BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00013522
         (410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191790.1| RNA helicase family protein [Arabidopsis thalia...    75   1e-11
ref|XP_006290650.1| hypothetical protein CARUB_v10016742mg [Caps...    75   1e-11
ref|XP_002878448.1| hypothetical protein ARALYDRAFT_349295 [Arab...    75   1e-11
gb|EPS66757.1| hypothetical protein M569_08016, partial [Genlise...    74   2e-11
gb|EOX95342.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...    74   2e-11
gb|EOX95341.1| RNA helicase family protein isoform 10 [Theobroma...    74   2e-11
gb|EOX95339.1| RNA helicase family protein isoform 8 [Theobroma ...    74   2e-11
gb|EOX95338.1| RNA helicase family protein isoform 7 [Theobroma ...    74   2e-11
gb|EOX95337.1| RNA helicase family protein isoform 6 [Theobroma ...    74   2e-11
gb|EOX95336.1| RNA helicase family protein isoform 5 [Theobroma ...    74   2e-11
gb|EOX95335.1| RNA helicase family protein isoform 4 [Theobroma ...    74   2e-11
gb|EOX95334.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...    74   2e-11
gb|EOX95333.1| RNA helicase family protein isoform 2 [Theobroma ...    74   2e-11
gb|EOX95332.1| RNA helicase family protein isoform 1 [Theobroma ...    74   2e-11
ref|XP_006845501.1| hypothetical protein AMTR_s00019p00154740 [A...    73   3e-11
ref|XP_006349171.1| PREDICTED: probable pre-mRNA-splicing factor...    73   5e-11
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor...    72   6e-11
gb|ACN28016.1| unknown [Zea mays] gi|414866511|tpg|DAA45068.1| T...    72   8e-11
ref|XP_006402386.1| hypothetical protein EUTSA_v10005810mg [Eutr...    72   1e-10
emb|CBI36976.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|NP_191790.1| RNA helicase family protein [Arabidopsis thaliana]
           gi|7340702|emb|CAB82945.1| ATP-dependent RNA
           helicase-like protein [Arabidopsis thaliana]
           gi|21539575|gb|AAM53340.1| ATP-dependent RNA
           helicase-like protein [Arabidopsis thaliana]
           gi|34098783|gb|AAQ56774.1| At3g62310 [Arabidopsis
           thaliana] gi|332646816|gb|AEE80337.1| RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 726

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLET----QTMILVGETGSGKTTQ 259
           NG+PYS RYYDILEKR+TLPVW     +EEFL+T    QT+ILVGETGSGKTTQ
Sbjct: 43  NGKPYSQRYYDILEKRRTLPVW---LQKEEFLKTLNNNQTLILVGETGSGKTTQ 93


>ref|XP_006290650.1| hypothetical protein CARUB_v10016742mg [Capsella rubella]
           gi|482559357|gb|EOA23548.1| hypothetical protein
           CARUB_v10016742mg [Capsella rubella]
          Length = 725

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLET----QTMILVGETGSGKTTQ 259
           NG+PYS RYYDILEKR+TLPVW     +EEFL+T    QT+ILVGETGSGKTTQ
Sbjct: 43  NGKPYSQRYYDILEKRRTLPVW---LQKEEFLKTLNSHQTLILVGETGSGKTTQ 93


>ref|XP_002878448.1| hypothetical protein ARALYDRAFT_349295 [Arabidopsis lyrata subsp.
           lyrata] gi|297324286|gb|EFH54707.1| hypothetical protein
           ARALYDRAFT_349295 [Arabidopsis lyrata subsp. lyrata]
          Length = 686

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLET----QTMILVGETGSGKTTQ 259
           NG+PYS RYYDILEKR+TLPVW     +EEFL+T    QT+ILVGETGSGKTTQ
Sbjct: 43  NGKPYSQRYYDILEKRRTLPVW---LQKEEFLKTLNSNQTLILVGETGSGKTTQ 93


>gb|EPS66757.1| hypothetical protein M569_08016, partial [Genlisea aurea]
          Length = 720

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFL----ETQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     ++EFL    E QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---HQKQEFLQALRENQTLILVGETGSGKTTQ 93


>gb|EOX95342.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 11
           [Theobroma cacao]
          Length = 557

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95341.1| RNA helicase family protein isoform 10 [Theobroma cacao]
          Length = 538

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95339.1| RNA helicase family protein isoform 8 [Theobroma cacao]
          Length = 544

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95338.1| RNA helicase family protein isoform 7 [Theobroma cacao]
          Length = 572

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95337.1| RNA helicase family protein isoform 6 [Theobroma cacao]
          Length = 545

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95336.1| RNA helicase family protein isoform 5 [Theobroma cacao]
          Length = 683

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95335.1| RNA helicase family protein isoform 4 [Theobroma cacao]
           gi|508703444|gb|EOX95340.1| RNA helicase family protein
           isoform 4 [Theobroma cacao]
          Length = 546

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95334.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 3
           [Theobroma cacao]
          Length = 746

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95333.1| RNA helicase family protein isoform 2 [Theobroma cacao]
          Length = 555

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>gb|EOX95332.1| RNA helicase family protein isoform 1 [Theobroma cacao]
          Length = 725

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 43  NGRPYSQRYYEILEKRKTLPVW---QQKEEFLQVLKANQTLILVGETGSGKTTQ 93


>ref|XP_006845501.1| hypothetical protein AMTR_s00019p00154740 [Amborella trichopoda]
           gi|548848073|gb|ERN07176.1| hypothetical protein
           AMTR_s00019p00154740 [Amborella trichopoda]
          Length = 714

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 38/54 (70%), Positives = 44/54 (81%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLET----QTMILVGETGSGKTTQ 259
           NGRPYS RY++ILEKRKTLPVW     ++EFL+T    QT+ILVGETGSGKTTQ
Sbjct: 37  NGRPYSQRYFEILEKRKTLPVW---QQKQEFLDTLEKHQTLILVGETGSGKTTQ 87


>ref|XP_006349171.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Solanum tuberosum]
          Length = 723

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/54 (70%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NG+PYS R+YDILEKRKTLPVW     +EEFL+     QT+ILVGETGSGKTTQ
Sbjct: 41  NGKPYSQRFYDILEKRKTLPVW---HQKEEFLQALKSNQTLILVGETGSGKTTQ 91


>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 722

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/54 (70%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFL----ETQTMILVGETGSGKTTQ 259
           NG+PYS RY+DILEKRKTLPVW     +EEFL    + QT+ILVGETGSGKTTQ
Sbjct: 40  NGKPYSQRYHDILEKRKTLPVW---HQKEEFLQALKDNQTLILVGETGSGKTTQ 90


>gb|ACN28016.1| unknown [Zea mays] gi|414866511|tpg|DAA45068.1| TPA: putative RNA
           helicase family protein [Zea mays]
          Length = 721

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFL----ETQTMILVGETGSGKTTQ 259
           NGRPY+ RY+DILEKR+TLPVW     +EEFL    + QT+ILVGETGSGKTTQ
Sbjct: 46  NGRPYTARYFDILEKRRTLPVW---QQKEEFLRSLRDNQTLILVGETGSGKTTQ 96


>ref|XP_006402386.1| hypothetical protein EUTSA_v10005810mg [Eutrema salsugineum]
           gi|557103485|gb|ESQ43839.1| hypothetical protein
           EUTSA_v10005810mg [Eutrema salsugineum]
          Length = 723

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLET----QTMILVGETGSGKTTQ 259
           NG+PYS +YY+ILEKR+TLPVW     +EEFL T    QT+ILVGETGSGKTTQ
Sbjct: 41  NGKPYSPKYYEILEKRRTLPVW---LQKEEFLRTLKDNQTLILVGETGSGKTTQ 91


>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 408 NGRPYSTRYYDILEKRKTLPVWXXXXXQEEFLE----TQTMILVGETGSGKTTQ 259
           NGRPYS RYY+ILEKR+TLPVW     +EEFL+     Q++ILVGETGSGKTTQ
Sbjct: 46  NGRPYSQRYYEILEKRRTLPVW---HQKEEFLQVLKANQSLILVGETGSGKTTQ 96