BLASTX nr result

ID: Ephedra26_contig00012413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00012413
         (736 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY04488.1| AF4/FMR2 family member 1 [Theobroma cacao]              62   1e-07
gb|AFK43560.1| unknown [Medicago truncatula]                           59   2e-06
emb|CBI15830.3| unnamed protein product [Vitis vinifera]               57   8e-06
ref|XP_002276629.1| PREDICTED: uncharacterized protein LOC100248...    57   8e-06

>gb|EOY04488.1| AF4/FMR2 family member 1 [Theobroma cacao]
          Length = 551

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 15/144 (10%)
 Frame = +3

Query: 81  RKIEMGNHRFRLSHVMPNVWFYKLRDMGIGRNRTNGMMMNKRL--------LSNAPRKMR 236
           ++I MGN+RFRLS +MPN WFYKL+D+G  RN +N     K+L         +  P K++
Sbjct: 144 QRILMGNYRFRLSDMMPNAWFYKLKDIGRARNHSNANPSKKKLQHPVSPASTTTQPSKIK 203

Query: 237 SP-ESAIRRSFELAQRGGQTFRY------NPGFNLQYPRYQGEIXXXXXXXXXXXXXXXX 395
            P  S  R+S+   +    T R+          N  +P                      
Sbjct: 204 QPHHSYPRKSYYFTRELIPTDRFYGSPTNTKSANAHFP------DPPRKSSKKRSRKRNN 257

Query: 396 XXXXXVIDSSISAGCNCRTSVVSK 467
                ++ SS+SAGC+CR ++ +K
Sbjct: 258 RSSPKLVTSSVSAGCSCRATLWTK 281


>gb|AFK43560.1| unknown [Medicago truncatula]
          Length = 349

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
 Frame = +3

Query: 93  MGNHRFRLSHVMPNVWFYKLRDMGIGRNRTNGMMMNKR------LLSNAPRKMRSPESAI 254
           MGN++F+LS +MPN WFYKLRDMG  +N+T      K+        SN  +  +  +S  
Sbjct: 1   MGNYKFKLSDMMPNAWFYKLRDMGRTKNQTPTTQQRKKKQSSSSTTSNTSKSKQPHQSNP 60

Query: 255 RRSF----ELAQRGGQTFRYNPGFNLQYP 329
           R+S+    EL Q   + +  +P  N  +P
Sbjct: 61  RKSYYFTRELNQTNNRIYNTSPPNNTNFP 89


>emb|CBI15830.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +3

Query: 93  MGNHRFRLSHVMPNVWFYKLRDMGIGRNRTNGMMMNKRLLSNAPRKMRSPESAIRRSF 266
           MGN+RFRLS +MPN WFYKL+DM   RN      + K+L S A    ++  S  R S+
Sbjct: 42  MGNYRFRLSDMMPNAWFYKLKDMSRARNHNTAQSIKKKLPSPAATSQKTNLSQPRYSY 99


>ref|XP_002276629.1| PREDICTED: uncharacterized protein LOC100248417 [Vitis vinifera]
          Length = 387

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +3

Query: 93  MGNHRFRLSHVMPNVWFYKLRDMGIGRNRTNGMMMNKRLLSNAPRKMRSPESAIRRSF 266
           MGN+RFRLS +MPN WFYKL+DM   RN      + K+L S A    ++  S  R S+
Sbjct: 1   MGNYRFRLSDMMPNAWFYKLKDMSRARNHNTAQSIKKKLPSPAATSQKTNLSQPRYSY 58


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