPSKFST*ECCFSCCLSKTALPSPCCPSTSAAQASLETC--SYCISKTVIGSSWSR 90
           SCC PS   T  C  SCC+S    PS C PS   +     +C    C S +  GSS  R
Sbjct: 102 SCCRPSCCQTTCCRPSCCVSSCCRPSCCRPSCCVSSCCRPSCCRPCCSSSSCCGSSCCR 160


>ref|XP_004390415.1| PREDICTED: keratin-associated protein 4-3-like [Trichechus manatus
           latirostris]
          Length = 213

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/114 (34%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
 Frame = -3

Query: 398 SSCCQPNLAVCFSCCPPKLEPATSFSFCPLEPDKDFSCCPIDNATGSCCFPSKFST*ECC 219
           SSCC P+  V  SCC     P+   S C        SCC   +   SCC PS FS   CC
Sbjct: 106 SSCCHPSSCVS-SCC----RPSYCVSSCCRPSSCVSSCCRPSSCVSSCCRPS-FSVSSCC 159

Query: 218 F-SCCLSKTALPSPCCPSTSAAQASLETCSY------------CISKTVIGSSW 96
             S C+S    PS C PS S +     +C +            C      GSSW
Sbjct: 160 HPSSCVSSCCQPSCCRPSCSVSSCCRPSCCHPVCCQTTCCRTTCCHPNCCGSSW 213