BLASTX nr result

ID: Ephedra26_contig00014712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00014712
         (789 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              82   2e-13
ref|XP_006382554.1| hypothetical protein POPTR_0005s03260g [Popu...    57   9e-06

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 84/300 (28%), Positives = 125/300 (41%), Gaps = 45/300 (15%)
 Frame = +2

Query: 2    SALVDVHDVMFEIGRKRSQGNRITTIT--ELKALLDTKSEETFHSIRGIAINEVDTKQRE 175
            + ++ VHDV+  +GR++S+G R   I+  + K  LD K EE    I+GI  +E     ++
Sbjct: 594  NGVISVHDVILTLGRRKSEGVRFMFISGSQFKKFLDKKKEEEIQKIKGIWFSE----NKD 649

Query: 176  PLILPAEKLDMMSSSLRTFSTSFIDTSVCQLIPKAIEIQGKVRGRFKSLIYVDTAGVESP 355
             L + A  LD M  SLR              + K  +I+GK    F+SLI+ +      P
Sbjct: 650  LLSISATILDSMHKSLRILR-----------LGKLTKIEGKCSEIFESLIFFEGEVPGLP 698

Query: 356  FDIRSLERLKFLIFSPRKKEDLLEVP---------------------------STLNILW 454
            F ++ L  LK+L + P K   LLE+P                             L IL 
Sbjct: 699  FGVKKLMDLKYLCYQP-KDLKLLEIPHSLRHMEFDGRLHPQVFEISSRDLEQFQNLRILK 757

Query: 455  LYMW-NTEDAGEDLSFQVNGMN-------KDVXXXXXXXXXXXXXXXXRLP--------A 586
            L  +   +   E+L   VNG+        K +                R+          
Sbjct: 758  LTRFAKLKKLSENLGDLVNGLQELTLSYCKSIKELPPSISKLQLLRVLRMDYCSSLMKVP 817

Query: 587  EPLSNLISIVKLHLHDCCNLIELPANLHILANLRCLMLGNCKNLKGLPLKFGELKSLTTL 766
            E L +L S+ +L+   C NL +LP +L  L +LR L L +C+ LK LP     L SL  L
Sbjct: 818  EGLGSLNSLQELNFQGCTNLRKLPNSLGKLFSLRILDLSSCEKLKELPHGIENLTSLVNL 877


>ref|XP_006382554.1| hypothetical protein POPTR_0005s03260g [Populus trichocarpa]
            gi|550337917|gb|ERP60351.1| hypothetical protein
            POPTR_0005s03260g [Populus trichocarpa]
          Length = 1276

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 29/67 (43%), Positives = 38/67 (56%)
 Frame = +2

Query: 587  EPLSNLISIVKLHLHDCCNLIELPANLHILANLRCLMLGNCKNLKGLPLKFGELKSLTTL 766
            + +  L S+  LHL  C  L  LP  +  L +L+CL L +C  L  LP   G LKSL +L
Sbjct: 823  DSIGALKSLKSLHLSGCSGLASLPDTIGALKSLQCLELSDCSGLASLPDSIGALKSLESL 882

Query: 767  LLYGIES 787
            LLYG+ S
Sbjct: 883  LLYGLAS 889


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