BLASTX nr result

ID: Ephedra26_contig00014752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00014752
         (527 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75712.1| unknown [Picea sitchensis]                             127   2e-27
emb|CBA12007.1| putative auxin response factor 10/16/17, partial...   117   2e-24
gb|ADE77800.1| unknown [Picea sitchensis]                              96   4e-18

>gb|ADE75712.1| unknown [Picea sitchensis]
          Length = 264

 Score =  127 bits (318), Expect = 2e-27
 Identities = 76/173 (43%), Positives = 99/173 (57%), Gaps = 12/173 (6%)
 Frame = +1

Query: 43  VSTELNIGNSYQHEAADMQSSISCLLSVGNSAATQQKADDGWSKNSKAMNGASFLLFGKP 222
           V TELNIGNS Q++ + MQSS S LL+VGNS+  +QK   G S +S    G+SF LFGKP
Sbjct: 5   VCTELNIGNSPQNDGSGMQSSPSSLLTVGNSSQNEQKTSSG-SASSSTPKGSSFFLFGKP 63

Query: 223 IHAGESPKS----NVTTSTVDG--------NFVEGWKKSSSIAGNNDVLQRVQQLMAGKK 366
           IH  +SPKS        S+ DG        N   G   ++S  GN + L+RVQ+L+ G +
Sbjct: 64  IHTAQSPKSYQQHQSGLSSSDGAAFHMFTENGSPGQSSNTSSNGNQEALERVQKLITGGR 123

Query: 367 DINNFSDNSVSWFYNGESLDSTGANSTTTFNWVNDQSSATKLEKDSEESTTED 525
           D    S+N      +GESLD  G     +  W  DQ+S  KLEKD +E+T ED
Sbjct: 124 DGTKLSENYGLRLSHGESLDYAGTKGVRSLQWFKDQASILKLEKDKQENTCED 176


>emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
          Length = 528

 Score =  117 bits (292), Expect = 2e-24
 Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
 Frame = +1

Query: 16  QEQVAATAHVSTELNIGNSYQHEAADMQSSISCLLSVGNSAATQQKADDGWSKNSKAMNG 195
           Q+Q A +  VSTELNIG+  QH+ + +Q ++SCLL +GNS+ ++QK  +G    S  +  
Sbjct: 260 QDQGALSTPVSTELNIGSFSQHDRSSVQDNLSCLLMMGNSSQSEQKTSNG-KAGSSTIKS 318

Query: 196 ASFLLFGKPIHAGESPKSNVTTS------------TVDGNFVEGWKKSSSIAGNNDVLQR 339
           A FLLFGKPIH  +S KS                 TV+     G   +SS   N ++L+R
Sbjct: 319 APFLLFGKPIHTEQSVKSQQKQQSGLSSSEGPGFQTVNDTGSPGITSNSSTDVNPEILER 378

Query: 340 VQQLMAGKKDINNFSDNSVSWFYNGESLDSTGANSTTTFNWVNDQSSATKLEKDSEESTT 519
            Q++M  +  +   + NS    Y+GE+LDS G N   +  W  DQ +   LEK+ E    
Sbjct: 379 AQRVMTDRSGVTKLTGNSDLKLYHGETLDSVGTNGIVSLPWFKDQGAMLSLEKNREGKAL 438

Query: 520 ED 525
           ED
Sbjct: 439 ED 440


>gb|ADE77800.1| unknown [Picea sitchensis]
          Length = 264

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 62/177 (35%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
 Frame = +1

Query: 34  TAHVSTELNIGNSYQHEAADMQSSISCLLSVGNSAATQQKADDGWSKNSKAMNGASFLLF 213
           +  VSTELNIG+  Q E +++ +S+SCLL++GNS+ ++ K        S      SFLLF
Sbjct: 2   STRVSTELNIGSLSQLEKSEVHNSLSCLLTMGNSSQSEHKISS--CSTSSTSKSTSFLLF 59

Query: 214 GKPIHAGESPKSNVT-----TSTVDGNFVE--------GWKKSSSIAGNNDVLQRVQQLM 354
           GKPIH  +SP+S         S+ DG   +        G   +SS   N +V  RVQ+L 
Sbjct: 60  GKPIHTDQSPRSQQQQQQSGVSSADGLGFQSFNDTGSPGLTNNSSTDVNQEVEDRVQKLK 119

Query: 355 AGKKDINNFSDNSVSWFYNGESLDSTGANSTTTFNWVNDQSSATKLEKDSEESTTED 525
             K   +  SDNS     +G SLD+ G N          ++    L+K++ E T+ED
Sbjct: 120 KEKAGGSKISDNSSLTHQHGNSLDAAGTNGVNGLQRFKHETGILSLKKNTHEKTSED 176


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