BLASTX nr result
ID: Ephedra26_contig00012618
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00012618 (1117 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mit... 271 5e-70 ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit... 271 5e-70 ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr... 270 6e-70 ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 266 1e-68 gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis] 259 2e-66 ref|XP_006843179.1| hypothetical protein AMTR_s00146p00072100 [A... 258 3e-66 ref|XP_003572398.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 257 5e-66 ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A... 255 3e-65 ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 255 3e-65 dbj|BAJ88492.1| predicted protein [Hordeum vulgare subsp. vulgare] 253 7e-65 ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit... 253 1e-64 ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 253 1e-64 ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 253 1e-64 ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 253 1e-64 gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus... 253 1e-64 ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit... 252 2e-64 gb|EMT10490.1| RNA pseudourine synthase 3, mitochondrial [Aegilo... 252 2e-64 ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit... 252 2e-64 gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob... 252 2e-64 dbj|BAD09700.1| putative ribosomal large subunit pseudouridine s... 251 4e-64 >ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform X3 [Citrus sinensis] Length = 275 Score = 271 bits (692), Expect = 5e-70 Identities = 137/285 (48%), Positives = 186/285 (65%), Gaps = 11/285 (3%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG GI++SID LA L+Y Y E PRLVHRLD+D SG+LVMGRT+ SA++LH++FRE Sbjct: 2 PVQGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFRE 61 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT S ED + L+R YWALV+GT +G I APL KVV D+ S+RI + + + Sbjct: 62 KTFSASKEDNDNEKKILQRWYWALVVGTPRCSKGVISAPLGKVVVDNGKSDRITVVNNDQ 121 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S Q AVT ++VI PS +G TWL+L P TGRKHQ+RVHCAE LG PI+GDYKYGW H+ Sbjct: 122 IMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHR 181 Query: 543 KWRPFDPISKHIESESNAE-----------ELNNGSVLSEEPLLHLHCRQISIPNITEAM 689 KW+ F P + +SN E +L +GS+L ++P LHLHC+++++PN+++A+ Sbjct: 182 KWKQFHP--SDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNVSQAI 239 Query: 690 ERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 ++ + + VAPLPSHM RSWD ++ Sbjct: 240 QKVQLSSGCDVSKLETL----------KLVAPLPSHMQRSWDVLN 274 >ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform X2 [Citrus sinensis] Length = 362 Score = 271 bits (692), Expect = 5e-70 Identities = 137/285 (48%), Positives = 186/285 (65%), Gaps = 11/285 (3%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG GI++SID LA L+Y Y E PRLVHRLD+D SG+LVMGRT+ SA++LH++FRE Sbjct: 89 PVQGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFRE 148 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT S ED + L+R YWALV+GT +G I APL KVV D+ S+RI + + + Sbjct: 149 KTFSASKEDNDNEKKILQRWYWALVVGTPRCSKGVISAPLGKVVVDNGKSDRITVVNNDQ 208 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S Q AVT ++VI PS +G TWL+L P TGRKHQ+RVHCAE LG PI+GDYKYGW H+ Sbjct: 209 IMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHR 268 Query: 543 KWRPFDPISKHIESESNAE-----------ELNNGSVLSEEPLLHLHCRQISIPNITEAM 689 KW+ F P + +SN E +L +GS+L ++P LHLHC+++++PN+++A+ Sbjct: 269 KWKQFHP--SDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNVSQAI 326 Query: 690 ERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 ++ + + VAPLPSHM RSWD ++ Sbjct: 327 QKVQLSSGCDVSKLETL----------KLVAPLPSHMQRSWDVLN 361 >ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina] gi|557524859|gb|ESR36165.1| hypothetical protein CICLE_v10028283mg [Citrus clementina] Length = 494 Score = 270 bits (691), Expect = 6e-70 Identities = 137/283 (48%), Positives = 187/283 (66%), Gaps = 9/283 (3%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG GI++SID LA L+Y Y E PRLVHRLD+D SG+LVMGRT+ SA++LH++FRE Sbjct: 221 PVQGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFRE 280 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT S ED + L+R YWALV+GT +G I APL KVV D+ S+RI + + + Sbjct: 281 KTFSASKEDNDNEKRILQRWYWALVVGTPRCSKGVISAPLRKVVVDNGKSDRITVVNNDQ 340 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S Q AVT ++VI PS +G TWL+L P TGRKHQ+RVHCAE LG PI+GDYKYGW H+ Sbjct: 341 IMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHR 400 Query: 543 KWRPFDP--ISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIPNITEAMER 695 KW+ F P ++K E+ E +L +GS+L ++P LHLHC+++++PN+++A+++ Sbjct: 401 KWKQFHPSDLNKDSNDETPKEKTLHFGLDLESGSILEKQPGLHLHCKEMTLPNVSQAIQK 460 Query: 696 PDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 + + VAPLPSHM RSWD ++ Sbjct: 461 VQLSSGCDVSKLESL----------KLVAPLPSHMQRSWDVLN 493 >ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis vinifera] gi|296090438|emb|CBI40257.3| unnamed protein product [Vitis vinifera] Length = 476 Score = 266 bits (679), Expect = 1e-68 Identities = 140/283 (49%), Positives = 186/283 (65%), Gaps = 9/283 (3%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG GI++S+D LA L Y E PRLVHRLD+D SG+L+MGRT+ SA++LH++FRE Sbjct: 203 PVQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSIFRE 262 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT S+ D + L+RRYWALVIG+ + +G I APL KVV DD SERI I + Sbjct: 263 KTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVDNVQ 322 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S+Q A+T++RVI S +G TWLEL P TGRKHQ+RVHCAE LG PI+GDYKYGW AH+ Sbjct: 323 TMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 382 Query: 543 KWRPF--DPISKHI-ESESNAE------ELNNGSVLSEEPLLHLHCRQISIPNITEAMER 695 KW+ I K++ E+ SN + +L +GS+L ++P LHLHC+Q+ +PN++ A++ Sbjct: 383 KWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQN 442 Query: 696 PDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 + FVAPLPSHM RSWD ++ Sbjct: 443 LQLSAECDLSELESL----------EFVAPLPSHMQRSWDILN 475 >gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis] Length = 470 Score = 259 bits (661), Expect = 2e-66 Identities = 135/279 (48%), Positives = 176/279 (63%), Gaps = 9/279 (3%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG GI+ S+D LAV LSY Y E PRLVHRLD+DCSG+LVMGRT+ SA++LH++FRE Sbjct: 197 PVQGGIGIKTSLDQLAVTCLSYDYTEPPRLVHRLDRDCSGILVMGRTQTSATVLHSIFRE 256 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT S+++ L+RRYWA VIG+ G I APL KVV D+ S+RI + + Sbjct: 257 KTFGASNDETVKGKIVLQRRYWAFVIGSPRHPNGLISAPLRKVVLDNGKSDRITVVNGSH 316 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S+Q A+T ++VIG S +G TWLEL P TGRKHQ+RVHCAE LG P++GDYKYGW AH+ Sbjct: 317 TLSSQHAITKYKVIGSSSHGYTWLELSPLTGRKHQLRVHCAEVLGTPMVGDYKYGWQAHR 376 Query: 543 KWRPF---DPISKHIESESNAEEL------NNGSVLSEEPLLHLHCRQISIPNITEAMER 695 W+P DP +K IE + L +NGS+ + P LHLHC+Q+ +PNI+ ++ Sbjct: 377 DWKPLHWPDPDNKCIEVLPKRKNLPFGLNMDNGSISEKHPRLHLHCKQMVLPNISHVLQN 436 Query: 696 PDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSW 812 + APLPS+M RSW Sbjct: 437 ----------VQRYSDYELSRLERLKLDAPLPSYMQRSW 465 >ref|XP_006843179.1| hypothetical protein AMTR_s00146p00072100 [Amborella trichopoda] gi|548845403|gb|ERN04854.1| hypothetical protein AMTR_s00146p00072100 [Amborella trichopoda] Length = 462 Score = 258 bits (659), Expect = 3e-66 Identities = 133/281 (47%), Positives = 179/281 (63%), Gaps = 7/281 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PV+G + S+D+LA AALS+GY EGP+LVHRLD++ SG+++MGRT ES L +LF Sbjct: 186 PVKGNLPVHNSMDALAAAALSFGYDEGPKLVHRLDRESSGIILMGRTDESFKRLRSLFNY 245 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 + +SE + R+YWALVIG+ +KQG I APL+KV+ +D +ER+++A+ Sbjct: 246 GSNGLTSESTGDRCKGAIRKYWALVIGSPKEKQGLISAPLSKVLLNDGKTERLILAYNSS 305 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 + Q+A+T++RV+GP+I GC+W+ELCP TGRKHQ+RVHCAEALG PI+GDYKYGW HK Sbjct: 306 LDGAQEAITEYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHK 365 Query: 543 KWR-----PFDPISKHIESESNAEEL--NNGSVLSEEPLLHLHCRQISIPNITEAMERPD 701 W+ FDP + L GSVLS+ PLLHLHCR++ IPNI + E+ Sbjct: 366 CWKQMPRADFDPETGKPYKMRRHHNLAVQKGSVLSKVPLLHLHCRELVIPNIEKYFEKSQ 425 Query: 702 IXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 RFVAP+PSHM SW+ MS Sbjct: 426 --------DANKPMKCKSKQDVLRFVAPMPSHMKISWNVMS 458 >ref|XP_003572398.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Brachypodium distachyon] Length = 479 Score = 257 bits (657), Expect = 5e-66 Identities = 133/282 (47%), Positives = 181/282 (64%), Gaps = 8/282 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 P++G + S+D LA AALSYG ++GP+LVHRLD+D SG+L+MGRTKES + LH LF Sbjct: 200 PMKGHLPVHNSMDVLAAAALSYGNEDGPKLVHRLDRDTSGLLLMGRTKESFTRLHWLFTS 259 Query: 183 -KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEK 359 K + +S + +RYWALVIGT + +G I APLTKV+ DD +ER+++AH Sbjct: 260 VKLARTASPIWNSACESYLQRYWALVIGTPKESEGVISAPLTKVLLDDGKAERVILAHPS 319 Query: 360 EGNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAH 539 + Q+AVT++RV+GP+I GC+W+ELCP TGRKHQ+RVHCAEALG PI+GDYKYGW H Sbjct: 320 GIDGAQEAVTEYRVMGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVH 379 Query: 540 KKWR-----PFDPISKHIESESNAE--ELNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 ++W+ F+P + E E+ GSVLS+ PLLHLHCR++ +PNI + + Sbjct: 380 QRWKQNPQPDFEPFTGEQYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSN- 438 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 RF+AP+P+HM SW+ MS Sbjct: 439 -----TGDWHDDGTPWSKEKPNLLRFIAPMPAHMKISWNIMS 475 >ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda] gi|548850328|gb|ERN08832.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda] Length = 457 Score = 255 bits (651), Expect = 3e-65 Identities = 134/280 (47%), Positives = 179/280 (63%), Gaps = 6/280 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG G++ S+D L ++L Y Y E PRLVHRLD+D SG+LVMGRT+ES +LLH++FR+ Sbjct: 186 PVQGGTGVKLSLDVLVASSLKYDYSEVPRLVHRLDQDSSGILVMGRTQESTTLLHSIFRD 245 Query: 183 KTEKFS-SEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEK 359 KT S + D LKR+YWALVIG +G I APL+K++ DD SERI ++ + Sbjct: 246 KTCGASFNVDIKNSKIILKRKYWALVIGNPQPSEGLISAPLSKLLLDDGKSERITVSEDS 305 Query: 360 EGNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAH 539 + S + A+T++RV+ S +G TWLEL P TGRKHQ+RVHCAE LG PILGDYKYGW+AH Sbjct: 306 KNKSARHAITEYRVLRSSGHGFTWLELYPRTGRKHQLRVHCAEVLGTPILGDYKYGWNAH 365 Query: 540 KKWRPFDPISKHIESESNAE-----ELNNGSVLSEEPLLHLHCRQISIPNITEAMERPDI 704 +KW+PF + E N + +L GSV ++P LHLHCRQ+++PN++ A + Sbjct: 366 RKWKPFPTLK--FEERLNRKAPFGLDLEGGSVSDKKPRLHLHCRQMTLPNMSLAFQH--- 420 Query: 705 XXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 VAPLP HM RSWD ++ Sbjct: 421 -------LHEQSVDDLSKLEKLDLVAPLPLHMRRSWDILN 453 >ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum lycopersicum] Length = 467 Score = 255 bits (651), Expect = 3e-65 Identities = 136/283 (48%), Positives = 180/283 (63%), Gaps = 9/283 (3%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG GI++S+D LA +S+ Y E PRLVHRLD+DCSG+LVMGRT+ SAS LH++FRE Sbjct: 194 PVQGGIGIKRSLDELAAKYMSHQYSEAPRLVHRLDRDCSGLLVMGRTQLSASALHSIFRE 253 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT +ED + L+++YWALVIG + G I APL K+V D+ SERI I + Sbjct: 254 KTFDSQNEDLESKKRILQKKYWALVIGCPRRSGGIISAPLGKLVLDNGKSERITIMSDVR 313 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S Q AVT++R+IG S G TWLEL P TGRKHQ+RVHCAEALG PI+GDYKYGW AH+ Sbjct: 314 EPSAQYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKYGWQAHR 373 Query: 543 KWR----PFDPISKHIESESNAEE-----LNNGSVLSEEPLLHLHCRQISIPNITEAMER 695 K + P ++ +E + L NGS+ ++P LHLHC+++ +PNI+ A++R Sbjct: 374 KLKHLPLPTSVLNLVVEIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLALQR 433 Query: 696 PDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 + + VAPLP HM +SWD +S Sbjct: 434 AQVVSDADLVDVESI----------KLVAPLPFHMQKSWDCLS 466 >dbj|BAJ88492.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 357 Score = 253 bits (647), Expect = 7e-65 Identities = 131/282 (46%), Positives = 180/282 (63%), Gaps = 8/282 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 P++G + S+D LA AALS+G +EGP+LVHRLD+D SG+L+MGRT+E + LH LF Sbjct: 78 PMKGNLPVHNSMDVLAAAALSFGNEEGPKLVHRLDRDSSGLLLMGRTREGFTRLHWLFTS 137 Query: 183 -KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEK 359 K K +S+ + +RYWALVIGT + +G I APLTKV+ DD +ER+++AH Sbjct: 138 IKLAKTASQTWNTACESYLQRYWALVIGTPTESEGVISAPLTKVLLDDGKAERVILAHPS 197 Query: 360 EGNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAH 539 + Q+AVT++RV+GP+I GC+W+EL P TGRKHQ+RVHCAEALG PI+GDYKYGW H Sbjct: 198 GIDGAQEAVTEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVH 257 Query: 540 KKWR-----PFDPISKHIESESNAE--ELNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 ++W+ F+P + E E+ GSVLS+ PLLHLHCR++ +PNI + + Sbjct: 258 QRWKQNPQPDFEPFTGEPYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSN- 316 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 RF+AP+P+HM SW+ MS Sbjct: 317 -----TGEWHDNGTPWSKEKPNLLRFIAPMPAHMKISWNIMS 353 >ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Solanum tuberosum] Length = 467 Score = 253 bits (646), Expect = 1e-64 Identities = 134/283 (47%), Positives = 179/283 (63%), Gaps = 9/283 (3%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG GI++S+D LA + + Y E PRLVHRLD+DCSG+LVMGRT+ SAS LH++FRE Sbjct: 194 PVQGGIGIKRSLDELAAKYMRHEYSEAPRLVHRLDRDCSGLLVMGRTQLSASALHSIFRE 253 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT +ED + L+++YWALVIG + G I APL K+V D+ SERI I + Sbjct: 254 KTFDSQNEDLESKKRILQKKYWALVIGCPRRSGGIISAPLGKLVLDNGKSERITIMSDVR 313 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S Q AVT++R+IG S G TWLEL P TGRKHQ+RVHCAEALG PI+GDYKYGW AH+ Sbjct: 314 APSAQYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKYGWQAHR 373 Query: 543 KWR----PFDPISKHIESESNAEE-----LNNGSVLSEEPLLHLHCRQISIPNITEAMER 695 K + P ++ ++ + L NGS+ ++P LHLHC+++ +PNI+ A++R Sbjct: 374 KLKHLPLPTSVLNLGVQIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLALQR 433 Query: 696 PDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 + + VAPLP HM +SWD +S Sbjct: 434 AQVVSDTDLVDVESI----------KLVAPLPFHMQKSWDCLS 466 >ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cicer arietinum] Length = 458 Score = 253 bits (646), Expect = 1e-64 Identities = 135/279 (48%), Positives = 178/279 (63%), Gaps = 8/279 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG I+ S+D+LA ++L+Y Y + PRLVHRLD+DCSG+LVMGRT+ S +LH++FR+ Sbjct: 185 PVQGGINIKWSLDALAASSLNYDYSQPPRLVHRLDRDCSGILVMGRTQTSTVVLHSIFRD 244 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT + S + T + L+RRYWALVIG + G I +PL KVV D+ S+RI I + Sbjct: 245 KTSRASDHNDTE-KRILQRRYWALVIGRPRRSGGLITSPLGKVVVDNGKSDRITIVNNST 303 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S+Q AVT++RV+G S G TWLEL P TGRKHQ+RVHCAE LG PI+GDYKYGW AHK Sbjct: 304 LVSSQHAVTEYRVLGSSSDGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 363 Query: 543 KWRPFDPISKHIESESNAEE--------LNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 KW FD + +E +E LN GS+ + P LHLHC+QI +PNI++A++ Sbjct: 364 KWGHFDLCNLEDSTEELLKEETLPFGLNLNKGSISDKHPRLHLHCKQIILPNISQALQ-- 421 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWD 815 D+ + A LP +M RSWD Sbjct: 422 DVQSLSASNCDLSVVEAL------KLEAELPPYMQRSWD 454 >ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis sativus] Length = 471 Score = 253 bits (646), Expect = 1e-64 Identities = 130/282 (46%), Positives = 178/282 (63%), Gaps = 8/282 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG G+++S+D LA + LSYGY E PRLVHRLD+D SG+L+MGRT S SLLH++FRE Sbjct: 204 PVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRTSTSTSLLHSVFRE 263 Query: 183 KTEKFSSEDPTMFGQK--LKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHE 356 KT + S + +K L +RYWALVIG+ + +G I APL K+V DD SE+I++ Sbjct: 264 KTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLITAPLGKIVLDDGRSEQIMVIDN 323 Query: 357 KEGNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSA 536 E Q A+T ++VI S +G TWLELCP TGRKHQ+RVHCAE LG PI+GDYKYGW A Sbjct: 324 AEPMPFQQAITQYKVI-KSHHGYTWLELCPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 382 Query: 537 HKKWRPFDPISKHIESESNAE------ELNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 HK W+PF S +++ + + +GS+ P LHLHC+Q+++P+++ A+ Sbjct: 383 HKNWKPF--CSNFHKNQGKKQFLPFGLDFESGSIAENSPRLHLHCKQLTLPDVSFALHND 440 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 + APLPS+M +SWD ++ Sbjct: 441 SLDRDCSRLECL------------ELDAPLPSYMQKSWDIIN 470 >ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis sativus] Length = 466 Score = 253 bits (646), Expect = 1e-64 Identities = 130/282 (46%), Positives = 178/282 (63%), Gaps = 8/282 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG G+++S+D LA + LSYGY E PRLVHRLD+D SG+L+MGRT S SLLH++FRE Sbjct: 199 PVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRTSTSTSLLHSVFRE 258 Query: 183 KTEKFSSEDPTMFGQK--LKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHE 356 KT + S + +K L +RYWALVIG+ + +G I APL K+V DD SE+I++ Sbjct: 259 KTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLITAPLGKIVLDDGRSEQIMVIDN 318 Query: 357 KEGNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSA 536 E Q A+T ++VI S +G TWLELCP TGRKHQ+RVHCAE LG PI+GDYKYGW A Sbjct: 319 AEPMPFQQAITQYKVI-KSHHGYTWLELCPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 377 Query: 537 HKKWRPFDPISKHIESESNAE------ELNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 HK W+PF S +++ + + +GS+ P LHLHC+Q+++P+++ A+ Sbjct: 378 HKNWKPF--CSNFHKNQGKKQFLPFGLDFESGSIAENNPRLHLHCKQLTLPDVSFALHND 435 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 + APLPS+M +SWD ++ Sbjct: 436 SLDRDCSRLECL------------ELDAPLPSYMQKSWDIIN 465 >gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris] Length = 432 Score = 253 bits (645), Expect = 1e-64 Identities = 133/282 (47%), Positives = 174/282 (61%), Gaps = 8/282 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG I+ S+D +A A L+Y Y E PRLVHRLD+DCSG+LVMGRT+ S ++LH++FRE Sbjct: 161 PVQGGINIKHSLDVVAAACLNYEYSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFRE 220 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT + + +D + L+RRYWALV+G +G + A L KVV D+ S+RI + Sbjct: 221 KTSR-ALDDTEEEKRILQRRYWALVLGRPRCSKGLVTASLGKVVVDNGKSDRITVVDNST 279 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S+Q A+T++RVI S G TWLEL P TGRKHQ+RVHCAE LG PI+GDYKYGW AH+ Sbjct: 280 SLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 339 Query: 543 KWRPFDPISKHIESESNAEE--------LNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 KW FD + E + +E LNNGS+ P LHLHC++I +PNI+EA++ Sbjct: 340 KWGNFDLSNVEDSCEEHLKEETLPFGLNLNNGSISENRPRLHLHCKKIVLPNISEALQN- 398 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 + VA LP +M RSWD S Sbjct: 399 ---------VQSFSNCDLSQVEGLQLVADLPPYMQRSWDITS 431 >ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform X2 [Glycine max] Length = 429 Score = 252 bits (644), Expect = 2e-64 Identities = 134/279 (48%), Positives = 176/279 (63%), Gaps = 8/279 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG I++S+D++A A+L+YGY + PRLVHRLD+DCSG+LVMGRT S ++LH++FRE Sbjct: 158 PVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHTSTTVLHSIFRE 217 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT + +S+D + L+RRYWALV+G + +G + A L KVV D+ S+RI I Sbjct: 218 KTSR-ASDDIGKEKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVDNST 276 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S+Q A+T++RVI S G TWLEL P TGRKHQ+RVHCAE LG PI+GDYKYGW AH+ Sbjct: 277 LMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 336 Query: 543 KWRPFD-PISKHIESESNAEE-------LNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 KW FD P + E EE LN GS+ P LHLHC+Q+ +PNI++A++ Sbjct: 337 KWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQMVLPNISQALQN- 395 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWD 815 VA LP +M RSWD Sbjct: 396 ---------VQSASSCDLSLVEELELVADLPPYMQRSWD 425 >gb|EMT10490.1| RNA pseudourine synthase 3, mitochondrial [Aegilops tauschii] Length = 368 Score = 252 bits (644), Expect = 2e-64 Identities = 131/281 (46%), Positives = 176/281 (62%), Gaps = 7/281 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 P++G + S+D LA AALSYG +EGP+LVHRLD+D SG+L+MGRT+ES + LH LF Sbjct: 100 PMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRDTSGLLLMGRTRESFTRLHWLFTS 159 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 + +RYWALVIGT + +G I APLTKV+ DD +ER+++AH Sbjct: 160 ----------IKLARTASQRYWALVIGTPTESEGIISAPLTKVLLDDGKAERVILAHPSG 209 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 + Q+AVT++RV+GP+I GC+W+EL P TGRKHQ+RVHCAEALG PI+GDYKYGW H+ Sbjct: 210 IDGAQEAVTEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQ 269 Query: 543 KWR-----PFDPISKHIESESNAE--ELNNGSVLSEEPLLHLHCRQISIPNITEAMERPD 701 +W+ F+P + E E+ GSVLS+ PLLHLHCR++ +PNI + + Sbjct: 270 RWKQNPQPDFEPFTGEPYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSN-- 327 Query: 702 IXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 RF+APLP+HM SW+ MS Sbjct: 328 ----TGEWHDNGTPWSKEKPNLLRFIAPLPAHMKISWNIMS 364 >ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform X1 [Glycine max] Length = 427 Score = 252 bits (644), Expect = 2e-64 Identities = 134/279 (48%), Positives = 176/279 (63%), Gaps = 8/279 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG I++S+D++A A+L+YGY + PRLVHRLD+DCSG+LVMGRT S ++LH++FRE Sbjct: 156 PVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHTSTTVLHSIFRE 215 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 KT + +S+D + L+RRYWALV+G + +G + A L KVV D+ S+RI I Sbjct: 216 KTSR-ASDDIGKEKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVDNST 274 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S+Q A+T++RVI S G TWLEL P TGRKHQ+RVHCAE LG PI+GDYKYGW AH+ Sbjct: 275 LMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 334 Query: 543 KWRPFD-PISKHIESESNAEE-------LNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 KW FD P + E EE LN GS+ P LHLHC+Q+ +PNI++A++ Sbjct: 335 KWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQMVLPNISQALQN- 393 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWD 815 VA LP +M RSWD Sbjct: 394 ---------VQSASSCDLSLVEELELVADLPPYMQRSWD 423 >gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao] Length = 477 Score = 252 bits (643), Expect = 2e-64 Identities = 129/283 (45%), Positives = 181/283 (63%), Gaps = 9/283 (3%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 PVQGG GI+ S+D LA A L + Y E PRLVHRLD+D SG+LVMGRT+ SA++LH++FRE Sbjct: 204 PVQGGIGIKWSLDKLAAACLCFDYSEPPRLVHRLDRDSSGILVMGRTQMSATILHSVFRE 263 Query: 183 KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEKE 362 +T S +D + L++RYWALVIG+ + +G I+APL KVV DD S+RI + + Sbjct: 264 ETNDASKDDVDNEKRILQKRYWALVIGSPRRPKGMIVAPLRKVVVDDGKSDRITVFDNSQ 323 Query: 363 GNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAHK 542 S+Q A T+++VI + +G TWLEL P TGRKHQ+RVHCAE LG PI+GDYKYGW AH+ Sbjct: 324 IVSSQRAKTEYQVIKTTSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 383 Query: 543 KWR--PFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIPNITEAMER 695 +W+ P + K + E +++GS+ ++ P LHLHCR++ PN+++A++ Sbjct: 384 RWQHLPESDLKKSSNDKCPEENMLPFGLNMDSGSISAKRPRLHLHCREMIFPNVSQALQN 443 Query: 696 PDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 + VAPLPS+M +SWD M+ Sbjct: 444 LQLSTDHDLSKLKSL----------EVVAPLPSYMQKSWDIMN 476 >dbj|BAD09700.1| putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] gi|42409169|dbj|BAD10435.1| putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] Length = 340 Score = 251 bits (641), Expect = 4e-64 Identities = 131/282 (46%), Positives = 180/282 (63%), Gaps = 8/282 (2%) Frame = +3 Query: 3 PVQGGPGIQKSIDSLAVAALSYGYKEGPRLVHRLDKDCSGVLVMGRTKESASLLHTLFRE 182 P++G + S+D LA AALSYG +EGP+LVHRLD++ SG+L+ GRTKES + LH LF Sbjct: 61 PMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKESFTRLHWLFTS 120 Query: 183 -KTEKFSSEDPTMFGQKLKRRYWALVIGTLNQKQGRIIAPLTKVVSDDKSSERILIAHEK 359 K +S+ + +RYWALVIGT +++G I APL+KV+ DD +ER+++AH Sbjct: 121 VNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHPS 180 Query: 360 EGNSTQDAVTDFRVIGPSIYGCTWLELCPFTGRKHQVRVHCAEALGMPILGDYKYGWSAH 539 + Q+AVT +RV+GP+I+GC+W+EL P TGRKHQ+RVHCAEALG PI+GDYKYGW H Sbjct: 181 GIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVH 240 Query: 540 KKWR-----PFDPISKHIESESNAE--ELNNGSVLSEEPLLHLHCRQISIPNITEAMERP 698 ++W+ F+P + E E+ GSVLS+ PLLHLHCR++ IPNI + + Sbjct: 241 QRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLS-- 298 Query: 699 DIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 824 RF+AP+P+HM SW+ MS Sbjct: 299 ----SNGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMS 336