BLASTX nr result
ID: Ephedra26_contig00013870
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00013870
(2207 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A... 399 e-137
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare] 387 e-135
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S... 379 e-134
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 379 e-133
ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea ma... 364 e-130
ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-li... 374 e-130
ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-li... 370 e-130
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 360 e-129
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 370 e-129
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li... 360 e-129
gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi... 370 e-128
gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japo... 370 e-128
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 352 e-128
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao] 351 e-127
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei... 352 e-125
gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis] 370 e-124
ref|XP_001772028.1| predicted protein [Physcomitrella patens] gi... 339 e-124
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li... 350 e-123
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr... 350 e-123
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe... 343 e-123
>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
gi|548862999|gb|ERN20355.1| hypothetical protein
AMTR_s00066p00201540 [Amborella trichopoda]
Length = 628
Score = 399 bits (1025), Expect(2) = e-137
Identities = 209/459 (45%), Positives = 304/459 (66%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLDG KVQ++ +DGFLHHLQN+QK + EE + H YSSNDV++LL E+ + E+ + T
Sbjct: 52 QLDGSKVQNAHVDGFLHHLQNKQKHNILKEESNVHMYSSNDVNMLLGEEHKDGEEGMLDT 111
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
P+KQS + + S +S+ +++P ++ +TPF R+++F++Q
Sbjct: 112 PIKQSYFDNLNDLSTPISM--DRSPERNG---KSISEKSSRRTSSQATPFGQRTNKFLLQ 166
Query: 1846 FVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLS 1667
N K+ D+++R+V I CSL+V G P GFR+M +ED+F +
Sbjct: 167 LSFNSHSKADDTKDLEIDALGDDVIRRVQDIESCSLQVQGSWPKPGFRFMYDKVEDRFNA 226
Query: 1666 LEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFS 1487
LE RI+ ++AL A+ C LA+ +++ V ++CC+G+G+LND+S+L +GS E S
Sbjct: 227 LENRIRRLSSALVASGECGEPSDATLASQKTLFSVGMVCCDGEGRLNDKSILFQGSVEHS 286
Query: 1486 SGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLA 1307
G RVRLDL+ L++ S+F GQVIG+EGHN SGHC +AS+++DS+P+ S +D P A
Sbjct: 287 GGQRVRLDLKNLVQFSLFPGQVIGIEGHNPSGHCFIASKLVDSFPLIGSSDLD---LPPA 343
Query: 1306 KRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILMG 1127
K+ D + A+K R +S++IAAGP +TTDNL F+PL ELL+Y+R+K +LILMG
Sbjct: 344 KKQATDQNGE-PATKASR-ELSIVIAAGPLSTTDNLLFEPLTELLAYARRKQPQLLILMG 401
Query: 1126 PFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVFP 947
PFVD++HP+IK+GTID+ F +VF E++ +L DYC MGP AR++LVPSTRDAH+DFVFP
Sbjct: 402 PFVDTEHPKIKKGTIDESFAEVFQEEILNKLHDYCAHMGPAARIVLVPSTRDAHNDFVFP 461
Query: 946 QPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
QP FE + QITC+ANPG+L NEI +G CT D+
Sbjct: 462 QPPFEIYPSTDPDQQITCLANPGVLISNEITIGCCTADV 500
Score = 120 bits (300), Expect(2) = e-137
Identities = 65/138 (47%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Frame = -1
Query: 827 LSSEEISRNSGGKTN-DRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EE+SR S + DR+ RL +H++ QR FYP+YP + G+PLD +PEAL + PD
Sbjct: 504 LSGEEVSRMSTDALSIDRIGRLVSHVIKQRCFYPVYPPSVGLPLDFSIAPEALHMASIPD 563
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNE-NKCVSINPGRLAKGASGGTFAEILIQEREQSYNQ 474
+L++PSDLAPF K L GE T + ++C+ INPGRLAKG SGGTF E+ SY
Sbjct: 564 LLLMPSDLAPFIKALPFGEGSDTEKYSRCLCINPGRLAKGVSGGTFVEL-------SYLN 616
Query: 473 NENLTSLDEKTAVSIVRL 420
N ++T+ SI+R+
Sbjct: 617 N------PDQTSASIIRI 628
>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 387 bits (994), Expect(2) = e-135
Identities = 212/467 (45%), Positives = 289/467 (61%), Gaps = 8/467 (1%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLDG KV+SS +DGFL HLQNE KE L EE D H YSSNDVD+LL+ + +EE +L
Sbjct: 57 QLDGLKVESSYLDGFLSHLQNEVKEKLIKEETDLHIYSSNDVDMLLSNTHTDEEGILDTP 116
Query: 2026 PVKQSNGFSQQNASDFL--------SILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLN 1871
KQ + S+ SI A KT G TPF
Sbjct: 117 STKQEKPHVDSSNSELTPLTTERPSSIRAAKTNGD------------------RITPFAQ 158
Query: 1870 RSSRFVVQFVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNA 1691
R ++F +VLN D + S+ + SEDEL+R++ +C+L+V P G R+M
Sbjct: 159 RVNKFTQHYVLNADNVASVPSKDEVETSEDELIRRIQPSQKCTLQVQRSKPEPGCRFMYD 218
Query: 1690 SIEDKFLSLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVL 1511
+ED+F LE RI A +A C LA+ E++ V ++ C+G+G+LN++S+L
Sbjct: 219 RMEDRFNYLEGRIGRSARLFSATGLCGQPADATLASEENMFAVGMVICDGEGRLNEKSIL 278
Query: 1510 LEGSAEFSSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQM 1331
L+GS E S G RVRLDL+ + + S+F GQV+G+EGHN SGHC VAS++IDS P+SV Q+
Sbjct: 279 LQGSVEHSRGQRVRLDLKDINQFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVSVDDQL 338
Query: 1330 DDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKN 1151
P AK+ +D + N++ R +S +IAAGPFTTTDNL F+PL+ELLSY+ +K
Sbjct: 339 -----PCAKKQAVDHEGHQNSNTLSRV-LSSVIAAGPFTTTDNLLFEPLQELLSYACRKQ 392
Query: 1150 FNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRD 971
+LILMGPF+DS HP+IK+GT D+ F D+F ++ +L+D+ +G N RVILVPS RD
Sbjct: 393 PQLLILMGPFIDSDHPEIKKGTSDQSFHDIFRFEILRKLQDFTQYLGYNVRVILVPSVRD 452
Query: 970 AHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
AHHD VFPQPAF+ H + ++ QITC++NP L NEI G CT+DI
Sbjct: 453 AHHDTVFPQPAFDLHLPEDITQQITCLSNPSLFSSNEIQFGCCTVDI 499
Score = 124 bits (310), Expect(2) = e-135
Identities = 62/112 (55%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = -1
Query: 827 LSSEEISRNS-GGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS +EISR GGK DR+ RLA HI+ Q+S+YPLYP A+GVP+D + EAL+I APD
Sbjct: 503 LSGDEISRKPPGGKAADRIGRLATHIVKQQSYYPLYPPAAGVPMDFSLAKEALEIPSAPD 562
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQE 495
+L+LPSDLAP KVL + ED + + + + +NPGRLAKG GGTF E+ E
Sbjct: 563 VLLLPSDLAPSVKVLSVNEDTE-EQKRFICVNPGRLAKGIGGGTFVELYYNE 613
>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
gi|241916387|gb|EER89531.1| hypothetical protein
SORBIDRAFT_10g009040 [Sorghum bicolor]
Length = 626
Score = 379 bits (972), Expect(2) = e-134
Identities = 206/461 (44%), Positives = 293/461 (63%), Gaps = 2/461 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQH- 2030
QLDG K++SS +DGFL HLQNE KE + EE + H YSSNDVD+LL+ N + ++V H
Sbjct: 57 QLDGLKLESSYLDGFLSHLQNEVKERIIKEEANLHIYSSNDVDMLLS--NSHADEVAFHD 114
Query: 2029 TPVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVV 1850
TP + +++++ L+ L + P TPF R ++F
Sbjct: 115 TPGSKQEKPPEESSNSELTPLTSDRPSSS---------RVAKTNADRITPFATRVNKFTQ 165
Query: 1849 QFVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFL 1670
Q+VLN D S+ + E +EDE++R++ RCSL+V P G R+M +ED+F
Sbjct: 166 QYVLNADNAVSVPSKNAEI-TEDEVIRRIQPSQRCSLQVQRSQPEPGCRFMYDRMEDRFN 224
Query: 1669 SLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEF 1490
LE RI+ A+ +A+ C LA+ E + V + C+G+G LN++S+LL+GS +
Sbjct: 225 YLEDRIRKSASLFSASGFCGQPADATLASEEKMFAVGTVACDGEGHLNEKSILLQGSVQH 284
Query: 1489 SSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPL 1310
S G RVRLDL+ L S+F GQV+G+EGHN SGHC VAS++IDS P+SV +Q+ P
Sbjct: 285 SRGQRVRLDLKDLDHFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVSVDAQL-----PS 339
Query: 1309 AKRITIDPKSQINASK-TPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILIL 1133
AK+ ID +S N+ T +S +IAAGP+TTTDNL F+PL+ELLSY+ +K +LIL
Sbjct: 340 AKKQAIDNESNQNSDAGTLSRALSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLIL 399
Query: 1132 MGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFV 953
MGPF+DS HP IK+GT+D+ F D+F ++ +++D+ +G RVIL+PS RDAHHDFV
Sbjct: 400 MGPFIDSDHPDIKKGTVDQSFHDIFHFEILRKIQDFTQYLGNTVRVILIPSVRDAHHDFV 459
Query: 952 FPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
FPQPAF+ ++ + ++ QITC+ANP L NEI G CT+DI
Sbjct: 460 FPQPAFDLNFPEDITHQITCLANPCLFSSNEIHFGCCTVDI 500
Score = 129 bits (324), Expect(2) = e-134
Identities = 72/137 (52%), Positives = 92/137 (67%), Gaps = 1/137 (0%)
Frame = -1
Query: 827 LSSEEISRNSG-GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EEISR GK DR+ RLA+HIL Q+S+YPLYP+A+GVPLD + EAL+I APD
Sbjct: 504 LSGEEISRKPPVGKPADRIGRLASHILKQQSYYPLYPSAAGVPLDFSLAKEALEISSAPD 563
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQN 471
+L+LPSDLAPF KVL LGE ++ + + +NPGRLAKG GGTF E+ YN+
Sbjct: 564 VLLLPSDLAPFVKVLSLGEG-SDDQKRFICVNPGRLAKGIGGGTFVELY-------YNEG 615
Query: 470 ENLTSLDEKTAVSIVRL 420
+KT SI+R+
Sbjct: 616 ------IDKTNASIIRI 626
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 379 bits (972), Expect(2) = e-133
Identities = 208/460 (45%), Positives = 292/460 (63%), Gaps = 1/460 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLD V ++ MDGFL HLQNEQKE + EEP H YSSNDVD++L+ E++ ++ + T
Sbjct: 54 QLDESVVGNALMDGFLLHLQNEQKEAVIKEEPHLHIYSSNDVDMILSDEHEEIKEDILGT 113
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
P +S + +A F S A +T G + TPF R+S+FVVQ
Sbjct: 114 PSDRSG---RHHADPFDS--AQRTNGNSSSYGKPSNHV---------TPFGKRTSKFVVQ 159
Query: 1846 FVLNRDV-LDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFL 1670
+N ++ + E +D+++R+V RCSL V G P G R+M IED+F
Sbjct: 160 LTVNNPPSAENGKNENKFENVDDDIIRRVQPSKRCSLLVHGSRPGPGCRFMYDRIEDRFN 219
Query: 1669 SLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEF 1490
SLE RIK TAL A +A+ +S+ +ICC+G+G+LN++S+LL+ S +
Sbjct: 220 SLENRIKKHTTALVATGLYKEPTDPTVASQKSVFATGMICCDGEGRLNEKSILLQSSVQH 279
Query: 1489 SSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPL 1310
S G RVRLDL KL + S+F GQV+G+EGHN SGHCL+AS+++DS P+S P+ +D
Sbjct: 280 SGGQRVRLDLSKLNQFSIFPGQVVGIEGHNPSGHCLIASKILDSIPVSAPTDVD---LHP 336
Query: 1309 AKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILM 1130
AK+ D + Q S +S+++AAGPFTTTDNL F+PL ELL+Y+R+K +LIL+
Sbjct: 337 AKKQARDEEFQSADSSHKLAELSLMVAAGPFTTTDNLLFEPLTELLAYARRKMPQLLILL 396
Query: 1129 GPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVF 950
GPFVDS+HP+I++GT+D+ F ++F ++ RL+DY + MG ARVILVPS RDA+HDFVF
Sbjct: 397 GPFVDSEHPEIRKGTVDRSFDEIFHLEILRRLQDYVEYMGSAARVILVPSIRDANHDFVF 456
Query: 949 PQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
PQPAF H D + QIT + NPG+ NE+ VG CT+D+
Sbjct: 457 PQPAFSIHPPD-LKHQITSLTNPGMFDANEVKVGCCTVDV 495
Score = 125 bits (315), Expect(2) = e-133
Identities = 68/138 (49%), Positives = 88/138 (63%), Gaps = 2/138 (1%)
Frame = -1
Query: 827 LSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS E ISRN + G + DR++ +A HIL+QRSFYPLYP A G+PLD +PEAL++ PD
Sbjct: 499 LSGEMISRNPTDGSSRDRMTTIANHILSQRSFYPLYPLAEGIPLDFSLAPEALEVSTIPD 558
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNE-NKCVSINPGRLAKGASGGTFAEILIQEREQSYNQ 474
+LILPSDLA F KVL LG + E KC+ +NPGRLAKG GG F E+
Sbjct: 559 VLILPSDLASFVKVLSLGGRNEGEELVKCICVNPGRLAKGEGGGHFVEL----------- 607
Query: 473 NENLTSLDEKTAVSIVRL 420
N +KT+ S++R+
Sbjct: 608 --NYQGSPDKTSASVIRI 623
>ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
gi|194689050|gb|ACF78609.1| unknown [Zea mays]
gi|413916526|gb|AFW56458.1| hypothetical protein
ZEAMMB73_686460 [Zea mays]
Length = 626
Score = 364 bits (935), Expect(2) = e-130
Identities = 206/460 (44%), Positives = 284/460 (61%), Gaps = 1/460 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLDG K++SS +DGFL HLQNE K+ + EE + H YSSNDVD+LL+ + +E T
Sbjct: 57 QLDGLKLESSYLDGFLSHLQNEVKDRIIKEEANLHIYSSNDVDMLLS-NSHVDEAAFHDT 115
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
P G+ Q+ A + SI + TP D TPF R ++F Q
Sbjct: 116 P-----GYEQEKAPEGSSI-SELTPLASD---RPSSSRVAKTNADRITPFATRVNKFTQQ 166
Query: 1846 FVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLS 1667
+VLN D + + E +EDE++R+V RC L+V P G R+M +ED+F
Sbjct: 167 YVLNADNAVGVPSKSAEI-TEDEIIRRVQPSQRCYLQVQRSQPEPGCRFMYDRMEDRFNY 225
Query: 1666 LEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFS 1487
LE RI+ A+ +A+ C LA+ E + V + C+G+G LN++S+LL+GS E S
Sbjct: 226 LEDRIRKSASLFSASGFCGQPADATLASEEKMFAVGTVACDGEGHLNEKSILLQGSVEHS 285
Query: 1486 SGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLA 1307
G VRLDL+ L S+F GQV+G+EGHN SGHC VAS++ DS P+SV +Q+ P A
Sbjct: 286 RGQCVRLDLKDLDHFSLFPGQVVGIEGHNPSGHCFVASKLFDSIPVSVDAQL-----PSA 340
Query: 1306 KRITIDPKSQINASK-TPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILM 1130
K+ ID +S N+ T +S +IAAGP+TTTDN+ F+PL+ELLSY+ +K +LILM
Sbjct: 341 KKQAIDNESNQNSDAGTLSRALSSIIAAGPYTTTDNMLFEPLQELLSYACRKPPQLLILM 400
Query: 1129 GPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVF 950
GPF+DS HP IK+GTID+ F D+F +V +++D+ +G RVIL+PS RDAHHDFVF
Sbjct: 401 GPFIDSDHPDIKKGTIDQSFHDIFHFEVLRKIQDFTQYLGNTVRVILIPSVRDAHHDFVF 460
Query: 949 PQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
PQPAF+ + + + QIT +ANP L NEI G CT+DI
Sbjct: 461 PQPAFDLNLLEDTTHQITSLANPCLFGSNEINFGCCTVDI 500
Score = 131 bits (330), Expect(2) = e-130
Identities = 73/137 (53%), Positives = 92/137 (67%), Gaps = 1/137 (0%)
Frame = -1
Query: 827 LSSEEISRNS-GGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS +EISR GGK DR+ RLA+HIL Q+S+YPLYP A GVPLDL + EAL+I APD
Sbjct: 504 LSGQEISRKPPGGKPGDRIGRLASHILKQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPD 563
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQN 471
+L+LPSDLAPF KVL LGE ++ + + +NPGRLAKG GGTF E+ YN+
Sbjct: 564 VLLLPSDLAPFVKVLSLGEG-SDDDRRFICVNPGRLAKGIGGGTFVELY-------YNEG 615
Query: 470 ENLTSLDEKTAVSIVRL 420
+KT SI+R+
Sbjct: 616 ------IDKTNASIIRI 626
>ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
distachyon]
Length = 625
Score = 374 bits (960), Expect(2) = e-130
Identities = 199/459 (43%), Positives = 284/459 (61%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLDG KV+SS +DGFL HLQNE K+ L EE D H YSSND+D+LLN EE L
Sbjct: 57 QLDGLKVESSYLDGFLTHLQNEVKDKLIKEETDLHVYSSNDIDMLLNNALTEEEGFLDTP 116
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
K + + S+ + ++ TPF R ++F
Sbjct: 117 STKLEKSHGEPSNSELTPLTTDRPSSS----------RAAKTNGDRITPFAQRVNKFAQH 166
Query: 1846 FVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLS 1667
+VLN D + ++ + SEDEL+R+V RC+L+V P G R+M +ED+F
Sbjct: 167 YVLNADDMANVPSKPEVETSEDELIRRVQPRQRCTLQVQRSHPEPGCRFMYDRMEDRFNY 226
Query: 1666 LEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFS 1487
LE RI++ A+ +A C LA+ +++ V ++ C+G+G+LN++S+LL+GS E S
Sbjct: 227 LEDRIRSSASLFSATGLCGEPADATLASEDNMFAVGMVICDGEGRLNEKSILLQGSVEHS 286
Query: 1486 SGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLA 1307
G RVRLDL+ + + S+F GQV+G+EGHN SGHC VAS++IDS P+ V Q+ P +
Sbjct: 287 RGQRVRLDLKDINEFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVPVDDQL-----PCS 341
Query: 1306 KRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILMG 1127
K+ +D + + N++ R +S +IAAGP+TTTDNL F+PL+ELLSY+ +K +LILMG
Sbjct: 342 KKQALDDEGRQNSNTLSRV-LSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMG 400
Query: 1126 PFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVFP 947
PF+DS HP IK GT+D+ F D+F ++ +L+D+ +G + RVILVPS RDAHHD VFP
Sbjct: 401 PFIDSDHPDIKRGTVDQSFHDIFHFEILRKLQDFTQYLGHSVRVILVPSVRDAHHDTVFP 460
Query: 946 QPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
QPAF+ + + ++ QITC+ANP + NEI G CT DI
Sbjct: 461 QPAFDLNLPEDITHQITCLANPSIFSSNEIHFGCCTTDI 499
Score = 121 bits (304), Expect(2) = e-130
Identities = 64/118 (54%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Frame = -1
Query: 827 LSSEEISRNS-GGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS +EISR GGK DR+ RLA HIL Q+S+YPLYP A+GVP+D + EA +I PD
Sbjct: 503 LSGDEISRKPPGGKPADRIGRLAKHILKQQSYYPLYPPAAGVPMDFSLAKEAFEISSPPD 562
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYN 477
+L+LPSDLAPF KVL L E + + V +NPGRLAKG GGTF E+ E N
Sbjct: 563 VLLLPSDLAPFVKVLSLNEGAE-EQKWFVCVNPGRLAKGIGGGTFVELYYNEDTDKTN 619
>ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-like [Setaria italica]
Length = 627
Score = 370 bits (949), Expect(2) = e-130
Identities = 201/462 (43%), Positives = 284/462 (61%), Gaps = 3/462 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLDG K+Q S +DGF HLQNE KE + EE D H YSSNDVD+LLN + +E L+
Sbjct: 57 QLDGLKLQRSYLDGFQSHLQNEVKERIIEEEADLHIYSSNDVDMLLNNSHADEAAFLETP 116
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
KQ + S+ L + P TPF R ++F Q
Sbjct: 117 GSKQEKTPGEPFNSELT--LTSDRPSSS---------RVAKTNGDRITPFATRVNKFTQQ 165
Query: 1846 FVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLS 1667
+VLN D S+ ++DE+++++ RCSL+V P G R+M +ED+F
Sbjct: 166 YVLNADNAASMPSTHEAETTDDEVIKRIQPSQRCSLQVQRSQPEPGCRFMYDRMEDRFNY 225
Query: 1666 LEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFS 1487
LE R++ AT +A+ C LA+ E + V ++ C+G+G+LN++S+LL+GS E S
Sbjct: 226 LEDRLRKSATLFSASGFCGEPADATLASEEKMFAVGMVTCDGEGRLNEKSILLQGSVEHS 285
Query: 1486 SGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLA 1307
G RVRLDL+ L S+F GQV+G+EGHN SGHC VAS++IDS P+SV +Q+ P A
Sbjct: 286 RGQRVRLDLKDLDHFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVSVDAQL-----PSA 340
Query: 1306 KRITIDPKSQ---INASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILI 1136
K+ +D + +A PR +S +IAAGP+TTTDNL F+PL+ELLSY+ +K +LI
Sbjct: 341 KKQAVDNGNHHQNSDAGTLPRA-LSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLI 399
Query: 1135 LMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDF 956
LMGPF+DS HP IK+GT+D+ F D+F ++ +++D+ +G RVIL+PS RDAHHDF
Sbjct: 400 LMGPFIDSDHPDIKKGTVDQTFHDIFHFEILRKIQDFTQYLGNTVRVILIPSVRDAHHDF 459
Query: 955 VFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
VFPQPAF+ + + ++ QI+C+ANP L N+I G CT+DI
Sbjct: 460 VFPQPAFDLNLPEDITHQISCLANPSLFSCNQIHFGCCTVDI 501
Score = 124 bits (310), Expect(2) = e-130
Identities = 70/137 (51%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = -1
Query: 827 LSSEEISRNSG-GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EEISR GK DR+ RLA HIL Q+S+YPLYP A+GVPLD + EAL+I APD
Sbjct: 505 LSGEEISRKPPVGKPGDRIGRLATHILKQQSYYPLYPPAAGVPLDFSLAKEALEISSAPD 564
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQN 471
+L+L SDLAPF KVL LGE + + + +NPGRLAKG GGTF E+ YN++
Sbjct: 565 VLLLTSDLAPFVKVLSLGEGSDV-QKQFICMNPGRLAKGIGGGTFVELY-------YNED 616
Query: 470 ENLTSLDEKTAVSIVRL 420
++T SI+R+
Sbjct: 617 ------TDRTKASIIRI 627
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 360 bits (924), Expect(2) = e-129
Identities = 194/454 (42%), Positives = 278/454 (61%), Gaps = 1/454 (0%)
Frame = -2
Query: 2188 VQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSN 2009
VQSS M FL LQNE++E + +EP HFYSS D+ ++LN E +N ++++ TP +
Sbjct: 57 VQSSHMGAFLQQLQNERREDIVKKEPGLHFYSS-DISMMLNDEYENTKEIILGTPTDK-- 113
Query: 2008 GFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNRD 1829
++ + + A KT G TPF R S+FVVQF LN +
Sbjct: 114 ---RKTSQSETIVSARKTNGS---------ISTSRKHLETITPFGQRKSKFVVQFTLNEN 161
Query: 1828 VL-DSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRI 1652
+S++ E E D+++++V I RCSL+++ P G R+M E+KF LE RI
Sbjct: 162 ANGESMKIENDEENLNDDIIKRVQPIKRCSLQIISSQPEPGCRFMYDRTENKFNFLESRI 221
Query: 1651 KNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFSSGHRV 1472
K+ TAL A+ +A+ S+ V +ICC +G+L ++ +LL+ S E S G RV
Sbjct: 222 KDHTTALVASGLHEEPTDPTVASQRSVFAVGMICCEEEGRLKEKPILLQSSVEHSGGQRV 281
Query: 1471 RLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITI 1292
RLDLQ L SVF GQV+GVEGHN SGHCL+AS+++D P+S S ++ P K+ +
Sbjct: 282 RLDLQNLDHFSVFPGQVVGVEGHNPSGHCLIASKIVDRIPLSASST---ENLPPTKKQAM 338
Query: 1291 DPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILMGPFVDS 1112
D Q ++ +S++IAAGPFTT DNL F+PL ELLSY+R+K ++IL+GPF+DS
Sbjct: 339 DQYLQSTSAVVAMPELSLIIAAGPFTTVDNLFFEPLAELLSYARRKQPQLIILLGPFIDS 398
Query: 1111 QHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVFPQPAFE 932
HP+IK+GT+D+ F ++F +++ RLRDY + MG ARVILVPS RDA HDFV+PQPAF+
Sbjct: 399 DHPEIKKGTVDRTFDEIFQDEILARLRDYVEYMGSAARVILVPSVRDASHDFVYPQPAFD 458
Query: 931 HHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
D + QI + NPG+ NE+ V CT+D+
Sbjct: 459 IQSPD-LEHQINSITNPGIFCANEVKVACCTVDV 491
Score = 132 bits (332), Expect(2) = e-129
Identities = 64/107 (59%), Positives = 79/107 (73%)
Frame = -1
Query: 827 LSSEEISRNSGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDI 648
LS+EEISRN G + R++ LA HILNQRSFYPLYP A GVP+D +PEAL + APDI
Sbjct: 495 LSAEEISRNPQGGSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTAPDI 554
Query: 647 LILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEI 507
LILPSDLA F +V+ LGE + E KC+ +NPGRL++G GG F E+
Sbjct: 555 LILPSDLAHFVRVISLGERSEGEEVKCICVNPGRLSRGEGGGFFMEL 601
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 370 bits (951), Expect(2) = e-129
Identities = 199/460 (43%), Positives = 290/460 (63%), Gaps = 1/460 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLD VQ+ +MDGFL HLQNEQKE + EEPD H YSS DVD++LN E ++ ++ + T
Sbjct: 53 QLDESTVQNGEMDGFLLHLQNEQKEAIIKEEPDLHIYSSKDVDMILNDEGEDLKEEVPGT 112
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
P +S + N+ F SI+ + G G TPF R+ +FVV+
Sbjct: 113 PTDESQ---KLNSEPFDSIIKSTGNGYSSGKRSKHV-----------TPFGRRTDKFVVK 158
Query: 1846 FVLNR-DVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFL 1670
F +N ++ + E ED+++++V +CS V G P G R+M IED+F
Sbjct: 159 FNINNLPDTENGDNEHVRENMEDDIIKRVQPRKKCSFVVHGSGPEPGCRFMYDRIEDRFN 218
Query: 1669 SLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEF 1490
+L+ RI+ A AL A+ +A+ ++ V +ICC+G+G+LN++SVLL+ S E
Sbjct: 219 ALDNRIRKHAAALVASGLYEEPTDPTVASQRNVFAVGMICCDGEGRLNEKSVLLQSSIEH 278
Query: 1489 SSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPL 1310
S G RV LDL L + S+F GQ++ +EGHN SGHCLVAS+++DS P+S D + P
Sbjct: 279 SGGQRVHLDLHNLSQFSIFPGQIVAIEGHNPSGHCLVASKLVDSIPLSAAP---DGNLPP 335
Query: 1309 AKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILM 1130
AK+ +D + + S + IS+LIA+GPFTT DNL F+PL ELL+Y+ +K +LIL+
Sbjct: 336 AKKQALDQEIESIGSSCTQ-EISVLIASGPFTTLDNLMFEPLTELLAYASRKLPQLLILL 394
Query: 1129 GPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVF 950
GPFVDS+HP+IK+GT+D F ++F +++ RL+DY + MG +A+V++VPSTRDA+HDFVF
Sbjct: 395 GPFVDSEHPEIKKGTVDGSFDEIFRQEILRRLQDYVEYMGSDAQVLIVPSTRDANHDFVF 454
Query: 949 PQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
PQPAF+ H + QI + NPG+ N++ VG CT+DI
Sbjct: 455 PQPAFDIHR-SNLQHQIRSLTNPGIFEANQVRVGCCTVDI 493
Score = 121 bits (304), Expect(2) = e-129
Identities = 66/109 (60%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Frame = -1
Query: 827 LSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
L SEE+SRN + G ++R+SRLA HIL+QRSFYPLYP A VPLD +PEAL I P
Sbjct: 497 LGSEEMSRNPTDGTPSNRMSRLANHILSQRSFYPLYPPAEDVPLDFSLAPEALHIPSVPH 556
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNE-NKCVSINPGRLAKGASGGTFAEI 507
ILI+PSD+ F KVL LG ++ E KCV INPGRLAKG GGTF E+
Sbjct: 557 ILIVPSDMKYFIKVLSLGGRIEGEEQTKCVCINPGRLAKGEGGGTFVEL 605
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum lycopersicum]
Length = 617
Score = 360 bits (924), Expect(2) = e-129
Identities = 193/454 (42%), Positives = 278/454 (61%), Gaps = 1/454 (0%)
Frame = -2
Query: 2188 VQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTPVKQSN 2009
VQSS M FL LQNE++E + +EP HFYSS D+ ++LN E +N +D++ TP +
Sbjct: 57 VQSSHMGAFLQQLQNERREDIVKKEPGLHFYSS-DISMMLNDEYENTKDIILGTPTDK-- 113
Query: 2008 GFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQFVLNRD 1829
++ + + A KT G TPF R ++FVVQF LN +
Sbjct: 114 ---RKTSQTETIVSARKTNGS---------ISTSRKHLETITPFGQRKNKFVVQFTLNEN 161
Query: 1828 VL-DSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLSLEKRI 1652
+S++ E E D+++++V I RCSL+++ P G R+M E+KF LE RI
Sbjct: 162 ANGESMKIENDEENPSDDIIKRVQPIKRCSLQIISSKPEPGCRFMYDRTENKFNFLESRI 221
Query: 1651 KNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFSSGHRV 1472
K+ TAL A+ +A+ S+ V +ICC +G+L ++ +LL+ S E+S G RV
Sbjct: 222 KDHTTALVASGLHEEPTDPTVASQRSVFAVGMICCEEEGRLKEKPILLQSSVEYSGGQRV 281
Query: 1471 RLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLAKRITI 1292
RLDLQ L SVF GQV+GVEGHN SGHCL+AS+++D P+S S ++ P K+ +
Sbjct: 282 RLDLQNLDHFSVFPGQVVGVEGHNPSGHCLIASKIVDHIPLSASST---ENLPPTKKQAM 338
Query: 1291 DPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILMGPFVDS 1112
D Q + +S++IAAGPFTT DNL F+PL ELLSY+R+K ++IL+GPF+DS
Sbjct: 339 DQYLQSANAVAAMPELSLIIAAGPFTTVDNLFFEPLAELLSYARRKQPQLIILLGPFIDS 398
Query: 1111 QHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVFPQPAFE 932
HP+IK+GT+D+ F ++F +++ RLRDY + MG ARV+LVPS RDA HDFV+PQPAF+
Sbjct: 399 DHPEIKKGTVDRTFDEIFQDEILARLRDYVEYMGSAARVVLVPSVRDASHDFVYPQPAFD 458
Query: 931 HHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
D + QI + NPG+ NE+ V CT+D+
Sbjct: 459 IQLPD-LEHQINSITNPGIFCANEVKVACCTVDV 491
Score = 130 bits (326), Expect(2) = e-129
Identities = 63/107 (58%), Positives = 78/107 (72%)
Frame = -1
Query: 827 LSSEEISRNSGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDI 648
LS+EEISRN G + R++ LA HILNQRSFYPLYP A GVP+D +PEAL + PDI
Sbjct: 495 LSAEEISRNPQGGSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTDPDI 554
Query: 647 LILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEI 507
LILPSDLA F +V+ LGE + E KC+ +NPGRL++G GG F E+
Sbjct: 555 LILPSDLAHFVRVVSLGERSEGEEVKCICVNPGRLSRGEGGGFFVEL 601
>gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 370 bits (950), Expect(2) = e-128
Identities = 196/459 (42%), Positives = 285/459 (62%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QL+G K++SS +DGFL HLQNE K+ + EE H YSSNDVD+LL+ + +EE L
Sbjct: 57 QLNGLKLESSYLDGFLSHLQNEVKDRIIKEETSLHIYSSNDVDMLLSSTHTDEEGFLDTP 116
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
KQ + S+ + ++ TPF R ++F Q
Sbjct: 117 STKQEKPNGESCNSELTPLTTDRPSSS----------RLAKTNGDRITPFSQRVNKFTQQ 166
Query: 1846 FVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLS 1667
+VLN D + S+ + +EDE++R+V RC+L+V P G R+M IED+F
Sbjct: 167 YVLNSDNVASVPSKDEIESTEDEVIRRVQPSKRCTLQVQHSQPEPGCRFMYDRIEDRFNY 226
Query: 1666 LEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFS 1487
LE RI+ + +A+ C LA+ ES+ V ++ C+G+G LN++S+LL+GS E S
Sbjct: 227 LEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGEGHLNEKSILLQGSVEHS 286
Query: 1486 SGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLA 1307
G RVRLDL+ + + S+F GQV+G++GHN SGHC V S++ DS P V +Q+ P A
Sbjct: 287 RGQRVRLDLKDVDRFSLFPGQVVGIQGHNPSGHCFVVSKLNDSIPNFVDAQL-----PRA 341
Query: 1306 KRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILMG 1127
K+ +D + ++ R +S +IAAGP+TT+DNL F+PL+EL+SY+ +K +LILMG
Sbjct: 342 KKQAVDSEGNQSSDVVSRV-LSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMG 400
Query: 1126 PFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVFP 947
PF+DS HP+IK+G +D+ FQD+FL ++ +L+D+ +G N RVIL+PS RDAHHDFVFP
Sbjct: 401 PFIDSDHPEIKKGAVDQSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFP 460
Query: 946 QPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
QPAF+ + + ++ QITC+ANP L NEI G CT+DI
Sbjct: 461 QPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDI 499
Score = 119 bits (298), Expect(2) = e-128
Identities = 66/137 (48%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
Frame = -1
Query: 827 LSSEEISRNSGG-KTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EEISR G K DR+ R+ HIL Q+S+YPLYP +GVPLD + AL+I APD
Sbjct: 503 LSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPD 562
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQN 471
+L+LPSDLAPF KVL L E + + +NPGRLAKG GGTF E+ +YN++
Sbjct: 563 VLLLPSDLAPFVKVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NYNED 614
Query: 470 ENLTSLDEKTAVSIVRL 420
+KT+ S++R+
Sbjct: 615 ------TDKTSASLIRI 625
>gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 370 bits (949), Expect(2) = e-128
Identities = 196/459 (42%), Positives = 284/459 (61%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QL+G K++SS +DGFL HLQNE K+ + EE H YSSNDVD+LL+ + +EE L
Sbjct: 57 QLNGLKLESSYLDGFLSHLQNEVKDRIIKEETSLHIYSSNDVDMLLSSTHTDEEGFLDTP 116
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
KQ + S+ + ++ TPF R ++F Q
Sbjct: 117 STKQEKPNGESCNSELTPLTTDRPSSS----------RLAKTNGDRITPFSQRVNKFTQQ 166
Query: 1846 FVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLS 1667
+VLN D + S+ + +EDE++R+V RC+L+V P G R+M IED+F
Sbjct: 167 YVLNSDNVASVPSKDEIESTEDEVIRRVQPSKRCTLQVQRSQPEPGCRFMYDRIEDRFNY 226
Query: 1666 LEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFS 1487
LE RI+ + +A+ C LA+ ES+ V ++ C+G+G LN++S+LL+GS E S
Sbjct: 227 LEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGEGHLNEKSILLQGSVEHS 286
Query: 1486 SGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLA 1307
G VRLDL+ + + S+F GQV+G++GHN SGHC V S++ DS P V +Q+ P A
Sbjct: 287 RGQHVRLDLKDVDRFSLFPGQVVGIQGHNPSGHCFVVSKLNDSIPNFVDAQL-----PRA 341
Query: 1306 KRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILMG 1127
K+ +D + ++ R +S +IAAGP+TT+DNL F+PL+EL+SY+ +K +LILMG
Sbjct: 342 KKQAVDSEGNQSSDVVSRV-LSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMG 400
Query: 1126 PFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVFP 947
PF+DS HP+IK+G +DK FQD+FL ++ +L+D+ +G N RVIL+PS RDAHHDFVFP
Sbjct: 401 PFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFP 460
Query: 946 QPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
QPAF+ + + ++ QITC+ANP L NEI G CT+DI
Sbjct: 461 QPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDI 499
Score = 119 bits (298), Expect(2) = e-128
Identities = 66/137 (48%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
Frame = -1
Query: 827 LSSEEISRNSGG-KTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EEISR G K DR+ R+ HIL Q+S+YPLYP +GVPLD + AL+I APD
Sbjct: 503 LSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPD 562
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQN 471
+L+LPSDLAPF KVL L E + + +NPGRLAKG GGTF E+ +YN++
Sbjct: 563 VLLLPSDLAPFVKVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NYNED 614
Query: 470 ENLTSLDEKTAVSIVRL 420
+KT+ S++R+
Sbjct: 615 ------TDKTSASLIRI 625
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 352 bits (904), Expect(2) = e-128
Identities = 206/468 (44%), Positives = 293/468 (62%), Gaps = 10/468 (2%)
Frame = -2
Query: 2203 LDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDN-EEDVLQHT 2027
LDG V+ Q+DGFL HLQNEQKE + EPD H YSS DVD++LN EN++ ED+L
Sbjct: 53 LDGSVVELEQLDGFLQHLQNEQKETVIKGEPDLHVYSSKDVDVILNDENEDLNEDIL--- 109
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
K NG SQ + L + TP ++G TPF R+ +FVV+
Sbjct: 110 --KTPNGKSQSLHKERLDL----TPYTNEG------LFSSGKPSKHETPFGQRTEKFVVR 157
Query: 1846 FVLNR--DVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGF------RYMNA 1691
F +N D++ +++ + E ED +++KV + CSL V G +GF R+M
Sbjct: 158 FNINNMPDMVTAVKVDNSE-NDEDTIIKKVRPLQGCSLTVHG----SGFGLEPNCRFMYD 212
Query: 1690 SIEDKFLSLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVL 1511
ED+F +L+ RI A ALAA+ +A+ +SI V +I C+G+G LND+S+L
Sbjct: 213 KDEDRFNALDNRIMRHAKALAASGLYEEAVDPTVASQKSIFAVGMIYCDGEGHLNDKSIL 272
Query: 1510 LEGSAEFSSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQM 1331
L+ S S G RVRL+LQ L + S+F GQV+G+EGHN SGHCL+AS+++DS+P+S
Sbjct: 273 LQSSIAHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATI-- 330
Query: 1330 DDQHAPLAKRITIDPKSQ-INASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKK 1154
D P AK+I ++ Q IN S TP +SM+IA+GP+TTTDNL F+PL ELL+Y+++K
Sbjct: 331 -DPILPPAKKIALNHDIQPINQSSTP-SELSMIIASGPYTTTDNLLFEPLTELLAYAKRK 388
Query: 1153 NFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTR 974
+LIL+GPFVDS+H IK GT++ F+++F +V R++DY + MGP+ARV+L+PSTR
Sbjct: 389 VPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFKFEVLRRVQDYAEHMGPDARVLLMPSTR 448
Query: 973 DAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
DA+HDF FPQPAF+ + QI+ NP +L N+ + CT+DI
Sbjct: 449 DANHDFAFPQPAFD--IPSDLKLQISSPPNPCILEANQAKIACCTMDI 494
Score = 136 bits (343), Expect(2) = e-128
Identities = 73/112 (65%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
Frame = -1
Query: 836 RHFLSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILV 660
RH LS EE+SRN + G TNDRLS LA+HIL QRSFYPLYP A GVPLD +P+ALDI V
Sbjct: 496 RH-LSGEELSRNLTKGGTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPQALDISV 554
Query: 659 APDILILPSDLAPFAKVLQLGEDLKTNEN-KCVSINPGRLAKGASGGTFAEI 507
PDILILPSD+ F KV+ LGE E +CV +NPGRLAKG GGTF E+
Sbjct: 555 IPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGRLAKGEGGGTFVEL 606
>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
Length = 621
Score = 351 bits (900), Expect(2) = e-127
Identities = 197/468 (42%), Positives = 288/468 (61%), Gaps = 9/468 (1%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLD V+ ++MDGF HLQNEQ E + +EPD + YS DVD++L+ E+++ ++V+ T
Sbjct: 52 QLDESVVKDAEMDGFSGHLQNEQVEAVVKKEPDLYMYSFKDVDMILDAEDEDTKEVILRT 111
Query: 2026 PVKQSNGF-------SQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNR 1868
P +S +Q+ S+ S + +TP + TPF R
Sbjct: 112 PTDKSEKLHSDLYDSAQKTNSNIYS--SRRTPKQ-------------------VTPFGTR 150
Query: 1867 SSRFVVQFVL-NRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNA 1691
S++FVV+F + N +++ ED +++++ RCSL V P G R+M
Sbjct: 151 SNKFVVKFNIDNLPTSETVNGMHDHENLEDAVIKRIQPQKRCSLVVHSSGPEPGCRFMYD 210
Query: 1690 SIEDKFLSLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVL 1511
IED F +LE RI+ A AL A+ ++A+ SI V +I C+ +G LND+S+L
Sbjct: 211 RIEDGFNALENRIRKHAAALVASGLYQEPMDPSVASQRSIFAVGMIFCDDEGHLNDKSIL 270
Query: 1510 LEGSAEFSSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQM 1331
L+ S E S G RVRL+L KL S+F GQV+G+EGHN SGHCL+AS ++DS P+++ +
Sbjct: 271 LQSSVEHSGGQRVRLELNKLSHFSIFPGQVVGIEGHNPSGHCLIASEIVDSVPLTIAA-- 328
Query: 1330 DDQHAPLAKRITIDPKSQI-NASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKK 1154
D + P AKR ++ + Q N S TP IS++IAAGPFTTTDNL F+PL+ELL+Y+ +K
Sbjct: 329 -DTNLPPAKRQALNEEIQATNLSSTPT-EISLIIAAGPFTTTDNLLFEPLKELLTYATRK 386
Query: 1153 NFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTR 974
+LIL+GPF+DS+HPQIK+GT D F ++F +V ++DY + MG +ARVIL+PS R
Sbjct: 387 CPQLLILLGPFIDSEHPQIKKGTFDLSFDEIFRSEVLRMVQDYVEYMGSDARVILIPSIR 446
Query: 973 DAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
DA+HDFVFPQP F+ + QIT + NPG+ +E+ +G CT+DI
Sbjct: 447 DANHDFVFPQPPFDLDLHN--LNQITSLTNPGIFEADEVKIGCCTVDI 492
Score = 133 bits (334), Expect(2) = e-127
Identities = 73/120 (60%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
Frame = -1
Query: 827 LSSEEISRNS-GGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EEISR+S G +DRLSRLA+HIL+QRSFYPLYP A GVPLD +PEAL I PD
Sbjct: 496 LSGEEISRHSMDGTPSDRLSRLASHILSQRSFYPLYPPAEGVPLDSSLAPEALHIPSVPD 555
Query: 650 ILILPSDLAPFAKVLQLG--EDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYN 477
+LILPSD+ F KVL LG + K KC+ INPGRLAKGA GGTF E+ Q N
Sbjct: 556 LLILPSDIKYFVKVLSLGGTSEGKEQTKKCICINPGRLAKGAGGGTFVELKYQGSPDKMN 615
>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
B family protein [Populus trichocarpa]
Length = 618
Score = 352 bits (903), Expect(2) = e-125
Identities = 192/459 (41%), Positives = 284/459 (61%), Gaps = 1/459 (0%)
Frame = -2
Query: 2203 LDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHTP 2024
LD V++++MDGFL HLQNEQKE + EEP+ + YSS DVD++LN + EED+ + P
Sbjct: 53 LDESTVRNAEMDGFLLHLQNEQKEAVVKEEPNLYIYSSKDVDMILNYD---EEDLKEEVP 109
Query: 2023 VKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQF 1844
++ + N+ F S + G G TPF R+ +FVV+F
Sbjct: 110 GTPTDKSLKLNSEPFNSPPKSYGNGYSSGKPSKLV-----------TPFGRRTDKFVVKF 158
Query: 1843 VLNR-DVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKFLS 1667
+N V+++ + E EDE++++ RCSL V P G R+M IED+F +
Sbjct: 159 NINSLPVVENNDGEHDHGNLEDEIIKRAQPCKRCSLMVHRLGPEPGCRFMYDKIEDRFNA 218
Query: 1666 LEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAEFS 1487
LE RI+ A AL A+ +A+ +I V +ICC+G+G+LN++S++L+ S E S
Sbjct: 219 LENRIRKHAIALFASGLYEEPMDPTVASQRNIFAVGMICCDGEGRLNEKSIMLQSSVEHS 278
Query: 1486 SGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAPLA 1307
G VRL+L L + S+F GQ++G+EG N SGHCL+AS+++DS P+S ++ QH
Sbjct: 279 GGRNVRLELHNLSQFSIFPGQIVGIEGQNPSGHCLIASKLVDSVPLSATVAVN-QHP--T 335
Query: 1306 KRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILILMG 1127
K+ +D + S + IS LIA+GPFTTTDNL F+PL ELL+Y+ +K +L+LMG
Sbjct: 336 KKQALDLVVESTDSSYVQKEISALIASGPFTTTDNLFFEPLTELLAYAGRKLPQLLVLMG 395
Query: 1126 PFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFVFP 947
PF+DS+HP++K+G +D+ F ++F +++ RL+D+ + G N RVILVPS RDA HDFVFP
Sbjct: 396 PFIDSEHPEVKKGAVDRSFDELFCQEILRRLQDHVEYAGSNVRVILVPSIRDAQHDFVFP 455
Query: 946 QPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
QPAF+ H + QIT + NPG+ N++ VG CT+DI
Sbjct: 456 QPAFDIH-LPNLEHQITGLTNPGIFEANQVKVGCCTVDI 493
Score = 127 bits (320), Expect(2) = e-125
Identities = 69/118 (58%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
Frame = -1
Query: 827 LSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
+S EE+SRN + G +DR+SRLA HI++QRSFYPLYP A VPLD +PEAL I PD
Sbjct: 497 ISGEEMSRNPTDGTPSDRMSRLANHIISQRSFYPLYPPAEDVPLDFSLAPEALHINSIPD 556
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYN 477
ILILPSD+ F KVL LGE + KC+ INPGRLAKG GGTFAE+ Q N
Sbjct: 557 ILILPSDMKYFMKVLTLGEG--EEQRKCICINPGRLAKGEGGGTFAELNYQGSPDKMN 612
>gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]
Length = 670
Score = 370 bits (949), Expect(2) = e-124
Identities = 199/461 (43%), Positives = 297/461 (64%), Gaps = 2/461 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QL+G VQ+++MDGFL HLQ+EQKE + EEP H YSS DVD++LN E+ +E++ + T
Sbjct: 52 QLNGSTVQNAEMDGFLLHLQDEQKEAIIKEEPGLHIYSSKDVDMILNDEDGDEKEEVPGT 111
Query: 2026 PVKQS-NGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVV 1850
P + S + +S+Q S +T GK TPF R+ +FVV
Sbjct: 112 PTRNSQDSYSEQFDS------TPQTNGK---------IFSSGKPSKLITPFGQRTQKFVV 156
Query: 1849 QFVLNR-DVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDKF 1673
+F +N +++ E E +ED+++RK+ RCSL V G P TG R+M IED+F
Sbjct: 157 KFSINSMPNMENGETELDPENNEDDVIRKIQPGRRCSLIVHGSKPGTGCRFMYDRIEDRF 216
Query: 1672 LSLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSAE 1493
+LE RI+ +A A +++ +++ +SI V +ICC+G+G LN++S LL+ S E
Sbjct: 217 NALESRIRKYAVAFTSSKLYEEPVDPTVSSQKSIFTVGMICCDGEGHLNEKSTLLQSSVE 276
Query: 1492 FSSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHAP 1313
S G RVRL+LQ L + S+F GQV+G+EGHN SGHCL+AS+ +DS P+ S M D
Sbjct: 277 HSGGQRVRLELQNLNQFSIFPGQVVGIEGHNPSGHCLIASKFVDSIPL---SDMADVDLH 333
Query: 1312 LAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILIL 1133
K+ ++ + Q N + +S++IA+GPFTTTDNL+F+PL ELL+Y+ +K +LIL
Sbjct: 334 PTKKQALEKEIQSNGLSGLQAELSVIIASGPFTTTDNLSFEPLVELLAYANRKLPQLLIL 393
Query: 1132 MGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDFV 953
+GPFVDS+HP+I++G+ ++ F ++F ++ RL+DY + MG +ARVILVPS RDA+HDFV
Sbjct: 394 LGPFVDSEHPEIEKGSTNRSFDEIFHFEILKRLQDYAEYMGSHARVILVPSIRDANHDFV 453
Query: 952 FPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
FPQPAF+ D + QIT + NPG+L N++ + C++D+
Sbjct: 454 FPQPAFDIQPPD-LKHQITSITNPGILEANQVKIACCSVDV 493
Score = 106 bits (265), Expect(2) = e-124
Identities = 60/110 (54%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Frame = -1
Query: 827 LSSEEISRN-SGGKTNDRLSRLAAHILNQRS-------FYPLYPAASGVPLDLCASPEAL 672
LS EEISRN GG +DR+ RL HIL QR FYPLYP A GVP D +PEAL
Sbjct: 497 LSGEEISRNPKGGAPSDRMGRLVNHILGQRRHAITLHLFYPLYPPAEGVPFDSSLAPEAL 556
Query: 671 DILVAPDILILPSDLAPFAKVLQLGEDLKTNEN-KCVSINPGRLAKGASG 525
+I + PDILI+PSD+ F KVL LG + E KC+ +NPGRL+KG G
Sbjct: 557 EISMIPDILIVPSDMKYFVKVLPLGGRGEGEEQMKCICVNPGRLSKGEGG 606
>ref|XP_001772028.1| predicted protein [Physcomitrella patens] gi|162676629|gb|EDQ63109.1|
predicted protein [Physcomitrella patens]
Length = 635
Score = 339 bits (869), Expect(2) = e-124
Identities = 183/471 (38%), Positives = 275/471 (58%), Gaps = 12/471 (2%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLL--------NPENDN 2051
QLDG +V + +D F L+ ++ E + + H+Y+ +DVD+ + P + +
Sbjct: 53 QLDGVQVLKANLDSFKQFLERDKIESFRKRQTGLHYYTRDDVDMYVLRIPSCNERPTSGS 112
Query: 2050 EEDVLQHTP---VKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTP 1880
D ++ TP ++ GFS +D TP
Sbjct: 113 YVDPMELTPPPFASKNRGFSLHTPADV-------------------------SLKPSDTP 147
Query: 1879 FLNRSSRFVVQFVLNRDVLDSIEKERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRY 1700
F R +F VQ N + +E +D++L+++ + RC ++V+ P G RY
Sbjct: 148 FQRRVKKFNVQSTFNDHLSFEASEEAVSNSGDDDILKRLKPVRRCEVDVVRTGPEPGIRY 207
Query: 1699 MNASIEDKFLSLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQ 1520
M E++F ++++RI+NFA L + HVA+++ E ++VV ICC+ +G LND
Sbjct: 208 MFDQTENRFGAVDRRIQNFAKVLEERLQRKMNDHVAVSSQEKVMVVGRICCDAEGHLNDN 267
Query: 1519 SVLLEGSAEFSSGHRVRLDLQKLLK*SVFLGQVI-GVEGHNLSGHCLVASRVIDSYPISV 1343
S+LLEGS E S+G RVRLDL+ + + S F GQV+ GVEG N SG CL+A+R+ DS P+S
Sbjct: 268 SILLEGSVEHSNGQRVRLDLRNIPRFSFFPGQVVLGVEGQNPSGFCLMATRIFDSIPVSS 327
Query: 1342 PSQMDDQHAPLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYS 1163
S D+ P KR T S+ + PR ++ AAGPFTT DNLA++PL EL +Y+
Sbjct: 328 SSLKSDE--PPTKRRT---SSRDPSDSEPRQYTRIVAAAGPFTTNDNLAYEPLVELFAYA 382
Query: 1162 RKKNFNILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVP 983
+K N+LILMGPFVDS+HPQIK+GT+ KLF +F E++ +R+ DYC++MG R++LVP
Sbjct: 383 KKVRPNLLILMGPFVDSEHPQIKQGTVGKLFSHIFQEEIRMRVEDYCEEMGDGCRIVLVP 442
Query: 982 STRDAHHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
S RDAHHD +FPQP F+ F+ + QIT ++NPG+L+++E+ VG CT DI
Sbjct: 443 SHRDAHHDLIFPQPPFDADEFEDPNHQITLLSNPGVLKVDEVTVGFCTTDI 493
Score = 134 bits (338), Expect(2) = e-124
Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 7/146 (4%)
Frame = -1
Query: 836 RHFLSSEEISRNSGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVA 657
RH LSSEE+SR G ++DR++RLA+H+L+QRSFYPL+P VPLDL +PE+LD+ +
Sbjct: 495 RH-LSSEEVSRVPQGASSDRMTRLASHLLSQRSFYPLFPPPQSVPLDLSVAPESLDLSSS 553
Query: 656 PDILILPSDLAPFAKVLQLGEDLKTNEN-------KCVSINPGRLAKGASGGTFAEILIQ 498
PDIL+L S+LAPF KVL L D++ EN KC+ INPG A+G SGGTF EI +
Sbjct: 554 PDILLLSSNLAPFVKVLSLPADIQRQENREKVEKVKCICINPGYAARGMSGGTFTEIHL- 612
Query: 497 EREQSYNQNENLTSLDEKTAVSIVRL 420
S + N L L ++ V IVR+
Sbjct: 613 ---SSGDSNTELEPLHKRAQVKIVRV 635
>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
Length = 620
Score = 350 bits (898), Expect(2) = e-123
Identities = 196/462 (42%), Positives = 280/462 (60%), Gaps = 3/462 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLD V+ +MDGF+ HLQNEQKE + EEP H YSS DVD++LN E++N + + T
Sbjct: 52 QLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNEDENIAEDILGT 111
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
P +S S + + + K +TPF R+ + VV+
Sbjct: 112 PTDNLKLYSDALDSTYKANANGYSSDKPS---------------KLATPFGRRTEKLVVK 156
Query: 1846 FVLNRDVLDSIEK---ERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDK 1676
F +N L + E E + +ED+++++V + +CSL V G P G R+M ED+
Sbjct: 157 FNINN--LPNTENGCIEHDDENTEDDIIKRVKTGEKCSLMVHGSGPEPGCRFMYDRTEDR 214
Query: 1675 FLSLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSA 1496
F +LE RI+ A AL ++ +A+ ++ V +ICC+G G LND+SVLL+ S
Sbjct: 215 FNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSV 274
Query: 1495 EFSSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHA 1316
E S G RVRLDL KL + S+F GQV+G+EG N SGHCL+AS+++D P+ V + +D H
Sbjct: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVD-VHP 333
Query: 1315 PLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILI 1136
+ + + + S + S+ ISM+IAAGPFTTTDNL F+PL+EL+SY+++K +LI
Sbjct: 334 SMKQALDQEIHSTVVISRPEE--ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLI 391
Query: 1135 LMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDF 956
L+GPFVDS+HPQIK+GT D F ++F ++ RL+DY + MG R ILVPS RDA+HDF
Sbjct: 392 LLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDF 451
Query: 955 VFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
V PQP F+ D + QIT + NPG N+I VG CT+D+
Sbjct: 452 VLPQPPFDIQPPD-IIHQITSLTNPGTFEANQIKVGCCTVDV 492
Score = 122 bits (306), Expect(2) = e-123
Identities = 66/109 (60%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Frame = -1
Query: 827 LSSEEISRNS-GGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EE+SR S G +NDR+ RLA HI NQRSFYPLYP A G+PLD + EAL I PD
Sbjct: 496 LSGEEMSRCSKDGTSNDRMGRLANHIPNQRSFYPLYPPAEGIPLDFSLAQEALTISTIPD 555
Query: 650 ILILPSDLAPFAKVLQL-GEDLKTNENKCVSINPGRLAKGASGGTFAEI 507
I+ILPSD+ F KVL L G + + KCV +NPGRLAKG GTFAEI
Sbjct: 556 IIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 604
>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
gi|557540306|gb|ESR51350.1| hypothetical protein
CICLE_v10030973mg [Citrus clementina]
Length = 620
Score = 350 bits (898), Expect(2) = e-123
Identities = 196/462 (42%), Positives = 280/462 (60%), Gaps = 3/462 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDNEEDVLQHT 2027
QLD V+ +MDGF+ HLQNEQKE + EEP H YSS DVD++LN E++N + + T
Sbjct: 52 QLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNEDENIAEDILGT 111
Query: 2026 PVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVVQ 1847
P +S S + + + K +TPF R+ + VV+
Sbjct: 112 PTDNLKLYSDALDSTYKANANGYSSDKPS---------------KLATPFGRRTEKLVVK 156
Query: 1846 FVLNRDVLDSIEK---ERGEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDK 1676
F +N L + E E + +ED+++++V + +CSL V G P G R+M ED+
Sbjct: 157 FNINN--LPNTENGCIEHDDENTEDDIIKRVKTGKKCSLMVHGSGPEPGCRFMYDRTEDR 214
Query: 1675 FLSLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSA 1496
F +LE RI+ A AL ++ +A+ ++ V +ICC+G G LND+SVLL+ S
Sbjct: 215 FNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSV 274
Query: 1495 EFSSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHA 1316
E S G RVRLDL KL + S+F GQV+G+EG N SGHCL+AS+++D P+ V + +D H
Sbjct: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVD-VHP 333
Query: 1315 PLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILI 1136
+ + + + S + S+ ISM+IAAGPFTTTDNL F+PL+EL+SY+++K +LI
Sbjct: 334 SMKQALDQEIHSTVVISRPEE--ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLI 391
Query: 1135 LMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDF 956
L+GPFVDS+HPQIK+GT D F ++F ++ RL+DY + MG R ILVPS RDA+HDF
Sbjct: 392 LLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDF 451
Query: 955 VFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
V PQP F+ D + QIT + NPG N+I VG CT+D+
Sbjct: 452 VLPQPPFDIQPPD-IIHQITSLTNPGTFEANQIKVGCCTVDV 492
Score = 122 bits (306), Expect(2) = e-123
Identities = 67/109 (61%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Frame = -1
Query: 827 LSSEEISRNS-GGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EE+SR S G +NDR+ RLA HI NQRSFYPLYP A G+PLD + EAL I PD
Sbjct: 496 LSGEEMSRCSKDGTSNDRMGRLANHIPNQRSFYPLYPPAEGIPLDFSLAQEALTISTIPD 555
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENK-CVSINPGRLAKGASGGTFAEI 507
I+ILPSD+ F KVL LG + E K CV +NPGRLAKG GTFAEI
Sbjct: 556 IIILPSDMKYFIKVLSLGGRNEGEEQKRCVCVNPGRLAKGEGSGTFAEI 604
>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
Length = 612
Score = 343 bits (880), Expect(2) = e-123
Identities = 188/462 (40%), Positives = 289/462 (62%), Gaps = 3/462 (0%)
Frame = -2
Query: 2206 QLDGCKVQSSQMDGFLHHLQNEQKEVLKNEEPDFHFYSSNDVDLLLNPENDN-EEDVLQH 2030
Q++G V+ ++MDGFL +LQ++QK + +E D H YSS DVD++LN E+++ EDVL
Sbjct: 52 QINGTVVEDAEMDGFLGYLQSQQKVAIDEKELDLHIYSSRDVDMILNDEDEDIREDVLGT 111
Query: 2029 TPVKQSNGFSQQNASDFLSILANKTPGKDDGHXXXXXXXXXXXXXXXSTPFLNRSSRFVV 1850
P +S + + + N + GK +TPF R+ + VV
Sbjct: 112 PPPFKSQNHYSEPSDSTPQTIGNISSGKPS---------------KLATPFGRRTDKLVV 156
Query: 1849 QFVLN-RDVLDSIEKER-GEAGSEDELLRKVPSINRCSLEVLGKPPPTGFRYMNASIEDK 1676
+F +N + ++ EKE E +D+++RKV RCSL V G P G R+M IED+
Sbjct: 157 KFSINNKPNTENREKEDDNENHEDDDVIRKVKPGKRCSLIVHGSGPEIGCRFMYDRIEDR 216
Query: 1675 FLSLEKRIKNFATALAANESCSVTHHVALAT*ESILVVSLICCNGKGQLNDQSVLLEGSA 1496
F +LE RI +ATAL ++ +++ + I V +I C+G+G LN++S LL+ SA
Sbjct: 217 FNALENRISKYATALVSSGQYEEPLDPTVSSQKIIFTVGMIYCDGEGHLNEKSTLLQSSA 276
Query: 1495 EFSSGHRVRLDLQKLLK*SVFLGQVIGVEGHNLSGHCLVASRVIDSYPISVPSQMDDQHA 1316
E S G RVR++LQ L + S+F GQ++G+EG N SGHC +AS+++DS P+ + DD +
Sbjct: 277 EHSGGQRVRIELQNLSQFSIFPGQLVGIEGINPSGHCFIASKLVDSIPLPIA---DDANL 333
Query: 1315 PLAKRITIDPKSQINASKTPRGNISMLIAAGPFTTTDNLAFQPLEELLSYSRKKNFNILI 1136
P AK+ +D + + ++IA+GPFTTTDNL F+PL ELL+Y+ K +LI
Sbjct: 334 PPAKKQALDQEIFFLTRE-------IIIASGPFTTTDNLLFEPLRELLAYASKTLPQLLI 386
Query: 1135 LMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCIRLRDYCDDMGPNARVILVPSTRDAHHDF 956
L+GPF+DS+HP+IK+GT+D+ F ++F ++ RL+D+ + MG +AR++LVPS RDA+HDF
Sbjct: 387 LLGPFIDSEHPEIKKGTVDRSFDEIFRSEILRRLQDHVEYMGSHARIVLVPSIRDANHDF 446
Query: 955 VFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDI 830
VFPQPAF+ H + + QIT + NPG+ N++ +G C++DI
Sbjct: 447 VFPQPAFDIHPAN-LRHQITSLTNPGIFEGNQVKIGCCSVDI 487
Score = 129 bits (324), Expect(2) = e-123
Identities = 66/108 (61%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Frame = -1
Query: 827 LSSEEISRN-SGGKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPD 651
LS EEISRN GK +DR+SRLA HI++QRSFYPLYP A G+PLD +PEAL+I + PD
Sbjct: 491 LSGEEISRNPKDGKLSDRMSRLANHIISQRSFYPLYPPAEGIPLDFSLAPEALNISLIPD 550
Query: 650 ILILPSDLAPFAKVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEI 507
ILILPSD+ F KV GE+ + KC+ +NPGRLAKG GGTF E+
Sbjct: 551 ILILPSDMKHFVKVKWSGEE--KEQVKCICVNPGRLAKGEGGGTFVEL 596