BLASTX nr result
ID: Ephedra26_contig00013876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00013876
(684 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth... 205 9e-51
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth... 202 1e-49
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth... 202 1e-49
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ... 197 3e-48
ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [S... 193 4e-47
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth... 190 4e-46
gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| T... 189 5e-46
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth... 188 2e-45
ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synth... 188 2e-45
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth... 188 2e-45
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera] 188 2e-45
gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japo... 187 3e-45
ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group] g... 187 3e-45
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu... 187 3e-45
ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synth... 187 3e-45
emb|CBI15850.3| unnamed protein product [Vitis vinifera] 187 3e-45
gb|EMT32485.1| Putative tRNA pseudouridine synthase [Aegilops ta... 185 1e-44
gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus... 184 2e-44
gb|EMS58771.1| Putative tRNA pseudouridine synthase [Triticum ur... 184 2e-44
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus... 184 3e-44
>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
lycopersicum]
Length = 496
Score = 205 bits (522), Expect = 9e-51
Identities = 116/236 (49%), Positives = 146/236 (61%), Gaps = 9/236 (3%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESNFGNL K+GW RSSRTDKGVHSLAT+IS+K+EIP DAW D +G+ LA+ +N LP N
Sbjct: 90 ESNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPEN 149
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
IRVFS+LP + FDAR++C +RKY+YL+PAE+IGI +S EIE IA F DIL+SFEG
Sbjct: 150 IRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEG 209
Query: 362 RHPFHNYTVRAQYRKS-------KLNTLSK--RPKSQVEEASDDETSKLKTDDDLFEIDE 514
HPFHNYT+R++YRK K ++L K RP S+ EE S E EID
Sbjct: 210 EHPFHNYTIRSKYRKQSPARNLLKNDSLLKKGRPSSE-EEISGSE-----------EIDG 257
Query: 515 SREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
+ + Q + + + N V P+QARWLHEPD D
Sbjct: 258 EQNRKEQ----GVVTIVEAENQNAEGNCNLKVSHSKDLNSVIPIQARWLHEPDARD 309
>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
[Solanum tuberosum]
Length = 423
Score = 202 bits (513), Expect = 1e-49
Identities = 115/240 (47%), Positives = 146/240 (60%), Gaps = 13/240 (5%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
+SNFGNL K+GW RSSRTDKGVHSLAT+IS+K+EIP DAW D +G+ LA+ +N LP N
Sbjct: 30 DSNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPEN 89
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
IRVFS+LP + FDAR++C +RKY+YL+PAE+IGI +S EIE IA F DIL+SFEG
Sbjct: 90 IRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEG 149
Query: 362 RHPFHNYTVRAQYRKS-------KLNTLSK--RPKSQVE----EASDDETSKLKTDDDLF 502
HPFHNYT+R++YRK K +L K RP S+ E E SD E + +
Sbjct: 150 EHPFHNYTIRSKYRKQSPARNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTI 209
Query: 503 EIDESREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
E++ PE + + N V P+QARWLHEPD D
Sbjct: 210 VEAENQNPEGNCNEK--------------------VSHSKDLNSVIPIQARWLHEPDARD 249
>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Solanum tuberosum]
Length = 487
Score = 202 bits (513), Expect = 1e-49
Identities = 115/240 (47%), Positives = 146/240 (60%), Gaps = 13/240 (5%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
+SNFGNL K+GW RSSRTDKGVHSLAT+IS+K+EIP DAW D +G+ LA+ +N LP N
Sbjct: 94 DSNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPEN 153
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
IRVFS+LP + FDAR++C +RKY+YL+PAE+IGI +S EIE IA F DIL+SFEG
Sbjct: 154 IRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEG 213
Query: 362 RHPFHNYTVRAQYRKS-------KLNTLSK--RPKSQVE----EASDDETSKLKTDDDLF 502
HPFHNYT+R++YRK K +L K RP S+ E E SD E + +
Sbjct: 214 EHPFHNYTIRSKYRKQSPARNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTI 273
Query: 503 EIDESREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
E++ PE + + N V P+QARWLHEPD D
Sbjct: 274 VEAENQNPEGNCNEK--------------------VSHSKDLNSVIPIQARWLHEPDARD 313
>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 377
Score = 197 bits (500), Expect = 3e-48
Identities = 104/230 (45%), Positives = 150/230 (65%), Gaps = 3/230 (1%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
+SN+GNL+K+ W RSSRTDKGVHSLAT+ISMK+EIP +AW D +G+ LA+ +N +LP N
Sbjct: 98 DSNYGNLHKIAWARSSRTDKGVHSLATMISMKMEIPENAWKEDPNGIALAECVNYYLPDN 157
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
IR+FS+LP + FD R++C RKY+YLLPAE+IGI + EI+N I+ F DIL++FEG
Sbjct: 158 IRIFSILPSQKSFDPRRECNLRKYSYLLPAEIIGIKGHFTSAEIDNHISDFNDILNAFEG 217
Query: 362 RHPFHNYTVRAQYRKSKLNTLSKRPKSQVEEASDDETSKLKTDD--DLFEIDESREPEMQ 535
HPFHNYT+R++YRK ++ R + +S+ TS+ + D + +EID E+
Sbjct: 218 EHPFHNYTIRSKYRKQYPTAITGRVPKRARSSSERSTSESEKSDGEEDYEID-----EIN 272
Query: 536 VLDDN-AIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
+ D N +I + G++ + + I+ ARWL+EPD D
Sbjct: 273 IEDHNGSIQSSSKFRFSNQQKGGVLEQQQYNAGIL----ARWLYEPDETD 318
>ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [Sorghum bicolor]
gi|241921746|gb|EER94890.1| hypothetical protein
SORBIDRAFT_01g035980 [Sorghum bicolor]
Length = 520
Score = 193 bits (491), Expect = 4e-47
Identities = 107/233 (45%), Positives = 141/233 (60%), Gaps = 6/233 (2%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+G L KVGW RSSRTDKGVHSLAT+IS+K+EIP AW D DG+ LA +N +LP N
Sbjct: 121 ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDN 180
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
+RVFS+LP + FD R++C+ R+Y YLLPAEVIGI + PEEI+ +++F IL FEG
Sbjct: 181 VRVFSILPAQRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEG 240
Query: 362 RHPFHNYTVRAQYRK------SKLNTLSKRPKSQVEEASDDETSKLKTDDDLFEIDESRE 523
HPFHNYT RA+YRK + S KS E E+S L++ D+ +
Sbjct: 241 NHPFHNYTARAKYRKVLAGRHPRAKGASLTLKSMSSEMGMAESSSLESTSS----DDDED 296
Query: 524 PEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
+ +D A + + + + SE+ V +QARWLHEPD D
Sbjct: 297 LNISSIDSGASE-----------NIFVNDILKFSESRV-QIQARWLHEPDESD 337
>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria
vesca subsp. vesca]
Length = 509
Score = 190 bits (482), Expect = 4e-46
Identities = 105/234 (44%), Positives = 146/234 (62%), Gaps = 7/234 (2%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESNFGNLNK+ W RSSRTDKGVHSLAT+IS+K+EIP +AW GD G+ L + +N +LP +
Sbjct: 104 ESNFGNLNKISWARSSRTDKGVHSLATMISLKMEIPENAWDGDPYGIALVNHINSYLPRD 163
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS +P + FD RK+C R Y+YLLPA+VIGI + EIE+ IA F DIL++FEG
Sbjct: 164 IKVFSAVPAQRSFDPRKECNLRMYSYLLPADVIGIKSHFSAAEIEDHIADFNDILNAFEG 223
Query: 362 RHPFHNYTVRAQYR------KSKL-NTLSKRPKSQVEEASDDETSKLKTDDDLFEIDESR 520
HPFHNYT+R++YR KS + +SK +S VE +S + D+D F+ S
Sbjct: 224 EHPFHNYTIRSKYRMKLPGKKSPIYRNMSKTERSTVEASSSELEG--SDDEDKFKGRNSS 281
Query: 521 EPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
E E+ + + + V + ++++V A+WL+EPD D
Sbjct: 282 ETEVLNQNSSMSSNGNEILLHACKKQEDVLKEKSTDSVV---YAKWLYEPDESD 332
>gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| TPA: hypothetical
protein ZEAMMB73_241728 [Zea mays]
Length = 516
Score = 189 bits (481), Expect = 5e-46
Identities = 101/229 (44%), Positives = 139/229 (60%), Gaps = 2/229 (0%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+G L K+GW RSSRTDKGVHSLAT+IS+K+EIP AW D DG+ LA +N +LP N
Sbjct: 121 ESNYGKLQKIGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDN 180
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
+RVFS+LP + FD R++C+ R+Y YLLPAE+IGI ++ EE++ +++F IL FEG
Sbjct: 181 VRVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEG 240
Query: 362 RHPFHNYTVRAQYRK--SKLNTLSKRPKSQVEEASDDETSKLKTDDDLFEIDESREPEMQ 535
HPFHNYT RA+YRK + + +K S ++ S D + ++ D + +
Sbjct: 241 NHPFHNYTARAKYRKVLAGRHRRAKGASSALKSMSSDTGMAESSSEESTSPDHDEDLNIS 300
Query: 536 VLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
+ D+ I GI+ +E I QARWLHEPD D
Sbjct: 301 SIFDSGIPEDTRVN-------GILKLSEDRLQI----QARWLHEPDESD 338
>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
[Citrus sinensis]
Length = 539
Score = 188 bits (477), Expect = 2e-45
Identities = 106/236 (44%), Positives = 139/236 (58%), Gaps = 9/236 (3%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+GNL K+ W RSSRTDKGVHSLAT+I +K+EIP DAW D G+ LA ++N HLP N
Sbjct: 122 ESNYGNLQKIAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRN 181
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS+LP + FD R++C RKY+YLLPAEVIGIN EI++ I+ F IL+ FEG
Sbjct: 182 IKVFSILPSQRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEG 241
Query: 362 RHPFHNYTVRAQYRKS--KLNTLSKRPK-------SQVEEASDDETSKLKTDDDLFEIDE 514
HPFHNYT R++YR+ K +SKR K S+VEE+ +E K ++ E D
Sbjct: 242 EHPFHNYTERSKYRRKPHKTGCVSKRAKASKDAVFSRVEESEGEEDGFSKVEESDGEEDL 301
Query: 515 SREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
E+ D+ A +N ++ARWL+E D D
Sbjct: 302 GIGGEISSDDEKANQNSMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDEAD 357
>ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Citrus sinensis] gi|568827612|ref|XP_006468145.1|
PREDICTED: putative tRNA pseudouridine synthase-like
isoform X2 [Citrus sinensis]
gi|568827614|ref|XP_006468146.1| PREDICTED: putative
tRNA pseudouridine synthase-like isoform X3 [Citrus
sinensis]
Length = 605
Score = 188 bits (477), Expect = 2e-45
Identities = 106/236 (44%), Positives = 139/236 (58%), Gaps = 9/236 (3%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+GNL K+ W RSSRTDKGVHSLAT+I +K+EIP DAW D G+ LA ++N HLP N
Sbjct: 188 ESNYGNLQKIAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRN 247
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS+LP + FD R++C RKY+YLLPAEVIGIN EI++ I+ F IL+ FEG
Sbjct: 248 IKVFSILPSQRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEG 307
Query: 362 RHPFHNYTVRAQYRKS--KLNTLSKRPK-------SQVEEASDDETSKLKTDDDLFEIDE 514
HPFHNYT R++YR+ K +SKR K S+VEE+ +E K ++ E D
Sbjct: 308 EHPFHNYTERSKYRRKPHKTGCVSKRAKASKDAVFSRVEESEGEEDGFSKVEESDGEEDL 367
Query: 515 SREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
E+ D+ A +N ++ARWL+E D D
Sbjct: 368 GIGGEISSDDEKANQNSMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDEAD 423
>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
vinifera]
Length = 564
Score = 188 bits (477), Expect = 2e-45
Identities = 108/237 (45%), Positives = 148/237 (62%), Gaps = 10/237 (4%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
+SN+GNL+K+GW RSSRTDKGVHSLAT+IS+K+EIP +AW D +G+ LA+ +N HLP N
Sbjct: 107 DSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNN 166
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS+LP + FDAR++C R+Y+YLLPAE+IGI NS EI++ IA+F DIL++FEG
Sbjct: 167 IKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEG 226
Query: 362 RHPFHNYTVRAQYRKSKLNTLS-------KRPKSQVE-EASDDETSKLKTDDDLFEIDES 517
HPF NYT+R++YRK S +R KS E S+ E S + + + + S
Sbjct: 227 EHPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISS 286
Query: 518 --REPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
E E Q ++ G+ E S +V ++ARWLH PD D
Sbjct: 287 DYDEGENQNSSESTSFVEHPVGSSNNNEKGL---KEQSPKLV--VRARWLHGPDERD 338
>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
Length = 602
Score = 188 bits (477), Expect = 2e-45
Identities = 108/237 (45%), Positives = 148/237 (62%), Gaps = 10/237 (4%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
+SN+GNL+K+GW RSSRTDKGVHSLAT+IS+K+EIP +AW D +G+ LA+ +N HLP N
Sbjct: 107 DSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNN 166
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS+LP + FDAR++C R+Y+YLLPAE+IGI NS EI++ IA+F DIL++FEG
Sbjct: 167 IKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEG 226
Query: 362 RHPFHNYTVRAQYRKSKLNTLS-------KRPKSQVE-EASDDETSKLKTDDDLFEIDES 517
HPF NYT+R++YRK S +R KS E S+ E S + + + + S
Sbjct: 227 EHPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGVNGVISS 286
Query: 518 --REPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
E E Q ++ G+ E S +V ++ARWLH PD D
Sbjct: 287 DYDEGENQNSSESTSFVEHPVGSSNNNEKGL---KEQSSKLV--VRARWLHGPDERD 338
>gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japonica Group]
Length = 516
Score = 187 bits (475), Expect = 3e-45
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 9/236 (3%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+G L KVGW RSSRTDKGVHSLAT+IS+K+EIP AW D DG+ L++ +N +LP N
Sbjct: 116 ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDN 175
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
+RVFSVLP + FD R++C+ R+Y YLLPAE+IGI EE+ +++F IL FEG
Sbjct: 176 VRVFSVLPAQRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEG 235
Query: 362 RHPFHNYTVRAQYRK------SKLNTLSKRPKSQVEEASDDETSK---LKTDDDLFEIDE 514
HPFHNYT RA+YRK K+ S S E S D++S +D D +++
Sbjct: 236 NHPFHNYTARAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSSDDGTTSDHDEEDLNS 295
Query: 515 SREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
S V +D+ D E SE V ++ARWLHEPD +D
Sbjct: 296 SSIIGSSVPEDSYKD-----------------NPEFSEKQV-QIRARWLHEPDEND 333
>ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group]
gi|108708043|gb|ABF95838.1| tRNA pseudouridine synthase
family protein, expressed [Oryza sativa Japonica Group]
gi|113548527|dbj|BAF11970.1| Os03g0338600 [Oryza sativa
Japonica Group]
Length = 516
Score = 187 bits (475), Expect = 3e-45
Identities = 107/236 (45%), Positives = 140/236 (59%), Gaps = 9/236 (3%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+G L KVGW RSSRTDKGVHSLAT+IS+K+EIP AW D DG+ L++ +N +LP N
Sbjct: 116 ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDN 175
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
+RVFSVLP + FD R++C+ R+Y YLLPAE+IGI EE+ +++F IL FEG
Sbjct: 176 VRVFSVLPAQRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEG 235
Query: 362 RHPFHNYTVRAQYRK------SKLNTLSKRPKSQVEEASDDETSK---LKTDDDLFEIDE 514
HPFHNYT RA+YRK K+ S S E S D++S +D D +++
Sbjct: 236 NHPFHNYTARAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSSDDGTTSDHDEEDLNS 295
Query: 515 SREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
S V +D+ D E SE V ++ARWLHEPD +D
Sbjct: 296 SSIIGSSVPEDSYKD-----------------NPEFSEKQV-QIRARWLHEPDEND 333
>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
gi|550325882|gb|EEE95884.2| hypothetical protein
POPTR_0013s15030g [Populus trichocarpa]
Length = 505
Score = 187 bits (474), Expect = 3e-45
Identities = 107/230 (46%), Positives = 145/230 (63%), Gaps = 3/230 (1%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+GNLNK+ W RSSRTDKGVHSLAT I+MK+EIP +AW DL G+VLA +N +LP +
Sbjct: 120 ESNYGNLNKISWARSSRTDKGVHSLATTITMKMEIPENAWKDDLYGMVLAKHVNSYLPDS 179
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
IRV S+LP + FD R++C RKY+YLLPAEVIGI + EI++ I+ F +IL++FEG
Sbjct: 180 IRVLSILPAQKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMAEIDDHISDFNNILNAFEG 239
Query: 362 RHPFHNYTVRAQYRK---SKLNTLSKRPKSQVEEASDDETSKLKTDDDLFEIDESREPEM 532
HPFHNYTVR++YR+ +K +SKR +S TS ++++ E+ ++ E
Sbjct: 240 DHPFHNYTVRSKYRRKYPTKNGHVSKRARSSW------GTSASGSEENHVELSQN-SLES 292
Query: 533 QVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
+ D N G + + S PL+ARWLHEPD D
Sbjct: 293 SICDLN----------------GDILKDQSSN---LPLRARWLHEPDETD 323
>ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synthase-like [Brachypodium
distachyon]
Length = 522
Score = 187 bits (474), Expect = 3e-45
Identities = 105/241 (43%), Positives = 141/241 (58%), Gaps = 14/241 (5%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+G L KVGW RSSRTDKGVHSLAT+IS+K+EIP AW D DG+ LA+ +N +LP N
Sbjct: 121 ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALANFINSNLPNN 180
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS+LP + FD R++C+ R+Y YLLPAE+IGI EE+E + +F IL FEG
Sbjct: 181 IKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSGCSSEEVEEHLIEFNSILKGFEG 240
Query: 362 RHPFHNYTVRAQYR----------KSKLNTLSKRPKS-QVEEASDDETSKLKTDDD---L 499
HPFHNYT RA+YR K +T++ P V+++ +D+ + DD+
Sbjct: 241 NHPFHNYTARAKYRKVLAGAHRRSKETSSTINSIPSELAVDQSPNDDGATSDADDEHLNF 300
Query: 500 FEIDESREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMH 679
+ +S PE DN + EN V +QARWLHEP+ +
Sbjct: 301 SSVVDSSLPENDWNKDN---------------------PKHHENHV-QIQARWLHEPNEN 338
Query: 680 D 682
D
Sbjct: 339 D 339
>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 187 bits (474), Expect = 3e-45
Identities = 105/234 (44%), Positives = 142/234 (60%), Gaps = 7/234 (2%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
+SN+GNL+K+GW RSSRTDKGVHSLAT+IS+K+EIP +AW D +G+ LA+ +N HLP N
Sbjct: 107 DSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNN 166
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS+LP + FDAR++C R+Y+YLLPAE+IGI NS EI++ IA+F DIL++FEG
Sbjct: 167 IKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEG 226
Query: 362 RHPFHNYTVRAQYRKSKLNTLS-------KRPKSQVEEASDDETSKLKTDDDLFEIDESR 520
HPF NYT+R++YRK S +R KS V + DE + + +
Sbjct: 227 EHPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSVISSDYDEGENQNSSESTSFV---- 282
Query: 521 EPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
E V N + E S +V ++ARWLH PD D
Sbjct: 283 --EHPVGSSNNNEKG---------------LKEQSPKLV--VRARWLHGPDERD 317
>gb|EMT32485.1| Putative tRNA pseudouridine synthase [Aegilops tauschii]
Length = 429
Score = 185 bits (470), Expect = 1e-44
Identities = 105/234 (44%), Positives = 139/234 (59%), Gaps = 7/234 (2%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+G L KVGW RSSRTDKGVHSLAT+IS+K+EIP AW D DG+ LA+ +N +LP N
Sbjct: 28 ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEKDPDGIALANFINSNLPDN 87
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS+LP + FD R++C+ R+Y YLLPAE+IGI + E+E + +F +IL FEG
Sbjct: 88 IKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSSGEVEEHLIEFNNILKGFEG 147
Query: 362 RHPFHNYTVRAQYRKSKLNTLSKRPKSQV-------EEASDDETSKLKTDDDLFEIDESR 520
HPFHNYT RA+YRK + ++ E +D TS T D IDE
Sbjct: 148 NHPFHNYTARAKYRKVLAGAHRRAKETSTTAHSIPFEMVADQSTSGDGTTSD---IDEEY 204
Query: 521 EPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
+LD +A + + E E+ V +QARWLHEP+ +D
Sbjct: 205 LNSPSILDSSAPEDNCK-----------MDNPELPESRV-QIQARWLHEPNDND 246
>gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
Length = 512
Score = 184 bits (468), Expect = 2e-44
Identities = 109/242 (45%), Positives = 145/242 (59%), Gaps = 15/242 (6%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
+SNFG+LNKV W RSSRTDKGVHSLATVIS K+EIP +AW GD G+ LA+++N +LPY
Sbjct: 114 DSNFGDLNKVKWGRSSRTDKGVHSLATVISFKMEIPENAWKGDDYGIALANRINSYLPYT 173
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
IRVFS+LP ++ FD R++C RKY+YLLPA++IGI + +EI+ I++F IL+ FEG
Sbjct: 174 IRVFSILPSTKRFDPRRECNLRKYSYLLPADIIGIQSHFSKDEIDFHISEFNSILNVFEG 233
Query: 362 RHPFHNYTVRAQYRK-------SKLNTLSKRPKSQ-----VEEASDDETSKLKTDDD--- 496
HPFHNYTVR++YRK S + +S R S E SDD D
Sbjct: 234 EHPFHNYTVRSKYRKKYQVRQSSGSDVMSDRLGSSSLASGFESESDDSDDYDFVDGSPTT 293
Query: 497 LFEIDESREPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDM 676
L + +ES +P + + N + S+N ++ARWLHEPD
Sbjct: 294 LSDKEESHKPP-ESSESNGLS---------------------SQNSNVVVRARWLHEPDE 331
Query: 677 HD 682
D
Sbjct: 332 KD 333
>gb|EMS58771.1| Putative tRNA pseudouridine synthase [Triticum urartu]
Length = 450
Score = 184 bits (468), Expect = 2e-44
Identities = 105/234 (44%), Positives = 139/234 (59%), Gaps = 7/234 (2%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESN+G L KVGW RSSRTDKGVHSLAT+IS+K+EIP AW D DG+ LA+ +N +LP N
Sbjct: 49 ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEKDPDGIALANFINSNLPDN 108
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+VFS+LP + FD R++C+ R+Y YLLPAE+IGI + E+E + +F +IL FEG
Sbjct: 109 IKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSSGEVEEHLIEFNNILKCFEG 168
Query: 362 RHPFHNYTVRAQYRKSKLNTLSKRPKSQV-------EEASDDETSKLKTDDDLFEIDESR 520
HPFHNYT RA+YRK + ++ E +D TS T D IDE
Sbjct: 169 NHPFHNYTARAKYRKVLAGAHRRAKETSTTAHSIPSEMVADKSTSGDGTTSD---IDEEY 225
Query: 521 EPEMQVLDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVPPLQARWLHEPDMHD 682
+LD +A + + E E+ V +QARWLHEP+ +D
Sbjct: 226 LNSPSILDSSAPEDNCN-----------MDNPELPESHV-QIQARWLHEPNDND 267
>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
Length = 507
Score = 184 bits (466), Expect = 3e-44
Identities = 102/234 (43%), Positives = 143/234 (61%), Gaps = 7/234 (2%)
Frame = +2
Query: 2 ESNFGNLNKVGWTRSSRTDKGVHSLATVISMKLEIPIDAWVGDLDGLVLADKLNVHLPYN 181
ESNFG+L K+ W RSSRTDKGVHSLAT++S K+EIP +AW GD G LA+ +N +LP++
Sbjct: 104 ESNFGDLQKIKWARSSRTDKGVHSLATIVSFKMEIPENAWNGDPYGFGLANYVNSYLPFD 163
Query: 182 IRVFSVLPVSQDFDARKKCISRKYTYLLPAEVIGINENSLPEEIENCIAKFRDILSSFEG 361
I+V S+LP + FD RK+C RKY+YLLPAE+IGI +S +EI+ I++F DIL+ FEG
Sbjct: 164 IKVLSILPSQRSFDPRKECAWRKYSYLLPAEIIGIQSDSSNDEIDYHISEFHDILNVFEG 223
Query: 362 RHPFHNYTVRAQYRKSKLNTLSKRPKSQVEEASDDETS-KLKTDDDLFEIDESREPEMQV 538
HPFHNYT RA+YRK N + VE E+ + +++ FEIDE+ ++
Sbjct: 224 EHPFHNYTARAKYRKHFPN--KQLSSKSVERLPPYESECEYSDEEENFEIDEAFTENIEC 281
Query: 539 LDDNAIDXXXXXXXXXXXRLGIVTTTEGSENIVP------PLQARWLHEPDMHD 682
+ +V ++ + N +P +ARWL+EPD D
Sbjct: 282 RSQKCSETHNFGKP-------VVGSSNKNGNRLPGQDSRLVARARWLYEPDEAD 328