BLASTX nr result
ID: Ephedra26_contig00012756
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00012756
(479 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002877981.1| skp1-interacting partner 5 [Arabidopsis lyra... 80 2e-13
gb|AAG40405.1|AF325053_1 T14E10.50 [Arabidopsis thaliana] gi|143... 80 3e-13
ref|NP_567000.2| SKP1/ASK-interacting protein 5 [Arabidopsis tha... 80 3e-13
ref|NP_566999.1| SKP1/ASK-interacting protein 5 [Arabidopsis tha... 80 3e-13
ref|XP_006403571.1| hypothetical protein EUTSA_v10010628mg [Eutr... 78 1e-12
ref|XP_004142419.1| PREDICTED: F-box protein SKIP5-like [Cucumis... 78 1e-12
tpg|DAA63988.1| TPA: hypothetical protein ZEAMMB73_319872 [Zea m... 78 1e-12
ref|XP_002461155.1| hypothetical protein SORBIDRAFT_02g041860 [S... 78 1e-12
tpg|DAA63987.1| TPA: hypothetical protein ZEAMMB73_319872 [Zea m... 78 1e-12
ref|XP_006292685.1| hypothetical protein CARUB_v10018930mg [Caps... 77 2e-12
gb|ADE75775.1| unknown [Picea sitchensis] 77 2e-12
gb|AAG21980.1| SKP1 interacting partner 5 [Arabidopsis thaliana] 77 2e-12
ref|XP_006494345.1| PREDICTED: F-box protein SKIP5-like isoform ... 77 2e-12
ref|XP_006494344.1| PREDICTED: F-box protein SKIP5-like isoform ... 77 2e-12
ref|XP_006494343.1| PREDICTED: F-box protein SKIP5-like isoform ... 77 2e-12
ref|XP_006420750.1| hypothetical protein CICLE_v10005678mg [Citr... 77 2e-12
ref|XP_006830359.1| hypothetical protein AMTR_s00116p00090490 [A... 77 2e-12
ref|XP_001765023.1| predicted protein [Physcomitrella patens] gi... 77 2e-12
ref|XP_006658920.1| PREDICTED: F-box protein SKIP5-like [Oryza b... 77 3e-12
ref|XP_006350998.1| PREDICTED: F-box protein SKIP5-like [Solanum... 76 4e-12
>ref|XP_002877981.1| skp1-interacting partner 5 [Arabidopsis lyrata subsp. lyrata]
gi|297323819|gb|EFH54240.1| skp1-interacting partner 5
[Arabidopsis lyrata subsp. lyrata]
Length = 274
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = +3
Query: 288 LMEDREKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWL 467
++E R KK + + +N+LDD CLMHIL+FLSP+PDRYN A VC RWRYLA RLWL
Sbjct: 18 IVESRMKKRMKPHSLTSINNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWL 77
Query: 468 NV 473
V
Sbjct: 78 RV 79
>gb|AAG40405.1|AF325053_1 T14E10.50 [Arabidopsis thaliana]
gi|14348814|gb|AAK61344.1|AF347971_1 SKP1-interacting
partner 5 [Arabidopsis thaliana]
Length = 156
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +3
Query: 288 LMEDREKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWL 467
++E + KK + + +N+LDD CLMHIL+FLSP+PDRYN A VC RWRYLA RLWL
Sbjct: 18 IVESKMKKRMKPYSLTSLNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWL 77
Query: 468 NV 473
V
Sbjct: 78 RV 79
>ref|NP_567000.2| SKP1/ASK-interacting protein 5 [Arabidopsis thaliana]
gi|332645716|gb|AEE79237.1| SKP1/ASK-interacting protein
5 [Arabidopsis thaliana]
Length = 118
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +3
Query: 288 LMEDREKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWL 467
++E + KK + + +N+LDD CLMHIL+FLSP+PDRYN A VC RWRYLA RLWL
Sbjct: 18 IVESKMKKRMKPYSLTSLNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWL 77
Query: 468 NV 473
V
Sbjct: 78 RV 79
>ref|NP_566999.1| SKP1/ASK-interacting protein 5 [Arabidopsis thaliana]
gi|75250089|sp|Q94FT2.1|SKIP5_ARATH RecName: Full=F-box
protein SKIP5; AltName: Full=SKP1-interacting partner 5
gi|14348816|gb|AAK61345.1|AF347972_1 SKP1-interacting
partner 5 [Arabidopsis thaliana]
gi|21537258|gb|AAM61599.1| SKP1 interacting partner
SKIP5 [Arabidopsis thaliana] gi|29028838|gb|AAO64798.1|
At3g54480 [Arabidopsis thaliana]
gi|110743130|dbj|BAE99457.1| SKP1-interacting partner 5
[Arabidopsis thaliana] gi|332645715|gb|AEE79236.1|
SKP1/ASK-interacting protein 5 [Arabidopsis thaliana]
Length = 274
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +3
Query: 288 LMEDREKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWL 467
++E + KK + + +N+LDD CLMHIL+FLSP+PDRYN A VC RWRYLA RLWL
Sbjct: 18 IVESKMKKRMKPYSLTSLNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWL 77
Query: 468 NV 473
V
Sbjct: 78 RV 79
>ref|XP_006403571.1| hypothetical protein EUTSA_v10010628mg [Eutrema salsugineum]
gi|557104690|gb|ESQ45024.1| hypothetical protein
EUTSA_v10010628mg [Eutrema salsugineum]
Length = 272
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = +3
Query: 288 LMEDREKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWL 467
+ E R K + + +N+LDD CLMHIL+FLSP+PDRYN A VC RWRYLA RLWL
Sbjct: 18 IAEPRMKMRMKPELLASLNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWL 77
Query: 468 NV 473
V
Sbjct: 78 RV 79
>ref|XP_004142419.1| PREDICTED: F-box protein SKIP5-like [Cucumis sativus]
Length = 272
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = +3
Query: 294 EDREKKIRRGMFGSR---MNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLW 464
E++++K +R S +NSLDD CLMHI +FLSP+PDRYN A VC RWRYLA RLW
Sbjct: 23 ENKQRKWKRKGTSSSSPSVNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRYLACHPRLW 82
Query: 465 LNVK 476
L V+
Sbjct: 83 LRVE 86
>tpg|DAA63988.1| TPA: hypothetical protein ZEAMMB73_319872 [Zea mays]
Length = 135
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +3
Query: 333 SRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNVK 476
S MNSLDD CLMHI +FLSP+PDRYN A VC RWR+LA RLWL V+
Sbjct: 18 SPMNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPRLWLRVE 65
>ref|XP_002461155.1| hypothetical protein SORBIDRAFT_02g041860 [Sorghum bicolor]
gi|241924532|gb|EER97676.1| hypothetical protein
SORBIDRAFT_02g041860 [Sorghum bicolor]
Length = 248
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +3
Query: 333 SRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNVK 476
S MNSLDD CLMHI +FLSP+PDRYN A VC RWR+LA RLWL V+
Sbjct: 18 SPMNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPRLWLRVE 65
>tpg|DAA63987.1| TPA: hypothetical protein ZEAMMB73_319872 [Zea mays]
Length = 254
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +3
Query: 333 SRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNVK 476
S MNSLDD CLMHI +FLSP+PDRYN A VC RWR+LA RLWL V+
Sbjct: 18 SPMNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPRLWLRVE 65
>ref|XP_006292685.1| hypothetical protein CARUB_v10018930mg [Capsella rubella]
gi|482561392|gb|EOA25583.1| hypothetical protein
CARUB_v10018930mg [Capsella rubella]
Length = 271
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3
Query: 339 MNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNV 473
+N+LDD CLMHIL+FLSP+PDRYN A VC RWRYLA RLWL V
Sbjct: 35 LNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWLRV 79
>gb|ADE75775.1| unknown [Picea sitchensis]
Length = 305
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = +3
Query: 291 MEDREKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLN 470
M + +K R S +N+LDD CLM IL+FLSPLPDRY+AA VC RWR+LASD R+WL
Sbjct: 43 MGEFKKWKRCNSLTSPINALDDGCLMRILSFLSPLPDRYSAAGVCYRWRHLASDPRMWLR 102
Query: 471 VKE 479
V++
Sbjct: 103 VEK 105
>gb|AAG21980.1| SKP1 interacting partner 5 [Arabidopsis thaliana]
Length = 252
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3
Query: 339 MNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNV 473
+N+LDD CLMHIL+FLSP+PDRYN A VC RWRYLA RLWL V
Sbjct: 13 LNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWLRV 57
>ref|XP_006494345.1| PREDICTED: F-box protein SKIP5-like isoform X3 [Citrus sinensis]
Length = 137
Score = 77.0 bits (188), Expect = 2e-12
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +3
Query: 300 REKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNVKE 479
+ K ++ F + +N+LDD CLMH+ +FLSP+PDRYN A VC RW YLA RLWL V +
Sbjct: 17 KSKTMKNNSFIAPINNLDDGCLMHVFSFLSPIPDRYNTALVCHRWNYLACHPRLWLRVDQ 76
>ref|XP_006494344.1| PREDICTED: F-box protein SKIP5-like isoform X2 [Citrus sinensis]
Length = 147
Score = 77.0 bits (188), Expect = 2e-12
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +3
Query: 300 REKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNVKE 479
+ K ++ F + +N+LDD CLMH+ +FLSP+PDRYN A VC RW YLA RLWL V +
Sbjct: 17 KSKTMKNNSFIAPINNLDDGCLMHVFSFLSPIPDRYNTALVCHRWNYLACHPRLWLRVDQ 76
>ref|XP_006494343.1| PREDICTED: F-box protein SKIP5-like isoform X1 [Citrus sinensis]
Length = 154
Score = 77.0 bits (188), Expect = 2e-12
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +3
Query: 300 REKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNVKE 479
+ K ++ F + +N+LDD CLMH+ +FLSP+PDRYN A VC RW YLA RLWL V +
Sbjct: 17 KSKTMKNNSFIAPINNLDDGCLMHVFSFLSPIPDRYNTALVCHRWNYLACHPRLWLRVDQ 76
>ref|XP_006420750.1| hypothetical protein CICLE_v10005678mg [Citrus clementina]
gi|557522623|gb|ESR33990.1| hypothetical protein
CICLE_v10005678mg [Citrus clementina]
Length = 258
Score = 77.0 bits (188), Expect = 2e-12
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +3
Query: 300 REKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNVKE 479
+ K ++ F + +N+LDD CLMH+ +FLSP+PDRYN A VC RW YLA RLWL V +
Sbjct: 17 KSKTMKNNSFIAPINNLDDGCLMHVFSFLSPIPDRYNTALVCHRWNYLACHPRLWLRVDQ 76
>ref|XP_006830359.1| hypothetical protein AMTR_s00116p00090490 [Amborella trichopoda]
gi|548836629|gb|ERM97775.1| hypothetical protein
AMTR_s00116p00090490 [Amborella trichopoda]
Length = 248
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Frame = +3
Query: 291 MEDREKKIRRGMFGSR---MNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRL 461
ME+++ K +R S +N+LDD CLMHI LSP+PDRYN A VCRRWR+LA RL
Sbjct: 1 MEEKQAKGKRAYCSSSSAPVNALDDGCLMHIFALLSPIPDRYNTALVCRRWRFLACHPRL 60
Query: 462 WLNVK 476
WL V+
Sbjct: 61 WLRVE 65
>ref|XP_001765023.1| predicted protein [Physcomitrella patens]
gi|162683832|gb|EDQ70239.1| predicted protein
[Physcomitrella patens]
Length = 1280
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +3
Query: 321 GMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLNV 473
G+ S M LDDACL+ ILTFL+PLPDR+NAARVC+RW+ L SD+R+WL+V
Sbjct: 8 GLQVSPMQLLDDACLVRILTFLTPLPDRFNAARVCQRWQKLVSDKRMWLHV 58
>ref|XP_006658920.1| PREDICTED: F-box protein SKIP5-like [Oryza brachyantha]
Length = 245
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/62 (56%), Positives = 41/62 (66%)
Frame = +3
Query: 291 MEDREKKIRRGMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRRLWLN 470
M R + S +NSLDD CLMHI +FLSP+PDRYN A VC RWR+LA RLWL
Sbjct: 1 MTKRGRSAAGEALASPVNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPRLWLR 60
Query: 471 VK 476
V+
Sbjct: 61 VE 62
>ref|XP_006350998.1| PREDICTED: F-box protein SKIP5-like [Solanum tuberosum]
Length = 265
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +3
Query: 291 MEDREKKIRR----GMFGSRMNSLDDACLMHILTFLSPLPDRYNAARVCRRWRYLASDRR 458
ME++++K RR S +N LDD CLMHI +FLSP+PDRYN A VC RWR+LA R
Sbjct: 1 MEEQKRKWRRISKISTDFSLINRLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPR 60
Query: 459 LWLNV 473
LWL V
Sbjct: 61 LWLRV 65