BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00014298
         (1969 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   413   e-112
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   406   e-110
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]               406   e-110
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   405   e-110
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               399   e-108
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   397   e-107
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]   395   e-107
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  392   e-106
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi...   392   e-106
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   390   e-106
gb|AFB73912.1| polyprotein [Citrus sinensis]                          390   e-105
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              390   e-105
gb|AFB73911.1| polyprotein [Citrus sinensis]                          389   e-105
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              387   e-105
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              387   e-104
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]           384   e-104
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     382   e-103
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   382   e-103
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   382   e-103
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   380   e-102

>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  413 bits (1061), Expect = e-112
 Identities = 242/651 (37%), Positives = 364/651 (55%), Gaps = 11/651 (1%)
 Frame = -1

Query: 1924 VMKPLKTECYLT---NTEILNLWHNRLGHIINVYLEKIETT--VSHGLKNSISTSKCNNC 1760
            + K  + E Y+      E  +LWH R GH+    +E ++T   V    K  +    C  C
Sbjct: 435  IWKKSREETYMAFEEKEEQTDLWHKRFGHVNYDKIETMQTLKIVEKLPKFEVIKGICAAC 494

Query: 1759 IMAKLHRKPFKNRTRT-TSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLI 1583
             M K  R+ F  ++++ T++ LE+IHSD+ GP+   + N  RY L F DD+S+M W Y +
Sbjct: 495  EMGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFL 554

Query: 1582 K*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTP 1403
            K KSEV   F  F+  V+ +   +I  LRTD G EF S EF + C+  GI  E T PY+P
Sbjct: 555  KNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSP 614

Query: 1402 QQNRVV*RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQK-TPFEMW 1226
            QQN V  R+N+ L+EM R ++   ++S K+W EA  T+T++ N +P K + +  TP E+W
Sbjct: 615  QQNGVAERRNRTLVEMARSMIEEKKLSNKFWAEAIATSTYLQNRLPSKSLEKGVTPMEIW 674

Query: 1225 YNLKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIV 1046
               KPS+ HL+VFGC+C+ HIP E R KLD KAK+GI VGYS  SKGY++     +K+ V
Sbjct: 675  SGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNESKGYRVFLLNEEKIEV 734

Query: 1045 SRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEI 866
            S+DV F E          ++  SH           E  E++ +L   + NS      +++
Sbjct: 735  SKDVTFDE----------KKTWSHD----------EKGERKAILSLVKINSQEQGGGNDL 774

Query: 865  PSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLT 686
             +      H  Q     N+LH      +N  +  +         E V    FR+ +  + 
Sbjct: 775  NA------HIDQVSNAFNQLHISSRGVQNSHEEGE---------ESVGPRGFRSINNLMD 819

Query: 685  RVRKNEGDTNL--ICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKL 512
            +  + EG+  +  +C +      E P+ + EA+ +  W  AM  E++M+   KTWE+   
Sbjct: 820  QTNEVEGEALIHEMCLMMA----EEPQALEEAMKDEKWIEAMREELRMIEKNKTWEVVAR 875

Query: 511  PKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLL 332
            PKDK VI  +W++ +K   +GE  K KAR+VA+GF Q+ G+DY +TFAP +   TIR ++
Sbjct: 876  PKDKNVISVKWIFRLKTDASGEAIKRKARLVARGFTQEYGVDYLETFAPVSRYDTIRTIM 935

Query: 331  KLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSENLD--LVCKLKKSLYGLKQAPR 158
             +A  +GW +F +DVKSAFL+ +LEEEVY+ QPPG+ E  +   V KL K+LYGLKQAPR
Sbjct: 936  AIAAQQGWKLFQMDVKSAFLNGDLEEEVYIEQPPGFIEEKEEGKVLKLHKALYGLKQAPR 995

Query: 157  TWYKRLTSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGED 5
             WY R+  +    GF+ S  D   +Y++   K   ++++ +VDDII+TG +
Sbjct: 996  AWYGRIDGYFIKNGFERSINDA-AFYVKKTSK-EILVVSLYVDDIIVTGSN 1044


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  406 bits (1044), Expect = e-110
 Identities = 232/640 (36%), Positives = 358/640 (55%), Gaps = 7/640 (1%)
 Frame = -1

Query: 1909 KTECYLTNTEILNLWHNRLGHIINVYLEKI-ETTVSHGLKN---SISTSKCNNCIMAKLH 1742
            +T C     +  N+WH R GH+ +  L  + E  +  GL         + C+ C+  K  
Sbjct: 421  ETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQI 480

Query: 1741 RKPF-KNRTRTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEV 1565
            R+   K     +++ L+++H+D+ GPI P + + KRYIL F DD+S+  W YL+  KSE 
Sbjct: 481  RESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSET 540

Query: 1564 FEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV 1385
            F+ F +F+ +V+ E   K+ CLR+D G E+ S EF ++C+  GI+R+ T  YTPQQN V 
Sbjct: 541  FQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVA 600

Query: 1384 *RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSI 1205
             RKN+ ++ M RC+L    +  K+W EA + A +ILN  P K +   TP E W + KPS+
Sbjct: 601  ERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSV 660

Query: 1204 SHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFI 1025
             HLR+FG L +  +P + R KLD K+ + +M G S+ SK Y++ D  T K+++SRDV+F 
Sbjct: 661  EHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFD 720

Query: 1024 EDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDL 845
            E+      +K  E     +   +D S+ E   +E            PE N     DQ + 
Sbjct: 721  EERGWEWEDKSLE-----EELVWDNSDHEPAGEEG-----------PEINHNGQQDQ-EE 763

Query: 844  SHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEG 665
            +   +E V +      P      V+ ++ P+W K+        V  N    +T+  ++E 
Sbjct: 764  TEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDY-------VVGNARVLITQDEEDE- 815

Query: 664  DTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDKEVIGC 485
                   ++    P+ P    EA     W+ AM+ EI  + +  TWEL +LP++ +VIG 
Sbjct: 816  ------VLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGL 869

Query: 484  RWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWD 305
            +W++  K    GE+DK+KAR+VAKG+HQ+ G+D+ + FAP A   TIR++L LA  KGW 
Sbjct: 870  KWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWS 929

Query: 304  VFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQAPRTWYKRLTSF 131
            VF LDVKSAFLH +L+E+V++ QP G+   E    V KLKK+LYGLKQAPR WY R+  F
Sbjct: 930  VFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEF 989

Query: 130  LKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
               +GF+    +  L+  +  ++   ++++ +VDD+I TG
Sbjct: 990  FGKEGFEKCYCEHTLFVKK--ERSDFLVVSVYVDDLIYTG 1027


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score =  406 bits (1044), Expect = e-110
 Identities = 232/640 (36%), Positives = 358/640 (55%), Gaps = 7/640 (1%)
 Frame = -1

Query: 1909 KTECYLTNTEILNLWHNRLGHIINVYLEKI-ETTVSHGLKN---SISTSKCNNCIMAKLH 1742
            +T C     +  N+WH R GH+ +  L  + E  +  GL         + C+ C+  K  
Sbjct: 326  ETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQI 385

Query: 1741 RKPF-KNRTRTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEV 1565
            R+   K     +++ L+++H+D+ GPI P + + KRYIL F DD+S+  W YL+  KSE 
Sbjct: 386  RESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSET 445

Query: 1564 FEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV 1385
            F+ F +F+ +V+ E   K+ CLR+D G E+ S EF ++C+  GI+R+ T  YTPQQN V 
Sbjct: 446  FQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVA 505

Query: 1384 *RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSI 1205
             RKN+ ++ M RC+L    +  K+W EA + A +ILN  P K +   TP E W + KPS+
Sbjct: 506  ERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSV 565

Query: 1204 SHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFI 1025
             HLR+FG L +  +P + R KLD K+ + +M G S+ SK Y++ D  T K+++SRDV+F 
Sbjct: 566  EHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFD 625

Query: 1024 EDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDL 845
            E+      +K  E     +   +D S+ E   +E            PE N     DQ + 
Sbjct: 626  EERGWEWEDKSLE-----EELVWDNSDHEPAGEEG-----------PEINHNGQQDQ-EE 668

Query: 844  SHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEG 665
            +   +E V +      P      V+ ++ P+W K+        V  N    +T+  ++E 
Sbjct: 669  TEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDY-------VVGNARVLITQDEEDE- 720

Query: 664  DTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDKEVIGC 485
                   ++    P+ P    EA     W+ AM+ EI  + +  TWEL +LP++ +VIG 
Sbjct: 721  ------VLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGL 774

Query: 484  RWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWD 305
            +W++  K    GE+DK+KAR+VAKG+HQ+ G+D+ + FAP A   TIR++L LA  KGW 
Sbjct: 775  KWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWS 834

Query: 304  VFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQAPRTWYKRLTSF 131
            VF LDVKSAFLH +L+E+V++ QP G+   E    V KLKK+LYGLKQAPR WY R+  F
Sbjct: 835  VFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEF 894

Query: 130  LKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
               +GF+    +  L+  +  ++   ++++ +VDD+I TG
Sbjct: 895  FGKEGFEKCYCEHTLFVKK--ERSDFLVVSVYVDDLIYTG 932


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  405 bits (1040), Expect = e-110
 Identities = 232/640 (36%), Positives = 357/640 (55%), Gaps = 7/640 (1%)
 Frame = -1

Query: 1909 KTECYLTNTEILNLWHNRLGHIINVYLEKI-ETTVSHGLKN---SISTSKCNNCIMAKLH 1742
            +T C     +  N+WH R GH+ +  L  + E  +  GL         + C+ C+  K  
Sbjct: 421  ETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQI 480

Query: 1741 RKPF-KNRTRTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEV 1565
            R+   K     +++ L+++H+D+ GPI P + + KRYIL F DD+S+  W YL+  KSE 
Sbjct: 481  RESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSET 540

Query: 1564 FEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV 1385
            F+ F +F+ +V+ E   K+ CLR+D G E+ S EF ++C+  GI+R+ T  YTPQQN V 
Sbjct: 541  FQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVA 600

Query: 1384 *RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSI 1205
             RKN+ ++ M RC+L    +  K+W EA + A +ILN  P K +   TP E W + KPS+
Sbjct: 601  ERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSV 660

Query: 1204 SHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFI 1025
             HLR+FG L +  +P + R KLD K+ + +M G S+ SK Y++ D  T K+++SRDV+F 
Sbjct: 661  EHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFD 720

Query: 1024 EDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDL 845
            E+      +K  E     +   +D S+ E   +E            PE N     DQ + 
Sbjct: 721  EERGWEWEDKSLE-----EELVWDNSDHEPAGEEG-----------PEINHNGQQDQ-EE 763

Query: 844  SHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEG 665
            +   +E V +      P      V+ ++ P+W K+        V  N    +T+  ++E 
Sbjct: 764  TEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDY-------VVGNARVLITQDEEDE- 815

Query: 664  DTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDKEVIGC 485
                   ++    P  P    EA     W+ AM+ EI  + +  TWEL +LP++ +VIG 
Sbjct: 816  ------VLALFIGPGDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGL 869

Query: 484  RWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWD 305
            +W++  K    GE+DK+KAR+VAKG+HQ+ G+D+ + FAP A   TIR++L LA  KGW 
Sbjct: 870  KWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWS 929

Query: 304  VFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQAPRTWYKRLTSF 131
            VF LDVKSAFLH +L+E+V++ QP G+   E    V KLKK+LYGLKQAPR WY R+  F
Sbjct: 930  VFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEF 989

Query: 130  LKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
               +GF+    +  L+  +  ++   ++++ +VDD+I TG
Sbjct: 990  FGKEGFEKCYCEHTLFVKK--ERSDFLVVSVYVDDLIYTG 1027


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  399 bits (1026), Expect = e-108
 Identities = 240/654 (36%), Positives = 352/654 (53%), Gaps = 12/654 (1%)
 Frame = -1

Query: 1930 LFVMKPLKTECYLTNTEILN----LWHNRLGHIINVYLEKI-ETTVSHGLKNSISTSK-C 1769
            L   KP K    L   E+++    LWH R GH+    L+ +    +  GL    +T + C
Sbjct: 411  LLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEIC 470

Query: 1768 NNCIMAKLHRKPFKNRTR-TTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWC 1592
              C+  K HR+    +T   +S  L+++HSD+ GPITP +++ KRYIL F DD+++  W 
Sbjct: 471  AICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWV 530

Query: 1591 YLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVP 1412
            Y +  KSE F  F  F+  V+ E    + CLRTD G EFTSNEF +FC + GI R+ T  
Sbjct: 531  YFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAA 590

Query: 1411 YTPQQNRVV*RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFE 1232
            +TPQQN V  RKN+ ++  +R +L   Q+   +W EA K + HI N  P   V   TP E
Sbjct: 591  FTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEE 650

Query: 1231 MWYNLKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKV 1052
             W   KP + + RVFGC+ + HIP + R KLD K+K+ + +G SE SK +++ D   KK+
Sbjct: 651  AWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKI 710

Query: 1051 IVSRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*ND 872
            ++S+DV F ED                  + +D  + +   KE  LE  + +    E N 
Sbjct: 711  VISKDVVFDED------------------KSWDWDQADVEAKEVTLECGDEDD---EKNS 749

Query: 871  EIPSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGY 692
            E+  + I ++ S   V   N +   P+    P      P+ AK T E       R   G+
Sbjct: 750  EV-VEPIAVA-SPNHVGSDNNVSSSPILA--PSSPAPSPVAAKVTRE-------RRPPGW 798

Query: 691  LTRVRKNEG---DTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWEL 521
            +      EG   + NL   +  +     P    +A+ +  W+ AM++EI+ +    TWEL
Sbjct: 799  MADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTWEL 858

Query: 520  TKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIR 341
            T LPK    IG +WVY  K   +GE+DKYKAR+VAKG+ Q  GIDY + FAP A + T+R
Sbjct: 859  TTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVR 918

Query: 340  MLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQ 167
             +L ++    W++F LDVKSAFLH  L+EEVY+ QP G+      + V KL+K+LYGLKQ
Sbjct: 919  TILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQ 978

Query: 166  APRTWYKRLTSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGED 5
            APR WY R+ ++   + F+    +  L+       G  +I++ +VDD+I TG D
Sbjct: 979  APRAWYSRIEAYFLKEEFERCPSEHTLF--TKTRVGNILIVSLYVDDLIFTGSD 1030


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  397 bits (1019), Expect = e-107
 Identities = 235/646 (36%), Positives = 361/646 (55%), Gaps = 6/646 (0%)
 Frame = -1

Query: 1921 MKPLKTECYLTN-TEILNLWHNRLGHI-INVYLEKIETTVSHGLKNSISTSK-CNNCIMA 1751
            +K  K  C LT   E    WH RLGHI      +  +  +  GL       K C +C++ 
Sbjct: 315  LKVGKPSCLLTKINEEPWRWHARLGHINFKTIKDMAKLEMVRGLPEINEEKKLCESCLVG 374

Query: 1750 KLHRKPFKNRT-RTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*K 1574
            K  R  F + T   +S+ LE++H+DL GPI+P+T    RYI +  DD ++  W  L+K K
Sbjct: 375  KQTRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQNRYIFVIIDDNTRYMWSILLKEK 434

Query: 1573 SEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQN 1394
            SEVFE F  F+  V+ E N  I  LRTD G EFTS +F+ +C N GIRR  T PYTPQQN
Sbjct: 435  SEVFEKFKTFKALVEKEVNKVIVTLRTDRGGEFTSRDFQDYCNNNGIRRHLTAPYTPQQN 494

Query: 1393 RVV*RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLK 1214
             VV R+N+ L+EM R +L +  +    WGEA + AT+++N +P + +  +TP+E +   K
Sbjct: 495  GVVERRNRTLMEMTRSMLKAMNVPNYMWGEAVRHATYLINRVPTRALKNQTPYESFKGRK 554

Query: 1213 PSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDV 1034
            PSI H+RVFGCL +  +   L  KLD +++  + +G    SK Y++ +  T++++VSRDV
Sbjct: 555  PSIGHIRVFGCLAYAKLDAALLKKLDDRSQTLVHLGIEPGSKAYRLYNPSTRRIVVSRDV 614

Query: 1033 EFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQ 854
            +F E                     ++E++     K N  E+ + + T     DE     
Sbjct: 615  KFDEK----------------ACWNWNETD-----KGNQEESGKFHMTWGSSIDEGNGPF 653

Query: 853  IDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRK 674
            +  SH  + +  + E  EE  +    V + +     + +  +VK  + ++ + Y+     
Sbjct: 654  VIGSHQEENIATETEQQEETTEPTPEVDHVE----PRRSSREVK--LPKHLEDYILLA-- 705

Query: 673  NEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDKEV 494
             E +  L+ C       + P   +EA  +  W  A ++EI  ++  +TW+L   P   +V
Sbjct: 706  -EIECELLLCSIN----DEPSTYQEAKIHVRWTKACEDEIDSINRNQTWKLVDKPHGVKV 760

Query: 493  IGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNK 314
            IG +W++ IKR  +G I+K+KAR+VAKG+ Q+ GID+++ FAP A I +IR+L+ LA  K
Sbjct: 761  IGLKWIFKIKRNADGSINKFKARLVAKGYVQEHGIDFEEVFAPVARIESIRLLISLASAK 820

Query: 313  GWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSENLD--LVCKLKKSLYGLKQAPRTWYKRL 140
            GW++ HLDVK+AFLH  L EEVY+TQP G+ +  +   V KL K+LYGL+QAPR W  +L
Sbjct: 821  GWELHHLDVKTAFLHGELNEEVYVTQPEGFEKKGEEHKVFKLSKALYGLRQAPRAWNTKL 880

Query: 139  TSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGEDS 2
               LK   FK   ++ +++  E GDK   +I+A +VDD+ +TG  +
Sbjct: 881  DRVLKSLRFKKCMKESSVYRREEGDK--LLIIAIYVDDLFVTGNST 924


>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
          Length = 1493

 Score =  395 bits (1014), Expect = e-107
 Identities = 232/673 (34%), Positives = 370/673 (54%), Gaps = 41/673 (6%)
 Frame = -1

Query: 1897 YLTNTEILNLWHNRLGHIINVYLEKIETTVSHGLKNSISTSKCNNCIMAKLHRKPFKNRT 1718
            Y  ++E+L LWH R+GH    YL+ +  ++      +I   +C  C +AK HR  F    
Sbjct: 543  YSKDSELL-LWHKRMGHPSFQYLKHLFPSLCSN--KTILDFQCEVCELAKHHRTSFPKSK 599

Query: 1717 RTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFIDFQK 1538
               S    +IHSDL+GP        K++ + F DD++++ W YL+  K+EV  +F++F  
Sbjct: 600  YKPSIPFTLIHSDLWGPSRTPNRTHKKWFITFIDDHTRLCWVYLLTDKTEVRSVFMNFHY 659

Query: 1537 KVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQMLIE 1358
             +QT+ + KI  LRTDNGTE+ ++    + +  GI  + +   TPQQN V  RKN+ ++E
Sbjct: 660  MIQTQFHTKIQILRTDNGTEYFNHSLSTYLQENGIIHQSSCVDTPQQNGVAERKNRHILE 719

Query: 1357 MMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSI---SHL--R 1193
            + R LLFSS + T++WG++  TAT+++N +P + ++  TP + ++   P     +HL  R
Sbjct: 720  VARALLFSSHMPTQFWGDSILTATYLINRMPSRVLSFVTPLQKFHEFFPHSRLDAHLPLR 779

Query: 1192 VFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFI---- 1025
            VFG   F HI    R K DP+A + + +GYS T KGYK  D  ++K+ VS DV F     
Sbjct: 780  VFGSTVFVHIHGPKRNKFDPRALKXVFLGYSSTQKGYKCYDPISQKLYVSLDVTFFXHTP 839

Query: 1024 --------------------------EDNIPYISNKPREIVSHIQIEGFDESEIETPEKE 923
                                      E    +ISN       H+ + G  + E++T  +E
Sbjct: 840  YYSLQGESMSETRPSLTSDYLDVAMFESTPCFISNPSHNTEGHLNLGG--DMELQT-NRE 896

Query: 922  NVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVVI----QNELHEEPVQKENPVQNKKIP 755
             ++ ++   S   + N+ + S+ +     S+ V++    + + + + V  + P+  +K P
Sbjct: 897  TLVYSRRPKS---KFNETLISEALQ---ESESVIVPTPREYDFNSDQVTDDLPIAIRKQP 950

Query: 754  LWAKNTFEDVKGGVFRNYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWK 575
                 T   +   V  +Y+    + R            + +   + PKNI+EA    +WK
Sbjct: 951  --RSCTLHPISNXV--SYNSLSAKCR---------AFTTNLDRIQLPKNIQEAFEIPEWK 997

Query: 574  TAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKE 395
             A+  EI+ L   +TWE+  LP+ K+ +GC+W++T+K   +G +++YKAR+VAKGF Q  
Sbjct: 998  EAVMEEIRALEKNETWEVMNLPRGKKPVGCKWIFTVKYKADGTVERYKARLVAKGFTQTY 1057

Query: 394  GIDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--S 221
            GIDY +TFAP A + TIR+LL LA N  W +   D+K+AFL+  LEEEV+M  PPG+   
Sbjct: 1058 GIDYTETFAPVAKLNTIRVLLSLAANLDWPLHQFDIKNAFLNGELEEEVFMMLPPGFCKE 1117

Query: 220  ENLDLVCKLKKSLYGLKQAPRTWYKRLTSFLKDKGFKTSKQDPNLWYLESGDKGRPIILA 41
            E    VCKLKKSLYGLKQ+PR W+ R    +K++G++  + D  +++ +S D GR  IL 
Sbjct: 1118 EEETRVCKLKKSLYGLKQSPRAWFDRFAKVIKNQGYQQGQSDHTMFFKQSND-GRMTILI 1176

Query: 40   FHVDDIIITGEDS 2
             +VDDII+TG+D+
Sbjct: 1177 VYVDDIILTGDDT 1189


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  392 bits (1008), Expect = e-106
 Identities = 232/631 (36%), Positives = 342/631 (54%), Gaps = 7/631 (1%)
 Frame = -1

Query: 1882 EILNLWHNRLGHIINVYLEKI-ETTVSHGLKNSISTSKCNNCIMAKLHRKPFKNRTRTTS 1706
            E   +WH RLGH+    L+ + E  +  GLK S+S   C +C+++K HR  F   T  + 
Sbjct: 421  ETTMMWHRRLGHMSERGLKVLAERNLIPGLK-SVSLPFCEHCVISKQHRLKFAKSTARSK 479

Query: 1705 RCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFIDFQKKVQT 1526
              L++IHSD++      +    +Y + F DDYS+  W Y IK KS V+ +F +F+ +V+ 
Sbjct: 480  HILDLIHSDVWES-PEVSIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVEL 538

Query: 1525 ERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQMLIEMMRC 1346
            E   +I CLRTDNG E+T  +F  FC+ +GI R+ TV +TPQQN V  R N+ L+E  R 
Sbjct: 539  ETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRA 598

Query: 1345 LLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRVFGCLCFYH 1166
            +L ++ ++  +W EAAKTA +++N  P   +  KTP EMW       S LRVFGC  +  
Sbjct: 599  MLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVM 658

Query: 1165 IPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDNIPYISNKPRE 986
               + R KLDPK++R   +GY++  KGY++ D   +K+ VSRDV F+E+ +         
Sbjct: 659  YNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENEL--------- 709

Query: 985  IVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVVIQNEL 806
                              E++N   TKET +   E      + + +  H  QE    NE+
Sbjct: 710  ----------------QKEQKNDGTTKETATVEIEEKSGEENSEAEPEHEEQE---PNEV 750

Query: 805  HE-EPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEGDTNLICCVSEIP 629
            ++ EP +    ++    P W           V  ++D Y              C +SE  
Sbjct: 751  NDAEPRRTTRQIRK---PSWHSEY-------VMASHDAY--------------CLLSE-- 784

Query: 628  NPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRL 458
                P    EA++ +D   W  AM  EI+ L    TWEL +LPK ++ IG +WV+ IKR 
Sbjct: 785  -DGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRD 843

Query: 457  PNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSA 278
             N ++++Y+AR+V KG+ QKEGID+ + F+P   + TIR++L +       +  LDVK+A
Sbjct: 844  GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTA 903

Query: 277  FLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQAPRTWYKRLTSFLKDKGFKTS 104
            FLH  LEEE+YM QP G+   E  +LVC+L KSLYGLKQAPR WYKR  SF+   G+   
Sbjct: 904  FLHGELEEEIYMLQPEGFEEKERENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRL 963

Query: 103  KQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
              D +  Y +  D G  IIL  +VDD+++ G
Sbjct: 964  SSD-HCTYYKRFDDGDFIILLLYVDDMLVVG 993


>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1347

 Score =  392 bits (1007), Expect = e-106
 Identities = 233/648 (35%), Positives = 351/648 (54%), Gaps = 8/648 (1%)
 Frame = -1

Query: 1921 MKPLKTECYLTNTEILNLWHNRLGHIINVYLEKIETT-VSHGLKN-SISTSKCNNCIMAK 1748
            +  ++ E    N +    WH RLGH+ N  L++++   + +GL    ++   C  C + K
Sbjct: 438  LSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKETCKACNLGK 497

Query: 1747 LHRKPFKNRTRTTSR-CLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KS 1571
              RK F   ++T +R  LE++H+D+ GP+   + +  RY ++F DDY+ M W Y +K KS
Sbjct: 498  QSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQKS 557

Query: 1570 EVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNR 1391
            E F  F  F+  V+ + N  I  LR            + FCE++GI R+ T+PY+PQQN 
Sbjct: 558  ETFATFKKFKALVEKQSNCSIKTLRP----------MEVFCEDEGINRQVTLPYSPQQNG 607

Query: 1390 VV*RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQK-TPFEMWYNLK 1214
               RKN+ L+EM R +L    +  K W EA  T+ ++ N +P K +    TP E W   K
Sbjct: 608  AAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGHK 667

Query: 1213 PSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDV 1034
            P++SHLR+FG +C+ HIP + R KLD KAK GI++GYS  +KGY++   E +KV VSRDV
Sbjct: 668  PNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRDV 727

Query: 1033 EFIEDNIPYISNKPREIVSH--IQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPS 860
             F ED   +  +K  E+     + I    ES  +     + L   + ++   E       
Sbjct: 728  VFQEDK-KWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGE------- 779

Query: 859  DQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRV 680
                   +S  V+ Q    EE    E+P + K +    K   E               R+
Sbjct: 780  -----GETSSHVLSQVNDQEERETSESPKKYKSM----KEILEKAP------------RM 818

Query: 679  RKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDK 500
              +E    +  C+  + N E P+   EA  + +W+ AM+ EIK++   +TW+L   P+ K
Sbjct: 819  ENDEAAQGIEACL--VANEE-PQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKK 875

Query: 499  EVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAV 320
             VI  +W+Y IK   +G   K+KAR+VA+GF Q+ GIDY +TFAP +   TIR LL  A 
Sbjct: 876  NVISVKWIYKIKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAA 935

Query: 319  NKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQAPRTWYK 146
               W ++ +DVKSAFL+  LEEEVY+TQPPG+      + V +L K+LYGLKQAPR WY+
Sbjct: 936  QMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYE 995

Query: 145  RLTSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGEDS 2
            R+ S+    GF  S  D  L+  + G+    +I++ +VDD+IITG ++
Sbjct: 996  RIDSYFIQNGFARSMNDAALYSKKKGED--VLIVSLYVDDLIITGNNT 1041


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  390 bits (1003), Expect = e-106
 Identities = 238/651 (36%), Positives = 350/651 (53%), Gaps = 21/651 (3%)
 Frame = -1

Query: 1894 LTNTEILNLWHNRLGHIINVYLEKIETTVSHGLKNSISTSK---CNNCIMAKLHRKPFKN 1724
            L+N++  NLWH RLGH+  + L ++      GL +  S  K   C +CI  K  R  F  
Sbjct: 634  LSNSDATNLWHMRLGHMTEIGLAELS---KRGLLDGQSIGKLKFCEHCIFGKHKRVKFNT 690

Query: 1723 RTRTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFIDF 1544
             T TT   L+ +HSDL+GP   T++   RY++   DDYS+  W Y +K K + F++F ++
Sbjct: 691  STHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEW 750

Query: 1543 QKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQML 1364
            +  V+ +   K+  LRTDNG EF S  FK +C+++GI R  TVP+TPQQN V  R N+ +
Sbjct: 751  KTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 810

Query: 1363 IEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRVFG 1184
            I   RCLL ++ +  ++W EA  TA +++N  P   + +KTP E+W     + S LRVFG
Sbjct: 811  ISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFG 870

Query: 1183 CLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIED----- 1019
            C  + H+     GKL+P+A + I +GY    KGYK+   ETKKV++SR+V F E      
Sbjct: 871  CTAYAHVD---NGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHD 927

Query: 1018 ----NIPYISNKPREI-VSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQ 854
                N+P  S +   + V H+   G        PEKE+V                I  D+
Sbjct: 928  KPSTNVPVESQEKASVQVEHLISSG------HAPEKEDV---------------AINQDE 966

Query: 853  IDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRK 674
              +  S+  +V Q+   +  + K+ P +N K P   +   E+       N   Y   V  
Sbjct: 967  PVIEDSNSSIVQQSP--KRSIAKDRPKRNIKPP---QRYIEEA------NIVAYALSV-- 1013

Query: 673  NEGDTNLICCVSEIPNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKD 503
                        EI     P    EA+ + D   W TAM +E++ L    TWEL KLPK+
Sbjct: 1014 ----------AEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKE 1063

Query: 502  KEVIGCRWVYTIKR-LPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKL 326
            K+ I C+W++  K  + + +  +YKAR++AKG+ Q  GID+   F+P     +IR LL +
Sbjct: 1064 KKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSI 1123

Query: 325  AVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY----SENLDLVCKLKKSLYGLKQAPR 158
                 +++  +DVK+AFLH  LEE++YM QP G+     EN  LVC+LKKSLYGLKQ+PR
Sbjct: 1124 VAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKEN--LVCRLKKSLYGLKQSPR 1181

Query: 157  TWYKRLTSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGED 5
             WYKR  SF+  + F+ S  D +  YL+  D G  I L  +VDD++I  +D
Sbjct: 1182 QWYKRFDSFMLSQKFRRSNYD-SCVYLKVVD-GSAIYLLLYVDDMLIAAKD 1230


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  390 bits (1001), Expect = e-105
 Identities = 237/643 (36%), Positives = 351/643 (54%), Gaps = 13/643 (2%)
 Frame = -1

Query: 1900 CYLTN-TEILNLWHNRLGHIINVYLEKI-ETTVSHGLKNSISTSKCNNCIMAKLHRKPFK 1727
            C  +N  E   +WH +LGH+    L+ + E  +  GLK S+S   C +C+ +K HR  F 
Sbjct: 414  CVASNGEESTMMWHLKLGHMSEQGLKILSERKLPPGLK-SVSLPFCEHCVTSKQHRLKF- 471

Query: 1726 NRTRTTSRC-LEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFI 1550
            +R+   S+C L++IHSD++      +    +Y++ F DDYS+  W Y IK KS+VF +F 
Sbjct: 472  SRSIARSKCILDLIHSDVWES-PDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFK 530

Query: 1549 DFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQ 1370
            +++  V+ E   KI CLRTDNG E+T +EF  FC+ +GI+R+ TV YTPQQN V  R N+
Sbjct: 531  EYKAWVELESGKKIKCLRTDNGGEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNR 590

Query: 1369 MLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRV 1190
             L E +R +L ++ +   +W EAAKTA +I+N  P   +  KT  EMW       S+L  
Sbjct: 591  TLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHA 650

Query: 1189 FGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDNIP 1010
            FGC  +     + R KLDPK+++ I +GY++  KGY++ D    K+++SRDV F+ED   
Sbjct: 651  FGCPVYVMYNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVED--- 707

Query: 1009 YISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSHSSQ 830
                         Q++  D  +    EK   +     N+  PE +D            S 
Sbjct: 708  -------------QLQRKDGDDGTVKEKSETVPVYVENN--PENSD------------SS 740

Query: 829  EVVIQNELHEEPVQKENP-----VQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEG 665
            E   ++E  +EPV+ E P      + ++ P W               +  Y+T +     
Sbjct: 741  EAAPEHE-EQEPVESEAPEVRRSTRERRPPTW---------------HSEYVTEI----- 779

Query: 664  DTNLICCVSEIPNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEV 494
              N+  C+  +     P    EAL++ D   W TAM  EI+ L   KTWEL  LP  ++ 
Sbjct: 780  --NVAYCL--LTEDGEPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELVPLPHGRKA 835

Query: 493  IGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNK 314
            IG +WVY IKR  N ++++Y+AR+V KG+ QKEGID+ + F+P   + T+R++L +    
Sbjct: 836  IGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATF 895

Query: 313  GWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSE--NLDLVCKLKKSLYGLKQAPRTWYKRL 140
               +  LDVK+AFLH  LEEE+YM QP G++E    +LVC+L KSLYGLKQAPR WYKR 
Sbjct: 896  DLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRF 955

Query: 139  TSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
             SF+   G+     D   +Y    D    IIL  +VDD+++ G
Sbjct: 956  DSFIMSLGYNRLSSDHCAYYKRFEDNDF-IILLLYVDDMLVAG 997


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  390 bits (1001), Expect = e-105
 Identities = 234/631 (37%), Positives = 342/631 (54%), Gaps = 7/631 (1%)
 Frame = -1

Query: 1882 EILNLWHNRLGHIINVYLEK-IETTVSHGLKNSISTSKCNNCIMAKLHRKPFKNRTRTTS 1706
            E   +WH RLGH+    L+  +E  + HGLK +++   C +C+M+K HR  F   T  + 
Sbjct: 421  ETTMMWHQRLGHMSERGLKVLVERNLLHGLK-TVNLPFCEHCVMSKQHRLKFARVTTRSK 479

Query: 1705 RCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFIDFQKKVQT 1526
              L++IHSD++      +    RY + F DDYS+  W Y IK KS+VF +F  F+ +++ 
Sbjct: 480  HILDLIHSDVWES-PEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIEL 538

Query: 1525 ERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQMLIEMMRC 1346
            E   KI CLRTDNG E+   EF  FC+ +GI R+ TV +TPQQN V  R N+ L+E  R 
Sbjct: 539  ETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRA 598

Query: 1345 LLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRVFGCLCFYH 1166
            +L ++ ++  +W EAAKTA +++N  P   +  KTP EMW       S L VFGC  +  
Sbjct: 599  MLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVM 658

Query: 1165 IPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDNIPYISNKPRE 986
               + + KLDPK+++ I +GY++  KGY++ D   +KV+VSRDV F E+ +         
Sbjct: 659  YNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQ-------- 710

Query: 985  IVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVVIQNEL 806
                       E + ++  KE  +   E  S       E  S + +  H  QE    N+ 
Sbjct: 711  ----------SEQKNDSTSKETAIVQMEEKSK------ESDSSEAESVHEEQEPDDVND- 753

Query: 805  HEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEGDTNLICCVSEIPN 626
                  + +  Q +K P W  +        V  ++D Y              C ++E   
Sbjct: 754  ----GVRRSTRQTQK-PSWQSDY-------VMTSHDAY--------------CLITE--- 784

Query: 625  PEG-PKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRL 458
             EG P    EAL+ +D   W TAM  E++ L   KTWEL +LPK ++ IG +WVY IKR 
Sbjct: 785  -EGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRD 843

Query: 457  PNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSA 278
             N ++++Y+AR+V KG+ QKEGID+ + F+P   + TIR++L +       +  LDVK+A
Sbjct: 844  GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTA 903

Query: 277  FLHRNLEEEVYMTQPPGYSE--NLDLVCKLKKSLYGLKQAPRTWYKRLTSFLKDKGFKTS 104
            FLH  LEEE+YM QP G+ E    +LVC+L KSLYGLKQAPR WYKR  SF+    +   
Sbjct: 904  FLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRL 963

Query: 103  KQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
              D +  Y +  D    IIL  +VDD+++ G
Sbjct: 964  SSD-HCTYYKRFDGNDFIILLLYVDDMLVVG 993


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  389 bits (998), Expect = e-105
 Identities = 237/643 (36%), Positives = 351/643 (54%), Gaps = 13/643 (2%)
 Frame = -1

Query: 1900 CYLTN-TEILNLWHNRLGHIINVYLEKI-ETTVSHGLKNSISTSKCNNCIMAKLHRKPFK 1727
            C  +N  E   +WH +LGH+    L+ + E  +  GLK S+S   C +C+ +K HR  F 
Sbjct: 414  CVASNGEESTMMWHLKLGHMSEQGLKILSERKLLPGLK-SVSLPFCEHCVTSKQHRLKF- 471

Query: 1726 NRTRTTSRC-LEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFI 1550
            +R+   S+C L++IHSD++      +    +Y++ F DDYS+  W Y IK KS+VF +F 
Sbjct: 472  SRSIARSKCILDLIHSDVWES-PDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFK 530

Query: 1549 DFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQ 1370
            +++  V+ E   KI CLRTDNG E+T  EF  FC+ +GI+R+ TV YTPQQN V  R N+
Sbjct: 531  EYKAWVELESGKKIKCLRTDNGGEYTDGEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNR 590

Query: 1369 MLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRV 1190
             L E +R +L ++ +   +W EAAKTA +I+N  P   +  KT  EMW       S+L  
Sbjct: 591  TLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHA 650

Query: 1189 FGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDNIP 1010
            FGC  +     + R KLD K++R I +GY++  KGY++ D    K+++SRDV F+ED   
Sbjct: 651  FGCPMYVMYNAQERTKLDAKSRRCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVED--- 707

Query: 1009 YISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSHSSQ 830
                         Q++  D  +    EK   +     N+  PE +D            S 
Sbjct: 708  -------------QLQRKDGDDGTVKEKSETVPVYVENN--PENSD------------SS 740

Query: 829  EVVIQNELHEEPVQKENP-----VQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEG 665
            E   ++E  +EPV+ E P      + ++ P W               +  Y+T +     
Sbjct: 741  EAAPEHE-EQEPVESEAPEVRRSTRERRPPTW---------------HSEYVTEI----- 779

Query: 664  DTNLICCVSEIPNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEV 494
              N+  C+  +     P    EAL+++D   W TAM  EI+ L   KTWEL  LP+ ++ 
Sbjct: 780  --NVAYCL--LTEDGEPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELVPLPRGRKA 835

Query: 493  IGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNK 314
            IG +WVY IKR  N ++++Y+AR+V KG+ QKEGID+ + F+P   + T+R++L +    
Sbjct: 836  IGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATF 895

Query: 313  GWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSE--NLDLVCKLKKSLYGLKQAPRTWYKRL 140
               +  LDVK+AFLH  LEEE+YM QP G++E    +LVC+L KSLYGLKQAPR WYKR 
Sbjct: 896  DLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRYWYKRF 955

Query: 139  TSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
             SF+   G+     D   +Y    D    IIL  +VDD+++ G
Sbjct: 956  DSFIMSLGYNRLSSDHCAYYKRFEDNDF-IILLLYVDDMLVAG 997


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  387 bits (994), Expect = e-105
 Identities = 233/631 (36%), Positives = 341/631 (54%), Gaps = 7/631 (1%)
 Frame = -1

Query: 1882 EILNLWHNRLGHIINVYLEKI-ETTVSHGLKNSISTSKCNNCIMAKLHRKPFKNRTRTTS 1706
            E   +WH RLGH+    L+ + E  + HGLK +++   C +C+++K HR  F   T  + 
Sbjct: 421  ETTMMWHQRLGHMSERGLKVLAERNLLHGLK-AVNLPFCEHCVISKQHRLKFARVTTRSK 479

Query: 1705 RCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFIDFQKKVQT 1526
              L++IHSD++      +    RY + F DDYS+  W Y IK KS+VF +F  F+ +++ 
Sbjct: 480  HILDLIHSDVWES-PEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIEL 538

Query: 1525 ERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQMLIEMMRC 1346
            E   KI CLRTDNG E+   EF  FC+ +GI R+ TV +TPQQN V  R N+ L+E  R 
Sbjct: 539  ETRKKIKCLRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRA 598

Query: 1345 LLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRVFGCLCFYH 1166
            +L ++ ++  +W EA KTA +++N  P   +  KTP EMW       S L VFGC  +  
Sbjct: 599  MLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVM 658

Query: 1165 IPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDNIPYISNKPRE 986
               + R KLDPK+++ I +GY++  KGY++ D   +KV+VSRDV F E+ +         
Sbjct: 659  YNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQ-------- 710

Query: 985  IVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVVIQNEL 806
                       E + ++  KE  +   E  S       E  S + +  H  QE    N+ 
Sbjct: 711  ----------SEQKNDSTSKETAIVQMEEKSK------ESDSSEAESVHEEQEPDDVND- 753

Query: 805  HEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEGDTNLICCVSEIPN 626
                  + +  Q +K P W  +        V  ++D Y              C ++E   
Sbjct: 754  ----GVRRSTRQTQK-PSWQSDY-------VMTSHDAY--------------CLITE--- 784

Query: 625  PEG-PKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRL 458
             EG P    EAL+ +D   W TAM  E++ L   KTWEL +LPK ++ IG +WVY IKR 
Sbjct: 785  -EGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRD 843

Query: 457  PNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSA 278
             N ++++Y+AR+V KG+ QKEGID+ + F+P   + TIR++L +       +  LDVK+A
Sbjct: 844  GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTA 903

Query: 277  FLHRNLEEEVYMTQPPGYSE--NLDLVCKLKKSLYGLKQAPRTWYKRLTSFLKDKGFKTS 104
            FLH  LEEE+YM QP G+ E    +LVC+L KSLYGLKQAPR WYKR  SF+    +   
Sbjct: 904  FLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRL 963

Query: 103  KQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
              D +  Y +  D    IIL  +VDD+++ G
Sbjct: 964  SSD-HCTYYKRFDGNDFIILLLYVDDMLVVG 993


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  387 bits (993), Expect = e-104
 Identities = 232/632 (36%), Positives = 339/632 (53%), Gaps = 8/632 (1%)
 Frame = -1

Query: 1882 EILNLWHNRLGHIINVYLEK-IETTVSHGLKNSISTSKCNNCIMAKLHRKPFKNRTRTTS 1706
            E   +WH RLGH+    L+  +E  + HGLK +++   C +C+++K HR  F   T  + 
Sbjct: 421  ETTMMWHQRLGHMSERGLKVLVERNLLHGLK-TVNLPFCEHCVISKQHRLKFARVTTRSK 479

Query: 1705 RCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFIDFQKKVQT 1526
              L++IHSD++      +    RY + F DDYS+  W Y IK KS+VF +F  F+ +++ 
Sbjct: 480  HILDLIHSDVWES-PKLSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIEL 538

Query: 1525 ERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQMLIEMMRC 1346
            E   KI CLRTDNG E+   EF  FC+ +GI R+ TV +TPQQN V  R N+ L+E  R 
Sbjct: 539  ETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRA 598

Query: 1345 LLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRVFGCLCFYH 1166
            +L +++++  +W EA KTA +++N  P   +  KTP EMW       S L VFGC  +  
Sbjct: 599  MLKTAEMAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLHVFGCPVYVM 658

Query: 1165 IPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDNIPYISNKPRE 986
               + R KLDPK+++ I +GY++  KGY++ D   +KV+VSRDV F E+ +         
Sbjct: 659  YNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQ-------- 710

Query: 985  IVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVV-IQNE 809
                       E + ++  KE  +   E  S       E  S + +  H  QE   + N 
Sbjct: 711  ----------SEQKNDSTFKETAILQIEEKSK------ESDSSEAESVHEEQEPDDVNNG 754

Query: 808  LHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEGDTNLICCVSEIP 629
            +     Q + P        W  +        V   +D Y              C ++E  
Sbjct: 755  VRRSTRQTQKPS-------WQSDY-------VMTGHDAY--------------CLIAE-- 784

Query: 628  NPEG-PKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKR 461
              EG P    EAL+ +D   W TA+  E++ L   KTWEL +LPK ++ IG +WVY IKR
Sbjct: 785  --EGEPSTFHEALNGSDASQWMTAIHEEMEALRKNKTWELVELPKGRKAIGNKWVYKIKR 842

Query: 460  LPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKS 281
              N ++++Y+AR+V KG+ QKEGID+ + F+P   + TIR++L +       +  LDVK+
Sbjct: 843  DGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKT 902

Query: 280  AFLHRNLEEEVYMTQPPGYSE--NLDLVCKLKKSLYGLKQAPRTWYKRLTSFLKDKGFKT 107
            AFLH  LEEE+YM QP G+ E    +LVC+L KSLYGLKQAPR WYKR  SF+    +  
Sbjct: 903  AFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNR 962

Query: 106  SKQDPNLWYLESGDKGRPIILAFHVDDIIITG 11
               D +  Y +  D    IIL  +VDDI++ G
Sbjct: 963  LSSD-HCTYYKRFDGNDFIILLLYVDDILVVG 993


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  384 bits (986), Expect = e-104
 Identities = 222/696 (31%), Positives = 363/696 (52%), Gaps = 42/696 (6%)
 Frame = -1

Query: 1966 KKIVAEGSEHNGLFVMKPLKTECYLTNTEIL---NLWHNRLGHIINVYLEKIETTVSHGL 1796
            +K+V++G   NGL+V++  +   + +N +      +WH+RLGH  +  L++++++     
Sbjct: 423  QKVVSKGPRSNGLYVLENQEFVAFYSNRQCAASEEIWHHRLGHSNSRILQQLKSSKEISF 482

Query: 1795 KNSISTSKCNNCIMAKLHRKPFKNRTRTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSD 1616
              S  +  C  C M K  +  F +        L  IH DL+GP    +    +Y ++F D
Sbjct: 483  NKSRMSPVCEPCQMGKSSKLQFFSSNSRELDLLGRIHCDLWGPSPVVSKQGFKYYVVFVD 542

Query: 1615 DYSKMKWCYLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKG 1436
            DYS+  W Y +K KS+ F +F+ FQ  V+ + N KI   ++D G EFTSN  K+   + G
Sbjct: 543  DYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLTDCG 602

Query: 1435 IRREQTVPYTPQQNRVV*RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKE 1256
            I+   + PYTPQQN +  RK++  +E+   ++F S    ++W EA  TA+ + N++P   
Sbjct: 603  IQHRISCPYTPQQNGIAERKHRHFVELGLSMMFHSHTPLQFWVEAFFTASFLSNMLPSPS 662

Query: 1255 VAQKTPFEMWYNLKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKI 1076
            +   +P E     KP+ + LRVFG  C+  +      K +P++ + + +GY+   KGY+ 
Sbjct: 663  LGNVSPLEALLKQKPNYAMLRVFGTACYPCLRPLGEHKFEPRSLQCVFLGYNSQYKGYRC 722

Query: 1075 IDEETKKVIVSRDVEFIEDNIPY-------ISNKPREIVSHIQ----------IEGFDES 947
            +   T +V +SR V F E+  P+       +      ++S  Q          I   +E 
Sbjct: 723  LYPPTGRVYISRHVIFDEETFPFKQKYQFLVPQYESSLLSAWQSSIPQADQSLIPQAEEG 782

Query: 946  EIETPEK--------------------ENVLETKETNSTRPE*NDEIPSDQIDLSHSSQE 827
            +IE+  K                    E VL  +E   +  E   E  +++    +   E
Sbjct: 783  KIESLAKPPSIQKNTIQDTTTQPAILTEGVLNEEEEEDSFEETETESLNEETHTQNDEAE 842

Query: 826  VVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEGDTNLIC 647
            V ++ E+ +EP +  +P+  +             K G+ ++   Y     K         
Sbjct: 843  VTVEEEVQQEP-ENTHPMTTRS------------KAGIHKSNTRYALLTSKF-------- 881

Query: 646  CVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTI 467
                  + E PK+I EAL++  W  A+++E++ +    TW L +  +D  ++GCRWV+  
Sbjct: 882  ------SVEEPKSIDEALNHPGWNNAVNDEMRTIHMLHTWSLVQPTEDMNILGCRWVFKT 935

Query: 466  KRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDV 287
            K  P+G +DK KAR+VAKGFHQ+EG+DY +TF+P     TIR++L +A  KGW++  LDV
Sbjct: 936  KLKPDGSVDKLKARLVAKGFHQEEGLDYLETFSPVVRTATIRLVLDVATAKGWNIKQLDV 995

Query: 286  KSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQAPRTWYKRLTSFLKDKGF 113
             +AFLH  L+E VYM QPPG+   E    VC+L K+LYGLKQAPR W+  ++++L D GF
Sbjct: 996  SNAFLHGELKEPVYMLQPPGFVDQEKPSYVCRLTKALYGLKQAPRAWFDTISNYLLDFGF 1055

Query: 112  KTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGED 5
              SK DP+L+       G+ ++L  +VDDI++TG D
Sbjct: 1056 SCSKSDPSLFTYHK--NGKTLVLLLYVDDILLTGSD 1089


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  382 bits (981), Expect = e-103
 Identities = 231/642 (35%), Positives = 348/642 (54%), Gaps = 12/642 (1%)
 Frame = -1

Query: 1894 LTNTEILNLWHNRLGHIINVYLEKIETTVSHGLKNSISTSK---CNNCIMAKLHRKPFKN 1724
            L+N++  NLWH RLGH+  + L ++      GL +  S  K   C +CI  K  R  F  
Sbjct: 336  LSNSDATNLWHMRLGHMSEIGLAELS---KRGLLDGQSIGKLKFCEHCIFGKHKRVKFNT 392

Query: 1723 RTRTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFIDF 1544
             T TT   L+ +HSDL+GP   T++   RY++   DDYS+  W Y +K K + F++F ++
Sbjct: 393  STHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEW 452

Query: 1543 QKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQML 1364
            +  V+ +   K+  LRTDNG E  S  FK +C+++GI R  TVP+TPQQN V  R N+ +
Sbjct: 453  KTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 512

Query: 1363 IEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRVFG 1184
            I   RC+L ++ +  ++W EA  TA +++N  P   + +KTP E+W     + S LRVFG
Sbjct: 513  ISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFG 572

Query: 1183 CLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDNIPYI 1004
            C  + H+     GKL+P+  + I +GY    KGYK+   ETKKV++SR+V F E  +  +
Sbjct: 573  CTAYAHVD---NGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIM--L 627

Query: 1003 SNKPREIVSHIQIEGFDESEIETPEKENV-LETKETNSTRPE*NDEIPSDQIDLSHSSQE 827
             +KP   V            +E+ EK +V +E   ++   PE  D   +    +   S  
Sbjct: 628  HDKPSTNV-----------PVESQEKVSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDS 676

Query: 826  VVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEGDTNLIC 647
             ++Q +  +  + K+ P +N K P   +   E+       N   Y   V           
Sbjct: 677  SIVQ-QSPKRSIAKDRPKRNTKPP---RRYIEEA------NIVAYALSV----------- 715

Query: 646  CVSEIPNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWV 476
               EI     P    +A+ + D   W TAM +E++ L    +WEL KLPK+K+ I C+W+
Sbjct: 716  -AEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWI 774

Query: 475  YTIKR-LPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWDVF 299
            +  K  +   +  +YKAR+VAKG+ Q  GID+   F+P     +IR LL +     +++ 
Sbjct: 775  FKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELE 834

Query: 298  HLDVKSAFLHRNLEEEVYMTQPPGY----SENLDLVCKLKKSLYGLKQAPRTWYKRLTSF 131
             +DVK+AFLH  LEE++YM QP G+     EN  LVC+LKKSLYGLKQ+PR WYKR  SF
Sbjct: 835  QMDVKTAFLHGELEEDIYMEQPEGFVVPGKEN--LVCRLKKSLYGLKQSPRQWYKRFDSF 892

Query: 130  LKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGED 5
            +  + F+ S  D +  YL+  D G  I L  +VDD++I  +D
Sbjct: 893  MLSQKFRRSNYD-SCVYLKVVD-GSAIYLLLYVDDMLIAAKD 932


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  382 bits (980), Expect = e-103
 Identities = 229/654 (35%), Positives = 345/654 (52%), Gaps = 22/654 (3%)
 Frame = -1

Query: 1900 CYLTNT-EILNLWHNRLGHIINVYLEKIETTVSHGLKNSIST-----SKCNNCIMAKLHR 1739
            C LT   E   LWH RLGH   V  + ++     G+   I         C  C++AK  R
Sbjct: 483  CLLTRMDEPAWLWHARLGH---VNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIR 539

Query: 1738 KPFKNRTR-TTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVF 1562
            +PF           LE++H DL GPITPTT    RY ++  DD+S+  W ++IK K +  
Sbjct: 540  QPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKDQAL 599

Query: 1561 EIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV* 1382
            E F  F+   +     +I  LR+D G EF S EF Q CE  GI+R  T PY+PQQN VV 
Sbjct: 600  EAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSPQQNGVVE 659

Query: 1381 RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSIS 1202
            R+N+ ++ M R L+    +  ++WGEA + A ++LN +P K +  +TPFE W   KP + 
Sbjct: 660  RRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEAWTGRKPQLG 719

Query: 1201 HLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIE 1022
            HLRVFGC+    I    + KLD ++   + +G  E SK +++ D    ++ VSRDV F E
Sbjct: 720  HLRVFGCIAHAKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRCGRIHVSRDVIF-E 778

Query: 1021 DNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLS 842
            +N+P+             + G   S   T E++ V          P      PS  +  S
Sbjct: 779  ENVPW---------QWSVVAGEQNSTEFTVEEDGVDAPPAGAPAYPVPRYRAPSPAVPQS 829

Query: 841  HSSQEVVIQNELHEEP------VQKENPVQNKKIPLWAKNTFEDVKGGV----FRNYDGY 692
              +  V   + L   P           P      P+ +  +  D++       FR+ +  
Sbjct: 830  PPASPVGASSSLPTSPQSSPSSTPPSTPATGSAGPVASPGSGGDLRSDEGPVRFRSLEDI 889

Query: 691  L---TRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWEL 521
            +    RV   E + +    ++E+   E P + REA     W+ AM  E++ +    TW L
Sbjct: 890  MREAPRVDLVEDEHDGDALLAEM---EEPSSYREAAGQPAWENAMAQELQAIEKNSTWAL 946

Query: 520  TKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIR 341
            T LP   + IG +WVY +K+   GE+ K+KAR+VAKG+ Q++G+D+++ FAP A + T+R
Sbjct: 947  TALPAGHKPIGLKWVYKLKKNTAGEVIKHKARLVAKGYVQRQGVDFEEVFAPVARLDTVR 1006

Query: 340  MLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSENLD--LVCKLKKSLYGLKQ 167
            ++L +A ++ W+V HLDVKSAFL+ +LEEEVY+ QP G+ +  +  LV +L K+LYGL+Q
Sbjct: 1007 VILAIAADRRWEVHHLDVKSAFLNGDLEEEVYVAQPEGFVKRGEEHLVLRLSKALYGLRQ 1066

Query: 166  APRTWYKRLTSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGED 5
            APR W  RL   LK+ GF    Q+  ++    G  G  +I+  +VDD+I+TGE+
Sbjct: 1067 APRAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAG--VIVGVYVDDLIVTGEN 1118


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  382 bits (980), Expect = e-103
 Identities = 227/634 (35%), Positives = 343/634 (54%), Gaps = 9/634 (1%)
 Frame = -1

Query: 1882 EILNLWHNRLGHIIN---VYLEKIETTVSHGLKNSISTSKCNNCIMAKLHRKPFKNRTRT 1712
            ++  LWH RLGH+       L K +    H +K   S   C +C+  KLHR  F      
Sbjct: 409  DMTKLWHIRLGHMGERGMQILSKEDLLAGHKVK---SLEFCEHCVFGKLHRNKFPKAIHR 465

Query: 1711 TSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK*KSEVFEIFIDFQKKV 1532
            T   L+ IHSD +GP    +    R+ +   DDYS+M W Y++K KSE F+ F +++  +
Sbjct: 466  TKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILM 525

Query: 1531 QTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNRVV*RKNQMLIEMM 1352
            + +   KI  LRTDNG EF  +EF QFC+++GI R +TV  TPQQN V  R NQ L+E  
Sbjct: 526  ENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERA 585

Query: 1351 RCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNLKPSISHLRVFGCLCF 1172
            RC+L ++ +  ++W EA  TA +++N  P   +  KTP EMW       S+L+ FGC  +
Sbjct: 586  RCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAY 645

Query: 1171 YHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDNIPYISNKP 992
            YH+ +   GKL+P+AK+G+ VGY +  KG++I     K+VI+SR+V F E  +     KP
Sbjct: 646  YHVSE---GKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKP 702

Query: 991  REIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVVIQN 812
                +     G  + ++E    +N  + KE     PE  D+ P  + D+  S     + +
Sbjct: 703  ----TTTSETGSLDKQVEFQVIQNESDLKE-----PEEEDQEPQTETDIPES-----MPS 748

Query: 811  ELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVRKNEGDTNLICCVSEI 632
            ++H+   Q        + P   +  FED+ G   +                     V+E 
Sbjct: 749  DIHQSIAQDRPRRVGVRPP--TRYGFEDMVGYALQ---------------------VAEE 785

Query: 631  PNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKR 461
             +   P   +EA+ ++D   W  AM +E++ L   +TW+L   P  +++I C+WV+  K 
Sbjct: 786  VDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKE 845

Query: 460  -LPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVK 284
             +   E  KYKARVVA+GF+Q+EG+DY + F+P     +IR+LL +  ++  ++  LDVK
Sbjct: 846  GISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVK 905

Query: 283  SAFLHRNLEEEVYMTQPPGYS--ENLDLVCKLKKSLYGLKQAPRTWYKRLTSFLKDKGFK 110
            +AFLH  LEEE+YMTQP G+      + VCKLKKSLYGLKQ+PR WYKR  S++   G+ 
Sbjct: 906  TAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYT 965

Query: 109  TSKQDPNLWYLESGDKGRPIILAFHVDDIIITGE 8
             S  D  ++Y    D    I L  +VDD++I  +
Sbjct: 966  RSSYDCCVYYNRLNDDSF-IYLVLYVDDMLIAAK 998


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  380 bits (976), Expect = e-102
 Identities = 215/646 (33%), Positives = 340/646 (52%), Gaps = 15/646 (2%)
 Frame = -1

Query: 1897 YLTNTEI-------------LNLWHNRLGHIINVYLEKIETTVSHGLKNSISTSKCNNCI 1757
            Y TN EI             ++LWH R+GH+    L+ +            +   C+ C+
Sbjct: 402  YRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCL 461

Query: 1756 MAKLHRKPFKNRTRTTSRCLEVIHSDLYGPITPTTYN*KRYILIFSDDYSKMKWCYLIK* 1577
              K HR  F+  +      L++++SD+ GP+   +    +Y + F DD S+  W Y++K 
Sbjct: 462  FGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKT 521

Query: 1576 KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQ 1397
            K +VF++F  F   V+ E   K+  LR+DNG E+TS EF+++C + GIR E+TVP TPQ 
Sbjct: 522  KDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQH 581

Query: 1396 NRVV*RKNQMLIEMMRCLLFSSQISTKWWGEAAKTATHILNLIPRKEVAQKTPFEMWYNL 1217
            N V  R N+ ++E +R +L  +++   +WGEA +TA +++N  P   +A + P  +W N 
Sbjct: 582  NGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNK 641

Query: 1216 KPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRD 1037
            + S SHL+VFGC  F H+PKE R KLD K+   I +GY +   GY++ D   KKVI SRD
Sbjct: 642  EVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRD 701

Query: 1036 VEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSD 857
            V F E  +   ++   ++ +     G   + +  P   N   + E+ +       E P +
Sbjct: 702  VVFRESEVRTAADMSEKVKN-----GIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGE 756

Query: 856  QIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVKGGVFRNYDGYLTRVR 677
             I+      E V + E   +  ++  P++  + P                       RV 
Sbjct: 757  VIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERP-----------------------RVE 793

Query: 676  KNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDKE 497
                 +     +S+   PE  K +           AM  E++ L    T++L +LPK K 
Sbjct: 794  SRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKR 853

Query: 496  VIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGIDYKKTFAPTANIRTIRMLLKLAVN 317
             + C+WV+ +K+  + ++ +YKAR+V KGF QK+GID+ + F+P   + +IR +L LA +
Sbjct: 854  PLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAAS 913

Query: 316  KGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQAPRTWYKR 143
               +V  LDVK+AFLH +LEEE+YM QP G+  +    +VCKL KSLYGLKQAPR WY +
Sbjct: 914  LDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMK 973

Query: 142  LTSFLKDKGFKTSKQDPNLWYLESGDKGRPIILAFHVDDIIITGED 5
              SF+K + +  +  DP + Y +   +   IIL  +VDD++I G+D
Sbjct: 974  FDSFMKSQTYLKTYSDPCV-YFKRFSENNFIILLLYVDDMLIVGKD 1018