BLASTX nr result

ID: Ephedra26_contig00013401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00013401
         (1067 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18034.1| unknown [Picea sitchensis]                             105   2e-20
ref|XP_004307017.1| PREDICTED: NAC domain-containing protein 78-...    57   1e-05

>gb|ABR18034.1| unknown [Picea sitchensis]
          Length = 660

 Score =  105 bits (263), Expect = 2e-20
 Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
 Frame = -3

Query: 1050 FTSGEDNYSSLMKPSAGNECVTAVQHIDAAGQQQKESNEFNSGTFSRVVNLLGSYPSLPA 871
            F   E + +  + PSA +E +   Q + A  Q  K   ++++G+ S+  +LL S  + PA
Sbjct: 465  FAFSEIDDARNLAPSADDEFMMTRQDVSAGMQSSKNHEDYDTGSSSKFASLLASIHARPA 524

Query: 870  SASEFPVRMKSFKKQASFGSIHIRAANTQITAVTVSCSCSK--DPK-SNEEKDSVCTCSS 700
            SA+E+P R K   +     S+ +  A   + AV+V+C+CS   +PK  +   D + TCS 
Sbjct: 525  SAAEYPFRSKYLSQLPKVDSVTVETAINHVAAVSVTCACSMVLEPKIEHSSGDLLSTCSC 584

Query: 699  GVSYEVRQ----------XXXXXXXXXXSLGKTGSTGTRNGYLFIFFLGAISAMVWILLL 550
            GV+  + Q                       +  S+G   G+LF+FFLGAIS  VW L++
Sbjct: 585  GVANGIVQGSFVSSWPASSSIGFKSADSVTPRKTSSGLHAGFLFVFFLGAISVFVWALVV 644

Query: 549  GITFKFGRYIYKLV 508
            G TF  G+YIYKLV
Sbjct: 645  GGTFILGKYIYKLV 658


>ref|XP_004307017.1| PREDICTED: NAC domain-containing protein 78-like [Fragaria vesca
            subsp. vesca]
          Length = 559

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
 Frame = -3

Query: 1017 MKP-SAGNECVTAVQHI-DAAGQQQKESNEFNS-GTF---SRVVNLLGSYPSLPASASEF 856
            M+P S G++ +     + DA+  +QK   +F S G F   ++  ++LGS P+ PA ASEF
Sbjct: 393  MEPLSTGSQHLVEAHDVNDASSSKQKPDMQFGSDGKFPFITKASHMLGSIPAPPAFASEF 452

Query: 855  PVR---MKSFKKQASFGSIH---IRAANTQITAVTVSCSCSKD-----------PKSNEE 727
            P +   ++   + AS  S+H   IR  +   +   V  S  KD           P+S+  
Sbjct: 453  PAKDAILRLNSEVASSSSVHAGMIRIRDITSSDNRVEWSIGKDGVVNLVFSVQLPQSDVN 512

Query: 726  KDSVCTCSSGVSYEVRQXXXXXXXXXXSLGKTGSTGTRNGYLFIFFLGAISAMVWILLLG 547
              ++      VS                 GKTGS   R   LF+FF        W+L + 
Sbjct: 513  SSNLVPMGGSVS-----------------GKTGSVVMRGWVLFMFF--------WVLFIS 547

Query: 546  ITFKFGRYIY 517
            I+FK G YIY
Sbjct: 548  ISFKMGSYIY 557


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