BLASTX nr result
ID: Ephedra26_contig00014347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00014347
(621 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26627.1| unknown [Picea sitchensis] 64 3e-08
gb|ADE76674.1| unknown [Picea sitchensis] 62 1e-07
gb|ADE77447.1| unknown [Picea sitchensis] 61 3e-07
gb|AAF80646.1|AC012190_2 Contains similarity to F28O16.19 a puta... 59 1e-06
ref|NP_173539.1| transcription termination factor family protein... 59 1e-06
ref|XP_006447114.1| hypothetical protein CICLE_v10015532mg [Citr... 58 2e-06
ref|XP_002511212.1| conserved hypothetical protein [Ricinus comm... 58 2e-06
ref|XP_004236728.1| PREDICTED: uncharacterized protein LOC101255... 50 4e-06
ref|XP_006432914.1| hypothetical protein CICLE_v10003730mg [Citr... 57 5e-06
ref|XP_002893155.1| hypothetical protein ARALYDRAFT_313019 [Arab... 56 7e-06
ref|XP_006346717.1| PREDICTED: uncharacterized protein LOC102579... 49 1e-05
>gb|ABK26627.1| unknown [Picea sitchensis]
Length = 282
Score = 64.3 bits (155), Expect = 3e-08
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +2
Query: 350 AQDAVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLSR 529
AQ AV+ R+ GFT Q+R TI PS+ + AD L+PK+E +K++G + D G+VLS
Sbjct: 98 AQQAVQFLRDSGFTEHQVRKTITSNPSILTFNADRRLKPKIEFMKTLGLTAQDFGNVLSY 157
Query: 530 APRVLSL---KDVDKKIDRCRSYFNGNANL 610
R+L+ K + I ++ F AN+
Sbjct: 158 GFRLLTCSLEKTLRTNIQYLQNLFGSEANV 187
>gb|ADE76674.1| unknown [Picea sitchensis]
Length = 335
Score = 62.0 bits (149), Expect = 1e-07
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +2
Query: 350 AQDAVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLSR 529
AQ AV+L R+ GFT Q+ I + PS+ + AD L+PK+E +K++G + +++G+V +
Sbjct: 96 AQQAVQLLRDSGFTEDQVCKIITRNPSILTYNADRQLKPKIEFMKTLGLTAHEIGNVTCQ 155
Query: 530 APRVLS---LKDVDKKIDRCRSYFNGNANLFK 616
PR+LS K V I ++ F A++ K
Sbjct: 156 GPRLLSHSIEKTVQPNILYLQNLFGSEADVSK 187
>gb|ADE77447.1| unknown [Picea sitchensis]
Length = 329
Score = 60.8 bits (146), Expect = 3e-07
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +2
Query: 350 AQDAVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLSR 529
A++ VKL R+ G T Q+ I++ P+V L+ D L+PK+EL K+ G + DL +++S+
Sbjct: 90 AREVVKLLRDSGCTEEQVSKIIIEHPTVLCLKTDRQLKPKIELFKTSGITGKDLVNLISK 149
Query: 530 APRVLSL---KDVDKKIDRCRSYFNGNANLFKA 619
PRVL K + I +S + A++ KA
Sbjct: 150 FPRVLGSNLDKTLKPNIQYLQSMWESKASVSKA 182
>gb|AAF80646.1|AC012190_2 Contains similarity to F28O16.19 a putative translation initiation
factor IF-2 gi|6143896 from Arabidopsis thaliana
gb|AC010718. It is a member of Elongation factor Tu
family. ESTs gb|AI994592 and gb|T20793 come from thias
gene [Arabidopsis thaliana]
Length = 1552
Score = 58.5 bits (140), Expect = 1e-06
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +2
Query: 347 RAQDAVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLS 526
+ + LF+++GFTN QI S I P V SL +D + PKL SIGFS +D ++S
Sbjct: 1249 KPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMIS 1308
Query: 527 RAPRVLS 547
+P++LS
Sbjct: 1309 SSPKMLS 1315
>ref|NP_173539.1| transcription termination factor family protein [Arabidopsis
thaliana] gi|332191949|gb|AEE30070.1| transcription
termination factor family protein [Arabidopsis thaliana]
Length = 390
Score = 58.5 bits (140), Expect = 1e-06
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +2
Query: 347 RAQDAVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLS 526
+ + LF+++GFTN QI S I P V SL +D + PKL SIGFS +D ++S
Sbjct: 87 KPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMIS 146
Query: 527 RAPRVLS 547
+P++LS
Sbjct: 147 SSPKMLS 153
>ref|XP_006447114.1| hypothetical protein CICLE_v10015532mg [Citrus clementina]
gi|568831542|ref|XP_006470021.1| PREDICTED:
uncharacterized protein LOC102622219 [Citrus sinensis]
gi|557549725|gb|ESR60354.1| hypothetical protein
CICLE_v10015532mg [Citrus clementina]
Length = 392
Score = 57.8 bits (138), Expect = 2e-06
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Frame = +2
Query: 287 FLNHSCHLL*KIIQTLNPLMRAQD------AVKLFREYGFTNAQIRSTIVKCPSVFSLRA 448
FL HSC L + +++ L++ QD +++L GFT QI + I K P + S
Sbjct: 49 FLTHSCGLSLEKAISVSKLVKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILSHDP 108
Query: 449 DDNLRPKLELIKSIGFSNNDLGHVLSRAPRVLSL---KDVDKKIDRCRSYFNGNANLFKA 619
+ L+PK+E ++S+G S DL +L P +LS + D + F N NL A
Sbjct: 109 EKVLKPKIEYLESLGISGPDLAKILCPYPELLSRSLENHIIPTFDFLKGVFQANGNLVYA 168
>ref|XP_002511212.1| conserved hypothetical protein [Ricinus communis]
gi|223550327|gb|EEF51814.1| conserved hypothetical
protein [Ricinus communis]
Length = 423
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +2
Query: 350 AQDAVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLSR 529
A+ V+ FRE GF++ QI +K P ++ RA N +PKLE KS+GFS D+ +LS
Sbjct: 148 AKTVVEFFRENGFSDKQITILTMKRPILYLCRAHKNFKPKLEFFKSLGFSELDIAQILSA 207
Query: 530 APRVL 544
P +L
Sbjct: 208 EPYIL 212
>ref|XP_004236728.1| PREDICTED: uncharacterized protein LOC101255083 [Solanum
lycopersicum]
Length = 392
Score = 49.7 bits (117), Expect(2) = 4e-06
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 359 AVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLSRAPR 538
AV F+ GFT+A I+S + P + + L+PK++L++ +G + +DLG +LS
Sbjct: 85 AVHFFKSVGFTDAHIQSAVCTIPQILLADVEKILKPKIQLLQELGITGSDLGRLLS-TKT 143
Query: 539 VLSLKDVDK 565
VL + +DK
Sbjct: 144 VLLTRSLDK 152
Score = 26.9 bits (58), Expect(2) = 4e-06
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 145 SSFHCYDNLISFSAQANPIDEKSGPNQIEGDGSDSSNMSNFLVKTLGFSQSQLSSVMKNH 324
SSFH IS S + + +KS N ++ + N+L+ TLGF + + ++
Sbjct: 23 SSFH-----ISLSTLSQVVTKKSAQNA----NQENPVLLNYLINTLGFPKPKALTISGRL 73
Query: 325 SDLKSTHE 348
S +KS +
Sbjct: 74 SWVKSVEK 81
>ref|XP_006432914.1| hypothetical protein CICLE_v10003730mg [Citrus clementina]
gi|557535036|gb|ESR46154.1| hypothetical protein
CICLE_v10003730mg [Citrus clementina]
Length = 400
Score = 56.6 bits (135), Expect = 5e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +2
Query: 350 AQDAVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLSR 529
A ++L R +GFTN QI + CP + +L + NL PK+E SIG ++DL ++S
Sbjct: 85 ADSVLRLLRNHGFTNLQISKVVRVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISS 144
Query: 530 APRVLSL 550
P +L++
Sbjct: 145 TPHLLAV 151
>ref|XP_002893155.1| hypothetical protein ARALYDRAFT_313019 [Arabidopsis lyrata subsp.
lyrata] gi|297338997|gb|EFH69414.1| hypothetical protein
ARALYDRAFT_313019 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 56.2 bits (134), Expect = 7e-06
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +2
Query: 347 RAQDAVKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLS 526
+ + LF+++GFT QI + I P V SL DD + PKL SIGFS +D ++S
Sbjct: 1126 KPDSVLALFKDHGFTTDQITNVIKSFPRVLSLSPDDVILPKLMFFSSIGFSTSDTAKMIS 1185
Query: 527 RAPRVLSLKDVDKKIDRC 580
P++LS ++K++ C
Sbjct: 1186 SCPKMLS-HSLNKRMIPC 1202
>ref|XP_006346717.1| PREDICTED: uncharacterized protein LOC102579849 [Solanum tuberosum]
Length = 396
Score = 48.9 bits (115), Expect(2) = 1e-05
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = +2
Query: 362 VKLFREYGFTNAQIRSTIVKCPSVFSLRADDNLRPKLELIKSIGFSNNDLGHVLSRAPRV 541
V F+ GFT+AQI+S + P + + L+PK++L++ +G + +DLG +LS +
Sbjct: 90 VHFFKSVGFTDAQIQSAVGTVPQILLADVEKILKPKIQLLQELGITGSDLGRLLS-TKAI 148
Query: 542 LSLKDVDK 565
L + +DK
Sbjct: 149 LLTRSLDK 156
Score = 26.6 bits (57), Expect(2) = 1e-05
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 145 SSFHCYDNLISFSAQANPIDEKSGPNQIEGDGSDSSNMSNFLVKTLGFSQSQLSSVMKNH 324
SSFH IS S+ + + +KS N ++ + N+L+ TLGF + + ++
Sbjct: 27 SSFH-----ISLSSLSQVVTKKSAQNA----NQENPVLLNYLINTLGFPKPKAVTISDRL 77
Query: 325 SDLKSTHE 348
S ++S +
Sbjct: 78 SWVRSVEK 85