BLASTX nr result
ID: Ephedra26_contig00014809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00014809
(1139 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 47 1e-08
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 53 2e-08
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 50 4e-08
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 50 5e-08
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 50 5e-08
emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera] 49 1e-07
emb|CBI37296.3| unnamed protein product [Vitis vinifera] 48 6e-07
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 40 8e-07
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 48 8e-07
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 45 2e-06
gb|EFN71322.1| Retrovirus-related Pol polyprotein from transposo... 42 2e-06
emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera] 47 3e-06
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera] 47 8e-06
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Frame = +1
Query: 751 VKTAGQEILPIRGFEDITLNFGNN-KIILTDALYVEGLRKNLISLYKLLTQKYKMFTFQK 927
VK + G D+ L N K++L D +V +R NLIS+ KL + Y TF
Sbjct: 320 VKMGNANFSTVVGKGDVCLETMNGMKLLLRDVRHVPDMRLNLISVDKLDEEGY-CNTFHN 378
Query: 928 ENG*RCCQISYNQKIVAEGTEQNGLFVMKPMLTECFLT---NTDISNLWHNRLGHINNEY 1098
+++ +VA GT+Q+ L+V + +++ + N LWH RLGH++ +
Sbjct: 379 GQW----KLTKGSLMVARGTKQSKLYVTQASISQQVINVAENDSNIKLWHRRLGHMSEKS 434
Query: 1099 LGKV 1110
+ ++
Sbjct: 435 MARL 438
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 49/233 (21%), Positives = 85/233 (36%), Gaps = 8/233 (3%)
Frame = +2
Query: 38 KLRNILAGSTAAMVAGLRKQSHNLSFTKEKPMVEFIQEVCKIRDRFYVCGIQIDDFELFY 217
KL + A T + + + + + + + E+ I D+ GI+ DD L
Sbjct: 85 KLEELYASKTGNNKLFYLTKLMQVKYVEGTTVADHLNEIQGIVDQLSGMGIKFDDEVLAL 144
Query: 218 LVMDALPSSWDAFKDSI-------CLIKDKISFDALCQVLLEKEQGNNRKISSEYEAL-Y 373
+V+ LP SW+ K SI + + + L + + + QG + SS+ E L
Sbjct: 145 MVLATLPESWETLKVSITNSAPNGVVNMETVKSGILNEEMRRRSQGTS---SSQSEVLAV 201
Query: 374 AQK*NNKRSYQXXXXXXXXXXXXXXXXYYHICNMKNHKTKYCSFNEKCSNYNSNRRRKPR 553
+ ++ Q H C K H ++C + N ++ KP
Sbjct: 202 TTRGRSQNKSQSNRDKSRGKSNKFANVECHYCKKKGHIKRFCRQFQNDQKKNKGKKVKPE 261
Query: 554 SSH*MPSNQTPIEANMVEIKGDQACVFFTNKDFDKDE*FLDSGCNSHMIGNRE 712
S +N E N+V D + T ++ +DSG H RE
Sbjct: 262 ESSDDETNSFG-EFNVVY---DDDIINLTTQEMTW---VIDSGATIHATPRRE 307
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 53.1 bits (126), Expect(2) = 2e-08
Identities = 51/236 (21%), Positives = 94/236 (39%), Gaps = 10/236 (4%)
Frame = +2
Query: 38 KLRNILAGSTAAMVAGLRKQSHNLSFTKEKPMVEFIQEVCKIRDRFYVCGIQIDDFELFY 217
KL +I ++ + L +E ++ I E KI ++ DD +L
Sbjct: 86 KLESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHIAEFKKIVADLVSMEVKYDDEDLGL 145
Query: 218 LVMDALPSSWDAFKDSICLIKDKISFDALCQVLLEKEQ-----GNNRKISSEYEALYAQ- 379
L++ +LP+S+ F+D+I L +D+++ + L KE+ N+ SS+ EAL+ +
Sbjct: 146 LLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRG 205
Query: 380 ----K*NNKRSYQXXXXXXXXXXXXXXXXYYHICNMKNHKTKYCSFNEKCSNYNSNRRRK 547
K +N+++Y Y C +KNH ++C + R+
Sbjct: 206 RTENKTSNEKNYDRRGRSKSKPPGNKKFCVY--CKLKNHNI------DECKKVQAKERKN 257
Query: 548 PRSSH*MPSNQTPIEANMVEIKGDQACVFFTNKDFDKDE*FLDSGCNSHMIGNREY 715
+ + A + + V F DE LDS C+ H+ R +
Sbjct: 258 KKD-----GKVSVASAAVSDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNW 308
Score = 33.1 bits (74), Expect(2) = 2e-08
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Frame = +1
Query: 832 LTDALYVEGLRKNLISLYKLLTQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQNG-LFV 1008
L + Y+ G+ +NLISL L + YK + +G ++S + +G + L+V
Sbjct: 349 LKNVRYIPGMSRNLISLSTLDAEGYK---YSGSDG--VLKVSKGSLVCLKGDLNSAKLYV 403
Query: 1009 MKPML------TECFLTNTDIS--NLWHNRLGHINNEYLGKVE 1113
++ +TN + S NLWH RLGH++ +LG E
Sbjct: 404 LRGCTLPGSDSAAAAVTNDEPSKTNLWHMRLGHMS--HLGMTE 444
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 50.1 bits (118), Expect(2) = 4e-08
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 10/236 (4%)
Frame = +2
Query: 38 KLRNILAGSTAAMVAGLRKQSHNLSFTKEKPMVEFIQEVCKIRDRFYVCGIQIDDFELFY 217
KL +I ++ + L +E ++ + E KI ++ DD +L
Sbjct: 84 KLESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHMAEFKKIVADLVSMEVKYDDEDLGL 143
Query: 218 LVMDALPSSWDAFKDSICLIKDKISFDALCQVLLEKEQ-----GNNRKISSEYEALYAQ- 379
L++ +LP+S+ F+D+I L +D+++ + L KE+ N+ SS+ EAL+ +
Sbjct: 144 LLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRG 203
Query: 380 ----K*NNKRSYQXXXXXXXXXXXXXXXXYYHICNMKNHKTKYCSFNEKCSNYNSNRRRK 547
+ +N+++Y Y C +KNH ++C + R+
Sbjct: 204 RTENRTSNEKNYDRRGRSKSKPPGNKKFCVY--CKLKNHNI------DECKKVQAKERKN 255
Query: 548 PRSSH*MPSNQTPIEANMVEIKGDQACVFFTNKDFDKDE*FLDSGCNSHMIGNREY 715
+ + A + V F DE LDS C+ H+ R +
Sbjct: 256 KKD-----GKVSVASAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNW 306
Score = 35.4 bits (80), Expect(2) = 4e-08
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Frame = +1
Query: 832 LTDALYVEGLRKNLISLYKLLTQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQNG-LFV 1008
L + Y+ G+ +NLISL L + YK + +G ++S + +G + L+V
Sbjct: 347 LKNVRYIPGMSRNLISLSTLDAEGYK---YSGSDG--VLKVSKGSLVCLKGDVNSAKLYV 401
Query: 1009 MKPMLTECFLTNTDIS------------NLWHNRLGHINNEYLGKVE 1113
++ C LT +D + NLWH RLGH++ +LG E
Sbjct: 402 LRG----CTLTGSDSAAAAITNDEPSKTNLWHMRLGHMS--HLGMTE 442
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 50.1 bits (118), Expect(2) = 5e-08
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 10/236 (4%)
Frame = +2
Query: 38 KLRNILAGSTAAMVAGLRKQSHNLSFTKEKPMVEFIQEVCKIRDRFYVCGIQIDDFELFY 217
KL +I ++ + L +E ++ + E KI ++ DD +L
Sbjct: 84 KLESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHMAEFKKIVADLVSMEVKYDDEDLGL 143
Query: 218 LVMDALPSSWDAFKDSICLIKDKISFDALCQVLLEKEQ-----GNNRKISSEYEALYAQ- 379
L++ +LP+S+ F+D+I L +D+++ + L KE+ N+ SS+ EAL+ +
Sbjct: 144 LLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRG 203
Query: 380 ----K*NNKRSYQXXXXXXXXXXXXXXXXYYHICNMKNHKTKYCSFNEKCSNYNSNRRRK 547
+ +N+++Y Y C +KNH ++C + R+
Sbjct: 204 RTENRTSNEKNYDRRGRSKSKPPGNKKFCVY--CKLKNHNI------DECKKVQAKERKN 255
Query: 548 PRSSH*MPSNQTPIEANMVEIKGDQACVFFTNKDFDKDE*FLDSGCNSHMIGNREY 715
+ + A + V F DE LDS C+ H+ R +
Sbjct: 256 KKD-----GKVSVASAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNW 306
Score = 35.0 bits (79), Expect(2) = 5e-08
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Frame = +1
Query: 832 LTDALYVEGLRKNLISLYKLLTQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQNG-LFV 1008
L + Y+ G+ +NLISL L + YK + +G ++S + +G + L+V
Sbjct: 347 LKNVRYIPGMSRNLISLSTLDAEGYK---YSGSDG--VLKVSKGSLVCLKGDLNSAKLYV 401
Query: 1009 MKPMLTECFLTNTDIS------------NLWHNRLGHINNEYLGKVE 1113
++ C LT +D + NLWH RLGH++ +LG E
Sbjct: 402 LRG----CTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMS--HLGMTE 442
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 50.1 bits (118), Expect(2) = 5e-08
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 10/236 (4%)
Frame = +2
Query: 38 KLRNILAGSTAAMVAGLRKQSHNLSFTKEKPMVEFIQEVCKIRDRFYVCGIQIDDFELFY 217
KL +I ++ + L +E ++ + E KI ++ DD +L
Sbjct: 84 KLESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHMAEFKKIVADLVSMEVKYDDEDLGL 143
Query: 218 LVMDALPSSWDAFKDSICLIKDKISFDALCQVLLEKEQ-----GNNRKISSEYEALYAQ- 379
L++ +LP+S+ F+D+I L +D+++ + L KE+ N+ SS+ EAL+ +
Sbjct: 144 LLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRG 203
Query: 380 ----K*NNKRSYQXXXXXXXXXXXXXXXXYYHICNMKNHKTKYCSFNEKCSNYNSNRRRK 547
+ +N+++Y Y C +KNH ++C + R+
Sbjct: 204 RTENRTSNEKNYDRRGRSKSKPPGNKKFCVY--CKLKNHNI------DECKKVQAKERKN 255
Query: 548 PRSSH*MPSNQTPIEANMVEIKGDQACVFFTNKDFDKDE*FLDSGCNSHMIGNREY 715
+ + A + V F DE LDS C+ H+ R +
Sbjct: 256 KKD-----GKVSVASAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNW 306
Score = 35.0 bits (79), Expect(2) = 5e-08
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Frame = +1
Query: 832 LTDALYVEGLRKNLISLYKLLTQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQNG-LFV 1008
L + Y+ G+ +NLISL L + YK + +G ++S + +G + L+V
Sbjct: 347 LKNVRYIPGMSRNLISLSTLDAEGYK---YSGSDG--VLKVSKGSLVCLKGDLNSAKLYV 401
Query: 1009 MKPMLTECFLTNTDIS------------NLWHNRLGHINNEYLGKVE 1113
++ C LT +D + NLWH RLGH++ +LG E
Sbjct: 402 LRG----CTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMS--HLGMTE 442
>emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
Length = 1226
Score = 48.9 bits (115), Expect(2) = 1e-07
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Frame = +1
Query: 715 FTNFRNTYDEKFVKTAGQEILPIRGFEDITLNFGNNKIILTDALYVEGLRKNLISLYKLL 894
F++F T+ + VK + + G ++ L I+T YV L+ NL+S+ +L
Sbjct: 255 FSDFDGTFRDS-VKLXNNTSMXVLGKGNVRLKVNEMTQIITGVFYVPELKNNLLSIGQL- 312
Query: 895 TQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQ--NGLFVM----KPMLTECFLTNT-DI 1053
+ K T ++G C++ ++QK + T+ N +F++ +P+ + CF T T DI
Sbjct: 313 --QEKGLTILFQHG--KCKVFHSQKXLIMDTKMSSNRMFMLHALSQPISSTCFNTVTADI 368
Query: 1054 SNLWHNRLGHIN 1089
LWH R GH++
Sbjct: 369 LQLWHCRYGHLS 380
Score = 35.0 bits (79), Expect(2) = 1e-07
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 641 NKDFDKDE*FLDSGCNSHMIGNREY 715
NK +D FLDSGCN+HM G ++Y
Sbjct: 230 NKTSREDTWFLDSGCNNHMCGKKDY 254
>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
Length = 3048
Score = 48.1 bits (113), Expect(2) = 6e-07
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Frame = +1
Query: 715 FTNFRNTYDEKFVKTAGQEILPIRGFEDITLNFGNNKIILTDALYVEGLRKNLISLYKLL 894
F++F T+ + VK + + G ++ L I+T YV L+ NL+S+ +L
Sbjct: 337 FSDFDGTFRDS-VKLGNNTSMSVLGKGNVRLKVNEMTQIITGVFYVPELKNNLLSIGQL- 394
Query: 895 TQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQ--NGLFVM----KPMLTECFLTNT-DI 1053
+ K T ++G C++ ++QK + T+ N +F++ +P+ + CF T T DI
Sbjct: 395 --QEKGLTILFQHG--KCKVFHSQKGLIMDTKMSSNRMFMLYALSQPISSTCFNTVTEDI 450
Query: 1054 SNLWHNRLGHIN 1089
LWH R GH++
Sbjct: 451 LQLWHCRYGHLS 462
Score = 33.1 bits (74), Expect(2) = 6e-07
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 641 NKDFDKDE*FLDSGCNSHMIGNREY 715
NK +D FLDSGC++HM G ++Y
Sbjct: 312 NKTSREDTWFLDSGCSNHMCGKKDY 336
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 40.4 bits (93), Expect(2) = 8e-07
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 7/215 (3%)
Frame = +2
Query: 92 KQSHNLSFTKEKPMVEFIQEVCKIRDRFYVCGIQIDDFELFYLVMDALPSSWDAFKDSIC 271
K S NLS E + EF+Q + + + + I D + L++ ALP ++D KD++
Sbjct: 126 KMSENLSV--EGNIDEFLQIITDLENM----NVIISDEDQAILLLTALPKAFDQLKDTLK 179
Query: 272 LIKDK--ISFDALCQVLLEKEQ--GNNRK-ISSEYEALYAQK*N-NKRSYQXXXXXXXXX 433
K ++ D + + KE G+ +K I + E LY + N NK +
Sbjct: 180 YSSGKSILTLDEVAAAIYSKELELGSVKKSIKVQAEGLYVKDKNENKGKGEQKGKGKGKK 239
Query: 434 XXXXXXXYYHICNMKNHKTKYCSFNEKCSNYNSNRRRKPRSSH*MPSNQTPIEANMVEIK 613
C + H F C N N + ++ S + + + N+ E
Sbjct: 240 GKSKKKPGCWTCGEEGH------FRSSCPNQNKPQFKQ---SQVVKGESSGGKGNLAEAA 290
Query: 614 GDQACVFFTNKDFD-KDE*FLDSGCNSHMIGNREY 715
G ++ + +DE LD+GC+ HM RE+
Sbjct: 291 GYYVSEALSSTEVHLEDEWILDTGCSYHMTYKREW 325
Score = 40.4 bits (93), Expect(2) = 8e-07
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Frame = +1
Query: 751 VKTAGQEILPIRGFEDITL-NFGNNKIILTDALYVEGLRKNLISLYKLLTQKYKMFTFQK 927
V+ + + +RG I + N I+LT+ Y+ + +NL+SL YK F+
Sbjct: 337 VRMGNKTVSRVRGVGTIRVKNSDGLTIVLTNVRYIPDMDRNLLSLGTFEKAGYK---FES 393
Query: 928 ENG*RCCQISYNQKIVAEGTEQNGLFVM--KPMLTE--CFLTNTDISNLWHNRLGHINNE 1095
E+G +I +++ G + L+++ KP+ +E + D + LWH RL H++ +
Sbjct: 394 EDG--ILRIKAGNQVLLTGRRYDTLYLLNWKPVASESLAVVKRADDTVLWHQRLCHMSQK 451
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 47.8 bits (112), Expect(2) = 8e-07
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Frame = +2
Query: 188 IQIDDFELFYLVMDALPSSWDAFKDSICLIKDKISFDALCQVLLEKEQ----GNNRKISS 355
+Q DD +L L++ +LPSS+ F+D+I L +D+++ + + L +E+ + SS
Sbjct: 138 VQFDDEDLGLLLLCSLPSSYANFRDTILLSRDELTLAEVYEALQNREKMKGMVQSDASSS 197
Query: 356 EYEALYAQK*NNKRSY----QXXXXXXXXXXXXXXXXYYHICNMKNHKTKYCSFNEKCSN 523
+ EAL + + +R+Y + C KNH F E+C
Sbjct: 198 KGEALQVRGRSEQRTYNDSSDRDKSQSRGRSKSRGKKFCKYCKKKNH------FIEECWK 251
Query: 524 YNSNRRRKPRSSH*MPSNQTPIEANMVEIKGDQACVFFTNKDFDKDE*FLDSGCNSHMIG 703
+ +RK + + + V F DE LD+ C+ H+
Sbjct: 252 LQNKEKRK-------SDGKASVVTSAENSDSGDCLVVFAGCVASHDEWILDTACSFHICI 304
Query: 704 NREY 715
NR++
Sbjct: 305 NRDW 308
Score = 33.1 bits (74), Expect(2) = 8e-07
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Frame = +1
Query: 832 LTDALYVEGLRKNLISLYKLLTQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQNG-LFV 1008
L D ++ G+ +NLISL L + YK + G ++S + G + L+V
Sbjct: 349 LKDVRHIPGMARNLISLSTLDAEGYK---YSSSGG--VVKVSKGSLVYMIGDMNSANLYV 403
Query: 1009 MKPMLTECFLTNTDIS-------NLWHNRLGHINNEYLGKVE 1113
++ +T +S NLWH RLGH++ LG E
Sbjct: 404 LRGSTLHGSVTAAAVSKDEPIKTNLWHMRLGHMSE--LGMAE 443
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 8/184 (4%)
Frame = +2
Query: 188 IQIDDFELFYLVMDALPSSWDAFKDSICLIKDKISFDALCQVLLEKEQ----GNNRKISS 355
+Q DD +L L++ +LPSS+ F+ +I L +D+++ + + L +E+ + SS
Sbjct: 138 VQFDDEDLGLLLLCSLPSSYANFRHTILLSRDELTLAEVYEALQNREKMKGMVQSYASSS 197
Query: 356 EYEALYAQK*NNKRSY----QXXXXXXXXXXXXXXXXYYHICNMKNHKTKYCSFNEKCSN 523
+ EAL + + +R+Y + C KNH F E+C
Sbjct: 198 KGEALQVRGRSEQRTYNDSNDHDKSQSRGRSKSRGKKFCKYCKKKNH------FIEECWK 251
Query: 524 YNSNRRRKPRSSH*MPSNQTPIEANMVEIKGDQACVFFTNKDFDKDE*FLDSGCNSHMIG 703
+ +RK + + + V F DE LD+ C+ H+
Sbjct: 252 LQNKEKRK-------SDGKASVVTSAENSDSGDCLVVFAGYVASHDEWILDTACSFHICI 304
Query: 704 NREY 715
NR++
Sbjct: 305 NRDW 308
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Frame = +1
Query: 715 FTNFRNTYDEKFVKTAGQEILPIRGFEDITLNFGNNKI-ILTDALYVEGLRKNLISLYKL 891
F+++++ +E V+ I G + + + L D ++ G+ +NLISL L
Sbjct: 309 FSSYKSVQNEDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTL 368
Query: 892 LTQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQNG-LFVMKPM-----LTECFLTNTDI 1053
+ YK + G ++S + G + L+V++ +T +T +
Sbjct: 369 DAEGYK---YSGSGG--VVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEP 423
Query: 1054 S--NLWHNRLGHINNEYLGKVE 1113
S NLWH RLGH++ LG E
Sbjct: 424 SKTNLWHMRLGHMSE--LGMAE 443
>gb|EFN71322.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Camponotus floridanus]
Length = 491
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 47/226 (20%), Positives = 82/226 (36%), Gaps = 1/226 (0%)
Frame = +2
Query: 38 KLRNILAGSTAAMVAGLRKQSHNLSFTKEKPMVEFIQEVCKIRDRFYVCGIQIDDFELFY 217
KL +I A A A L K + + + + ++ D+ ++I+ L
Sbjct: 92 KLESIYASKGPARKATLLKSLMLRKMPDDGDVKDHLNDLFDAVDKLQSMNVEINGDMLAV 151
Query: 218 LVMDALPSSWDAFKDSICLIKDKISFDALCQVLLEKEQGNNRKISSEYEALYAQK*NNKR 397
+++ +LP S+D F+ +I D + L + E+ + RKIS + K N++
Sbjct: 152 IILYSLPESYDTFRCAIESRDDLPDVETLKIKIFEESEARKRKISDDGAGALLVKHQNQQ 211
Query: 398 SYQXXXXXXXXXXXXXXXXYYHICNMKNHKTKYC-SFNEKCSNYNSNRRRKPRSSH*MPS 574
+ + K K YC K +N + R + + H
Sbjct: 212 PHTSNNKTGKNIKNSS-------SSNKRIKCNYCKKIGHKAANCYAKRNSEQNAGH---- 260
Query: 575 NQTPIEANMVEIKGDQACVFFTNKDFDKDE*FLDSGCNSHMIGNRE 712
+ + TN K E LDSGC SH+ N+E
Sbjct: 261 -------------ATETALLTTNPAKSK-EWCLDSGCTSHLCNNKE 292
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Frame = +1
Query: 751 VKTAGQEILPIRGFEDITLNFGNNK----IILTDALYVEGLRKNLISLYKLLTQKYKMFT 918
+K A + + D+ + NK + L + LYV LR NL+S+ K++ +++ T
Sbjct: 304 LKLANNDTTKVEAKGDVRITALVNKKEKPLRLMNTLYVPNLRTNLLSVAKIVDNNHEI-T 362
Query: 919 FQKENG*RCCQISYNQKIVAEGTEQNGLFVMKPMLTECFLTN---TDISNLWHNRLGHIN 1089
F+++ R + K N L+ ++ + +T+ + WH RLGH+N
Sbjct: 363 FKQD---RAIVRNLQGKTTMIAKRINDLYYLQEKPEQACITSEHERSHTKTWHERLGHLN 419
>emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]
Length = 1220
Score = 47.0 bits (110), Expect(2) = 3e-06
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Frame = +1
Query: 712 VFTNFRNTYDEKFVKTAGQEILPIRGFEDITLNFGNNKIILTDALYVEGLRKNLISLYKL 891
+FT+ + K VK E++ +G I ++ I+T+ LY+ L +NL+S+ ++
Sbjct: 322 IFTSIDRSVQPK-VKLGNGEVVQAKGKGTIAISTKRGTKIVTNVLYIPDLDQNLLSVAQM 380
Query: 892 LTQKYKMFTFQKENG*RCCQISYNQKIVAEGTEQNGLFVMKPMLTE--CFLTNTDISNLW 1065
L Y + KEN C + +K +A+ +F +K L E F D S +W
Sbjct: 381 LRNGYAVSF--KEN--FCFITNVQEKEIAKIKMNGNIFYLKLDLVEGHVFSAKIDESVVW 436
Query: 1066 HNRLGHIN 1089
H GH N
Sbjct: 437 HKSYGHFN 444
Score = 32.0 bits (71), Expect(2) = 3e-06
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = +2
Query: 461 HICNMKNHKTKYCSFNEKCSNYNSNRRRKPRSSH*MPSNQTPIEANMVEIKGDQACVFFT 640
+ CN H KYC R +K +S N + IE N K D +F
Sbjct: 251 NFCNKLCHSEKYC------------RAKKKQSQQQPEKNASVIEEN----KNDDEHLFMA 294
Query: 641 NKDFDKDE*---FLDSGCNSHM 697
++ E +DSGC SHM
Sbjct: 295 SQTLSSHELNTWLIDSGCTSHM 316
>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
Length = 1021
Score = 46.6 bits (109), Expect(2) = 8e-06
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Frame = +1
Query: 715 FTNFRNTYDEKFVKTAGQEILPIRGFEDITLNFGNNKIILTDALYVEGLRKNLISLYKLL 894
F +F ++ + VK + + G ++ L I+T YV L+ NL+S+ +L
Sbjct: 187 FLDFDGSFKDS-VKLGNNSSMVVMGKGNVWLQVNGRVQIITGVFYVPELKNNLLSIGQLQ 245
Query: 895 TQKYKMFTFQKENG*RCCQISYNQK--IVAEGTEQNGLFVM----KPMLTECFLTNT-DI 1053
+ K+ K+ C++ + +K I+ + N +F++ +P+ + CF T T D+
Sbjct: 246 EKGLKILFQSKK-----CKVFHPEKGLIMETKMDFNRMFILLAISQPIASACFNTITEDM 300
Query: 1054 SNLWHNRLGHIN 1089
LWH R GH++
Sbjct: 301 VQLWHCRYGHLS 312
Score = 30.8 bits (68), Expect(2) = 8e-06
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 590 EANMVEIKGDQACVFFT--NKDFDKDE*FLDSGCNSHMIGNREY 715
EAN + + + + + NK ++ FLDSGC +HM G +EY
Sbjct: 143 EANYAQTQEEMLLMSYVDMNKANEEYMWFLDSGCINHMCGKKEY 186