BLASTX nr result

ID: Ephedra26_contig00012972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00012972
         (682 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              58   2e-06

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 44/165 (26%), Positives = 78/165 (47%)
 Frame = -3

Query: 680 LLIQVGKDLKFRRQEYYYSDTLKRLEEADFSTYRSKTLDEFLLCIFRLLEKDVQTAFLDI 501
           +L  V + L+F + +      L  LE+     +    ++ +L    +L E D +  FLDI
Sbjct: 501 MLKLVARALRFAKDKEEVDQVLDELEKLKGEDFGRDKIESYLFAYDKLPE-DCKDPFLDI 559

Query: 500 CVFFVGNRYWEWETACYTVGEKAMDILAERSMIRIGEYNQVIVHDVLKAMALKFAKEQRS 321
           C +F G   W+WE     +G + + +LA+R++I       + VHDV+  +  + ++  R 
Sbjct: 560 CSYFEG---WDWEIVANIMGGRELKMLADRALITKNTNGVISVHDVILTLGRRKSEGVRF 616

Query: 320 HFIITIDHGEIGSESVKLSDLLEEHVDATKIEGLFIKSLDEGKDI 186
            FI        GS+  K  D  +E  +  KI+G++     E KD+
Sbjct: 617 MFI-------SGSQFKKFLDKKKEE-EIQKIKGIW---FSENKDL 650


Top