BLASTX nr result
ID: Ephedra26_contig00013564
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00013564
(1050 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm... 236 9e-60
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C... 232 2e-58
ref|XP_006468662.1| PREDICTED: ribonuclease H2 subunit B-like [C... 232 2e-58
emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera] 231 4e-58
ref|XP_006448513.1| hypothetical protein CICLE_v10016172mg [Citr... 231 5e-58
gb|EOY25342.1| Subunit B [Theobroma cacao] 230 8e-58
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ... 229 1e-57
ref|XP_004239098.1| PREDICTED: ribonuclease H2 subunit B-like [S... 224 3e-56
ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like is... 223 1e-55
ref|XP_006845197.1| hypothetical protein AMTR_s00005p00247650 [A... 222 2e-55
ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like is... 221 5e-55
ref|XP_006413878.1| hypothetical protein EUTSA_v10025951mg [Eutr... 217 5e-54
ref|XP_002446662.1| hypothetical protein SORBIDRAFT_06g020030 [S... 216 2e-53
ref|XP_004975957.1| PREDICTED: ribonuclease H2 subunit B-like [S... 215 3e-53
ref|NP_001136505.1| hypothetical protein [Zea mays] gi|194695968... 215 3e-53
ref|XP_006284288.1| hypothetical protein CARUB_v10005457mg [Caps... 214 3e-53
ref|XP_002869938.1| hypothetical protein ARALYDRAFT_329539 [Arab... 214 5e-53
ref|XP_004501219.1| PREDICTED: ribonuclease H2 subunit B-like is... 213 1e-52
ref|NP_001078412.2| ribonuclease H2 subunit B domain-containing ... 213 1e-52
gb|EXC32751.1| putative nucleoredoxin 3 [Morus notabilis] 212 2e-52
>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
gi|223543075|gb|EEF44610.1| conserved hypothetical
protein [Ricinus communis]
Length = 299
Score = 236 bits (603), Expect = 9e-60
Identities = 117/275 (42%), Positives = 175/275 (63%)
Frame = +2
Query: 65 DNRVLIVHSLESEAVGVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWF 244
+ R+LI HS ++ VG R L L HPKSG +T Y+L N LQELHWFKQ Y SWF
Sbjct: 34 ETRLLIAHSANADGVG-------RLLSLQHPKSGKTTCYLLNNRMLQELHWFKQSYTSWF 86
Query: 245 LGNDVCEDGSLYIATPVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLY 424
LG+ VC+DG LY ATPVDP+FI+LP+ ++ARM+KGDDPGKFR L++ILF+ GYP YR L
Sbjct: 87 LGDYVCQDGCLYSATPVDPVFILLPIFEEARMRKGDDPGKFRQLDEILFINGYPGYRYLM 146
Query: 425 PLMHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAV 604
P+ + + +CE+K++ S ++RL++ K+ AWL CKV+QL + + +L+++YA ++E + +
Sbjct: 147 PIAENCMQVVCEIKEIGSSKFFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNTL 206
Query: 605 SDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKS 784
+DAI LGEYLK++PW ++ R +L ++ S+L ++
Sbjct: 207 ADAIMILGEYLKDEPW--LKLLCNHLKLNLLEATRKVPDAETSLTENNPASSNL---MQE 261
Query: 785 KGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKKS 889
KGK K + + + KV+ + L I MF ++
Sbjct: 262 KGKNDGKTKRTGKQAKKAKVETESL-NIREMFSRA 295
>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
H2 subunit B-like [Cucumis sativus]
Length = 281
Score = 232 bits (592), Expect = 2e-58
Identities = 121/263 (46%), Positives = 162/263 (61%), Gaps = 3/263 (1%)
Frame = +2
Query: 110 GVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIAT 289
GV N++G FL L HPKSG T ++ +N+ L+E+HWFKQ Y+SWFLG+ V EDG LY AT
Sbjct: 19 GVKENVTGCFLSLRHPKSGNPTCFLYVNEMLEEIHWFKQSYSSWFLGDYVAEDGRLYSAT 78
Query: 290 PVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 469
PVDP+FI LP+ ++ARMKKGDD GKFR L+DI+F+ GYP Y L PL + +CEVK+
Sbjct: 79 PVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFINGYPGYLHLLPLAEKFMQVVCEVKE 138
Query: 470 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 649
V S ++RLD+ K++AWL KV QL TL TL+++YA R E + + DA+ LGEYLK+ P
Sbjct: 139 VGSSRFFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAREEKETLCDAVSILGEYLKDQP 198
Query: 650 W-XXXXXXXXXXXXETIKKPRMKE--PTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASR 820
W E +K E PT + FDS + D GS G +N
Sbjct: 199 WLKLLCDHLKLNFAEATRKASDSERAPTSIENNFDS-ISQDKSGSRSGSGAKNTRN---- 253
Query: 821 GRPSQKKVDEKGLQKITSMFKKS 889
G+ ++K E + I MF K+
Sbjct: 254 GKQAKKPKVETESRNIKDMFSKA 276
>ref|XP_006468662.1| PREDICTED: ribonuclease H2 subunit B-like [Citrus sinensis]
Length = 283
Score = 232 bits (591), Expect = 2e-58
Identities = 115/269 (42%), Positives = 176/269 (65%), Gaps = 4/269 (1%)
Frame = +2
Query: 95 ESEAVGVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGS 274
+S A G + GR L LCHPKSG T Y+L++ LQEL+W KQ Y SWFLGN VCEDGS
Sbjct: 17 DSSATG---SSGGRLLSLCHPKSGQKTCYLLVDGVLQELNWLKQSYKSWFLGNYVCEDGS 73
Query: 275 LYIATPVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAI 454
+Y ATP+DP+FI+LP+ ++AR+KKG+DPGKFR L++I+F++GYP Y+ + PL + + +
Sbjct: 74 IYAATPIDPVFIMLPIFEEARLKKGEDPGKFRQLDEIIFIDGYPGYQYILPLAENCMQVV 133
Query: 455 CEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEY 634
CEVK++ S ++RLD+ K+IAWL CKV L +TL L+++YA ++E D +++A+ LGEY
Sbjct: 134 CEVKEIGSSKFFRLDDLKVIAWLYCKVCVLKQTLSVLDQNYAAQDEKDTLANAVSILGEY 193
Query: 635 LKEDPW--XXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGS--LKSKGKTTQ 802
+K++PW ET K P ++ F S L+S++ S L+ + K+ +
Sbjct: 194 VKDEPWLKLLCKHLNLDLLKETGKAPCIE-------VFPSSLESNVGSSNLLQERRKSDR 246
Query: 803 KNSASRGRPSQKKVDEKGLQKITSMFKKS 889
K + + G+ ++ E + I MF ++
Sbjct: 247 KTNRT-GKETKMAKPETESRNIKEMFSRA 274
>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
Length = 277
Score = 231 bits (589), Expect = 4e-58
Identities = 114/265 (43%), Positives = 169/265 (63%), Gaps = 4/265 (1%)
Frame = +2
Query: 107 VGVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIA 286
V + N G+FL L HPKSG +T Y+ N +LQEL+WFKQ Y SWFLG+ VCEDG LY A
Sbjct: 18 VNAIGNGLGQFLSLRHPKSGKATCYLFKNGTLQELNWFKQSYGSWFLGDYVCEDGRLYTA 77
Query: 287 TPVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVK 466
T VDP+FI+LP+ ++ARMKK DDPGKFR L++I+F+ YP Y+ L P+ + + +CE+K
Sbjct: 78 TIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQHLIPIAENCMQVVCEIK 137
Query: 467 DVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKED 646
++ S ++RLD+ K++AWLC KV+QL + LPTL+++YA R++ D ++DAI LGEYL+++
Sbjct: 138 EIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDE 197
Query: 647 PWXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSH---LDSDLPGSLKSKGKTTQKNSAS 817
PW K + + T + H D+ L S + +GK+ + +
Sbjct: 198 PWLKLLCDHL--------KLNLLDATMKAXVIEFHPTAPDNSLGSSNQLQGKSGNERKTT 249
Query: 818 R-GRPSQKKVDEKGLQKITSMFKKS 889
R G+ +K EK + I MF ++
Sbjct: 250 RPGKQPKKAKVEKDSRNIKDMFSRA 274
>ref|XP_006448513.1| hypothetical protein CICLE_v10016172mg [Citrus clementina]
gi|557551124|gb|ESR61753.1| hypothetical protein
CICLE_v10016172mg [Citrus clementina]
Length = 283
Score = 231 bits (588), Expect = 5e-58
Identities = 112/267 (41%), Positives = 173/267 (64%), Gaps = 2/267 (0%)
Frame = +2
Query: 95 ESEAVGVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGS 274
+S A G + GR L LCHPKSG T Y+L++ LQEL+W KQ Y SWFLGN VCEDGS
Sbjct: 17 DSSATG---SSGGRLLSLCHPKSGQKTCYLLVDGVLQELNWLKQSYKSWFLGNYVCEDGS 73
Query: 275 LYIATPVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAI 454
+Y ATP+DP+FI+LP+ ++AR+KKG+DPGKFR L++I+F++GYP Y+ L PL + + +
Sbjct: 74 IYAATPIDPVFIMLPIFEEARLKKGEDPGKFRQLDEIIFIDGYPGYQYLLPLAENCMQVV 133
Query: 455 CEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEY 634
CEVK++ S ++RLD+ K++AWL CKV L +TL L+++YA ++E D +++A+ LGEY
Sbjct: 134 CEVKEIGSSKFFRLDDLKVLAWLYCKVCVLKQTLSVLDQNYAAQDEKDTLANAVSILGEY 193
Query: 635 LKEDPWXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGS--LKSKGKTTQKN 808
+K++ W + P+ P F S L+S++ S L+ + K+ +K
Sbjct: 194 VKDESWLKLLCKHL-----NLDLPKETGKAPYIEVFPSSLESNVGSSNLLQERRKSDRKT 248
Query: 809 SASRGRPSQKKVDEKGLQKITSMFKKS 889
+ + G+ ++ E + I MF ++
Sbjct: 249 NRT-GKETKMAKPETESRNIKEMFSRA 274
>gb|EOY25342.1| Subunit B [Theobroma cacao]
Length = 280
Score = 230 bits (586), Expect = 8e-58
Identities = 120/279 (43%), Positives = 173/279 (62%), Gaps = 4/279 (1%)
Frame = +2
Query: 65 DNRVLIVHSLESEAVGVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWF 244
++R+LI S G S R + L HPKSG++T+Y+L N LQELHWFKQ Y SWF
Sbjct: 10 ESRLLIAPDPGSNGDG-----SARLISLRHPKSGVTTSYLLSNRLLQELHWFKQSYGSWF 64
Query: 245 LGNDVCEDGSLYIATPVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLY 424
LG+ V EDGSLY ATP+DP+FI+LP+ ++ARMKK DDPGKFR L++ILF+ YP YR L+
Sbjct: 65 LGDYVSEDGSLYTATPIDPVFIMLPIFEEARMKKVDDPGKFRQLDEILFINDYPGYRHLF 124
Query: 425 PLMHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAV 604
+ + + +CE+K++ S ++RLD+ K++AWL KV QL +TLP L+++YA R+E D
Sbjct: 125 SIAENCMQVVCEIKEIGSSKFFRLDDTKVLAWLNYKVCQLKQTLPALDQNYAARDEKDTS 184
Query: 605 SDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPRMKEPTPMNLAFD---SHLDSDLPGS 775
+DAI +GEYLK +PW K + E T + F+ + ++S + S
Sbjct: 185 ADAISIIGEYLKHEPWLKLLSNHF--------KLNLLEATRIASDFEACSNAIESPMGAS 236
Query: 776 LKSKGKTTQKNSASRGRPSQKKVD-EKGLQKITSMFKKS 889
S+GKT + +R + KK E + I MF ++
Sbjct: 237 NPSQGKTRGEKKTARNQKQAKKAKIETESRNIKEMFSRA 275
>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
gi|296081827|emb|CBI20832.3| unnamed protein product
[Vitis vinifera]
Length = 277
Score = 229 bits (584), Expect = 1e-57
Identities = 113/265 (42%), Positives = 168/265 (63%), Gaps = 4/265 (1%)
Frame = +2
Query: 107 VGVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIA 286
V + N G+FL HPKSG +T Y+ N +LQEL+WFKQ Y SWFLG+ VCEDG LY A
Sbjct: 18 VNAIGNGLGQFLSFRHPKSGKATCYLFKNGTLQELNWFKQSYGSWFLGDYVCEDGRLYTA 77
Query: 287 TPVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVK 466
T VDP+FI+LP+ ++ARMKK DDPGKFR L++I+F+ YP Y+ L P+ + + +CE+K
Sbjct: 78 TIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQHLIPIAENCMQVVCEIK 137
Query: 467 DVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKED 646
++ S ++RLD+ K++AWLC KV+QL + LPTL+++YA R++ D ++DAI LGEYL+++
Sbjct: 138 EIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDE 197
Query: 647 PWXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSH---LDSDLPGSLKSKGKTTQKNSAS 817
PW K + + T + H D+ L S + +GK+ + +
Sbjct: 198 PWLKLLCDHL--------KLNLLDATMKASVIEFHPTAPDNSLGSSNQLQGKSGNERKTT 249
Query: 818 R-GRPSQKKVDEKGLQKITSMFKKS 889
R G+ +K EK + I MF ++
Sbjct: 250 RPGKQPKKAKVEKDSRNIKDMFSRA 274
>ref|XP_004239098.1| PREDICTED: ribonuclease H2 subunit B-like [Solanum lycopersicum]
Length = 333
Score = 224 bits (572), Expect = 3e-56
Identities = 107/255 (41%), Positives = 165/255 (64%), Gaps = 3/255 (1%)
Frame = +2
Query: 134 RFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIATPVDPIFII 313
+ L L HPKSG +T Y+ +++SLQELHWFKQ Y SWFLG+ VCEDG LY ATPVDP+F++
Sbjct: 81 QLLSLRHPKSGNATCYLCVDESLQELHWFKQSYGSWFLGDYVCEDGRLYTATPVDPVFVL 140
Query: 314 LPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYR 493
LP+ D+ARMKK DDPGKFR +++I+++ GYP Y+ L + + + +C+VKDV ++R
Sbjct: 141 LPIFDEARMKKNDDPGKFRQVDEIIYVVGYPGYQHLSSIAENCMQVVCDVKDVGMTKFFR 200
Query: 494 LDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXX 673
L+++K++ WLC KV QL +TL TL+++YA R++ + ++DA+ +GEYLKE+PW
Sbjct: 201 LNDEKVLKWLCLKVIQLKKTLLTLDKNYAARDKKEILTDAVSIVGEYLKEEPWLKLLCSK 260
Query: 674 XXXXXETIKKPRMKE--PTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVD 847
+ K E +PM+ +F+S + + +GK+ + +R + KK+
Sbjct: 261 LSIDLQEDTKASNSEMHSSPMDYSFESF-------NHEQEGKSEGQEKTTRNKRQTKKIK 313
Query: 848 -EKGLQKITSMFKKS 889
E I MF ++
Sbjct: 314 VETNSLNIKDMFSRA 328
>ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like isoform X1 [Solanum
tuberosum]
Length = 333
Score = 223 bits (567), Expect = 1e-55
Identities = 107/254 (42%), Positives = 165/254 (64%), Gaps = 2/254 (0%)
Frame = +2
Query: 134 RFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIATPVDPIFII 313
+ L L HPKSG +T Y+ ++ SLQELHWFKQ Y SWFLG+ VCEDG LY ATPVDP+F++
Sbjct: 81 QLLSLRHPKSGNATCYLCVDGSLQELHWFKQSYGSWFLGDYVCEDGRLYTATPVDPVFVL 140
Query: 314 LPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYR 493
LP+ ++ARMKK DDPGKFR +++I+++ GYP Y+ L + + + +C+VKDV ++R
Sbjct: 141 LPIFEEARMKKNDDPGKFRQVDEIIYVVGYPGYQHLSSIAENCMQVVCDVKDVGMTKFFR 200
Query: 494 LDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXX 673
L+++K++ WLC KV QL +TL TL+++YA R++ + ++DA+ +GEYLKE+PW
Sbjct: 201 LNDEKVLKWLCLKVIQLKKTLLTLDKNYAARDKKEILTDAVSIIGEYLKEEPWLKLLCSK 260
Query: 674 XXXXXETIKKPRMKE--PTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVD 847
+ K E +PM+ +F+S + + G+ + + K T+ RP++K
Sbjct: 261 LSIDLQEDTKASNSEMHSSPMDNSFES-FNHEQQGNSEGQEKATKSK-----RPTKKIKA 314
Query: 848 EKGLQKITSMFKKS 889
E I MF ++
Sbjct: 315 ETNSLNIKDMFSRA 328
>ref|XP_006845197.1| hypothetical protein AMTR_s00005p00247650 [Amborella trichopoda]
gi|548847710|gb|ERN06872.1| hypothetical protein
AMTR_s00005p00247650 [Amborella trichopoda]
Length = 251
Score = 222 bits (566), Expect = 2e-55
Identities = 115/252 (45%), Positives = 158/252 (62%)
Frame = +2
Query: 134 RFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIATPVDPIFII 313
R L ++G + Y+ + LQELHWFKQ Y SWF+G+ +CEDG +Y+ATPVDP+FI+
Sbjct: 7 RNLHFTIKETGKPSCYLFTDGLLQELHWFKQSYGSWFIGDYICEDGGIYVATPVDPVFIL 66
Query: 314 LPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYR 493
LPL +ARMKKGD+ GKFR ++DI+F++GYP YR L P++ + L AICEVK+V S + R
Sbjct: 67 LPLFHEARMKKGDELGKFRQVDDIMFVDGYPGYRYLLPVVSNSLQAICEVKEVGSEIFCR 126
Query: 494 LDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXX 673
LD+ K++AWL CKVN L LPTL+++YA R+E D + DA+ LGEYL E+PW
Sbjct: 127 LDDSKVVAWLHCKVNNLKLVLPTLDKNYAVRDEKDTLRDAVSLLGEYLSEEPWIRLLCSH 186
Query: 674 XXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVDEK 853
+ K + + P +A +S L D KG+T GR S+KK E
Sbjct: 187 LSISLDYAVKSDVIDILP--IASESTLVQD------EKGRT----RTGTGRQSKKKKTET 234
Query: 854 GLQKITSMFKKS 889
G I MF+K+
Sbjct: 235 GSLNIKDMFRKA 246
>ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like isoform X2 [Solanum
tuberosum]
Length = 332
Score = 221 bits (562), Expect = 5e-55
Identities = 107/254 (42%), Positives = 164/254 (64%), Gaps = 2/254 (0%)
Frame = +2
Query: 134 RFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIATPVDPIFII 313
+ L L HPKSG +T Y+ ++ SLQELHWFKQ Y SWFLG+ VCEDG LY ATPVDP+F++
Sbjct: 81 QLLSLRHPKSGNATCYLCVDGSLQELHWFKQSYGSWFLGDYVCEDGRLYTATPVDPVFVL 140
Query: 314 LPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYR 493
LP+ ++ARMKK DDPGKFR +++I+++ GYP Y+ L + + + +C+VKDV ++R
Sbjct: 141 LPIFEEARMKKNDDPGKFRQVDEIIYVVGYPGYQHLSSIAENCMQVVCDVKDVGMTKFFR 200
Query: 494 LDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXX 673
L+++K++ WLC KV QL +TL TL+++YA R++ + ++DA+ +GEYLKE+PW
Sbjct: 201 LNDEKVLKWLCLKVIQLKKTLLTLDKNYAARDKKEILTDAVSIIGEYLKEEPWLKLLCSK 260
Query: 674 XXXXXETIKKPRMKE--PTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVD 847
+ K E +PM+ +F+S + G+ + + K T+ RP++K
Sbjct: 261 LSIDLQEDTKASNSEMHSSPMDNSFESF--NHEQGNSEGQEKATKSK-----RPTKKIKA 313
Query: 848 EKGLQKITSMFKKS 889
E I MF ++
Sbjct: 314 ETNSLNIKDMFSRA 327
>ref|XP_006413878.1| hypothetical protein EUTSA_v10025951mg [Eutrema salsugineum]
gi|557115048|gb|ESQ55331.1| hypothetical protein
EUTSA_v10025951mg [Eutrema salsugineum]
Length = 277
Score = 217 bits (553), Expect = 5e-54
Identities = 109/260 (41%), Positives = 155/260 (59%)
Frame = +2
Query: 110 GVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIAT 289
G N G L LCHPKS T Y+ N LQE+ WFKQ Y SWFLG+ + +DGSLY+AT
Sbjct: 22 GCGGNEPGELLTLCHPKSENGTCYLFNNGMLQEIQWFKQSYGSWFLGDYISQDGSLYMAT 81
Query: 290 PVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 469
PVDP+FI+LP+ DKARMKKG+DPGKFR L++IL++EGY Y+ L L + +C+ ++
Sbjct: 82 PVDPVFILLPIFDKARMKKGEDPGKFRQLDEILYVEGYSGYQHLLALAEKCMEIVCQTQE 141
Query: 470 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 649
V SM +YRLD K++AWL KV L +TLP L+++YA ++E + DA+ +GEYLK +P
Sbjct: 142 VGSMKFYRLDNSKVLAWLSFKVCCLKKTLPELDKNYAAQDEQQTLVDAVSIVGEYLKTEP 201
Query: 650 WXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRP 829
W +PT +S L D ++ S +K + G+P
Sbjct: 202 WLKLLYDHLGL--------EFVDPTMKETNVESLLTVD-ENNMASSNSFQEKANKKPGKP 252
Query: 830 SQKKVDEKGLQKITSMFKKS 889
+++ E G + I MF ++
Sbjct: 253 TKQAKLETGSKNIRDMFSRA 272
>ref|XP_002446662.1| hypothetical protein SORBIDRAFT_06g020030 [Sorghum bicolor]
gi|241937845|gb|EES10990.1| hypothetical protein
SORBIDRAFT_06g020030 [Sorghum bicolor]
Length = 302
Score = 216 bits (549), Expect = 2e-53
Identities = 114/273 (41%), Positives = 162/273 (59%), Gaps = 1/273 (0%)
Frame = +2
Query: 71 RVLIVHSLESEAVGVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLG 250
RVLI H S+A + G L L HP+SG T Y+ I+ LQE++WFK++Y +WFLG
Sbjct: 32 RVLISHR-PSDA-----SSQGTVLSLQHPRSGDETGYLFIDGQLQEINWFKERYGAWFLG 85
Query: 251 NDVCEDGSLYIATPVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPL 430
+ VCEDG LY TPVDPIFI LP + ARM G DPGKFR L++IL++EGYP Y+ L +
Sbjct: 86 DYVCEDGGLYYCTPVDPIFIFLPTFEAARMSNGKDPGKFRQLDEILYVEGYPGYQQLMNV 145
Query: 431 MHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSD 610
+ +CEVK+VS+M ++RLD K+++WLCCKV L E P L ++Y + E+ ++ +
Sbjct: 146 ASHHMELVCEVKEVSNMKFFRLDNSKVLSWLCCKVYNLKEIFPKLGKNYGAQTENGSLKE 205
Query: 611 AIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKG 790
A+ + EYLK+DPW I + T + DS +L S+
Sbjct: 206 AVQMIREYLKDDPWLTLLCKKLQLDINEI----TVDATTTTGEASFYADSCPAPALPSES 261
Query: 791 KT-TQKNSASRGRPSQKKVDEKGLQKITSMFKK 886
KT T +S+GRP++K E G + I MF++
Sbjct: 262 KTATGGAKSSKGRPAKKPKTEVGSKNIKDMFRR 294
>ref|XP_004975957.1| PREDICTED: ribonuclease H2 subunit B-like [Setaria italica]
Length = 283
Score = 215 bits (547), Expect = 3e-53
Identities = 103/253 (40%), Positives = 155/253 (61%), Gaps = 1/253 (0%)
Frame = +2
Query: 131 GRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIATPVDPIFI 310
G L L HP+SG T Y+ I+ LQE++WFK++Y +WFLG+ VCEDG LY TPVDPIFI
Sbjct: 27 GNVLSLRHPRSGDETGYLFIDGQLQEINWFKERYGAWFLGDYVCEDGGLYYCTPVDPIFI 86
Query: 311 ILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYY 490
LP + ARM G DPGKFR L++IL++EGYP Y+ L ++ + +CEVK+V++M ++
Sbjct: 87 FLPTFEAARMSNGKDPGKFRQLDEILYVEGYPGYQQLMSVVGHHMELVCEVKEVANMKFF 146
Query: 491 RLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXX 670
RLD+ K+++WLCCKV L E P L ++YA + E + + +A+ + EYLK++PW
Sbjct: 147 RLDDSKVLSWLCCKVYNLKEVFPKLGKNYAAQEEKEQLKEAVQMIREYLKDEPWLTLLCK 206
Query: 671 XXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNS-ASRGRPSQKKVD 847
I +K+ T + DS + S+ K ++ +S+GR ++K
Sbjct: 207 KLQLDMNEI----IKDTTTKTSEASFYADSSPAPACPSESKVANGSAKSSKGRAAKKPKT 262
Query: 848 EKGLQKITSMFKK 886
E G + I MF++
Sbjct: 263 EVGSKNIKDMFRR 275
>ref|NP_001136505.1| hypothetical protein [Zea mays] gi|194695968|gb|ACF82068.1| unknown
[Zea mays] gi|195619108|gb|ACG31384.1| hypothetical
protein [Zea mays] gi|414586755|tpg|DAA37326.1| TPA:
hypothetical protein ZEAMMB73_822759 [Zea mays]
Length = 302
Score = 215 bits (547), Expect = 3e-53
Identities = 112/273 (41%), Positives = 161/273 (58%), Gaps = 1/273 (0%)
Frame = +2
Query: 71 RVLIVHSLESEAVGVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLG 250
RVLI H S+A G G L L HP+SG Y+ I+ LQE++WFK++Y +WFLG
Sbjct: 32 RVLISHR-PSDASG-----QGIVLSLQHPRSGDEVGYLFIDGQLQEINWFKERYGAWFLG 85
Query: 251 NDVCEDGSLYIATPVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPL 430
+ VCEDG LY TPVDPIFI LP + ARM DPGKFR L++IL++EGYP Y+ L +
Sbjct: 86 DYVCEDGGLYYCTPVDPIFIFLPTFEAARMSNDKDPGKFRQLDEILYVEGYPGYQQLMNV 145
Query: 431 MHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSD 610
+ + +CEVK+VS+M ++RLD K+++WLCCKV L E P L ++YA + E + + +
Sbjct: 146 ANHHMELVCEVKEVSNMKFFRLDNSKVLSWLCCKVYDLKEVFPKLGKNYAAQTEKEKLKE 205
Query: 611 AIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKG 790
A+ + EYLK++PW I + T + DS +L S+
Sbjct: 206 AVQMIREYLKDEPWLALLCKKLQLDINAI----TVDATTKTAEASVYADSCPAPALPSES 261
Query: 791 KTTQKNS-ASRGRPSQKKVDEKGLQKITSMFKK 886
KT + +S+GRP++K E G + I MF++
Sbjct: 262 KTANGGAKSSKGRPAKKAKTEVGSKNIKDMFRR 294
>ref|XP_006284288.1| hypothetical protein CARUB_v10005457mg [Capsella rubella]
gi|482552993|gb|EOA17186.1| hypothetical protein
CARUB_v10005457mg [Capsella rubella]
Length = 277
Score = 214 bits (546), Expect = 3e-53
Identities = 111/260 (42%), Positives = 154/260 (59%)
Frame = +2
Query: 110 GVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIAT 289
G N G L+L HPKS + T Y+ N LQEL WFKQ Y SW LG+ + EDGSLY+AT
Sbjct: 22 GCGGNKPGELLKLRHPKSELGTCYLFSNGMLQELQWFKQSYGSWLLGDYISEDGSLYMAT 81
Query: 290 PVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 469
PVDP+FI+LP+ D+ARMKKG+D GKFR L++ILF+EGY Y+ L L + +C+ ++
Sbjct: 82 PVDPVFILLPIFDEARMKKGEDLGKFRQLDEILFVEGYTGYQQLLSLAEKCMEIVCQTQE 141
Query: 470 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 649
V SM +YRLD K++AWL CKV L +TLP L+++YA ++E + DA+ +GEYLK +
Sbjct: 142 VGSMKFYRLDNSKVLAWLSCKVYCLKKTLPELDKNYAAQDEKQTLVDAVSIVGEYLKTEH 201
Query: 650 WXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRP 829
W P MK+ NLA S + SL+ K K G+
Sbjct: 202 WLKLLYDHLGL---EFVDPTMKDTNMENLATASENNMASSNSLQEKAK------KKPGKQ 252
Query: 830 SQKKVDEKGLQKITSMFKKS 889
+++ E G + I MF ++
Sbjct: 253 TKQAKVETGSKNIRDMFSRA 272
>ref|XP_002869938.1| hypothetical protein ARALYDRAFT_329539 [Arabidopsis lyrata subsp.
lyrata] gi|297315774|gb|EFH46197.1| hypothetical protein
ARALYDRAFT_329539 [Arabidopsis lyrata subsp. lyrata]
Length = 277
Score = 214 bits (545), Expect = 5e-53
Identities = 108/260 (41%), Positives = 155/260 (59%)
Frame = +2
Query: 110 GVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIAT 289
G N G L L HPKS T ++ N+ +QEL WFKQ Y SWFLG+ + EDGSLY+AT
Sbjct: 22 GCGGNKPGELLTLRHPKSESGTCFLFNNEMIQELQWFKQSYGSWFLGDYISEDGSLYMAT 81
Query: 290 PVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 469
PVDP+FI+LP+ D+ARMKKG+D GKFR L++ILF+EGYP Y+ L L + +C+ ++
Sbjct: 82 PVDPVFILLPIFDEARMKKGEDLGKFRQLDEILFVEGYPGYQHLLSLAEKCMGIVCQTQE 141
Query: 470 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 649
V SM +YRLD K++AWL CKV L ++LP L+++YA ++E + DA+ +GEYLK +P
Sbjct: 142 VGSMKFYRLDNSKVLAWLSCKVYCLKKSLPELDKNYAAQDEKQTLIDAVSIVGEYLKTEP 201
Query: 650 WXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRP 829
W P MKE NL + ++ S +K + G+
Sbjct: 202 WLKLLYDHLGL---KFVDPTMKETNMENLPTANE------NNMASSTSLQEKANKKPGKQ 252
Query: 830 SQKKVDEKGLQKITSMFKKS 889
+++ E G + I MF ++
Sbjct: 253 TKQAKVETGSKNIRDMFSRA 272
>ref|XP_004501219.1| PREDICTED: ribonuclease H2 subunit B-like isoform X1 [Cicer
arietinum]
Length = 275
Score = 213 bits (542), Expect = 1e-52
Identities = 95/181 (52%), Positives = 130/181 (71%)
Frame = +2
Query: 110 GVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIAT 289
G N GR + L HPKSG +T Y+ +N LQE WFK Y SWFLG+ EDG LYI+T
Sbjct: 19 GTNGNTLGRMILLRHPKSGNATQYLFVNGMLQEFQWFKNMYGSWFLGDYTSEDGRLYIST 78
Query: 290 PVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 469
PVDP+FI+LP+ +ARMKKGDD GKFR L++ILF++GYP Y+ L L+ + +CEVK+
Sbjct: 79 PVDPVFIMLPIFQEARMKKGDDLGKFRQLDEILFIDGYPGYQQLMSLVESCMQVVCEVKE 138
Query: 470 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 649
V S+ ++RLD+ K++ WLC KV QL +TLP L+++YA ++E D + DA+ +GEYL E+
Sbjct: 139 VESLKFFRLDDAKVLHWLCYKVCQLKQTLPKLDKNYAVQSEKDMLVDAVSIIGEYLNEEH 198
Query: 650 W 652
W
Sbjct: 199 W 199
>ref|NP_001078412.2| ribonuclease H2 subunit B domain-containing protein [Arabidopsis
thaliana] gi|332658907|gb|AEE84307.1| ribonuclease H2
subunit B domain-containing protein [Arabidopsis
thaliana]
Length = 277
Score = 213 bits (541), Expect = 1e-52
Identities = 106/260 (40%), Positives = 154/260 (59%)
Frame = +2
Query: 110 GVVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIAT 289
G N G L L HPKS T ++ N+ LQEL WFKQ Y SWFLG+ + EDGSLY+AT
Sbjct: 22 GCGGNKPGELLTLRHPKSENGTCFLFNNEMLQELQWFKQSYGSWFLGDYISEDGSLYMAT 81
Query: 290 PVDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 469
PVDP+FI+LP+ D+ARMKKG++ GKFR L++ILF+EGYP Y+ L L + +C+ ++
Sbjct: 82 PVDPVFILLPIFDEARMKKGENSGKFRQLDEILFVEGYPGYQHLLSLAEKCMEIVCQTQE 141
Query: 470 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 649
V SM +YRLD K++AWL CK+ L +LP L+++YA ++E + D++ +GEYLK +P
Sbjct: 142 VGSMKFYRLDNSKVLAWLSCKIYCLKNSLPELDKNYAAQDEKQTLVDSVSIVGEYLKTEP 201
Query: 650 WXXXXXXXXXXXXETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRP 829
W P MKE NL + ++ S +K + G+
Sbjct: 202 WLKLLYDHLGL---KFVDPTMKETNMENLPTANE------NNMASSNSIQEKANKKPGKQ 252
Query: 830 SQKKVDEKGLQKITSMFKKS 889
+++ E G + I MF ++
Sbjct: 253 TKQAKVETGSKNIRDMFSRA 272
>gb|EXC32751.1| putative nucleoredoxin 3 [Morus notabilis]
Length = 645
Score = 212 bits (540), Expect = 2e-52
Identities = 96/180 (53%), Positives = 132/180 (73%)
Frame = +2
Query: 113 VVNNLSGRFLQLCHPKSGISTTYVLINDSLQELHWFKQQYNSWFLGNDVCEDGSLYIATP 292
V+ N GR L L HPK G + Y+L ND LQE+HWFKQ Y SWFLG+ V EDG LY ATP
Sbjct: 20 VLGNGVGRLLSLRHPKCGNAICYLLSNDVLQEIHWFKQPYTSWFLGDYVTEDGRLYTATP 79
Query: 293 VDPIFIILPLLDKARMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDV 472
VDP+FI+LP+ D+ARMKKGDD GKFR L++I+ ++ YP Y+ L + + + +CEVK++
Sbjct: 80 VDPVFILLPIFDEARMKKGDDLGKFRQLDEIMLIDDYPGYQHLLSVAENSMQLVCEVKEI 139
Query: 473 SSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPW 652
S ++RLD+ K++ WL KV +L +TL TL+++YA ++E D +SDA+ L EYLK+DPW
Sbjct: 140 GSSKFFRLDDSKVLGWLYHKVCRLKQTLLTLDKNYAAQDEKDTLSDAVSILSEYLKDDPW 199