BLASTX nr result

ID: Ephedra26_contig00014039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00014039
         (933 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_009071704.1| predicted protein [Streptomyces sp. AA4] gi|...   110   8e-22
ref|WP_009326767.1| pertussis toxin, subunit 1 [Streptomyces ipo...    59   3e-06
ref|WP_010351089.1| hypothetical protein [Streptomyces acidiscab...    57   8e-06

>ref|WP_009071704.1| predicted protein [Streptomyces sp. AA4] gi|302432602|gb|EFL04418.1|
            predicted protein [Streptomyces sp. AA4]
          Length = 2761

 Score =  110 bits (275), Expect = 8e-22
 Identities = 81/300 (27%), Positives = 134/300 (44%), Gaps = 28/300 (9%)
 Frame = +3

Query: 117  HPQLRQSSKPVTLPKVVYRG--DSRSPAEIMASGGFISQGTKYDVFVEHML--GKVTDAH 284
            HP LR+    V  P  VY G  D R PA++  S G  + GT+Y    +  L    +    
Sbjct: 518  HPGLREQGS-VAKPDSVYLGVEDERGPAKVF-SAGISAPGTEYSTLTDQWLQNSHLDVLK 575

Query: 285  QSGYISTTTDLNVAQTFAAPVGRSEYKPASW--------WPWTYPRKESEGWV------- 419
             SG+++TT   + A+  A P+ R++++P ++        W W Y  + +E +V       
Sbjct: 576  DSGWVTTTESADRAKAEAVPLSRAQFQPGTYRSPPRLVAWGWVYEIEPTEFFVSAQASAA 635

Query: 420  -----YEXXXXXXXXFENEARTEYHVRM-TSATKEWVAVRKINANKIVRATKYKRVFPLD 581
                 Y            +  T   +   T AT+EW A+R+I+   I+ A  Y+  +   
Sbjct: 636  RIKNGYPDLPADKKAVYKDFETATPLSAATQATREWSAIRRISPENIIGAKHYRATYQAT 695

Query: 582  REGRVTSFNGPFEKV---EDWKNTGYSKTATGYDPYKDRTSGWSNQERLLSDLNEHPQHG 752
             +GRV   N   E++   +   N  Y   A GYDPY DR SGWS+   +   L+  P  G
Sbjct: 696  SDGRVADPNPKVEELPAGDAAANRAYKPAAAGYDPYADRGSGWSDTATVFKPLDRDPWRG 755

Query: 753  TAESEARFEHKPPRICTGRRTRALSAESPCGIADWDKIRKRSKETVKEVVTDAEHMARIP 932
              E++        +I  G    A +  +  G+   D + +R+ + V++++ D + MA IP
Sbjct: 756  AVEAQ--------KILRGIPVTAQTGGTRTGVQP-DAVNRRASDIVRDLLQDKQFMAEIP 806


>ref|WP_009326767.1| pertussis toxin, subunit 1 [Streptomyces ipomoeae]
           gi|428663793|gb|EKX63129.1| pertussis toxin, subunit 1
           [Streptomyces ipomoeae 91-03]
          Length = 300

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 40/88 (45%), Positives = 50/88 (56%)
 Frame = +3

Query: 153 LPKVVYRGDSRSPAEIMASGGFISQGTKYDVFVEHMLGKVTDAHQSGYISTTTDLNVAQT 332
           LP VVYRGDSR P +I  S GF S+GT YD+   H+ G    AH SGYIST+   +VA+ 
Sbjct: 66  LPGVVYRGDSRHPNDIFNS-GFWSRGTNYDL-QAHVHG--DRAHNSGYISTSGSQSVAEQ 121

Query: 333 FAAPVGRSEYKPASWWPWTYPRKESEGW 416
           FA   G +    A+      PR +  GW
Sbjct: 122 FARSQGINNLDAAA----RQPRCQGAGW 145


>ref|WP_010351089.1| hypothetical protein [Streptomyces acidiscabies]
          Length = 294

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
 Frame = +3

Query: 153 LPKVVYRGDSRSPAEIMASGGFISQGTKYDVFVEHMLGKVTDAHQSGYISTTTDLNVAQT 332
           LP  VYRGDSR+P EI  + GF + GT YD+   H+ G+      SGYIST+ DL+ A+ 
Sbjct: 61  LPAQVYRGDSRTPYEIF-TNGFTAVGTNYDM-RSHLQGR----DGSGYISTSADLSQAER 114

Query: 333 FAAPVG-------------RSEYKPASWWP-----WTYPRKESEGWVY---------EXX 431
           FA+  G             R+    A+W P     WT   + +  WV             
Sbjct: 115 FASSQGGRNLGAAMANPSCRTGRPVATWTPFPGMGWTLTGQCTSSWVEADTYVYVIDSHM 174

Query: 432 XXXXXXFENEARTEYHVRMTSATKEWVAVRKINANKIVRATKYKRVFPLDREGRVTSFNG 611
                  +++ R +  ++     +EW  +  I+   I+    Y R+      G++   + 
Sbjct: 175 ARNALYTDDQVRGDVALQRFGGQQEWAYIHHIDRTAIIGVRVY-RMRERVVNGQLDYRSR 233

Query: 612 PFEKVEDWKNTGYSKTATGYDPYKD 686
            F       N  +++    YDP  D
Sbjct: 234 TFTYDRFVGNPHHAEARAAYDPSSD 258


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