BLASTX nr result
ID: Ephedra26_contig00013446
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00013446 (1117 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAX19931.1| viral replicase [Nandina mosaic virus] 578 e-162 dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 541 e-151 gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a... 538 e-150 dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 537 e-150 dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 536 e-150 dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 536 e-150 dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 536 e-150 dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 536 e-150 dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 534 e-149 ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 471 e-130 ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 402 e-109 ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2... 269 2e-69 ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 268 4e-69 ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 256 2e-65 gb|ACS28228.1| replicase [Alternanthera mosaic virus] 251 5e-64 gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai... 251 5e-64 gb|ACS28233.1| replicase [Alternanthera mosaic virus] 250 8e-64 ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082... 249 1e-63 ref|NP_077079.1| replicase [Clover yellow mosaic virus] 246 1e-62 ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548... 244 3e-62 >gb|AAX19931.1| viral replicase [Nandina mosaic virus] Length = 1368 Score = 578 bits (1489), Expect = e-162 Identities = 280/330 (84%), Positives = 297/330 (90%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLT+GHL Sbjct: 172 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTIGHLQ 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 APNQPT+TAQRLETKGANHLFIFQRGNYLTPERRTFTTT+ YVTVPDIFLPEKYNCRTPI Sbjct: 232 APNQPTVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTDPYVTVPDIFLPEKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEF ASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFAASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFEDVLSGNL+QRLLRPLR+D+QR+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTR Sbjct: 352 TCFEDVLSGNLLQRLLRPLRADMQRILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTR 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRGPPGF +PFT+P PVNPDDA+T +FREF + + LE S E+ +HTSL Sbjct: 412 LRGPPGFLSPFTRPQPVNPDDAETTESFREFIQPLNPSPTATVTEMLENSTESDVTHTSL 471 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 KV LS EQL ALHELGN+R GGP+LPK Sbjct: 472 KVVPQSLSPEQLSALHELGNSRCGGPMLPK 501 >dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus] Length = 1380 Score = 541 bits (1394), Expect = e-151 Identities = 267/330 (80%), Positives = 283/330 (85%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLT Sbjct: 172 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLT 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 P Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD+FLP KYNCRTPI Sbjct: 232 TPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDVFLPAKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFED+LSGNL+QR+LRPL+S I ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT Sbjct: 352 TCFEDILSGNLLQRMLRPLKSGITQLLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTH 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRG PGF +PF +P PVNPDDA+T ++F+ F +LE AE H SL Sbjct: 412 LRGAPGFDSPFARPQPVNPDDAETTQSFQAFCQATITAEA-----ALEQQAETPDEHQSL 466 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 + L QL ALHELGNTR GGPLLPK Sbjct: 467 SLKCPTLPEHQLWALHELGNTRCGGPLLPK 496 >gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic virus] Length = 669 Score = 538 bits (1386), Expect = e-150 Identities = 265/330 (80%), Positives = 284/330 (86%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLT Sbjct: 172 LYATLVLPPEALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLT 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 AP T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPI Sbjct: 232 APGLLTVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFED+LSGNL+QR+LRPL S ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT Sbjct: 352 TCFEDILSGNLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTL 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRGPPGF +PFT+P PVNPDDA+T +F+ F + +LE AE H SL Sbjct: 412 LRGPPGFDSPFTRPQPVNPDDAETTHSFQAF-----CQAAAAVETTLEQQAETPDEHQSL 466 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 ++ LS QL ALH+LGN R GGPLLP+ Sbjct: 467 RLDCPTLSEHQLWALHKLGNARCGGPLLPQ 496 >dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus] Length = 1380 Score = 537 bits (1383), Expect = e-150 Identities = 264/330 (80%), Positives = 282/330 (85%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT Sbjct: 172 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLT 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 P Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPI Sbjct: 232 TPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT Sbjct: 352 TCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTH 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRG PGF +PF +P PVNPDDA+T ++F+ F + +L +E H SL Sbjct: 412 LRGAPGFDSPFARPQPVNPDDAETTQSFQAF-----CQATATVEXTLAQQSETPDEHQSL 466 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 + + L QL ALHELGN R GGPLLPK Sbjct: 467 SLKCSTLPEHQLWALHELGNARCGGPLLPK 496 >dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus] Length = 1380 Score = 536 bits (1382), Expect = e-150 Identities = 264/330 (80%), Positives = 282/330 (85%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT Sbjct: 172 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLT 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 P Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPI Sbjct: 232 TPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT Sbjct: 352 TCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTH 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRG PGF +PF +P PVNPDDA+T ++F+ F + +L +E H SL Sbjct: 412 LRGAPGFDSPFARPQPVNPDDAETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 + + L QL ALHELGN R GGPLLPK Sbjct: 467 SLKCSTLPEHQLWALHELGNARCGGPLLPK 496 >dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus] Length = 1380 Score = 536 bits (1380), Expect = e-150 Identities = 264/330 (80%), Positives = 281/330 (85%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT Sbjct: 172 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLT 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 P Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPI Sbjct: 232 TPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT Sbjct: 352 TCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTH 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRG PGF +PF +P PVNPDDA+T ++F+ F + +L +E H SL Sbjct: 412 LRGAPGFDSPFARPQPVNPDDAETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 + L QL ALHELGN R GGPLLPK Sbjct: 467 SLKCPTLPEHQLWALHELGNARCGGPLLPK 496 >dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus] Length = 1380 Score = 536 bits (1380), Expect = e-150 Identities = 264/330 (80%), Positives = 281/330 (85%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT Sbjct: 172 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLT 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 P Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPI Sbjct: 232 TPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT Sbjct: 352 TCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTH 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRG PGF +PF +P PVNPDDA+T ++F+ F + +L +E H SL Sbjct: 412 LRGAPGFDSPFARPQPVNPDDAETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 + L QL ALHELGN R GGPLLPK Sbjct: 467 SLKCPTLPEHQLWALHELGNARCGGPLLPK 496 >dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus] Length = 1380 Score = 536 bits (1380), Expect = e-150 Identities = 264/330 (80%), Positives = 281/330 (85%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT Sbjct: 172 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLT 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 P Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPI Sbjct: 232 TPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT Sbjct: 352 TCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTH 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRG PGF +PF +P PVNPDDA+T ++F+ F + +L +E H SL Sbjct: 412 LRGAPGFDSPFARPQPVNPDDAETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 + L QL ALHELGN R GGPLLPK Sbjct: 467 SLKCPTLPEHQLWALHELGNARCGGPLLPK 496 >dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus] Length = 1380 Score = 534 bits (1376), Expect = e-149 Identities = 263/330 (79%), Positives = 281/330 (85%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT Sbjct: 172 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLT 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 P Q T+TAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPI Sbjct: 232 TPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPI 291 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH Sbjct: 292 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 351 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFED+LSGNL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT Sbjct: 352 TCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTH 411 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 LRG PGF +PF +P PVNPDDA+T ++F+ F + +L +E H SL Sbjct: 412 LRGAPGFDSPFARPQPVNPDDAETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPK 992 + + L QL ALHELGN R G PLLPK Sbjct: 467 SLKCSTLPEHQLWALHELGNARCGAPLLPK 496 >ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein; AltName: Full=ORF1 protein; Includes: RecName: Full=RNA-directed RNA polymerase; Includes: RecName: Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus] Length = 1385 Score = 471 bits (1212), Expect = e-130 Identities = 244/367 (66%), Positives = 269/367 (73%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYATLVLPPE RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT Sbjct: 172 LYATLVLPPEPSTS-RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 230 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 AP PT+TAQRLETKGANHLFIFQRGNY+TPERRTF T + YVTVP IFLPE YNCRTPI Sbjct: 231 APGCPTVTAQRLETKGANHLFIFQRGNYITPERRTFATNDQYVTVPHIFLPENYNCRTPI 290 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 SKT MMQMFFYIKS KEA+ + +QLISTKELQHYQPSEITLLVNYFEFTA+LDSH Sbjct: 291 SKTTMMQMFFYIKSGKEAQREGHLGQVQQLISTKELQHYQPSEITLLVNYFEFTATLDSH 350 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TCFEDV L + I R+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T Sbjct: 351 TCFEDV-PPKLAPKTTPAPPLGISRILQFFRGRPSFVKLIKALDWQPITLEFPVRDVRTT 409 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 +RGPPGF NPFT+P PVNP+DAD F++F + LE SAE+ HT L Sbjct: 410 VRGPPGFKNPFTQPQPVNPEDADISSRFQDFSRATNSTPKPTVEAVLEASAESPDHHTQL 469 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLPKITPDEQDSEXXXXXXXXXXXTQASASLNQG 1082 KV + LS QL A+H LG++R GGPLLP++T E +QAS + + Sbjct: 470 KVLCSALSEGQLEAIHALGHSRCGGPLLPELTAKSTPVEQCPDLPPCPTKSQASPASSNP 529 Query: 1083 DHTDQAP 1103 D P Sbjct: 530 SGPDAQP 536 >ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase [Tulip virus X] Length = 1361 Score = 402 bits (1032), Expect = e-109 Identities = 205/329 (62%), Positives = 241/329 (73%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYAT+VLPPEALYRLRSLYP++YTLTYS+DGFMYIPGGHAGASY+HKYDQL+WLT G+L Sbjct: 172 LYATMVLPPEALYRLRSLYPEVYTLTYSDDGFMYIPGGHAGASYYHKYDQLQWLTAGYLI 231 Query: 183 APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPI 362 + + T+TAQRLETKGANHLFIFQRG YLTPERRTFTT YVTVP+IFLP N RTPI Sbjct: 232 SEST-TVTAQRLETKGANHLFIFQRGRYLTPERRTFTTATSYVTVPEIFLPSSANARTPI 290 Query: 363 SKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSH 542 +KT+ MQ+FFYIKSVKE +ERD+WAKFRQLISTKELQH+QP E TLLVNYF+F A+LDS Sbjct: 291 TKTLAMQIFFYIKSVKECRERDLWAKFRQLISTKELQHFQPDEATLLVNYFDFVANLDSA 350 Query: 543 TCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTR 722 TC ED+LSG+L+ RLLRP R + Q +++FF+G P KLIKAL WQP+ LEF V TV Sbjct: 351 TCHEDILSGSLLTRLLRPARVNWQALVRFFKGSPDHTKLIKALQWQPVLLEFKVSTVLVH 410 Query: 723 LRGPPGFHNPFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSL 902 R PPGF +P +P PVN DA T A ++ SL Sbjct: 411 KRTPPGFRHPLCRPLPVNEVDALTTAA---------------------------CANQSL 443 Query: 903 KVGHADLSTEQLRALHELGNTRLGGPLLP 989 + +LS +QL ALH LG+ R G LP Sbjct: 444 PLD--NLSEDQLEALHVLGSLRTDGESLP 470 >ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV RecName: Full=RNA replication protein; AltName: Full=176 kDa protein; AltName: Full=ORF1 protein; Includes: RecName: Full=RNA-directed RNA polymerase; Includes: RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed protein product [Papaya mosaic virus] gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic virus] Length = 1547 Score = 269 bits (687), Expect = 2e-69 Identities = 133/246 (54%), Positives = 174/246 (70%), Gaps = 6/246 (2%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYAT+VLPPEAL+RL SL+P IY L + ++ F+Y PGGHAGA+Y HKY+QLEW+ VG Sbjct: 174 LYATMVLPPEALHRLHSLHPGIYELEFHQEHFIYKPGGHAGAAYIHKYEQLEWIKVGRFK 233 Query: 183 APNQP----TITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNC 350 ++ +T+Q LETKGANHLFIFQRG +LTPE R F+T YVT+P IFLP+++N Sbjct: 234 WADEKGLTHMVTSQILETKGANHLFIFQRGRFLTPELRCFSTETKYVTMPPIFLPKQFNA 293 Query: 351 RTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTAS 530 R PI KT Q+F Y+KSVK ERDIWAK RQL+ T ELQ Y P E+TLLVNYF A Sbjct: 294 RLPIKKTTAQQLFLYVKSVKNVTERDIWAKMRQLLKTSELQDYNPREVTLLVNYFLLIAR 353 Query: 531 LDSHTCFEDVLSGNLIQRLLRPLRS--DIQRVLQFFRGRPSFVKLIKALDWQPITLEFPV 704 L S TCF++VLSG + ++L +P + +IQ+ F G F +L++AL+W +TL +P Sbjct: 354 LRSETCFDNVLSGGMFKKLFKPFIAWWEIQKHKIF--GNEEFEQLMEALEWVDVTLTYPT 411 Query: 705 RTVNTR 722 +T + R Sbjct: 412 KTFDNR 417 >ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus] gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent RNA polymerase [Cassava common mosaic virus] gi|1587823|prf||2207297A ORF 1 Length = 1449 Score = 268 bits (684), Expect = 4e-69 Identities = 131/248 (52%), Positives = 168/248 (67%), Gaps = 12/248 (4%) Frame = +3 Query: 6 YATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT- 182 YAT+VLPPEAL+++ SLYPQIYTL Y E GF+Y PGGHAGASY+H+Y QL WL VG + Sbjct: 173 YATMVLPPEALHKMNSLYPQIYTLQYKEKGFIYTPGGHAGASYYHEYSQLGWLDVGLIEY 232 Query: 183 -APNQP----------TITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIF 329 N P +TAQR+ETKGANHLF+FQRG TP+ R+ T Y+TVP +F Sbjct: 233 FEENAPDGSEYLGTKWAVTAQRIETKGANHLFVFQRGRLQTPQMRSIATNTQYITVPAVF 292 Query: 330 LPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVN 509 LP+K+N R P+ KTI QMF YIKSVK+ ERDI++K RQLI T ELQ Y P E+ LL N Sbjct: 293 LPKKFNSRQPLKKTIAQQMFLYIKSVKQVTERDIYSKLRQLIKTSELQEYSPDELVLLAN 352 Query: 510 YFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPIT 689 YF + L S E+VL+G+L ++L RP++S + + G+P F +L++AL W + Sbjct: 353 YFMLISELSSKASAEEVLAGSLFKKLFRPIKSKVTAFIHKLFGQPEFAQLLEALLWTNVD 412 Query: 690 LEFPVRTV 713 L PVR V Sbjct: 413 LILPVRYV 420 >ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase [Allium virus X] Length = 1701 Score = 256 bits (653), Expect = 2e-65 Identities = 128/239 (53%), Positives = 164/239 (68%), Gaps = 1/239 (0%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTY-SEDGFMYIPGGHAGASYFHKYDQLEWLTVGHL 179 L AT+VLP EA YR+ SL+P +YTL+Y E F+Y PGGH GA Y H + QL+WL VG + Sbjct: 170 LVATMVLPAEAKYRMASLHPNVYTLSYFGEHNFIYAPGGHHGAEYVHDFKQLDWLRVGRV 229 Query: 180 TAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTP 359 NQ ITAQR+E+K ANHLF+FQRGN TP R F T + YVT+P IFLP+K+N R P Sbjct: 230 RYKNQ-IITAQRIESKAANHLFVFQRGNLNTPPLRGFGTCKKYVTLPRIFLPKKFNTRVP 288 Query: 360 ISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDS 539 I KT++MQ+F Y+K V + ERDI+AK RQLI T +LQ + SE+ +VNYF F A DS Sbjct: 289 IEKTLVMQIFTYVKGVAKVTERDIYAKVRQLIKTDQLQGFDASELVHIVNYFCFIAKQDS 348 Query: 540 HTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVN 716 TCF D+LSG+L ++L +PL + + F G P F KL+KAL WQ IT+ V +N Sbjct: 349 MTCFSDILSGSLFKKLFQPLAAFLAECKHFIFGEPDFKKLLKALQWQDITMVVTVADIN 407 >gb|ACS28228.1| replicase [Alternanthera mosaic virus] Length = 1541 Score = 251 bits (640), Expect = 5e-64 Identities = 121/240 (50%), Positives = 165/240 (68%), Gaps = 4/240 (1%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYAT+VLPPEA++R+ S++P IY L + E F+Y PGGHAGASY H+Y QL+WL VG Sbjct: 174 LYATMVLPPEAMHRMHSIHPSIYELEFHEKNFIYKPGGHAGASYCHEYSQLQWLKVGKFE 233 Query: 183 APNQPT----ITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNC 350 ++ +T+Q LETKGANHLF+FQRGN+ TP RTF +VT+P IFLP+KYN Sbjct: 234 WCDKKYQKHYVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFVTLPPIFLPKKYNA 293 Query: 351 RTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTAS 530 R PI KT+ Q+F YIKSVK ERDIWAK RQ+I T ELQ Y E+ L+VNY+ + Sbjct: 294 RYPIKKTVAQQLFLYIKSVKTVTERDIWAKVRQIIKTAELQSYSAKELALIVNYYLLISK 353 Query: 531 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 710 LDS TCF++VL+G ++++L +P+ + G+ F +L++AL+W ++L + V T Sbjct: 354 LDSVTCFDNVLTGGVLKKLFKPIVAWWSTFKGKIFGKEEFEQLMEALEWVDVSLSYKVET 413 >gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus] Length = 1541 Score = 251 bits (640), Expect = 5e-64 Identities = 121/240 (50%), Positives = 165/240 (68%), Gaps = 4/240 (1%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYAT+VLPPEA++R+ S++P IY L + E F+Y PGGHAGASY H+Y QL+WL VG Sbjct: 174 LYATMVLPPEAMHRMHSIHPSIYELEFHEKNFIYKPGGHAGASYCHEYSQLQWLKVGKFE 233 Query: 183 APNQPT----ITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNC 350 ++ +T+Q LETKGANHLF+FQRGN+ TP RTF +VT+P IFLP+KYN Sbjct: 234 WCDKKYQKHHVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFVTLPPIFLPKKYNA 293 Query: 351 RTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTAS 530 R PI KT+ Q+F YIKSVK ERDIWAK RQ+I T ELQ Y E+ L+VNY+ + Sbjct: 294 RYPIKKTVAQQLFLYIKSVKTVTERDIWAKVRQIIKTAELQSYSAKELALIVNYYLLISK 353 Query: 531 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 710 LDS TCF++VL+G ++++L +P+ + G+ F +L++AL+W ++L + V T Sbjct: 354 LDSVTCFDNVLTGGVLKKLFKPIVAWWSTFKGKIFGKEEFEQLMEALEWVDVSLSYKVET 413 >gb|ACS28233.1| replicase [Alternanthera mosaic virus] Length = 1541 Score = 250 bits (638), Expect = 8e-64 Identities = 121/240 (50%), Positives = 163/240 (67%), Gaps = 4/240 (1%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYAT+VLPPEA++R+ S++P IY L + E F+Y PGGHAGASY H+Y QL+WL VG Sbjct: 174 LYATMVLPPEAMHRMHSIHPSIYELEFHERNFIYKPGGHAGASYCHEYSQLQWLKVGKFE 233 Query: 183 ----APNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNC 350 + +T+Q LETKGANHLF+FQRGN+ TP RTF +VT+P IFLP+KYN Sbjct: 234 WCDKRYQKHYVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFVTLPPIFLPKKYNA 293 Query: 351 RTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTAS 530 R PI KT+ Q+F YIKSVK ERDIWAK RQ+I T ELQ Y E+ L+VNY+ + Sbjct: 294 RYPIKKTVAQQLFLYIKSVKTVTERDIWAKVRQIIKTAELQSYSAKELALIVNYYLLISK 353 Query: 531 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 710 LDS TCF++VL+G +++L +P+ + G+ F +L++AL+W ++L + V T Sbjct: 354 LDSVTCFDNVLTGGALKKLFKPIVAWWSTFKGALFGKEEFEQLMEALEWVDVSLSYKVET 413 >ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1| replicase [Alternanthera mosaic virus] Length = 1541 Score = 249 bits (636), Expect = 1e-63 Identities = 121/240 (50%), Positives = 164/240 (68%), Gaps = 4/240 (1%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLT 182 LYAT+VLPPEA++R+ S++P IY L + E F+Y PGGHAGASY H+Y QL+WL VG Sbjct: 174 LYATMVLPPEAMHRMHSIHPSIYELEFHERNFIYKPGGHAGASYCHEYSQLQWLKVGKFE 233 Query: 183 APNQPT----ITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNC 350 ++ +T+Q LETKGANHLF+FQRGN+ TP RTF +VT+P IFLP+KYN Sbjct: 234 WCDKKYQKHYVTSQILETKGANHLFVFQRGNFATPTYRTFGVETKFVTLPPIFLPKKYNA 293 Query: 351 RTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTAS 530 R PI KT+ Q+F YIKSVK ERDIWAK RQ+I T ELQ Y E+ L+VNY+ + Sbjct: 294 RYPIKKTVAQQLFLYIKSVKTVTERDIWAKVRQIIKTAELQSYSAKELALIVNYYLLISK 353 Query: 531 LDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 710 LDS TCF++VL+G +++L +P+ + G+ F +L++AL+W ++L + V T Sbjct: 354 LDSVTCFDNVLTGGALKKLFKPIVAWWSTFKGKIFGKEEFEQLMEALEWVDVSLSYRVET 413 >ref|NP_077079.1| replicase [Clover yellow mosaic virus] Length = 1670 Score = 246 bits (628), Expect = 1e-62 Identities = 127/262 (48%), Positives = 169/262 (64%), Gaps = 10/262 (3%) Frame = +3 Query: 9 ATLVLPPEALYRLRSLYPQIYTLTYSEDG-------FMYIPGGHAGASYFHKYDQLEWLT 167 AT+VLP EALY L SLYP +Y+L+Y + F Y PGGH GA Y H+ Q++WL Sbjct: 174 ATMVLPTEALYGLTSLYPNVYSLSYHKPSKFRRKALFSYAPGGHKGAEYVHELKQIDWLR 233 Query: 168 VGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYN 347 GH+ + ITAQ+LETK ANHLFI++RG Y TPE R F T YVT+P IFLP ++N Sbjct: 234 FGHII-DGKVCITAQKLETKAANHLFIYKRGKYFTPEIRNFNTQTKYVTLPKIFLPAQFN 292 Query: 348 CRTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTA 527 R PI KT++MQ+F Y+K+V AKERDIWAK RQLI T++LQ Y P+EI LVNYF F A Sbjct: 293 HRVPIKKTLVMQLFMYVKTVSAAKERDIWAKIRQLIKTEDLQEYSPTEIVHLVNYFLFIA 352 Query: 528 SLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLE---F 698 + T F+ +L G++I+++ RP+ + + Q G F +L++AL W I L Sbjct: 353 KTSAVTSFDSMLDGSIIKKIFRPVLAWFKSGYQRIFGLSEFNQLLEALSWDEIDLTLDVL 412 Query: 699 PVRTVNTRLRGPPGFHNPFTKP 764 PV+T + R G ++PFT P Sbjct: 413 PVKTHDWRRMGVADSNDPFTYP 434 >ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1| replicase [Tamus red mosaic virus] Length = 1501 Score = 244 bits (624), Expect = 3e-62 Identities = 126/269 (46%), Positives = 168/269 (62%), Gaps = 6/269 (2%) Frame = +3 Query: 3 LYATLVLPPEALYRLRSLYPQIYTLTYSE------DGFMYIPGGHAGASYFHKYDQLEWL 164 L AT+VLP EA + L S+YP IYTL Y F Y PGGH GA Y H+ QL+WL Sbjct: 172 LVATMVLPAEAKFNLASIYPNIYTLQYHRCKKGKVTHFSYAPGGHKGAEYVHELKQLDWL 231 Query: 165 TVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKY 344 +VG LT TITAQ++ETK ANHLFIFQRG+ +TP R F+T +VT+P IFLPEK+ Sbjct: 232 SVGRLT-DGVTTITAQKIETKAANHLFIFQRGSLMTPCLRNFSTETKFVTLPLIFLPEKF 290 Query: 345 NCRTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFT 524 N R PI KT++MQMF Y+K VK+ ERDIWAK+RQLI T++LQ + E+ L NYF F Sbjct: 291 NARQPIRKTLVMQMFLYVKGVKQVSERDIWAKWRQLIKTEDLQDFSAIELLHLTNYFVFV 350 Query: 525 ASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPV 704 S CF+DVL G + R +P+++ + V Q G FV+L++AL+W + L+ Sbjct: 351 GKQSSINCFDDVLKGGFLTRWFKPIKNWFEMVRQKIFGEAEFVRLVRALEWTEVDLKLDT 410 Query: 705 RTVNTRLRGPPGFHNPFTKPHPVNPDDAD 791 + + + R GF + PDD++ Sbjct: 411 KNYDFKRREGNGFLS--LSKVAAGPDDSE 437