BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00013628
         (1329 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome gi|1237084|emb|C...   293   1e-76
gb|ACN40636.1| unknown [Picea sitchensis]                             291   3e-76
ref|XP_001773550.1| phytochrome 4 [Physcomitrella patens] gi|139...   267   8e-69
gb|AAM94952.1| phytochrome [Physcomitrella patens]                    265   3e-68
gb|ABW91071.1| phytochrome-4 [Ceratodon purpureus]                    264   6e-68
dbj|BAB39687.1| phytochrome [Marchantia paleacea subsp. diptera]      262   2e-67
ref|XP_002991119.1| hypothetical protein SELMODRAFT_161430 [Sela...   258   4e-66
ref|XP_002991641.1| hypothetical protein SELMODRAFT_161807 [Sela...   258   4e-66
ref|XP_001754366.1| phytochrome 5c [Physcomitrella patens] gi|16...   257   7e-66
ref|XP_001761145.1| phytochrome 5a [Physcomitrella patens] gi|16...   257   7e-66
gb|AAM94954.1| phytochrome [Physcomitrella patens]                    256   2e-65
ref|XP_001782339.1| phytochrome 2 [Physcomitrella patens] gi|139...   255   3e-65
ref|XP_001767224.1| phytochrome 5b3 [Physcomitrella patens] gi|1...   254   4e-65
sp|Q01549.1|PHY1_SELMA RecName: Full=Phytochrome 1 gi|22603|emb|...   254   7e-65
prf||1709211A phytochrome                                             254   7e-65
sp|Q39557.1|PHY2_CERPU RecName: Full=Phytochrome 2 gi|1314837|gb...   251   5e-64
gb|AAB19058.1| phytochrome photoreceptor [Ceratodon purpureus]        250   8e-64
ref|XP_001778155.1| phytochrome 1 [Physcomitrella patens] gi|139...   248   4e-63
gb|AAM94953.1| phytochrome [Physcomitrella patens]                    248   4e-63
sp|P36505.1|PHY1_PHYPA RecName: Full=Phytochrome 1 gi|402606|emb...   246   2e-62

>sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome gi|1237084|emb|CAA65510.1| phytochrome
            [Pinus sylvestris]
          Length = 1131

 Score =  293 bits (750), Expect = 1e-76
 Identities = 142/209 (67%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            EE+DL++DQKQ +ETS  CERQMQKVMDDMDLES+EDGYMELDT +F LG +IDAVVSQG
Sbjct: 923  EETDLSDDQKQFVETSAVCERQMQKVMDDMDLESLEDGYMELDTAEFILGTVIDAVVSQG 982

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI LREK +QLIR+IP +VKT+ ++GD+ ++QQILADFLLN +RFTP P+GWVAIKV P 
Sbjct: 983  MIVLREKGLQLIREIPGEVKTMRLYGDEVKIQQILADFLLNVLRFTPSPEGWVAIKVFPT 1042

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
            +KQLGGGLH VHLE RITHPG GLPAEL+QDLFD ++ A QEGVG          MNG+V
Sbjct: 1043 LKQLGGGLHVVHLEFRITHPGLGLPAELVQDLFDRSQWATQEGVGLSMCRKLLKLMNGDV 1102

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            +YI+E   CYFLVN+  P+AQRED  S +
Sbjct: 1103 RYIRESGICYFLVNVEFPMAQREDAASIK 1131


>gb|ACN40636.1| unknown [Picea sitchensis]
          Length = 1132

 Score =  291 bits (746), Expect = 3e-76
 Identities = 143/209 (68%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            EE+DL++DQKQ +ETS  CERQMQKV+DDMDL+S+EDGYMELDT +F LG +IDAVVSQG
Sbjct: 924  EETDLSDDQKQFVETSAVCERQMQKVIDDMDLDSLEDGYMELDTAEFILGTVIDAVVSQG 983

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI LREK +QLIR+IP +VKT+ ++GDQ RLQQILADFLLNA+RFTP P+GWVAIKVLP 
Sbjct: 984  MIILREKGLQLIREIPGEVKTMHLYGDQVRLQQILADFLLNALRFTPSPEGWVAIKVLPT 1043

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
            +KQL G LH V LE RITHPG GLPAEL+QDLFD ++   QEGVG          MNG+V
Sbjct: 1044 LKQLSGALHVVLLEFRITHPGPGLPAELVQDLFDRSRWTTQEGVGLSMCRKLLKLMNGDV 1103

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            QY++E  +CYFLVN+ LPLAQRED  S +
Sbjct: 1104 QYVRESGKCYFLVNVELPLAQREDASSMK 1132


>ref|XP_001773550.1| phytochrome 4 [Physcomitrella patens] gi|139001628|dbj|BAF51710.1|
            phytochrome4 [Physcomitrella patens]
            gi|162675089|gb|EDQ61588.1| phytochrome 4 [Physcomitrella
            patens]
          Length = 1126

 Score =  267 bits (682), Expect = 8e-69
 Identities = 126/209 (60%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL+EDQ+Q +ETS  CERQ++KV+DDMDLESIEDGY+ELDT +F +G ++DAVVSQG
Sbjct: 918  EDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDGYLELDTNEFVMGTVMDAVVSQG 977

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI  REK +QLIR+ P ++K +C+FGDQ RLQQ+LADFLLNA+RFTP  +GWV IKV+P 
Sbjct: 978  MITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLLNAVRFTPSSEGWVGIKVVPT 1037

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGGG+H +HLE R+TH G GLP EL+ ++FD  +   QEG+G          MNG V
Sbjct: 1038 KKRLGGGIHVMHLEFRVTHSGMGLPEELVHEMFDRGRGMTQEGLGLSMCRKLVKLMNGNV 1097

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            QYI+E  + YFLV + LPLAQR+D GS R
Sbjct: 1098 QYIRETGKSYFLVEVELPLAQRDDAGSVR 1126


>gb|AAM94952.1| phytochrome [Physcomitrella patens]
          Length = 1126

 Score =  265 bits (677), Expect = 3e-68
 Identities = 125/209 (59%), Positives = 161/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL+EDQ+Q +ETS  CERQ++KV+DDMDLESIEDGY+ELDT +F +G ++DAVVSQG
Sbjct: 918  EDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDGYLELDTNEFVMGTVMDAVVSQG 977

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTPPQ-GWVAIKVLPL 357
            MI  REK +QLIR+ P ++K +C+FGDQ RLQQ+LADFLLNA++FTP   GWV IKV+P 
Sbjct: 978  MITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLLNAVKFTPSSGGWVGIKVVPT 1037

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGGG+H +HLE R+TH G GLP EL+ ++FD  +   QEG+G          MNG V
Sbjct: 1038 KKRLGGGIHVMHLEFRVTHSGMGLPEELVHEMFDRGRGMTQEGLGLSMCRKLVKLMNGNV 1097

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            QYI+E  + YFLV + LPLAQR+D GS R
Sbjct: 1098 QYIRETGKSYFLVEVELPLAQRDDAGSVR 1126


>gb|ABW91071.1| phytochrome-4 [Ceratodon purpureus]
          Length = 1125

 Score =  264 bits (675), Expect = 6e-68
 Identities = 123/209 (58%), Positives = 163/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL+++QKQ ++TS  CERQ++K++DDMDLESIEDGY+EL+T +F +G ++DAVVSQG
Sbjct: 917  EDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESIEDGYLELETAEFEMGSMMDAVVSQG 976

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            M+  REK +QLIR+ P ++K +C+FGDQ RLQQ+LADFLLNA+RFTP  +GWV IKV+P 
Sbjct: 977  MVTSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLLNAVRFTPSSEGWVGIKVVPT 1036

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGGG H VHLE R+THPGSGLP EL+ ++FD  +   QEG+G          MNGEV
Sbjct: 1037 KKRLGGGFHVVHLEFRVTHPGSGLPEELVHEMFDRGRGMTQEGLGLSMCRKLVKLMNGEV 1096

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            +YI++  + YFLVNL LPL  R+D GS R
Sbjct: 1097 KYIRDTGKSYFLVNLELPLTVRDDAGSVR 1125


>dbj|BAB39687.1| phytochrome [Marchantia paleacea subsp. diptera]
          Length = 1126

 Score =  262 bits (670), Expect = 2e-67
 Identities = 123/209 (58%), Positives = 161/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E+++LTE+QKQ IETS  CERQ+++++DDMDLESIEDGY+ELDT +F +G ++DAV+SQG
Sbjct: 918  EDTNLTEEQKQFIETSALCERQLRRILDDMDLESIEDGYLELDTAEFIMGTVMDAVISQG 977

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI  REK +QLI D P D K +C+FGDQ RLQQ+LADFLLNAIRFTP  +GWV IK +  
Sbjct: 978  MITSREKGLQLIWDTPRDTKNLCLFGDQVRLQQVLADFLLNAIRFTPSSEGWVGIKGVSS 1037

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
              + GGG+H VH E R+THPG+GLP EL+Q++FD  +   QEG+G          M+G+V
Sbjct: 1038 RHRQGGGVHVVHFEFRVTHPGAGLPEELVQEMFDRGRGMTQEGLGLNMCRKLLKLMSGDV 1097

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            QYI+E  +CYFLVN+ LP+AQR+D GS +
Sbjct: 1098 QYIREAGKCYFLVNVELPIAQRDDAGSVK 1126


>ref|XP_002991119.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
            gi|300141213|gb|EFJ07927.1| hypothetical protein
            SELMODRAFT_161430 [Selaginella moellendorffii]
          Length = 1143

 Score =  258 bits (659), Expect = 4e-66
 Identities = 121/209 (57%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E +DL+EDQKQ +ET   CE+Q++K++DDMDLESIEDGY+ELDT +F +G ++DAV+SQG
Sbjct: 930  ETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDGYLELDTTEFMMGTVMDAVISQG 989

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI  +EK++QLIR+ P ++K + ++GDQ RLQQ+LADFLLNAIRFTP  + WV IKV   
Sbjct: 990  MITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADFLLNAIRFTPSSENWVGIKVATS 1049

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGGG+H +HLE RITHPG GLP EL+Q++FD  +   QEG+G          MNGEV
Sbjct: 1050 RKRLGGGVHVMHLEFRITHPGVGLPEELVQEMFDRGRGMTQEGLGLSMCRKLVKLMNGEV 1109

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            +Y++EP + +FLV+L LPLAQR+D GS +
Sbjct: 1110 EYLREPGKNFFLVSLELPLAQRDDAGSVK 1138


>ref|XP_002991641.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
            gi|300140490|gb|EFJ07212.1| hypothetical protein
            SELMODRAFT_161807 [Selaginella moellendorffii]
          Length = 1142

 Score =  258 bits (659), Expect = 4e-66
 Identities = 121/209 (57%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E +DL+EDQKQ +ET   CE+Q++K++DDMDLESIEDGY+ELDT +F +G ++DAV+SQG
Sbjct: 929  ETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDGYLELDTTEFMMGTVMDAVISQG 988

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI  +EK++QLIR+ P ++K + ++GDQ RLQQ+LADFLLNAIRFTP  + WV IKV   
Sbjct: 989  MITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADFLLNAIRFTPSSENWVGIKVATS 1048

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGGG+H +HLE RITHPG GLP EL+Q++FD  +   QEG+G          MNGEV
Sbjct: 1049 RKRLGGGVHVMHLEFRITHPGVGLPEELVQEMFDRGRGMTQEGLGLSMCRKLVKLMNGEV 1108

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            +Y++EP + +FLV+L LPLAQR+D GS +
Sbjct: 1109 EYLREPGKNFFLVSLELPLAQRDDAGSVK 1137


>ref|XP_001754366.1| phytochrome 5c [Physcomitrella patens] gi|162694468|gb|EDQ80816.1|
            phytochrome 5c [Physcomitrella patens]
          Length = 1124

 Score =  257 bits (657), Expect = 7e-66
 Identities = 123/209 (58%), Positives = 163/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL+E+QKQ ++TS  CERQ++K++DDMDLESIEDGY+EL+T +F +G ++DAVVSQG
Sbjct: 916  EDTDLSEEQKQFMDTSAVCERQLRKILDDMDLESIEDGYLELETAEFDMGSMMDAVVSQG 975

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI  REK +QLIR+ P ++K +C+FGDQ RLQQ+LAD+LLNA+RFTP  +GWV IKV+  
Sbjct: 976  MITSREKGLQLIRETPREIKGMCLFGDQVRLQQVLADYLLNAVRFTPSSEGWVGIKVVST 1035

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+L GG H VHLE R+THPGSGLP EL+ ++FD  +   QEG+G          MNGEV
Sbjct: 1036 KKRLVGGFHVVHLEFRVTHPGSGLPEELVCEMFDRGRGMTQEGLGLSMCRKLVKLMNGEV 1095

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            +YI++  + YFLVNL LPLA R+D G+AR
Sbjct: 1096 KYIRDAGKSYFLVNLELPLAGRDDSGNAR 1124


>ref|XP_001761145.1| phytochrome 5a [Physcomitrella patens] gi|162687485|gb|EDQ73867.1|
            phytochrome 5a [Physcomitrella patens]
          Length = 1123

 Score =  257 bits (657), Expect = 7e-66
 Identities = 122/209 (58%), Positives = 160/209 (76%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL++DQKQ ++TS  CERQ++K++DDMDLESIEDGY+EL+T +F +G ++DAVVSQG
Sbjct: 915  EDTDLSDDQKQFMDTSAVCERQLRKILDDMDLESIEDGYLELETAEFEMGSMMDAVVSQG 974

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            M+  REK +QLIR+ P ++K +C+FGDQ RLQQ+LADFLLNA+RFTP  +GWV IKV+  
Sbjct: 975  MVTSREKGLQLIRETPREIKDMCLFGDQVRLQQVLADFLLNAVRFTPSSEGWVGIKVVAT 1034

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             ++LGGG H VHLE R+THPGSGLP ELI ++FD  +   QEG+G          MNG V
Sbjct: 1035 KRRLGGGFHVVHLEFRVTHPGSGLPEELIHEMFDRGRGMTQEGLGLNMCRKLVKLMNGNV 1094

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            QY +E  + YFLV L LPLA R+D G+ R
Sbjct: 1095 QYKRETGKSYFLVTLELPLAVRDDTGTMR 1123


>gb|AAM94954.1| phytochrome [Physcomitrella patens]
          Length = 1130

 Score =  256 bits (653), Expect = 2e-65
 Identities = 120/210 (57%), Positives = 161/210 (76%), Gaps = 1/210 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL+ DQ+QL+ETS  CERQ++K++DD+DLESIEDGY+ELDT +F +G ++DAVVSQG
Sbjct: 918  EDTDLSVDQRQLVETSAVCERQLRKILDDLDLESIEDGYLELDTTEFEMGTVMDAVVSQG 977

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI  REK +QLIR+ P ++K +C++GDQ RLQQ+LADFLLNA+RFTP  +GWV IKV+P 
Sbjct: 978  MITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLADFLLNAVRFTPSSEGWVGIKVVPT 1037

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LG G+H +H+E R+THPG GLP EL+ ++F   +   QEG+G          MNG V
Sbjct: 1038 KKRLGRGVHVMHVEFRVTHPGLGLPEELVHEMFGRGRGMTQEGLGLSMCRKLVKLMNGTV 1097

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSARA 627
            QYI+E  +  FLV + LPLAQR+D GS R+
Sbjct: 1098 QYIRETGKSCFLVEVELPLAQRDDAGSVRS 1127


>ref|XP_001782339.1| phytochrome 2 [Physcomitrella patens] gi|139001623|dbj|BAF51708.1|
            phytochrome2 [Physcomitrella patens]
            gi|162666198|gb|EDQ52859.1| phytochrome 2 [Physcomitrella
            patens]
          Length = 1130

 Score =  255 bits (652), Expect = 3e-65
 Identities = 120/210 (57%), Positives = 160/210 (76%), Gaps = 1/210 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL+ DQ+Q +ETS  CERQ++K++DD+DLESIEDGY+ELDT +F +G ++DAVVSQG
Sbjct: 918  EDTDLSVDQRQFVETSAVCERQLRKILDDLDLESIEDGYLELDTTEFEMGTVMDAVVSQG 977

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI  REK +QLIR+ P ++K +C++GDQ RLQQ+LADFLLNA+RFTP  +GWV IKV+P 
Sbjct: 978  MITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLADFLLNAVRFTPSSEGWVGIKVVPT 1037

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LG G+H +HLE R+THPG GLP EL+ ++F   +   QEG+G          MNG V
Sbjct: 1038 KKRLGRGVHVMHLEFRVTHPGLGLPEELVHEMFGRGRGMTQEGLGLSMCRKLVKLMNGTV 1097

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSARA 627
            QYI+E  +  FLV + LPLAQR+D GS R+
Sbjct: 1098 QYIRETGKSCFLVEVELPLAQRDDAGSVRS 1127


>ref|XP_001767224.1| phytochrome 5b3 [Physcomitrella patens] gi|162681479|gb|EDQ67905.1|
            phytochrome 5b3 [Physcomitrella patens]
          Length = 1131

 Score =  254 bits (650), Expect = 4e-65
 Identities = 119/209 (56%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL+++QKQ ++TS  CERQ++K++DDMDLESIEDGY+EL+T++F +G ++DAVVSQG
Sbjct: 916  EDTDLSDEQKQYMDTSAVCERQLRKILDDMDLESIEDGYLELETMEFEMGSMMDAVVSQG 975

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            M+  REK +QLIR+ P +++ +C+FGDQ RLQQ+LADFLLNA+RFTP  +GWV IKV+P 
Sbjct: 976  MVTSREKGLQLIRETPREIQGMCLFGDQVRLQQVLADFLLNAVRFTPSSEGWVGIKVVPT 1035

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGGG H VHLE R+THPGSGLP EL+ ++FD  +   QEG+G          MNGEV
Sbjct: 1036 RKRLGGGFHVVHLEFRVTHPGSGLPEELVHEMFDRGRGMTQEGLGLSMCRKLVKLMNGEV 1095

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            +YI++  +  FLV+L LPL   +D GS R
Sbjct: 1096 KYIRDTGKSCFLVSLELPLTVSDDAGSVR 1124


>sp|Q01549.1|PHY1_SELMA RecName: Full=Phytochrome 1 gi|22603|emb|CAA43698.1| phytochrome
            [Selaginella martensii]
          Length = 1134

 Score =  254 bits (648), Expect = 7e-65
 Identities = 121/209 (57%), Positives = 160/209 (76%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E +DL+EDQKQ +ET   CE+Q++K++DDMDLESIEDGY+ELDT +F +G ++DAV+SQG
Sbjct: 921  ETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDGYLELDTTEFMMGTVMDAVISQG 980

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            MI  +EK++QLIR+ P ++K + ++GDQ RLQQ+LADFLLNAIRFTP  + WV IKV   
Sbjct: 981  MITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADFLLNAIRFTPSSENWVGIKVATS 1040

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGG +H +HLE RITHPG GLP EL+Q++FD  +   QEG+G          MNGEV
Sbjct: 1041 RKRLGGVVHVMHLEFRITHPGVGLPEELVQEMFDRGRGMTQEGLGLSMCRKLVKLMNGEV 1100

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
            +YI+E  + YFLV+L LPLAQR+D GS +
Sbjct: 1101 EYIREAGKNYFLVSLELPLAQRDDAGSVK 1129


>prf||1709211A phytochrome
          Length = 267

 Score =  254 bits (648), Expect = 7e-65
 Identities = 121/209 (57%), Positives = 160/209 (76%), Gaps = 1/209 (0%)
 Frame = +1

Query: 1   EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
           E +DL+EDQKQ +ET   CE+Q++K++DDMDLESIEDGY+ELDT +F +G ++DAV+SQG
Sbjct: 54  ETTDLSEDQKQYVETGTVCEKQIRKILDDMDLESIEDGYLELDTTEFMMGTVMDAVISQG 113

Query: 181 MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
           MI  +EK++QLIR+ P ++K + ++GDQ RLQQ+LADFLLNAIRFTP  + WV IKV   
Sbjct: 114 MITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADFLLNAIRFTPSSENWVGIKVATS 173

Query: 358 IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
            K+LGG +H +HLE RITHPG GLP EL+Q++FD  +   QEG+G          MNGEV
Sbjct: 174 RKRLGGVVHVMHLEFRITHPGVGLPEELVQEMFDRGRGMTQEGLGLSMCRKLVKLMNGEV 233

Query: 538 QYIKEPEQCYFLVNLNLPLAQREDVGSAR 624
           +YI+E  + YFLV+L LPLAQR+D GS +
Sbjct: 234 EYIREAGKNYFLVSLELPLAQRDDAGSVK 262


>sp|Q39557.1|PHY2_CERPU RecName: Full=Phytochrome 2 gi|1314837|gb|AAB67863.1| phytochrome
            photoreceptor CERPU;PHY0;2 [Ceratodon purpureus]
          Length = 1121

 Score =  251 bits (641), Expect = 5e-64
 Identities = 115/207 (55%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL++DQKQ ++TS  CE+Q+QKV++DMDLESIEDGY+ELDT +F +G ++DAV+SQG
Sbjct: 913  EDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMDAVISQG 972

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            M   REK +Q+IR+ P ++ T+ +FGDQ RLQQ+L+DFL+NAIRFTP  +GWV IKV+P 
Sbjct: 973  MTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDFLINAIRFTPSSEGWVKIKVVPT 1032

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGG +H +HLE R++HPG GLP EL+ +++D  K   QEG+G          MNG+V
Sbjct: 1033 RKRLGGNVHVMHLEFRVSHPGGGLPDELVLEMYDRAKGMTQEGLGLNMCRKLVRLMNGDV 1092

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGS 618
            QY++E  QCYF+V + LP+AQR+D  S
Sbjct: 1093 QYVRENAQCYFVVYVELPMAQRDDAAS 1119


>gb|AAB19058.1| phytochrome photoreceptor [Ceratodon purpureus]
          Length = 1121

 Score =  250 bits (639), Expect = 8e-64
 Identities = 115/207 (55%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL++DQKQ ++TS  CE+Q+QKV++DMDLESIEDGY+ELDT +F +G ++DAV+SQG
Sbjct: 913  EDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMDAVISQG 972

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            M   REK +Q+IR+ P ++ T+ +FGDQ RLQQ+L+DFL+NAIRFTP  +GWV IKV+P 
Sbjct: 973  MTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDFLINAIRFTPSSEGWVKIKVVPT 1032

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGG +H +HLE R++HPG GLP EL+ +++D  K   QEG+G          MNG+V
Sbjct: 1033 RKRLGGNVHVMHLEFRVSHPGGGLPDELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDV 1092

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGS 618
            QY++E  QCYF+V + LP+AQR+D  S
Sbjct: 1093 QYVRENAQCYFVVYVELPMAQRDDAAS 1119


>ref|XP_001778155.1| phytochrome 1 [Physcomitrella patens] gi|139001617|dbj|BAF51707.1|
            phytochrome1 [Physcomitrella patens]
            gi|162670477|gb|EDQ57045.1| phytochrome 1 [Physcomitrella
            patens]
          Length = 1123

 Score =  248 bits (633), Expect = 4e-63
 Identities = 112/207 (54%), Positives = 159/207 (76%), Gaps = 1/207 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL++DQ+Q ++TS  CE+Q+QKV++DMDLESIEDGY+ELDT +F +G +++AV+SQG
Sbjct: 915  EDTDLSDDQQQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQG 974

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            M   REK +Q+ R+ P ++ T+ + GDQ RLQQ+L+DFLLN +RFTP P+GWV IKV+P 
Sbjct: 975  MTTSREKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKIKVVPT 1034

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGG +H VHLE R++HPG+GLP EL+ +++D  K   QEG+G          MNG+V
Sbjct: 1035 RKRLGGSVHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDV 1094

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGS 618
             Y++E  QCYF+VN+ LP+AQR+D  S
Sbjct: 1095 HYVREAMQCYFVVNVELPMAQRDDASS 1121


>gb|AAM94953.1| phytochrome [Physcomitrella patens]
          Length = 1123

 Score =  248 bits (633), Expect = 4e-63
 Identities = 112/207 (54%), Positives = 159/207 (76%), Gaps = 1/207 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL++DQ+Q ++TS  CE+Q+QKV++DMDLESIEDGY+ELDT +F +G +++AV+SQG
Sbjct: 915  EDTDLSDDQQQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQG 974

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            M   REK +Q+ R+ P ++ T+ + GDQ RLQQ+L+DFLLN +RFTP P+GWV IKV+P 
Sbjct: 975  MTTSREKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKIKVVPT 1034

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGG +H VHLE R++HPG+GLP EL+ +++D  K   QEG+G          MNG+V
Sbjct: 1035 RKRLGGSVHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDV 1094

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGS 618
             Y++E  QCYF+VN+ LP+AQR+D  S
Sbjct: 1095 HYVREAMQCYFVVNVELPMAQRDDASS 1121


>sp|P36505.1|PHY1_PHYPA RecName: Full=Phytochrome 1 gi|402606|emb|CAA52933.1| phytochrome
            [Physcomitrella patens]
          Length = 1132

 Score =  246 bits (627), Expect = 2e-62
 Identities = 111/207 (53%), Positives = 158/207 (76%), Gaps = 1/207 (0%)
 Frame = +1

Query: 1    EESDLTEDQKQLIETSIACERQMQKVMDDMDLESIEDGYMELDTIDFFLGPIIDAVVSQG 180
            E++DL++DQ+Q ++TS  CE+Q+QK ++DMDLESIEDGY+ELDT +F +G +++AV+SQG
Sbjct: 915  EDTDLSDDQQQFLDTSAVCEQQLQKSLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQG 974

Query: 181  MIALREKDIQLIRDIPDDVKTICVFGDQTRLQQILADFLLNAIRFTP-PQGWVAIKVLPL 357
            M   REK +Q+ R+ P ++ T+ + GDQ RLQQ+L+DFLLN +RFTP P+GWV IKV+P 
Sbjct: 975  MTTSREKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKIKVVPT 1034

Query: 358  IKQLGGGLHTVHLEIRITHPGSGLPAELIQDLFDGTKRANQEGVGXXXXXXXXXXMNGEV 537
             K+LGG +H VHLE R++HPG+GLP EL+ +++D  K   QEG+G          MNG+V
Sbjct: 1035 RKRLGGSVHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDV 1094

Query: 538  QYIKEPEQCYFLVNLNLPLAQREDVGS 618
             Y++E  QCYF+VN+ LP+AQR+D  S
Sbjct: 1095 HYVREAMQCYFVVNVELPMAQRDDASS 1121