BLASTX nr result

ID: Ephedra26_contig00013077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00013077
         (493 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006846185.1| hypothetical protein AMTR_s00012p00210330 [A...    67   2e-09
ref|XP_001764367.1| predicted protein [Physcomitrella patens] gi...    59   5e-07

>ref|XP_006846185.1| hypothetical protein AMTR_s00012p00210330 [Amborella trichopoda]
            gi|548848955|gb|ERN07860.1| hypothetical protein
            AMTR_s00012p00210330 [Amborella trichopoda]
          Length = 2039

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    HLFYLVCLGQAIANAGNVTSMMLDISSGFHAFATEIQELLSGAILNSASLHNSDAXXXXX 182
            HLFY+VC+ QA+          +   +      T I + L  A++N     ++       
Sbjct: 1716 HLFYVVCMIQAVITCCKKRVFDISELNSGGRLVTSIYKKLGEALINEQHFGSNYFDGSCP 1775

Query: 183  XXXXXXXXXXXXXXXCALLFKVLISLTDSNLSGLLE------SSVILETDSKQHKVSSEL 344
                           CALL K+L S   +   G         S + ++      ++S EL
Sbjct: 1776 PVTMIRRYTLPYLRRCALLLKLLKSSMSAPFHGTSHVWERSSSHMSIDEMKSIDRISLEL 1835

Query: 345  RELKQLENLFHIPSLELLIENRRMQEIVRRWCQHFLSVRGSRTFNHV 485
             E+ +LEN+F I  LE ++E   +Q +  +WC+HF    G R++ HV
Sbjct: 1836 EEVLELENMFQISPLEDVLEGEEVQTLAMKWCEHFFKSSGVRSYGHV 1882


>ref|XP_001764367.1| predicted protein [Physcomitrella patens] gi|162684519|gb|EDQ70921.1|
            predicted protein [Physcomitrella patens]
          Length = 2015

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
 Frame = +3

Query: 3    HLFYLVCLGQAIANAGNVTSMMLDISSGFHAFATEIQELLSGAILNSASLHNSDAXXXXX 182
            HLFYLV + Q IA  G+  +   +++    +F   +Q   +G +L S++  +S +     
Sbjct: 1688 HLFYLVTIVQTIAQLGSFATSGTELTPSARSFIAAVQTGSNGTVLESSTGDSSISPTLES 1747

Query: 183  XXXXXXXXXXXXXXXCALLFKVLIS--------------LTDSNLSGLLESSVILETDSK 320
                           C LL  +L                L   ++      +   ++   
Sbjct: 1748 YLAYIRRCTLPFLRRCYLLQNLLSGAAQVLPVATAHQWELPQGHIHSTETETTSEDSKDA 1807

Query: 321  QHKVSSELRELKQLENLFHIPSLELLIENRRMQEIVRRWCQHFLSVRGSRTFNH 482
              +V  E+ EL QLE++F IPSL  + E    Q++V+ WC+H  +  G R   H
Sbjct: 1808 DKQVLLEMEELDQLESVFLIPSLVNIFEQETNQQLVQAWCKHVKTDAGPRGIQH 1861


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