BLASTX nr result
ID: Ephedra26_contig00013409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00013409
(695 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001760032.1| predicted protein [Physcomitrella patens] gi... 84 4e-14
ref|XP_002966000.1| hypothetical protein SELMODRAFT_407201 [Sela... 69 1e-09
emb|CBI36039.3| unnamed protein product [Vitis vinifera] 62 2e-07
ref|XP_006426855.1| hypothetical protein CICLE_v10026494mg [Citr... 60 5e-07
ref|XP_006485734.1| PREDICTED: DNA-directed RNA polymerase III s... 60 7e-07
ref|XP_006465707.1| PREDICTED: DNA-directed RNA polymerase III s... 60 7e-07
ref|XP_006440853.1| hypothetical protein CICLE_v10022257mg [Citr... 60 7e-07
gb|EOX90616.1| Uncharacterized protein TCM_000033 [Theobroma cacao] 60 7e-07
ref|XP_002515951.1| conserved hypothetical protein [Ricinus comm... 56 9e-06
ref|NP_001144128.1| uncharacterized protein LOC100276973 [Zea ma... 56 9e-06
>ref|XP_001760032.1| predicted protein [Physcomitrella patens]
gi|162688782|gb|EDQ75157.1| predicted protein
[Physcomitrella patens]
Length = 357
Score = 84.0 bits (206), Expect = 4e-14
Identities = 43/95 (45%), Positives = 59/95 (62%)
Frame = -3
Query: 687 PPQLFPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEIER 508
P LFP +++ LP P +++ D +V +R HL W SPY+IE K + G+ AEI+R
Sbjct: 36 PTPLFPKVER-LPDLPTVTKRDEMLVFRRHHLQKAWECSPYYIEKIKTKTE-GIVAEIDR 93
Query: 507 YSDKYKPRNNVNRPPLSSYLKLAQSYFPAELLTQG 403
YSD+Y+ NR PL+S LKL + FP ELL QG
Sbjct: 94 YSDRYRTNRRANRVPLNSVLKLTGASFPVELLGQG 128
>ref|XP_002966000.1| hypothetical protein SELMODRAFT_407201 [Selaginella moellendorffii]
gi|300166814|gb|EFJ33420.1| hypothetical protein
SELMODRAFT_407201 [Selaginella moellendorffii]
Length = 242
Score = 68.9 bits (167), Expect = 1e-09
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = -3
Query: 687 PPQLFPDLKKELPSFPEISE-IDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEIE 511
PP LFP ++ LP P+I++ + ++V +RR L + WN S Y+IE +K + +++E
Sbjct: 43 PPPLFPAVET-LPERPDITQGNNAFLVERRRTLHTFWNESAYYIEAVDKDTS-SVPSDVE 100
Query: 510 RYSDKYKPRNNVNRPPLSSYLKLAQSYFPAELLTQGSKRVREVKGSELW 364
R + KP R LS YL+L+ +FPAELL K+ RE +W
Sbjct: 101 RCLSRSKPGPQTKRKSLSLYLQLSSMFFPAELLGNQRKKRRENDEEGIW 149
>emb|CBI36039.3| unnamed protein product [Vitis vinifera]
Length = 260
Score = 62.0 bits (149), Expect = 2e-07
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = -3
Query: 690 DPPQLFPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEP--PNKKAKVGLAAE 517
+P LFPD+ ELP + E + +V + L + W +SPY++E P K + +
Sbjct: 76 EPFVLFPDI--ELPDVSSVPE-EKNLVIRNARLQNYWKSSPYYLEDIVPRKSQ----STD 128
Query: 516 IERYSDKYKPRNNVNRPPLSSYLKLAQSYFPAELLTQGSKRVREVKGSELWVSQADGSKY 337
IER+SD+ K R + R PL L+L + FP EL+ QG K K W ++D K
Sbjct: 129 IERFSDRVKLRTTLKRDPLEQILRLTSNNFPLELV-QGMKGATHNKRKVQWNPESDMQKL 187
Query: 336 D 334
+
Sbjct: 188 E 188
>ref|XP_006426855.1| hypothetical protein CICLE_v10026494mg [Citrus clementina]
gi|557528845|gb|ESR40095.1| hypothetical protein
CICLE_v10026494mg [Citrus clementina]
Length = 208
Score = 60.5 bits (145), Expect = 5e-07
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Frame = -3
Query: 690 DPPQLFPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEIE 511
+P +LFP++ ELP + I+ ++ LL+ W +SPYF+E K + +IE
Sbjct: 25 EPFELFPEI--ELPDHKNVP-IERNLILWNSRLLNYWKSSPYFLE--ENVEKNSQSVDIE 79
Query: 510 RYSDKYKPRNNVNRPPLSSYLKLAQSYFPAELL-----TQGSKRVR 388
RYSD KP+ + NR ++ +L+L S FPAEL+ + KRVR
Sbjct: 80 RYSDWNKPKVSSNRGSINQFLQLHSSNFPAELVKDSREQRNPKRVR 125
>ref|XP_006485734.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc31-like
[Citrus sinensis]
Length = 208
Score = 60.1 bits (144), Expect = 7e-07
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Frame = -3
Query: 690 DPPQLFPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEIE 511
+P +LFP++ ELP+ I I+ ++ LL+ W +SPYF+E +K + +IE
Sbjct: 25 EPFKLFPEI--ELPAHKNIP-IEKNLILWNSRLLNYWKSSPYFLEESVEKNSQSV--DIE 79
Query: 510 RYSDKYKPRNNVNRPPLSSYLKLAQSYFPAELL-----TQGSKRVR 388
RYSD KP+ + NR ++ +L+L + FPAEL+ + KRVR
Sbjct: 80 RYSDWNKPKVSSNRGSINQFLQLRSNNFPAELVKDSREQRNPKRVR 125
>ref|XP_006465707.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc31-like
isoform X1 [Citrus sinensis]
gi|568822579|ref|XP_006465708.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc31-like isoform X2 [Citrus
sinensis]
Length = 208
Score = 60.1 bits (144), Expect = 7e-07
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Frame = -3
Query: 690 DPPQLFPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEIE 511
+P +LFP++ ELP + I+ ++ LL+ W +SPYF+E K + +IE
Sbjct: 25 EPFELFPEI--ELPDHKNVL-IERNLILWNSRLLNYWKSSPYFLE--ENVEKNSQSVDIE 79
Query: 510 RYSDKYKPRNNVNRPPLSSYLKLAQSYFPAELL-----TQGSKRVR 388
RYSD KP+ + NR ++ +L+L S FPAEL+ + KRVR
Sbjct: 80 RYSDWNKPKVSSNRGSINQFLQLHSSNFPAELVKDSREQRNPKRVR 125
>ref|XP_006440853.1| hypothetical protein CICLE_v10022257mg [Citrus clementina]
gi|557543115|gb|ESR54093.1| hypothetical protein
CICLE_v10022257mg [Citrus clementina]
Length = 208
Score = 60.1 bits (144), Expect = 7e-07
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Frame = -3
Query: 690 DPPQLFPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEIE 511
+P +LFP++ ELP+ I I+ ++ LL+ W +SPYF+E K + +IE
Sbjct: 25 EPFKLFPEI--ELPAHKNIP-IEKNLILWNSRLLNYWKSSPYFLE--ENVEKNSQSVDIE 79
Query: 510 RYSDKYKPRNNVNRPPLSSYLKLAQSYFPAELL-----TQGSKRVR 388
RYSD KP+ + NR ++ +L+L + FPAEL+ + KRVR
Sbjct: 80 RYSDWNKPKVSSNRGSINQFLQLRSNNFPAELVKDSREQRNPKRVR 125
>gb|EOX90616.1| Uncharacterized protein TCM_000033 [Theobroma cacao]
Length = 418
Score = 60.1 bits (144), Expect = 7e-07
Identities = 37/105 (35%), Positives = 54/105 (51%)
Frame = -3
Query: 693 PDPPQLFPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEI 514
P+P LFPD+ ELP + E T ++ R L + W SPY++E +K + +I
Sbjct: 234 PEPVVLFPDV--ELPDVKGVPEEKTLVIWNSR-LQNYWKASPYYLE--ENVSKKSQSKDI 288
Query: 513 ERYSDKYKPRNNVNRPPLSSYLKLAQSYFPAELLTQGSKRVREVK 379
ERYSD KP++ R L+ L+L FP EL+ + R K
Sbjct: 289 ERYSDWEKPKSTSKRDSLNQILQLQSHNFPKELIGDSRRAQRSAK 333
>ref|XP_002515951.1| conserved hypothetical protein [Ricinus communis]
gi|223544856|gb|EEF46371.1| conserved hypothetical
protein [Ricinus communis]
Length = 283
Score = 56.2 bits (134), Expect = 9e-06
Identities = 36/114 (31%), Positives = 60/114 (52%)
Frame = -3
Query: 675 FPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEIERYSDK 496
FP++ ELP + E +VG + L++ W +SPY++E K + ++ER+SD
Sbjct: 104 FPEV--ELPDRKAVKEERVLVVGNAK-LVAFWKSSPYYLEETISKKSQSM--DVERFSDW 158
Query: 495 YKPRNNVNRPPLSSYLKLAQSYFPAELLTQGSKRVREVKGSELWVSQADGSKYD 334
K + ++ R L ++L+L S FP EL+ G+K R W +D K+D
Sbjct: 159 GKSKTSLKRDALGNFLQLRSSNFPKELIA-GAKWERPNPKKVRWDPNSDLQKWD 211
>ref|NP_001144128.1| uncharacterized protein LOC100276973 [Zea mays]
gi|195637266|gb|ACG38101.1| hypothetical protein [Zea
mays]
Length = 208
Score = 56.2 bits (134), Expect = 9e-06
Identities = 39/118 (33%), Positives = 59/118 (50%)
Frame = -3
Query: 687 PPQLFPDLKKELPSFPEISEIDTYMVGKRRHLLSLWNNSPYFIEPPNKKAKVGLAAEIER 508
P + FPD+ + S + ++ L W +S Y++E K K EIER
Sbjct: 29 PHEDFPDIALPEMKCAKASNEEKALIVSTLKLEEFWRSSCYYLEEDAPKKK-NEDKEIER 87
Query: 507 YSDKYKPRNNVNRPPLSSYLKLAQSYFPAELLTQGSKRVREVKGSELWVSQADGSKYD 334
+SD+ K + R L+SYLKLA S FPAEL+ QGS+R + W ++D ++
Sbjct: 88 FSDR-KRKTQSKREGLASYLKLAPSNFPAELV-QGSRRGQATNKKLRWDKESDEQAFE 143