BLASTX nr result
ID: Ephedra26_contig00014449
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00014449
(1051 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A... 105 3e-20
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 80 1e-12
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 80 1e-12
gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma c... 76 2e-11
gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus pe... 76 2e-11
gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma c... 74 1e-10
gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma c... 64 8e-08
gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Th... 64 8e-08
gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma c... 64 8e-08
emb|CBI39731.3| unnamed protein product [Vitis vinifera] 64 8e-08
gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma c... 63 2e-07
ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family pr... 62 3e-07
emb|CBI16834.3| unnamed protein product [Vitis vinifera] 62 5e-07
ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cuc... 61 8e-07
ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 61 8e-07
ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212... 61 8e-07
ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212... 61 8e-07
ref|XP_006346135.1| PREDICTED: cleavage and polyadenylation spec... 60 1e-06
ref|XP_002662236.2| PREDICTED: LIM domain-containing protein A [... 60 1e-06
ref|XP_004244046.1| PREDICTED: uncharacterized protein LOC101251... 60 1e-06
>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
gi|548855834|gb|ERN13697.1| hypothetical protein
AMTR_s00049p00146760 [Amborella trichopoda]
Length = 659
Score = 105 bits (262), Expect = 3e-20
Identities = 77/228 (33%), Positives = 92/228 (40%), Gaps = 6/228 (2%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP +GTVGLPGVAPHVNPAFFGR
Sbjct: 433 QGMMGSGFDPTYGAHLGRGSGYGGFSGPHFPGMLPSFSP-MGTVGLPGVAPHVNPAFFGR 491
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWN---NEEQHGRRMREXXXXXXXXXXXXXXX 527
GV+ANGM MM E+HGRR RE
Sbjct: 492 GVSANGMGMMGSGAMDGHHGGMWGDSSMGGGVGWGNEEHGRRTRESSYGDDGASDYGYGD 551
Query: 526 MGHDR-AGRSSGTRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGYS--XXXX 356
GH+R GRS+ R+K +K+GYS
Sbjct: 552 GGHERGGGRSNPGREKDRGSERDWSSGPERRHRDDRDSDWDRDPRYKDEKDGYSDHRQRE 611
Query: 355 XXXXXXXXXXXXEKPSKGRSKSRMMDDDDQRPRSKDVEYNKRRRMPSD 212
S+ RSKSRMM ++DQR RSKDV+Y KRRR+PS+
Sbjct: 612 RDWDNEDDWDRGRTSSRSRSKSRMMQEEDQRSRSKDVDYGKRRRVPSE 659
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 80.5 bits (197), Expect = 1e-12
Identities = 68/229 (29%), Positives = 83/229 (36%), Gaps = 7/229 (3%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V +GLPGVAPHVNPAFFGR
Sbjct: 424 QGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQA----VNPMGLPGVAPHVNPAFFGR 479
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMRE-XXXXXXXXXXXXXXXMG 521
G+AANGM MM E+HGRR RE +
Sbjct: 480 GMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVS 539
Query: 520 HDRAGRSSG-TRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKE---GYS--XXX 359
HD+ RSS +R+K +E GY
Sbjct: 540 HDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQK 599
Query: 358 XXXXXXXXXXXXXEKPSKGRSKSRMMDDDDQRPRSKDVEYNKRRRMPSD 212
+ S+ RSKSR ++D R RS+D Y KRRR PS+
Sbjct: 600 ERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 80.5 bits (197), Expect = 1e-12
Identities = 67/229 (29%), Positives = 88/229 (38%), Gaps = 7/229 (3%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V T+GL GVAPHVNPAFFGR
Sbjct: 423 QGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPA----VNTMGLAGVAPHVNPAFFGR 478
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMRE-XXXXXXXXXXXXXXXMG 521
G+AANGM MM E+HGRR RE +
Sbjct: 479 GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 538
Query: 520 HDRAGRS-SGTRDK---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGY--SXXX 359
H++ GRS + +R+K +K+GY
Sbjct: 539 HEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQR 598
Query: 358 XXXXXXXXXXXXXEKPSKGRSKSRMMDDDDQRPRSKDVEYNKRRRMPSD 212
+ S+ RS+SR + D+D R RS+D +Y KRRR+PS+
Sbjct: 599 ERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647
>gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708838|gb|EOY00735.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 653
Score = 76.3 bits (186), Expect = 2e-11
Identities = 63/231 (27%), Positives = 80/231 (34%), Gaps = 9/231 (3%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V T+GL GVAPHVNPAFFGR
Sbjct: 427 QGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPA----VNTLGLAGVAPHVNPAFFGR 482
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMREXXXXXXXXXXXXXXXMGH 518
G+A NGM MM ++HGRR RE +
Sbjct: 483 GMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 542
Query: 517 DRAGRSSG-------TRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGYSXXX 359
GRSSG D+ +K+ Y
Sbjct: 543 HEKGRSSGASREKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHR 602
Query: 358 XXXXXXXXXXXXXEKPSKGRS--KSRMMDDDDQRPRSKDVEYNKRRRMPSD 212
S RS +S M ++ +R RS+DV+Y KRRR+PS+
Sbjct: 603 HRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653
>gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 76.3 bits (186), Expect = 2e-11
Identities = 64/233 (27%), Positives = 83/233 (35%), Gaps = 11/233 (4%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V T+GL GVAPHVNPAFFGR
Sbjct: 402 QGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPA----VNTMGLAGVAPHVNPAFFGR 457
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMRE-XXXXXXXXXXXXXXXMG 521
G+A NGM MM ++HGRR RE
Sbjct: 458 GMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAN 517
Query: 520 HDRAGRSS--------GTRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGYSX 365
H++ GRS+ G+ +K+ Y
Sbjct: 518 HEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRD 577
Query: 364 XXXXXXXXXXXXXXXEKPS--KGRSKSRMMDDDDQRPRSKDVEYNKRRRMPSD 212
S + RS+S+ M +DD R RS+DV+Y KRRR+PS+
Sbjct: 578 HRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630
>gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708840|gb|EOY00737.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708841|gb|EOY00738.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 652
Score = 73.9 bits (180), Expect = 1e-10
Identities = 61/231 (26%), Positives = 80/231 (34%), Gaps = 9/231 (3%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V T+GL GVAPHVNPAFFGR
Sbjct: 426 QGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPA----VNTMGLAGVAPHVNPAFFGR 481
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMREXXXXXXXXXXXXXXXMGH 518
G+A NGM MM ++HGRR RE +
Sbjct: 482 GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541
Query: 517 DRAGRSSG-------TRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGYSXXX 359
GRSSG ++ +K+ Y
Sbjct: 542 HEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHR 601
Query: 358 XXXXXXXXXXXXXEKPSKGRS--KSRMMDDDDQRPRSKDVEYNKRRRMPSD 212
S RS +S M +++ R RS+DV+Y K+RR+PS+
Sbjct: 602 HRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652
>gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 602
Score = 64.3 bits (155), Expect = 8e-08
Identities = 45/133 (33%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V T+GL GVAPHVNPAFFGR
Sbjct: 426 QGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPA----VNTMGLAGVAPHVNPAFFGR 481
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMREXXXXXXXXXXXXXXXMGH 518
G+A NGM MM ++HGRR RE +
Sbjct: 482 GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541
Query: 517 DRAGRSSG-TRDK 482
GRSSG +R+K
Sbjct: 542 HEKGRSSGASREK 554
>gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
Length = 656
Score = 64.3 bits (155), Expect = 8e-08
Identities = 45/133 (33%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V T+GL GVAPHVNPAFFGR
Sbjct: 426 QGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPA----VNTMGLAGVAPHVNPAFFGR 481
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMREXXXXXXXXXXXXXXXMGH 518
G+A NGM MM ++HGRR RE +
Sbjct: 482 GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541
Query: 517 DRAGRSSG-TRDK 482
GRSSG +R+K
Sbjct: 542 HEKGRSSGASREK 554
>gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 697
Score = 64.3 bits (155), Expect = 8e-08
Identities = 45/133 (33%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V T+GL GVAPHVNPAFFGR
Sbjct: 426 QGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPA----VNTMGLAGVAPHVNPAFFGR 481
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMREXXXXXXXXXXXXXXXMGH 518
G+A NGM MM ++HGRR RE +
Sbjct: 482 GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541
Query: 517 DRAGRSSG-TRDK 482
GRSSG +R+K
Sbjct: 542 HEKGRSSGASREK 554
>emb|CBI39731.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 64.3 bits (155), Expect = 8e-08
Identities = 49/194 (25%), Positives = 71/194 (36%), Gaps = 12/194 (6%)
Frame = -1
Query: 757 VGTVGLPGVAPHVNPAFFGRGVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRM 578
VG VGLPGVAPHVNPAFFGRG+ NGM MMP ++HG R
Sbjct: 404 VGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPATSVEGPNMGMWSDPNMAGWAGDEHGGRA 463
Query: 577 REXXXXXXXXXXXXXXXMGHDRAGRSSGTR----------DKXXXXXXXXXXXXXXXXXX 428
E + HDR G + + +K
Sbjct: 464 GESSYGEEAGSDHQYGEVSHDRGGWQNTMKEKDRGSERDWEKDLVHENDWPERKHREDRD 523
Query: 427 XXXXXXXXXXXXXXDKEGYSXXXXXXXXXXXXXXXXEKPSKGRSKSR--MMDDDDQRPRS 254
++ Y+ ++ R+ S+ + +++QR RS
Sbjct: 524 IGRDRDRERDREREHRDRYADHHRYRDRESEHDDEWDRGRSSRTHSKSRLSQEEEQRSRS 583
Query: 253 KDVEYNKRRRMPSD 212
+D +Y KRRR+ S+
Sbjct: 584 RDADYGKRRRLTSE 597
>gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508720133|gb|EOY12030.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508720134|gb|EOY12031.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 709
Score = 62.8 bits (151), Expect = 2e-07
Identities = 44/135 (32%), Positives = 52/135 (38%), Gaps = 3/135 (2%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--VGTVGLPGVAPHVNPAFF 704
Q +MGQGFDP VG VGLPGVAPHVNPAFF
Sbjct: 430 QAMMGQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 489
Query: 703 GRGVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQH-GRRMREXXXXXXXXXXXXXXX 527
GRG+ NGM MMP ++H G R E
Sbjct: 490 GRGMPMNGMGMMPTSGVDGPNMGMWSDPNMGGWGGDEHGGGRAGESSYGEEAASDHQYGE 549
Query: 526 MGHDRAGRSSGTRDK 482
+ HDR G + T++K
Sbjct: 550 VSHDRGGWQNPTKEK 564
>ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS54-like
[Cicer arietinum]
Length = 710
Score = 62.4 bits (150), Expect = 3e-07
Identities = 39/93 (41%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -1
Query: 757 VGTVGLPGVAPHVNPAFFGRGVAANGMAMMP-XXXXXXXXXXXXXXXXXXWNNEEQHGRR 581
VG VGLPGVAPHVNPAFFGRG+ NGM MMP W EE G R
Sbjct: 472 VGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPTAGMDGPNMGMWPDPNMGGWGGEEPGGGR 531
Query: 580 MREXXXXXXXXXXXXXXXMGHDRAGRSSGTRDK 482
E + HDR G + RDK
Sbjct: 532 AGESSYGEEAASDQQYGEVSHDRPGWQNAMRDK 564
>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 61.6 bits (148), Expect = 5e-07
Identities = 46/134 (34%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGTVGLPGVAPHVNPAFFGR 698
QG+MG GFDP V T+GL GVAPHVNPAFFGR
Sbjct: 298 QGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPA----VNTMGLAGVAPHVNPAFFGR 353
Query: 697 GVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMRE-XXXXXXXXXXXXXXXMG 521
G+AANGM MM E+HGRR RE +
Sbjct: 354 GMAANGMGMM----------------------GEEHGRRTRESSYGGDDGASDYGYGEVN 391
Query: 520 HDRAGRS-SGTRDK 482
H++ GRS + +R+K
Sbjct: 392 HEKVGRSNTASREK 405
>ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cucumis sativus]
Length = 697
Score = 60.8 bits (146), Expect = 8e-07
Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--VGTVGLPGVAPHVNPAFF 704
Q +MGQGFDP VG VGLPGVAPHVNPAFF
Sbjct: 410 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 469
Query: 703 GRGVAANGMAMMP 665
GRG+ NGM MMP
Sbjct: 470 GRGMPMNGMGMMP 482
>ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212739
[Cucumis sativus]
Length = 724
Score = 60.8 bits (146), Expect = 8e-07
Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--VGTVGLPGVAPHVNPAFF 704
Q +MGQGFDP VG VGLPGVAPHVNPAFF
Sbjct: 435 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 494
Query: 703 GRGVAANGMAMMP 665
GRG+ NGM MMP
Sbjct: 495 GRGMPMNGMGMMP 507
>ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212980 [Cucumis sativus]
Length = 697
Score = 60.8 bits (146), Expect = 8e-07
Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--VGTVGLPGVAPHVNPAFF 704
Q +MGQGFDP VG VGLPGVAPHVNPAFF
Sbjct: 410 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 469
Query: 703 GRGVAANGMAMMP 665
GRG+ NGM MMP
Sbjct: 470 GRGMPMNGMGMMP 482
>ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212739 [Cucumis sativus]
Length = 699
Score = 60.8 bits (146), Expect = 8e-07
Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--VGTVGLPGVAPHVNPAFF 704
Q +MGQGFDP VG VGLPGVAPHVNPAFF
Sbjct: 410 QSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFF 469
Query: 703 GRGVAANGMAMMP 665
GRG+ NGM MMP
Sbjct: 470 GRGMPMNGMGMMP 482
>ref|XP_006346135.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform X1 [Solanum tuberosum]
gi|565358644|ref|XP_006346136.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
isoform X2 [Solanum tuberosum]
gi|565358646|ref|XP_006346137.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
isoform X3 [Solanum tuberosum]
Length = 695
Score = 60.5 bits (145), Expect = 1e-06
Identities = 41/134 (30%), Positives = 49/134 (36%), Gaps = 2/134 (1%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--VGTVGLPGVAPHVNPAFF 704
Q +MGQGFDP VG VG+PGVAPHVNPAFF
Sbjct: 423 QTMMGQGFDPAFGGPMGRMGGYGGFPGGPAPPFPGMLSSFPPVGGVGMPGVAPHVNPAFF 482
Query: 703 GRGVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMREXXXXXXXXXXXXXXXM 524
GRG+ NGM MMP ++HG R E
Sbjct: 483 GRGMPMNGMGMMPGAGMEGPNMGMWSEPNAGGWAGDEHGGRAGESSYAEEAGSDHQYGET 542
Query: 523 GHDRAGRSSGTRDK 482
HDR + ++K
Sbjct: 543 THDRGAWPNNVKEK 556
>ref|XP_002662236.2| PREDICTED: LIM domain-containing protein A [Danio rerio]
Length = 1354
Score = 60.5 bits (145), Expect = 1e-06
Identities = 72/291 (24%), Positives = 103/291 (35%), Gaps = 17/291 (5%)
Frame = +1
Query: 208 HDQKASSSVCYTPHPWTAAADHHHPSFVTYSVP*KASPYPNPPHYPSRDLSACLNNPPC- 384
H + S S + HP + HHH T+ +P+ H+ S +S ++ P
Sbjct: 522 HHRSHSGSHHHHAHP---DSHHHH----THPESHHNHTHPDSDHHHSHPVSQLHHSHPDS 574
Query: 385 -RPCTCHDANPRHGHRDAFDQKNHPSLSRSHLYLYPSSR*ISQHGHVPCHCNHNQSSYHH 561
T D++ H H D+ + P H + +P S H H H +H S+ HH
Sbjct: 575 HHAHTLPDSHHHHTHPDSDHHHSRPD--SQHHHSHPDSH--HHHSHSDSHHHHTHSNTHH 630
Query: 562 RSWTLSSSYHAALHYSNHLLPYC------------CHPTFVRPCLH*A-SWPCH*PQHLC 702
S +H S+H P+ H + P H S+P HL
Sbjct: 631 HHSHPDSDHHHFYPDSHH--PHTHPDSHDHHSYPDSHHSHTHPDSHDHHSYP---DSHLS 685
Query: 703 QKMPDSHEERRQVDQQSQQEEKAASYQEKVHVTRSLHNHHHGPYEHHKQDQIPDP*APED 882
PDSH+ D Q + + H H+HH P HH PD
Sbjct: 686 HTHPDSHDHHTHPDSDHHQSHSDSQHH---HTHPDSHHHHSHPDSHHHHSH-PD------ 735
Query: 883 ASNHPGELPWEDQANLVHKD--HHHSHRLPYSFLPYLFLSPGHPVLYSRHH 1029
S+H P + + H D HHHSH + HP S HH
Sbjct: 736 -SHHHHSHP-DSYHHHSHPDSHHHHSHSDSHQ----------HPSPSSHHH 774
>ref|XP_004244046.1| PREDICTED: uncharacterized protein LOC101251795 [Solanum
lycopersicum]
Length = 695
Score = 60.5 bits (145), Expect = 1e-06
Identities = 41/134 (30%), Positives = 49/134 (36%), Gaps = 2/134 (1%)
Frame = -1
Query: 877 QGLMGQGFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--VGTVGLPGVAPHVNPAFF 704
Q +MGQGFDP VG VG+PGVAPHVNPAFF
Sbjct: 423 QTMMGQGFDPAFGGPMGRMGGYGGFPGGPAPPFPGMLSSFPPVGGVGMPGVAPHVNPAFF 482
Query: 703 GRGVAANGMAMMPXXXXXXXXXXXXXXXXXXWNNEEQHGRRMREXXXXXXXXXXXXXXXM 524
GRG+ NGM MMP ++HG R E
Sbjct: 483 GRGMPMNGMGMMPGAGMEGPNMGMWSEPNAGGWAGDEHGGRAGESSYAEEAGSDHQYGET 542
Query: 523 GHDRAGRSSGTRDK 482
HDR + ++K
Sbjct: 543 THDRGAWPNNVKEK 556